BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042291
(241 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557377|ref|XP_002519719.1| conserved hypothetical protein [Ricinus communis]
gi|223541136|gb|EEF42692.1| conserved hypothetical protein [Ricinus communis]
Length = 239
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/241 (64%), Positives = 183/241 (75%), Gaps = 2/241 (0%)
Query: 1 MQSDQHFHPKRIMRPLLSQVSGDYVHIPVASPFGADLPPAANPPTPFQGVEFHPSEVCPK 60
MQSDQHF K+ + +Q +Y+H+PVAS F A P AA P G+EF PSEVCPK
Sbjct: 1 MQSDQHFRRKKAVPHFANQRGNNYMHVPVASSFPAAPPTAAKHLMPVHGIEFQPSEVCPK 60
Query: 61 NFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDS 120
NFIIFDQTDHRSQIMFHP +AH+F GP N HA+Y Q+N+ER + GREM SS KEDS
Sbjct: 61 NFIIFDQTDHRSQIMFHPTVAHRFNGPGLNMHASYFQENYEREAVDDTGREM-SSLKEDS 119
Query: 121 DDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSG 180
DDIDALLSLEE +E++E DEEEVSTART G YGS SPDS STY S+P+ SS+ KS G
Sbjct: 120 DDIDALLSLEE-EEQDECDEEEVSTARTYGNYGSSSPDSCSTYGSKPRKTGSSSVQKSPG 178
Query: 181 SSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMK 240
S S C +KRQK+KKMV LRG VPGG+++NTV VLDEAVR+LKSLKVEVQ +GVGN+K
Sbjct: 179 SGSSCSTERKRQKMKKMVKALRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKIGVGNLK 238
Query: 241 N 241
N
Sbjct: 239 N 239
>gi|268374460|gb|ACZ04445.1| bHLH1 transcription factor [Hevea brasiliensis]
Length = 241
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 148/242 (61%), Positives = 180/242 (74%), Gaps = 2/242 (0%)
Query: 1 MQSDQHFHPKRIMRPLLSQVSGDYVHIPVASPFGADLPPAANPPTPFQGVEFHPSEVCPK 60
MQSDQ F P + + +Q +Y+HIPVA F A LPP P G+EF PSEVCPK
Sbjct: 1 MQSDQQFQPNKAVPHFANQRGNNYMHIPVAPSFAAALPPTGKHLMPAHGIEFQPSEVCPK 60
Query: 61 NFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERHDATNVGREM-ASSFKED 119
NFIIFDQ DHRSQIMFHPA+AHKF GP N + +Y +NF+R + + RE+ +SS KED
Sbjct: 61 NFIIFDQNDHRSQIMFHPAVAHKFSGPGLNMYGSYNPENFDREEINGIEREVSSSSLKED 120
Query: 120 SDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSS 179
SDDIDALLSLEE DE++EYDEEEVSTART G +GS+SPDS ST S+P N SS+ SS
Sbjct: 121 SDDIDALLSLEE-DEQDEYDEEEVSTARTYGNHGSNSPDSYSTCGSKPWKNGSSSIQNSS 179
Query: 180 GSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
G+ S ++ +KRQK+KKMV LRG VPGG+++NTV V+DEAVR+LKSLKVEVQ +G GN
Sbjct: 180 GNGSSINSERKRQKMKKMVKALRGIVPGGDQMNTVMVIDEAVRYLKSLKVEVQKIGAGNF 239
Query: 240 KN 241
KN
Sbjct: 240 KN 241
>gi|147767796|emb|CAN76054.1| hypothetical protein VITISV_036406 [Vitis vinifera]
Length = 289
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/242 (61%), Positives = 179/242 (73%), Gaps = 3/242 (1%)
Query: 1 MQSDQHFHPKRIMRPLLSQVSGDYVH-IPVASPFGADLPPAANPPTPFQGVEFHPSEVCP 59
MQ DQ F P+++M PL ++V DY++ PV S FGA PP A PF GVEF PS+VCP
Sbjct: 46 MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 105
Query: 60 KNFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKED 119
KNFIIFDQTDHRSQIMFHPAIA KF PS N ATYI +N E+ + E +S+ KED
Sbjct: 106 KNFIIFDQTDHRSQIMFHPAIAQKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKED 165
Query: 120 SDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQ-HNKFSSMLKS 178
S+DIDALLSLEE D+EE DEEEVSTART G YGS+ D+ S+Y S+P+ SS+LKS
Sbjct: 166 SEDIDALLSLEEEDQEEY-DEEEVSTARTHGNYGSNCEDTCSSYGSKPRKIKLSSSILKS 224
Query: 179 SGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
S S S C++ +KRQK+KKMV LRG VPG +++NTV VLDEAVR+LKSLKVEVQ LGV N
Sbjct: 225 SSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLGVSN 284
Query: 239 MK 240
K
Sbjct: 285 SK 286
>gi|225463438|ref|XP_002275393.1| PREDICTED: transcription factor bHLH144 isoform 2 [Vitis vinifera]
gi|225463440|ref|XP_002275365.1| PREDICTED: transcription factor bHLH144 isoform 1 [Vitis vinifera]
Length = 244
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/242 (61%), Positives = 181/242 (74%), Gaps = 3/242 (1%)
Query: 1 MQSDQHFHPKRIMRPLLSQVSGDYVH-IPVASPFGADLPPAANPPTPFQGVEFHPSEVCP 59
MQ DQ F P+++M PL ++V DY++ PV S FGA PP A PF GVEF PS+VCP
Sbjct: 1 MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 60
Query: 60 KNFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKED 119
KNFIIFDQTDHRSQIMFHPAIA KF PS N ATYI +N E+ + E +S+ KED
Sbjct: 61 KNFIIFDQTDHRSQIMFHPAIAQKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKED 120
Query: 120 SDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQ-HNKFSSMLKS 178
S+DIDALLSLEE +++EEYDEEEVSTART G YGS+ D+ S+Y S+P+ SS+LKS
Sbjct: 121 SEDIDALLSLEE-EDQEEYDEEEVSTARTHGNYGSNCEDTCSSYGSKPRKIKLSSSILKS 179
Query: 179 SGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
S S S C++ +KRQK+KKMV LRG VPG +++NTV VLDEAVR+LKSLKVEVQ LGV N
Sbjct: 180 SSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLGVSN 239
Query: 239 MK 240
K
Sbjct: 240 SK 241
>gi|224114345|ref|XP_002316733.1| predicted protein [Populus trichocarpa]
gi|222859798|gb|EEE97345.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 171/229 (74%), Gaps = 2/229 (0%)
Query: 13 MRPLLSQVSGDYVHIPVASPFGADLPPAANPPTPFQGVEFHPSEVCPKNFIIFDQTDHRS 72
M PL +QV + +H PVA+ F A P AA P G+EF SE+CP+NFIIFDQ DHRS
Sbjct: 1 MPPLTNQVDNNNMHFPVATTFAAVQPLAAKHLMPVHGIEFQSSEICPRNFIIFDQADHRS 60
Query: 73 QIMFHPAIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDSDDIDALLSLEEG 132
Q+M++PA+AH GP FN HATYIQ+NFER D NV RE++SS KEDSDDIDAL+SLEE
Sbjct: 61 QVMYNPAVAHNHGGPDFNIHATYIQENFERTDTYNVEREISSSLKEDSDDIDALMSLEEE 120
Query: 133 DEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQ 192
+ EE D EEVSTARTC YGS SPDS S+Y ++P N SS+ K S S S ++ +KRQ
Sbjct: 121 EPEEC-DGEEVSTARTCRNYGSSSPDSCSSYGAKPMKNG-SSVQKCSSSGSSSNSERKRQ 178
Query: 193 KLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
K+K MV LRG VPGG+++NTV VLDEAVR+LKSLKVEVQ LGVGN KN
Sbjct: 179 KMKTMVKTLRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKLGVGNFKN 227
>gi|449433686|ref|XP_004134628.1| PREDICTED: transcription factor bHLH144-like isoform 1 [Cucumis
sativus]
gi|449433688|ref|XP_004134629.1| PREDICTED: transcription factor bHLH144-like isoform 2 [Cucumis
sativus]
gi|449433690|ref|XP_004134630.1| PREDICTED: transcription factor bHLH144-like isoform 3 [Cucumis
sativus]
gi|449530105|ref|XP_004172037.1| PREDICTED: transcription factor bHLH144-like [Cucumis sativus]
Length = 249
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 167/246 (67%), Gaps = 5/246 (2%)
Query: 1 MQSDQHFHPKRIMRPLLSQVSGDYVHIPVASPFGADLPPAANPPTPFQGVEFHPSEVCPK 60
MQSD +F+ K+ P +Q +++ IP++S F + LPP PF VEF PSEVCP+
Sbjct: 4 MQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQ 63
Query: 61 NFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDS 120
NFIIFD TD+RSQIMFHPA+A+K GP+ N + YIQ NF +D + RE++S ED
Sbjct: 64 NFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLMEDL 123
Query: 121 DDIDALLSLEEGDEE--EEYDEEEVSTARTCGIYGSD--SPDSTSTYDSEPQHN-KFSSM 175
DDIDALLSLE + E + +++EVSTAR+ YG+ S+STY S+P+ N F+ +
Sbjct: 124 DDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPV 183
Query: 176 LKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLG 235
KSS S S C++ K+ KLKKMV LR +PGG ++ TV VLDEAV++LKSLK EVQ LG
Sbjct: 184 HKSSSSGSSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLG 243
Query: 236 VGNMKN 241
VG ++N
Sbjct: 244 VGGLEN 249
>gi|356512179|ref|XP_003524798.1| PREDICTED: transcription factor bHLH144-like [Glycine max]
Length = 237
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 157/237 (66%), Gaps = 3/237 (1%)
Query: 1 MQSDQHFHPKRIMRPLLSQVSGDYVHIPVASPFGADLPPAANPPTPFQGVEFHPSEVCPK 60
MQ+ ++F P +++ PL + ++ P+AS F A LPP TPF+ PSE CPK
Sbjct: 1 MQTQEYFLPDKMVLPLADEAIDPHMRAPLASAFDAYLPPGVRQITPFERFNVQPSEACPK 60
Query: 61 NFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDS 120
NF+IFDQTD RS+IMFHPA+ +KF P N HAT QD FE++ A + RE++S F+ED
Sbjct: 61 NFVIFDQTDQRSRIMFHPAMTYKFNSPGLNVHATGSQD-FEKNKANQMEREVSSPFEEDP 119
Query: 121 DDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSG 180
+DIDALLS+ + ++ DEEEVSTART Y S S +S + + SS+ KSSG
Sbjct: 120 NDIDALLSIGVDELDDF-DEEEVSTARTQENYESLSDTCSSYCSKSRKRSSSSSVQKSSG 178
Query: 181 SSSKCHNGKKRQKLKKMVNVLRGFVP-GGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+ CHN K ++K+MV +LR VP GGN++++V VLDEAV++LKSLKVEV+ GV
Sbjct: 179 AGGFCHNEGKHWEMKRMVRMLRKIVPGGGNQMDSVAVLDEAVKYLKSLKVEVEQFGV 235
>gi|356524955|ref|XP_003531093.1| PREDICTED: transcription factor bHLH144-like [Glycine max]
Length = 239
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 164/240 (68%), Gaps = 7/240 (2%)
Query: 1 MQSDQHFHPKRIMRPLLSQVSGDYVHIPVASPFGADLPPAANPPTPFQGVEFHPSEVCPK 60
MQ+ ++F P ++ PL + ++H P+AS F A LPP TP + + PSE CPK
Sbjct: 1 MQTREYFLPDKMGLPLADETIDPHMHAPLASTFDAYLPPGVRQITPIERFKLLPSEACPK 60
Query: 61 NFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDS 120
NF+IFDQTD +S+IMFHPA+ +KF PS + HAT QD FE++ + RE++S+F+ED
Sbjct: 61 NFVIFDQTDQQSRIMFHPAMTYKFDSPSLHAHATGSQD-FEKNKVNQMERELSSAFEEDP 119
Query: 121 DDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTY---DSEPQHNKFSSMLK 177
+DIDALLS+ DE E++DEEEVSTART Y S S D+ S+Y + + + SS+ K
Sbjct: 120 NDIDALLSI-GADELEDFDEEEVSTARTREKYESLS-DTCSSYCSKSRKKRSSSSSSVQK 177
Query: 178 SSGSSSKCHNGKKRQKLKKMVNVLRGFVP-GGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
SSG+ CHN K Q++K+MV +LR VP GGN++++V VL+EAV++LKSLKVEV+ V
Sbjct: 178 SSGAGGYCHNEGKHQEIKRMVRMLRKIVPDGGNQMDSVAVLNEAVKYLKSLKVEVEQFRV 237
>gi|357476411|ref|XP_003608491.1| Transcription factor bHLH144 [Medicago truncatula]
gi|355509546|gb|AES90688.1| Transcription factor bHLH144 [Medicago truncatula]
Length = 238
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 150/219 (68%), Gaps = 6/219 (2%)
Query: 22 GDYVHIPVASPFGADLPPAANPPTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIA 81
G Y+++ AS F A LPP+A TPF+ PSEVCPKNFI+FDQTD +++I+FHPA
Sbjct: 22 GTYMNLSHASTFDAVLPPSARQITPFERFNLQPSEVCPKNFIVFDQTDQQNRILFHPATT 81
Query: 82 HKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEE 141
+KF P FN HAT QD FE+ + E++SSF EDS DIDALLSL+ + E+ DEE
Sbjct: 82 YKFNSPGFNSHATCNQD-FEKDKINQMETELSSSFVEDSKDIDALLSLDSDELEDY-DEE 139
Query: 142 EVSTARTCGIYGSDSPDSTSTYDSEPQHNK-FSSMLKSSGSSSKCHNGKKRQ-KLKKMVN 199
EVSTART S S D+ S+Y ++ + + SS SSG+ C + KK+ ++K+MV
Sbjct: 140 EVSTARTHEKDDSTS-DTCSSYCTKSRKKRLLSSAHNSSGTKGYCISEKKQHLEMKRMVK 198
Query: 200 VLRGFVP-GGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
+LR VP GGN+++TV VLDEAV++LKSLKVEV+ GVG
Sbjct: 199 ILRNIVPGGGNQMDTVTVLDEAVKYLKSLKVEVEQFGVG 237
>gi|357476409|ref|XP_003608490.1| Transcription factor bHLH144 [Medicago truncatula]
gi|355509545|gb|AES90687.1| Transcription factor bHLH144 [Medicago truncatula]
Length = 262
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 150/219 (68%), Gaps = 6/219 (2%)
Query: 22 GDYVHIPVASPFGADLPPAANPPTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIA 81
G Y+++ AS F A LPP+A TPF+ PSEVCPKNFI+FDQTD +++I+FHPA
Sbjct: 46 GTYMNLSHASTFDAVLPPSARQITPFERFNLQPSEVCPKNFIVFDQTDQQNRILFHPATT 105
Query: 82 HKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEE 141
+KF P FN HAT QD FE+ + E++SSF EDS DIDALLSL+ + E+ DEE
Sbjct: 106 YKFNSPGFNSHATCNQD-FEKDKINQMETELSSSFVEDSKDIDALLSLDSDELEDY-DEE 163
Query: 142 EVSTARTCGIYGSDSPDSTSTYDSEPQHNK-FSSMLKSSGSSSKCHNGKKRQ-KLKKMVN 199
EVSTART S S D+ S+Y ++ + + SS SSG+ C + KK+ ++K+MV
Sbjct: 164 EVSTARTHEKDDSTS-DTCSSYCTKSRKKRLLSSAHNSSGTKGYCISEKKQHLEMKRMVK 222
Query: 200 VLRGFVP-GGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
+LR VP GGN+++TV VLDEAV++LKSLKVEV+ GVG
Sbjct: 223 ILRNIVPGGGNQMDTVTVLDEAVKYLKSLKVEVEQFGVG 261
>gi|297845916|ref|XP_002890839.1| hypothetical protein ARALYDRAFT_473207 [Arabidopsis lyrata subsp.
lyrata]
gi|297336681|gb|EFH67098.1| hypothetical protein ARALYDRAFT_473207 [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 144/231 (62%), Gaps = 16/231 (6%)
Query: 25 VHIPVAS--PFGADLPPAANPPTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAH 82
+H P AS F A PP A P+ GVE PS VCPKNF+IFDQT RSQ+M+HP + H
Sbjct: 18 MHNPYASGSSFDALFPPCAK--LPYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTH 75
Query: 83 KFMG-PSFNFHATYIQDNFERHDATNVG---REMASSFKEDSDDIDALLSLEEGDEEEEY 138
K M PS N A+ Q+ + N G +E +SS++ED ++IDALLS +E E+++
Sbjct: 76 KLMNTPSLNNLASTFQNEYSGGSYGNYGNYDQEASSSYQEDPNEIDALLSADEDYEDDDN 135
Query: 139 D------EEEVSTARTCGI-YGSDSPDST-STYDSEPQHNKFSSMLKSSGSSSKCHNGKK 190
+ EEVSTAR YG+ S +S S+Y +N S SGS+S ++GK
Sbjct: 136 EADEDGDSEEVSTARNSSRDYGNTSAESCCSSYGYNNNNNNNSRKQSLSGSASSNNDGKG 195
Query: 191 RQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
R+K+KKM+ VLR VPGG ++NT VLDEAV++LKSLK+E Q LGVG+ N
Sbjct: 196 RKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 246
>gi|108709600|gb|ABF97395.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125544695|gb|EAY90834.1| hypothetical protein OsI_12439 [Oryza sativa Indica Group]
gi|125586994|gb|EAZ27658.1| hypothetical protein OsJ_11606 [Oryza sativa Japonica Group]
gi|215678773|dbj|BAG95210.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 122/213 (57%), Gaps = 39/213 (18%)
Query: 44 PTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKF--MGPSFNFHATYIQDNFE 101
P P GVEF PS+ CPKN++IFDQT RS++MFHP++A+ G ++ H FE
Sbjct: 65 PAPLTGVEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNLGNSGGGYDHHHHCGYGGFE 124
Query: 102 RHDAT---------NVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIY 152
+ A+ + G + KED+D+IDAL+S E+G+EE++ +ST RT G
Sbjct: 125 QDYASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDV----LSTGRTPGCR 180
Query: 153 GSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKK---------RQKLKKMVNVLRG 203
SPDST + S S S C G+K ++++KKM+ L+G
Sbjct: 181 AGGSPDSTCS---------------SGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKG 225
Query: 204 FVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+PGG+ ++T VLDEAVR+LKSLKVEV+ LGV
Sbjct: 226 IIPGGDRMDTPAVLDEAVRYLKSLKVEVKKLGV 258
>gi|125544694|gb|EAY90833.1| hypothetical protein OsI_12438 [Oryza sativa Indica Group]
Length = 263
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 121/213 (56%), Gaps = 39/213 (18%)
Query: 44 PTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKF--MGPSFNFHATYIQDNFE 101
P P GVEF PS+ CPKN++IFDQT RS++MFHP++A+ G ++ H FE
Sbjct: 65 PAPLTGVEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNLGNSGGGYDHHHHCGYGGFE 124
Query: 102 RHDAT---------NVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIY 152
+ A+ + G + KED+D+IDAL+S E+G+EE++ +ST RT G
Sbjct: 125 QDYASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDV----LSTGRTPGCR 180
Query: 153 GSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKK---------RQKLKKMVNVLRG 203
SPDST + S S S C G+K ++++KKM+ L+G
Sbjct: 181 AGGSPDSTCS---------------SGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKG 225
Query: 204 FVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+PGG+ ++T VLDEAVR+LKSLKVEV+ LG
Sbjct: 226 IIPGGDRMDTPAVLDEAVRYLKSLKVEVKKLGA 258
>gi|37991892|gb|AAR06338.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 121/212 (57%), Gaps = 39/212 (18%)
Query: 44 PTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKF--MGPSFNFHATYIQDNFE 101
P P GVEF PS+ CPKN++IFDQT RS++MFHP++A+ G ++ H FE
Sbjct: 65 PAPLTGVEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNLGNSGGGYDHHHHCGYGGFE 124
Query: 102 RHDAT---------NVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIY 152
+ A+ + G + KED+D+IDAL+S E+G+EE++ +ST RT G
Sbjct: 125 QDYASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDV----LSTGRTPGCR 180
Query: 153 GSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKK---------RQKLKKMVNVLRG 203
SPDST + S S S C G+K ++++KKM+ L+G
Sbjct: 181 AGGSPDSTCS---------------SGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKG 225
Query: 204 FVPGGNELNTVGVLDEAVRHLKSLKVEVQNLG 235
+PGG+ ++T VLDEAVR+LKSLKVEV+ LG
Sbjct: 226 IIPGGDRMDTPAVLDEAVRYLKSLKVEVKKLG 257
>gi|9972351|gb|AAG10601.1|AC008030_1 Unknown protein [Arabidopsis thaliana]
gi|12324164|gb|AAG52051.1|AC022455_5 unknown protein; 14666-16092 [Arabidopsis thaliana]
Length = 285
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 145/234 (61%), Gaps = 19/234 (8%)
Query: 25 VHIPVAS--PFGADLPPAANPPTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAH 82
+H P AS + A PP A P+ GVE PS VCPKNF+IFDQT RSQ+M+HP + H
Sbjct: 52 MHNPYASGSSYDALFPPCAK--LPYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTH 109
Query: 83 KFMG-PSFNFHATYIQDNFERHDATNVG---REMASSFKEDSDDIDALLSLEE------- 131
K M PS N A+ Q+ + N G +E++SS++ED ++IDALLS +E
Sbjct: 110 KLMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSADEDYEENDD 169
Query: 132 -GDEEEEYDEEEVSTARTCGI-YGSDSPDST-STYDSEPQHNKFSSMLKSSGSSSKCHN- 187
EE+ D EEVSTART YG+ + +S S+Y +N S SGS+S +N
Sbjct: 170 NEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNND 229
Query: 188 GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
GK R+K+KKM+ VLR VPGG ++NT VLDEAV++LKSLK+E Q LGVG+ N
Sbjct: 230 GKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 283
>gi|18397297|ref|NP_564342.1| transcription factor bHLH144 [Arabidopsis thaliana]
gi|42571693|ref|NP_973937.1| transcription factor bHLH144 [Arabidopsis thaliana]
gi|75308016|sp|Q9ASX9.1|BH144_ARATH RecName: Full=Transcription factor bHLH144; AltName: Full=Basic
helix-loop-helix protein 144; Short=AtbHLH144;
Short=bHLH 144; AltName: Full=Transcription factor EN
130; AltName: Full=bHLH transcription factor bHLH144
gi|13605563|gb|AAK32775.1|AF361607_1 F1N18.24/F1N18.24 [Arabidopsis thaliana]
gi|18491145|gb|AAL69541.1| F1N18.24/F1N18.24 [Arabidopsis thaliana]
gi|110741245|dbj|BAF02173.1| hypothetical protein [Arabidopsis thaliana]
gi|227202688|dbj|BAH56817.1| AT1G29950 [Arabidopsis thaliana]
gi|332193032|gb|AEE31153.1| transcription factor bHLH144 [Arabidopsis thaliana]
gi|332193033|gb|AEE31154.1| transcription factor bHLH144 [Arabidopsis thaliana]
Length = 251
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 145/234 (61%), Gaps = 19/234 (8%)
Query: 25 VHIPVAS--PFGADLPPAANPPTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAH 82
+H P AS + A PP A P+ GVE PS VCPKNF+IFDQT RSQ+M+HP + H
Sbjct: 18 MHNPYASGSSYDALFPPCAK--LPYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTH 75
Query: 83 KFMG-PSFNFHATYIQDNFERHDATNVG---REMASSFKEDSDDIDALLSLEE------- 131
K M PS N A+ Q+ + N G +E++SS++ED ++IDALLS +E
Sbjct: 76 KLMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSADEDYEENDD 135
Query: 132 -GDEEEEYDEEEVSTARTCGI-YGSDSPDST-STYDSEPQHNKFSSMLKSSGSSSKCHN- 187
EE+ D EEVSTART YG+ + +S S+Y +N S SGS+S +N
Sbjct: 136 NEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNND 195
Query: 188 GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
GK R+K+KKM+ VLR VPGG ++NT VLDEAV++LKSLK+E Q LGVG+ N
Sbjct: 196 GKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249
>gi|115445769|ref|NP_001046664.1| Os02g0315600 [Oryza sativa Japonica Group]
gi|46389916|dbj|BAD15700.1| unknown protein [Oryza sativa Japonica Group]
gi|113536195|dbj|BAF08578.1| Os02g0315600 [Oryza sativa Japonica Group]
gi|125539170|gb|EAY85565.1| hypothetical protein OsI_06938 [Oryza sativa Indica Group]
gi|125581839|gb|EAZ22770.1| hypothetical protein OsJ_06445 [Oryza sativa Japonica Group]
gi|215734958|dbj|BAG95680.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741357|dbj|BAG97852.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741414|dbj|BAG97909.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 254
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 117/203 (57%), Gaps = 31/203 (15%)
Query: 44 PTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERH 103
P P +EF PS CPKN++IFDQT +S++MFHP++AHKF G S + + H
Sbjct: 68 PAPMNELEFQPSATCPKNYVIFDQTCTKSRVMFHPSLAHKFGGGSSAYDNN-VYGGGGAH 126
Query: 104 DAT------NVGREMASSF----KEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYG 153
DA +VG + S KED+D+IDALLS E+GDE++ VST RT G
Sbjct: 127 DAAKGAYRDSVGYDDDDSCSVRQKEDTDEIDALLSSEDGDEDDV-----VSTGRTPG--- 178
Query: 154 SDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNT 213
Y + S G + G+K++++KKMV L+G +PGGN+++T
Sbjct: 179 ---------YRDGSSPDSTCSSSYGGG---QARPGRKKERMKKMVRTLKGIIPGGNQMDT 226
Query: 214 VGVLDEAVRHLKSLKVEVQNLGV 236
VLDEAVR+LKSLKVEV+ LGV
Sbjct: 227 PAVLDEAVRYLKSLKVEVKKLGV 249
>gi|357135599|ref|XP_003569396.1| PREDICTED: transcription factor bHLH144-like [Brachypodium
distachyon]
Length = 245
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 21/233 (9%)
Query: 15 PLLSQVSGDYVHIPV-ASPFGADLPPAANPPTPFQGVEFHPSEVCPKNFIIFDQTDHRSQ 73
PL Q S P P G +P P P G EF PS+V P+NFIIFD + + +
Sbjct: 28 PLGGQCSSRASVSPAFGVPAGMTVPQL---PNPLGGFEFQPSKVFPRNFIIFDHNEDKGR 84
Query: 74 IMFHPAIAHKFMGPSFNFHATYIQDNFER--HDATNVGREMASSFKEDSDDIDALLSLEE 131
IM+HP +A+K + N +Y Q D N+ E +SSFKED+ +IDALLS
Sbjct: 85 IMYHPTLANKLNAANINAFPSYDQAVCRSCGQDNGNL-EENSSSFKEDTREIDALLS--- 140
Query: 132 GDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKK- 190
EE +++ VST RT + S S DS+ST +S+ M SS SS H +
Sbjct: 141 -SSEESDNDDVVSTGRTPYAFESVSLDSSSTLNSK-------KMRYSSEKSSGIHGSMED 192
Query: 191 --RQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
+ ++KM+ VLRG +PG ++L+T VL+EAVR+LK LK+E + LGV ++ N
Sbjct: 193 VTHESMRKMITVLRGVIPGADQLDTPAVLEEAVRYLKFLKMEAKKLGVDDLDN 245
>gi|242093086|ref|XP_002437033.1| hypothetical protein SORBIDRAFT_10g019120 [Sorghum bicolor]
gi|241915256|gb|EER88400.1| hypothetical protein SORBIDRAFT_10g019120 [Sorghum bicolor]
Length = 233
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 117/201 (58%), Gaps = 17/201 (8%)
Query: 44 PTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKFM----GPSFNFHATYIQDN 99
P P G+EF PS+ CPKN++IFDQT RS++MFHP++A+ F G ++ H + N
Sbjct: 37 PAPLTGLEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNFGSSAGGYDYDRHCYGYEQN 96
Query: 100 FERHDATNVGREMASSF----KEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSD 155
+ A + KED+D+IDAL+S E+G++E++ +ST RT G
Sbjct: 97 YAGKSAYYGCGDDGGGASIRQKEDTDEIDALMSTEDGEDEDDV----LSTGRTPGCRAGG 152
Query: 156 SPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVG 215
SPDST + + + C KK++++KKMV L+G +PGG+ ++T
Sbjct: 153 SPDSTCS-----SGYAATGGGGAKHEMGGCGGEKKKERMKKMVRTLKGIIPGGDRMDTPA 207
Query: 216 VLDEAVRHLKSLKVEVQNLGV 236
VLDEAVR+LKSLKVEV+ LG
Sbjct: 208 VLDEAVRYLKSLKVEVKKLGA 228
>gi|219362395|ref|NP_001136920.1| uncharacterized protein LOC100217078 [Zea mays]
gi|194696182|gb|ACF82175.1| unknown [Zea mays]
gi|194697626|gb|ACF82897.1| unknown [Zea mays]
gi|413954334|gb|AFW86983.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413954335|gb|AFW86984.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
gi|413954336|gb|AFW86985.1| putative HLH DNA-binding domain superfamily protein isoform 3 [Zea
mays]
Length = 264
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 115/205 (56%), Gaps = 22/205 (10%)
Query: 44 PTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKFM----GPSFNFHATYIQDN 99
P P G+EF PS+ CPKN++IFDQT RS++MFHP++A+ F G + H
Sbjct: 65 PAPLTGLEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNFGSSAGGYDYGNHCYGYDQT 124
Query: 100 FERHDA--------TNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGI 151
+ A ++ KED+D+IDAL+S EEGDEE++ +ST RT G
Sbjct: 125 YPGESAYHGCGDDAGAGAGGVSVRQKEDTDEIDALMSTEEGDEEDDV----LSTGRTPGC 180
Query: 152 YGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNEL 211
SPDST + ++ ++ G K ++++KKMV L+G +PGG+ +
Sbjct: 181 RAGGSPDSTCSSGGYAGNSSGGRKHETGGGEKK------KERMKKMVRTLKGIIPGGDRM 234
Query: 212 NTVGVLDEAVRHLKSLKVEVQNLGV 236
+T VLDEAVR+LKSLKVEV+ G
Sbjct: 235 DTPAVLDEAVRYLKSLKVEVKKAGA 259
>gi|242096204|ref|XP_002438592.1| hypothetical protein SORBIDRAFT_10g022460 [Sorghum bicolor]
gi|241916815|gb|EER89959.1| hypothetical protein SORBIDRAFT_10g022460 [Sorghum bicolor]
Length = 270
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 115/209 (55%), Gaps = 30/209 (14%)
Query: 44 PTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKF-MGPSFNF------HATYI 96
P P G+EF PS+ CPKN++IFDQT RS++MFHP++A+ F P+ + + Y
Sbjct: 71 PAPLTGLEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNFGSSPAGGYDYGSHCYGGYD 130
Query: 97 QDNFERHDATNVGREMASSF--------KEDSDDIDALLSLEEGDEEEEYDEEEVSTART 148
Q + A + + KED+D+IDAL+S E+GD+E++ +ST RT
Sbjct: 131 QSYYPGESAYHGCGGDDGAVGGGVSVRQKEDTDEIDALMSTEDGDDEDDV----LSTGRT 186
Query: 149 CGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKM-VNVLRGFVPG 207
G SPDST + S G + G+K+++ K V L+G +PG
Sbjct: 187 PGCRAGGSPDSTCS----------SGGYAGGGRKHETGGGEKKKERMKKMVRTLKGIIPG 236
Query: 208 GNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
G+ ++T VLDEAVR+LKSLKVEV+ G
Sbjct: 237 GDRMDTPAVLDEAVRYLKSLKVEVKKAGA 265
>gi|115438701|ref|NP_001043630.1| Os01g0626900 [Oryza sativa Japonica Group]
gi|54290253|dbj|BAD61185.1| unknown protein [Oryza sativa Japonica Group]
gi|54290353|dbj|BAD61157.1| unknown protein [Oryza sativa Japonica Group]
gi|113533161|dbj|BAF05544.1| Os01g0626900 [Oryza sativa Japonica Group]
gi|125526921|gb|EAY75035.1| hypothetical protein OsI_02932 [Oryza sativa Indica Group]
gi|125571244|gb|EAZ12759.1| hypothetical protein OsJ_02677 [Oryza sativa Japonica Group]
gi|215701144|dbj|BAG92568.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 245
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 121/220 (55%), Gaps = 24/220 (10%)
Query: 26 HIPVASPFGADLPPAANPP---TPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAH 82
+PV+ FGA P P T G EF PS+VCP+NFIIFDQTD + +IM HPA+
Sbjct: 36 RVPVSPAFGA--PSGMTSPQLRTSLGGFEFQPSKVCPRNFIIFDQTDDKGRIMCHPALVS 93
Query: 83 KFMGPSFNFHATYIQDNFERHDATNVG--REMASSFKEDSDDIDALLSLEEGDEEEEYDE 140
K + N +Y + R + G E++SSFKED+ +IDALLS +E +E++
Sbjct: 94 KLNPSATNAFPSY-PEPICRSSGQDNGNLEEVSSSFKEDTREIDALLSSDEESDEDDVK- 151
Query: 141 EEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGK----KRQKLKK 196
ST RT PD + + S + S S S +G ++++
Sbjct: 152 ---STGRT--------PDCFESDSLDSSSPPRSRKMHHSSSQSSVFHGSMDTVTHERMRN 200
Query: 197 MVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
MV VLRG +PGG++L+T V++EAVR+LK LK+E + LGV
Sbjct: 201 MVTVLRGIIPGGDQLDTASVIEEAVRYLKFLKMEAKKLGV 240
>gi|357143503|ref|XP_003572944.1| PREDICTED: transcription factor bHLH144-like [Brachypodium
distachyon]
Length = 268
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 116/210 (55%), Gaps = 34/210 (16%)
Query: 45 TPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKFMG----PSFNFHATYIQDNF 100
P +EF PSE CPKN++IFDQT +S++MFHP++A+KF G ++ +
Sbjct: 70 APLNELEFQPSETCPKNYVIFDQTCTKSRVMFHPSLANKFGGNGGASEYDNYYGAPGSGG 129
Query: 101 ERHDATNVGREM-------------ASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTAR 147
+DA G+ M + KED+D+IDALL ++GDE++ VST R
Sbjct: 130 NAYDAAAAGKSMYNKDRDYDADMSCSVRHKEDTDEIDALLCSDDGDEDDV-----VSTGR 184
Query: 148 TCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKM-VNVLRGFVP 206
T G D + SS S S S+C G+K+++ K V L+G +P
Sbjct: 185 TPGYR-----------DGSSPDSCSSSYGGGSKSRSECTGGRKKKERMKKMVRTLKGIIP 233
Query: 207 GGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
GGN+++T VLDEAV++LKSLKVEV+ LGV
Sbjct: 234 GGNQMDTPAVLDEAVKYLKSLKVEVKKLGV 263
>gi|413935583|gb|AFW70134.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|413943836|gb|AFW76485.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 226
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 23/187 (12%)
Query: 47 FQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKFMGPSFNF-HATYIQDNFERHDA 105
G+EF PS+ CP+N++IFDQT RS++M+HP++ P+ NF H Y H
Sbjct: 51 LTGLEFEPSDTCPRNYVIFDQTYDRSRVMYHPSL------PADNFDHQGYYSGESAYHGG 104
Query: 106 TNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDS 165
G + KED+D+IDAL+S E+ ++ +++ +ST RT G + SPDST +
Sbjct: 105 GGSGGSVRQ--KEDTDEIDALMSTED-GGGDDDEDDVLSTGRTPGCRAAGSPDSTCSSGG 161
Query: 166 EPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNT-VGVLDEAVRHL 224
+H + KK++++KKMV L+G +PGG+ ++T VLDEAVR+L
Sbjct: 162 GRKHE------------APAGGEKKKERVKKMVRTLKGIIPGGDRMDTPAAVLDEAVRYL 209
Query: 225 KSLKVEV 231
KSLKVEV
Sbjct: 210 KSLKVEV 216
>gi|226495211|ref|NP_001145247.1| uncharacterized protein LOC100278531 [Zea mays]
gi|195653633|gb|ACG46284.1| hypothetical protein [Zea mays]
Length = 226
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 23/187 (12%)
Query: 47 FQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKFMGPSFNF-HATYIQDNFERHDA 105
G+EF PS+ CP+N++IFDQT RS++M+HP++ P+ NF H Y H
Sbjct: 51 LTGLEFEPSDTCPRNYVIFDQTYDRSRVMYHPSL------PADNFDHQGYYSGESAYHGG 104
Query: 106 TNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDS 165
G + KED+D+IDAL+S E+ ++ +++ +ST RT G + SPDST +
Sbjct: 105 GGSGGSVRQ--KEDTDEIDALMSTED-GGGDDDEDDVLSTGRTPGCRAAVSPDSTCSSGG 161
Query: 166 EPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNT-VGVLDEAVRHL 224
+H + KK++++KKMV L+G +PGG+ ++T VLDEAVR+L
Sbjct: 162 GRKHE------------APAGGEKKKERVKKMVRTLKGIIPGGDRMDTPAAVLDEAVRYL 209
Query: 225 KSLKVEV 231
KSLKVEV
Sbjct: 210 KSLKVEV 216
>gi|242058101|ref|XP_002458196.1| hypothetical protein SORBIDRAFT_03g028550 [Sorghum bicolor]
gi|241930171|gb|EES03316.1| hypothetical protein SORBIDRAFT_03g028550 [Sorghum bicolor]
Length = 245
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 114/198 (57%), Gaps = 19/198 (9%)
Query: 45 TPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATY--IQDNFER 102
+P E PS+VCP+NFIIFD TD + IM+HPA+ + + + + +
Sbjct: 56 SPLDAFELQPSKVCPRNFIIFDHTDEKGCIMYHPALVNNLNPANIDLLQCHGEVVCRSSG 115
Query: 103 HDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTST 162
D N+ E +SSFKED+++IDALLS ++ +++ VST RT PD +
Sbjct: 116 QDNGNL-EEQSSSFKEDTEEIDALLS----SNDDSDEDDVVSTGRT--------PDPLES 162
Query: 163 YDSEPQH-NKFSSMLKSSGSSSKCHNGKKR---QKLKKMVNVLRGFVPGGNELNTVGVLD 218
SE +F ++ + SG+SS C + +K++ + VL+G +PGG++L+T VL+
Sbjct: 163 GPSESSSLPRFKTISQVSGNSSVCSGSLENVTHEKIRNVATVLKGIIPGGDQLDTSSVLE 222
Query: 219 EAVRHLKSLKVEVQNLGV 236
EAVR+LK LK+E + LG+
Sbjct: 223 EAVRYLKFLKMESKKLGM 240
>gi|226493830|ref|NP_001142297.1| uncharacterized protein LOC100274466 [Zea mays]
gi|194708082|gb|ACF88125.1| unknown [Zea mays]
gi|238008516|gb|ACR35293.1| unknown [Zea mays]
gi|413944071|gb|AFW76720.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413944072|gb|AFW76721.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 270
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 118/215 (54%), Gaps = 41/215 (19%)
Query: 44 PTPFQGVEFHPSEVCPKNFIIFDQTDHRSQIMFHPAIAHKFMGP-----------SFNFH 92
P P G+EF S+ CPKN++IFD T RS++MFHP++A+ F +
Sbjct: 70 PAPLTGLEFQASDTCPKNYVIFDHTYDRSRVMFHPSLANNFASSPAAGGGGGYDYDRQCY 129
Query: 93 ATYIQDNFERHDATNVGREMASSF---------KEDSDDIDALLSLEEGDEEEEYDEEEV 143
Y Q N+ A V A+ KED+D+IDAL+S E+G+++++ ++ +
Sbjct: 130 GGYDQ-NYAGKSAYYVCAAAAADDDGGGASIRQKEDTDEIDALMSTEDGEDDDD--DDVL 186
Query: 144 STARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSG--SSSKCHNGKKRQKLKKMVNVL 201
ST RT G + SPDST SSG ++ KK++++KKMV L
Sbjct: 187 STGRTPGCRAAGSPDSTC----------------SSGYAAAGAGGGEKKKERMKKMVRTL 230
Query: 202 RGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+G +PG + ++T VLDEAVR+LKSLKVEV+ LG
Sbjct: 231 KGIIPGVDRMDTPAVLDEAVRYLKSLKVEVKKLGA 265
>gi|312282945|dbj|BAJ34338.1| unnamed protein product [Thellungiella halophila]
Length = 223
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 71 RSQIMFHPAIAHKFMG-PSFNFHATYIQDNFERHDATNVGR-EMASSFKEDSDDIDALLS 128
RSQ+M+HP + H+ PS N A+ Q + N G+ E++SS +ED ++IDALLS
Sbjct: 42 RSQVMYHPELTHRLASSPSLNGLASKFQSEYVGESFGNYGQQEVSSSHQEDPNEIDALLS 101
Query: 129 LEEGDEEEEYD-------EEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGS 181
+E E+ + D EEVSTAR ++ S S + SGS
Sbjct: 102 TDEDYEDGDDDENEDGGDSEEVSTARNSYRDNGNASAEESCCSSSYGYKSSKKKQSLSGS 161
Query: 182 SSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
+S ++GK R+K+KKM+ VLR VPGG ++NT VLDEAV++LKSLK+E Q LGVG+ N
Sbjct: 162 ASCNNDGKGRKKMKKMMGVLRRIVPGGEDMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 221
>gi|51969404|dbj|BAD43394.1| unknown protein [Arabidopsis thaliana]
Length = 44
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
VLR VPGG ++NT VLDEAV++LKSLK+E Q LGVG+ N
Sbjct: 1 VLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 42
>gi|147836191|emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera]
Length = 402
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 62/244 (25%)
Query: 55 SEVCPKNFIIFDQTDHRSQIMF----------------HPAIAHKFMGPSFNFHATYIQD 98
SE K F++FDQ+ ++ ++F P+ AH G I
Sbjct: 156 SECAQKRFLVFDQSGDQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYH 215
Query: 99 N---FERHDATNVGREMASSFKEDSDDIDALL------SLEEGDEEEE----------YD 139
N G ++ S ED+++++ALL S E DEE YD
Sbjct: 216 QGPILTDESNENGGTDVQSEMHEDTEELNALLYSDDEYSYSEDDEETSTGHSPSTMTVYD 275
Query: 140 EEEVSTARTCGIYGSDSPDST-----------STYDSEPQHNKFSSMLKSSGSSSKCHNG 188
+E + SD + S D+ +S+ + S C +G
Sbjct: 276 RQEWLEGEAEEVASSDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADG 335
Query: 189 K----------------KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++ ++++ VN+L+ +PGG + + VLDEA+ +LKSLK++ +
Sbjct: 336 NNPEPGEIQSFSGNKRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAK 395
Query: 233 NLGV 236
LG+
Sbjct: 396 ALGL 399
>gi|359492922|ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH145-like
[Vitis vinifera]
Length = 421
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 62/244 (25%)
Query: 55 SEVCPKNFIIFDQTDHRSQIMF----------------HPAIAHKFMGPSFNFHATYIQD 98
SE K F++FDQ+ ++ ++F P+ AH G I
Sbjct: 175 SECAQKRFLVFDQSGDQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYH 234
Query: 99 N---FERHDATNVGREMASSFKEDSDDIDALL------SLEEGDEEEE----------YD 139
N G ++ S ED+++++ALL S E DEE YD
Sbjct: 235 QGPILTDESNENGGTDVQSEMHEDTEELNALLYSDDEYSYSEDDEETSTGHSPSTMTVYD 294
Query: 140 EEEVSTARTCGIYGSDSPDST-----------STYDSEPQHNKFSSMLKSSGSSSKCHNG 188
+E + SD + S D+ +S+ + S C +G
Sbjct: 295 RQEWLEGEAEEVASSDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADG 354
Query: 189 K----------------KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++ ++++ VN+L+ +PGG + + VLDEA+ +LKSLK++ +
Sbjct: 355 NNPEPGEIQSFSGNKRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAK 414
Query: 233 NLGV 236
LG+
Sbjct: 415 ALGL 418
>gi|302771387|ref|XP_002969112.1| hypothetical protein SELMODRAFT_409950 [Selaginella moellendorffii]
gi|300163617|gb|EFJ30228.1| hypothetical protein SELMODRAFT_409950 [Selaginella moellendorffii]
Length = 275
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 115 SFKEDSDDIDALLSLEEGDEEE--EYDEEEVSTART-----CGIYGSDSPDSTSTYDSEP 167
S++E++DD+DAL+ E DEEE E + V++A T G+ S S D +
Sbjct: 139 SWQENTDDLDALM---ESDEEEVSELNSASVTSALTREDHSGGVELSGYLSSEGETDGKG 195
Query: 168 QHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSL 227
+ ++ S + S S++ +RQ +K + VLR +PGG + VL+E +R++ SL
Sbjct: 196 RSSRRSRDCRLSVRSTRSSKKSRRQTIKYKIQVLRNIIPGGAGMEAASVLEETIRYITSL 255
Query: 228 K 228
+
Sbjct: 256 E 256
>gi|224067023|ref|XP_002302331.1| predicted protein [Populus trichocarpa]
gi|222844057|gb|EEE81604.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 89/253 (35%)
Query: 60 KNFIIFDQTDHRSQIMF----------------HPAIA----HKFMGPSFN--FHATYIQ 97
K F++FDQ+ ++ ++F P IA + G N FH I
Sbjct: 126 KRFLVFDQSGDQTTLIFSSGIGTPAQCLKSWIPKPTIAFDLNKEVTGAKENQSFHLGPIS 185
Query: 98 -DNFERHDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDS 156
D F D G EM + ED ++++ALL D++ +Y E+E T+ S
Sbjct: 186 TDEFVEDD----GIEMQTDVHEDIEELNALLY---SDDDSDYTEDEEVTST------GHS 232
Query: 157 PDSTSTYDSEPQHNKFSSMLKSSGSS---------------------------------- 182
P++ +T+D + + + SS S
Sbjct: 233 PNTMTTHDKRDWFDGSTEDVASSDGSNKKRKLFDGGYIDGPSLMDTARSVKPTRDFEYED 292
Query: 183 ---SKCHNGK----------------KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRH 223
S+C NG +++++++ V++L+ +PGG + V VL+EA+++
Sbjct: 293 DAESRCDNGTNLMSEEMGSESVNKRMRKERIRETVSILQNLIPGGKGKDAVIVLEEAIQY 352
Query: 224 LKSLKVEVQNLGV 236
LKSLK E + LG+
Sbjct: 353 LKSLKFEAKALGL 365
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL-GVGN 238
++R+K+ + V L VPGGN+L+T +LDEA+R +K L+++VQ L VGN
Sbjct: 395 QRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEAVGN 445
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL-GVGN 238
++R+K+ + V L VPGGN+L+T +LDEA+R +K L+++VQ L VGN
Sbjct: 395 QRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEAVGN 445
>gi|302784356|ref|XP_002973950.1| hypothetical protein SELMODRAFT_414431 [Selaginella moellendorffii]
gi|300158282|gb|EFJ24905.1| hypothetical protein SELMODRAFT_414431 [Selaginella moellendorffii]
Length = 283
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 115 SFKEDSDDIDALLSLEEGDEEE--EYDEEEVSTART-----CGIYGSDSPDSTSTYDSEP 167
S++E++DD+DAL+ E DEEE E + V++ T G+ S S D +
Sbjct: 143 SWQENTDDLDALM---ESDEEEVSELNSASVTSDLTREDHSGGVELSGYLSSEGETDGKG 199
Query: 168 QHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSL 227
+ ++ S + S S++ +RQ +K + VLR +PGG + VL+E +R++ SL
Sbjct: 200 RSSRRSRDCRLSVRSTRSSKKSRRQTIKYKIQVLRNIIPGGAGMEAASVLEETIRYITSL 259
Query: 228 KVEVQN 233
+ V++
Sbjct: 260 ESMVRS 265
>gi|15240599|ref|NP_199812.1| transcription factor bHLH145 [Arabidopsis thaliana]
gi|75170387|sp|Q9FGB0.1|BH145_ARATH RecName: Full=Transcription factor bHLH145; AltName: Full=Basic
helix-loop-helix protein 145; Short=AtbHLH145;
Short=bHLH 145; AltName: Full=Transcription factor EN
131; AltName: Full=bHLH transcription factor bHLH145
gi|10177212|dbj|BAB10287.1| unnamed protein product [Arabidopsis thaliana]
gi|26449412|dbj|BAC41833.1| unknown protein [Arabidopsis thaliana]
gi|28950883|gb|AAO63365.1| At5g50010 [Arabidopsis thaliana]
gi|332008500|gb|AED95883.1| transcription factor bHLH145 [Arabidopsis thaliana]
Length = 311
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 43/235 (18%)
Query: 37 LPP----AANPPTPFQGVEFHPSEVCP-KNFIIFDQTDHRSQIMFHPAIAHKFMGPSFNF 91
LPP P GV E C K F++FDQ+ ++ ++ I F +
Sbjct: 79 LPPQNQCMKQVPLQVDGVISKAEEQCSQKRFLVFDQSGDQTTLLLASDIRKSF--ETLKQ 136
Query: 92 HAT-YIQDNFERHDA-TNVGREMASS----FKEDSDDIDALLSLEEGDEEEEY--DEEEV 143
HA +++ +R + V M + KEDS++++ALL E+ E Y +E+EV
Sbjct: 137 HACPDMKEELQRSNKDLFVCHGMQGNSEPDLKEDSEELNALLYSED---ESGYCSEEDEV 193
Query: 144 STA-RTCGIYGSDSPDSTSTYDS--EPQHNKFSSMLKSSGSSSK--------CHNGK--- 189
++A + I S D + S +P + K +L++S S + C N +
Sbjct: 194 TSADHSPSIVVSGREDQKTFLGSYGQPLNAKKRKILETSNESMRDAESSCGSCDNTRISF 253
Query: 190 -KRQKLK----------KMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQN 233
KR KL + V++LR VPG ++ + V+D A+ +LKSLK+E +N
Sbjct: 254 LKRSKLSSNKIGEEKIFETVSLLRSVVPGEELVDPILVIDRAIDYLKSLKMEAKN 308
>gi|255545906|ref|XP_002514013.1| transcription factor, putative [Ricinus communis]
gi|223547099|gb|EEF48596.1| transcription factor, putative [Ricinus communis]
Length = 424
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 35/47 (74%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+++K++ VN+L+ +PGG + + VLDEA+ +LKSLKV+ + LG+
Sbjct: 375 RKEKIRDTVNILQNIIPGGKGKDAIVVLDEAIGYLKSLKVKAKALGL 421
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + V VL+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 171 RRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL-GVGNMKN 241
+R+++ V VL+ FVPGG +++T +LDEA+ ++K L+ ++Q L +GNM +
Sbjct: 400 RRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQQLQTLERIGNMSD 452
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + V VL+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 171 RRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + V VL+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 170 RRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 214
>gi|255563232|ref|XP_002522619.1| transcription factor, putative [Ricinus communis]
gi|223538095|gb|EEF39706.1| transcription factor, putative [Ricinus communis]
Length = 394
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 67/244 (27%)
Query: 57 VCPKNFIIFDQTDHRSQIM---FHPAIAHKFMGPSFNFHATYI--QDNFERHDATNV--- 108
C + F+IFDQ+ + ++++ F P A + S +Y+ +++ + D N+
Sbjct: 151 ACQRKFVIFDQSGNETRLIYSSFFPTGAKPTIAASRPTAGSYLRSEEHAAKLDGINLIMP 210
Query: 109 ------------GREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTA------RTCG 150
G E S ED+++IDALL + ++++ D+E +ST R G
Sbjct: 211 KLQEVSDENYFSGEE--SEMHEDTEEIDALL-YSDDNDDDYDDDEVISTGHSPSLIRNYG 267
Query: 151 IYGSDSPDSTSTYDSEPQHN---------KFSSMLKSSGSS--------------SKCHN 187
+ G + DS+ Q+ K SS+ ++GS+ S C
Sbjct: 268 MRGQVEEITEEVTDSDGQNKRQKLLDGGYKRSSLTDTAGSTKVAMAHGYDCDDAESSCAI 327
Query: 188 GK---------------KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
G+ K+ K++ + +L +PG + + + VLD A+ +LKSLK+ +
Sbjct: 328 GQNHKELRLANLGKEQLKKDKIRATLKILESIIPGVKDKDPLLVLDVAIDYLKSLKLSAK 387
Query: 233 NLGV 236
LGV
Sbjct: 388 TLGV 391
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + V VL+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 171 RRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|224286131|gb|ACN40776.1| unknown [Picea sitchensis]
Length = 484
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 35/45 (77%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+++K+KK +N+LR VP G+ ++T VL+ A +HLKSL+++++ L
Sbjct: 428 RKEKVKKAINLLRSIVPEGHSMDTAAVLEVASQHLKSLQLKLERL 472
>gi|148908917|gb|ABR17563.1| unknown [Picea sitchensis]
Length = 484
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 35/45 (77%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+++K+KK +N+LR VP G+ ++T VL+ A +HLKSL+++++ L
Sbjct: 428 RKEKVKKAINLLRSIVPEGHSMDTAAVLEVASQHLKSLQLKLERL 472
>gi|222625055|gb|EEE59187.1| hypothetical protein OsJ_11123 [Oryza sativa Japonica Group]
Length = 359
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
++R+++++ V LR VPGG + VLDEA+ +LK LK++V+ LG ++
Sbjct: 309 RRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLGAVSL 359
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 36/52 (69%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
+R+K+ + + VL +PGGN+++T +LDEA+ ++K L+++VQ L + N
Sbjct: 398 RRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQILESDTLDN 449
>gi|115453363|ref|NP_001050282.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|40539023|gb|AAR87280.1| expressed protein (with alternative splicing) [Oryza sativa
Japonica Group]
gi|108708576|gb|ABF96371.1| expressed protein [Oryza sativa Japonica Group]
gi|108708577|gb|ABF96372.1| expressed protein [Oryza sativa Japonica Group]
gi|113548753|dbj|BAF12196.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|215686766|dbj|BAG89616.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 315
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
++R+++++ V LR VPGG + VLDEA+ +LK LK++V+ LG ++
Sbjct: 265 RRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLGAVSL 315
>gi|218192968|gb|EEC75395.1| hypothetical protein OsI_11883 [Oryza sativa Indica Group]
Length = 414
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
++R+++++ V LR VPGG + VLDEA+ +LK LK++V+ LG ++
Sbjct: 364 RRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLGAVSL 414
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 163 RRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 207
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + VL+ VPGGN+++T +LDEA +LK LK +VQ L
Sbjct: 294 RRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 338
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEAV ++K LK +VQ L
Sbjct: 124 RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTL 168
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + VL+ VPGGN+++T +LDEA +LK LK +VQ L
Sbjct: 293 RRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 337
>gi|242035575|ref|XP_002465182.1| hypothetical protein SORBIDRAFT_01g033470 [Sorghum bicolor]
gi|241919036|gb|EER92180.1| hypothetical protein SORBIDRAFT_01g033470 [Sorghum bicolor]
Length = 314
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
++R+++++ V LR VPGG + VLDEA+ +L+ LK++V+ LG ++
Sbjct: 264 RRRERIQETVAALRNIVPGGIAKDATAVLDEAICYLQYLKLKVKTLGAVSL 314
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL-GVGN 238
+R+++ + VL+ VPGG +++T +LDEA+ ++K LK+++Q L +GN
Sbjct: 450 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQTLEQIGN 499
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV---QNLG 235
++R+++ + VL+G VPGG++++T +LDEA +LK L+ +V +NLG
Sbjct: 215 QRRERISDRIRVLQGMVPGGSKMDTASMLDEAANYLKFLRSQVKALENLG 264
>gi|449470078|ref|XP_004152745.1| PREDICTED: transcription factor bHLH145-like [Cucumis sativus]
gi|449521814|ref|XP_004167924.1| PREDICTED: transcription factor bHLH145-like [Cucumis sativus]
Length = 482
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 182 SSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
SS + +++K+++ V +L +PGG + VLDEA+++LKSL+++ + G+
Sbjct: 424 SSSINKKIRKEKIRETVGILESLIPGGKGKEAIVVLDEAIQYLKSLRLKAETFGL 478
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
K+R+K+ K + L+ +P N+++ +LD+A+ +LK+LK+++Q + +GN
Sbjct: 337 KRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQLQIMSMGN 386
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+R+++ + VL+ VPGG++++T +LDEA +LK L+ +VQ L GN
Sbjct: 296 RRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQALETGN 344
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 43 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQL 87
>gi|297792281|ref|XP_002864025.1| transcription factor/ transcription regulator [Arabidopsis lyrata
subsp. lyrata]
gi|297309860|gb|EFH40284.1| transcription factor/ transcription regulator [Arabidopsis lyrata
subsp. lyrata]
Length = 303
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 34/150 (22%)
Query: 116 FKEDSDDIDALLSLEEGDEEEEYDEEEVSTA---------------RTCGIYGS------ 154
KED+++++ALL EG+ + +E+EV+++ G YG
Sbjct: 158 LKEDTEELNALL-YSEGESDYCSEEDEVTSSDHSPSIVVSAHEGQKAFLGSYGQSLNAKK 216
Query: 155 ---------DSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFV 205
+ D+ S+ S N S LK S +SSK +K+ + V++LR V
Sbjct: 217 RKTLETSNENMRDAESSCGSCDNDNTGISFLKRSKTSSK---KIGEEKIFETVSLLRSIV 273
Query: 206 PGGNELNTVGVLDEAVRHLKSLKVEVQNLG 235
PG ++ + V+D A+ +LKSLK+EV+N G
Sbjct: 274 PGEELVDPILVIDRAIDYLKSLKMEVKNRG 303
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 127 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + VL+ VPGG++++T +LDEA +LK LK +VQ L
Sbjct: 304 RRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 348
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 106 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQL 150
>gi|224093318|ref|XP_002309879.1| predicted protein [Populus trichocarpa]
gi|222852782|gb|EEE90329.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 36/213 (16%)
Query: 58 CPKNFIIFDQTDHRSQIMF--------HPAIAHKFMGPSF----NFHATYIQDNFERHDA 105
C + F IFDQ+ + ++M+ P A P + + A Q + H+
Sbjct: 117 CQRRFFIFDQSGNEKRLMYSSFGLTVPKPTTADAKPIPGYFNYKEYAAKMDQMKLKLHEV 176
Query: 106 TN----VGREMASSFKEDSDDIDALLSLEEGDE-EEEYDEEEVSTARTC---GIYGSDSP 157
++ G E + ED+++I+A + E+ +E EE + R G Y SP
Sbjct: 177 SDENHFSGEE--TEMHEDTEEINAHGTQEQVEEITEEVTSSDGPNKRQKLIDGGYKKSSP 234
Query: 158 DSTST-------------YDSEPQHNKFSSMLKSSGSSSKCHNGKKRQ-KLKKMVNVLRG 203
T++ YDS+ + + G S + + R+ K+ + +L
Sbjct: 235 VDTASSVKVERFLGYDNGYDSDMGSSYAIGQTQKEGMVSILGSKQFRKDKIHATLKILES 294
Query: 204 FVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+PG + VLDEA+ +LKSLK++ + LGV
Sbjct: 295 IIPGAKNKEPLLVLDEAINYLKSLKLKAKTLGV 327
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 175 RRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 219
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 85 MGPSFNFHATYIQDNFERHDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVS 144
M P+ N H +D R V + A E + ++ S +E + +++
Sbjct: 349 MAPAVNLHHEMDRDRAGR--TMRVHKTEARKAPEATVATSSVCSGNGAGSDELWRQQK-- 404
Query: 145 TARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSS-------KCHN---GKKRQKL 194
R C S D EP +L+ SG+ S + HN ++R ++
Sbjct: 405 --RKCQAQAECSASQDDDLDDEP------GVLRKSGTRSTKRSRTAEVHNLSERRRRDRI 456
Query: 195 KKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+ + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 457 NEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGT 500
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 35/45 (77%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK ++++L
Sbjct: 52 RRERISEKIRILQRLVPGGRKMDTASMLDEAIRYVKFLKRQIRSL 96
>gi|356498829|ref|XP_003518251.1| PREDICTED: transcription factor bHLH145-like [Glycine max]
Length = 429
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 36/47 (76%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+++K++ ++++L+ VPGG + + + +LDEA+R LKSLK++ LG+
Sbjct: 379 RKEKIQDVLSILQCIVPGGKDKDPIELLDEAIRCLKSLKLKAIELGL 425
>gi|288901043|gb|ADC68234.1| bHLH transcription factor [Brassica oleracea]
Length = 180
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + +L+ VPGG +++T +LDEA+R+ K LK +V+ L
Sbjct: 111 RRRERISEKIRILKRMVPGGAKMDTASMLDEAIRYTKFLKRQVRLL 156
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+ ++K LK +VQ L
Sbjct: 148 RRERISERIKILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 192
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
+R+++ + + VL+ VPGG+ ++T +LDEA +LK LK +V+ L N N
Sbjct: 302 RRERVSERLRVLQRLVPGGSRMDTASMLDEAASYLKFLKTQVKALERANPSN 353
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 147 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 191
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 116 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKKQIRLL 160
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 132 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIKLL 176
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + VL+ VPGG++++T +LDEA +LK LK +VQ L
Sbjct: 303 RRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 347
>gi|237692500|gb|ACR15952.1| INDEHISCENT [Lepidium campestre]
gi|342298436|emb|CBY05408.1| INDEHISCENT-like protein [Lepidium campestre]
Length = 176
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + +L+ VPGG +++T +LDEA+R+ K LK +V+ L
Sbjct: 106 RRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 151
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 142 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 186
>gi|297742516|emb|CBI34665.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+K+ + +VLR VP N++N V VLD+ + +LK LK V+ L
Sbjct: 351 KRREKINERFSVLRSLVPSINQVNKVSVLDDTIEYLKELKRRVEEL 396
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 37/53 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R+++ + + VL+ VPGG +++T +LDEA +L+ LK ++++L + +N
Sbjct: 349 QRRERISERLRVLQRLVPGGAKMDTASMLDEAASYLRFLKAQIRDLQTLDRRN 401
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 155 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 199
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL-GVGN 238
+R+++ + + VL+ VPGG++++T +LDEA +LK L+ +V+ L +GN
Sbjct: 352 RRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGN 401
>gi|359474203|ref|XP_002270239.2| PREDICTED: transcription factor GLABRA 3-like [Vitis vinifera]
Length = 633
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+K+ + +VLR VP N++N V VLD+ + +LK LK V+ L
Sbjct: 441 KRREKINERFSVLRSLVPSINQVNKVSVLDDTIEYLKELKRRVEEL 486
>gi|297810171|ref|XP_002872969.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
gi|297318806|gb|EFH49228.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + +L+ VPGG +++T +LDEA+R+ K LK +V+ L
Sbjct: 128 RRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 173
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + +L+ VPGG +++T +LDEA+R+ K LK +V+ L
Sbjct: 129 RRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 174
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 176 LKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
+K S ++K HN K+R K+ + + L+ +P N+++ +LD+A+ +LK+LK+++Q
Sbjct: 203 VKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQ 262
Query: 233 NLGVG 237
+ +G
Sbjct: 263 IMSMG 267
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + VL+ VPGG++++T +LDEA +LK LK +VQ L
Sbjct: 293 RRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 337
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 22/170 (12%)
Query: 79 AIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEY 138
+ A M P+ N H +D R V + A E + ++ S +E +
Sbjct: 215 STAAAPMAPAVNLHHEMGRDRAGR--TMPVHKTEARKAPEATVATSSVCSGNGAGSDELW 272
Query: 139 DEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSS-------KCHN---G 188
+++ R C S D EP +L+ SG+ S + HN
Sbjct: 273 RQQK----RKCQAQAECSASQDDDLDDEP------GVLRKSGTRSTKRSRTAEVHNLSER 322
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 323 RRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGT 372
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 111 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 155
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 176 LKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
+K S ++K HN K+R K+ + + L+ +P N+++ +LD+A+ +LK+LK+++Q
Sbjct: 203 VKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQ 262
Query: 233 NLGVG 237
+ +G
Sbjct: 263 IMSMG 267
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL-GVGN 238
++R+++ + VL+ VPGG++++T +LDEA +LK L+ +V+ L +GN
Sbjct: 402 QRRERISDRIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGN 452
>gi|357111958|ref|XP_003557777.1| PREDICTED: transcription factor bHLH145-like [Brachypodium
distachyon]
Length = 320
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 192 QKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
+K+++ V LR VPGG + VLDEA+ +L SLK++V+ LG ++
Sbjct: 273 EKIQETVAALRKIVPGGIAKDATTVLDEAISYLTSLKLKVKTLGAVSL 320
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 136 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRFL 180
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 85 MGPSFNFHATYIQDNFERHDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVS 144
M P+ N H +D R V + A E + ++ S +E + +++
Sbjct: 293 MAPAVNLHHEMGRDRAGR--TMPVHKTEARKAPEATVATSSVCSGNGAGSDELWRQQK-- 348
Query: 145 TARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSS-------KCHN---GKKRQKL 194
R C S D EP +L+ SG+ S + HN ++R ++
Sbjct: 349 --RKCQAQAECSASQDDDLDDEP------GVLRKSGTRSTKRSRTAEVHNLSERRRRDRI 400
Query: 195 KKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+ + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 401 NEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGT 444
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + VL+ VPGG +++T +LDEA +LK L+ +V+ L
Sbjct: 288 QRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 333
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 85 MGPSFNFHATYIQDNFERHDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVS 144
M P+ N H +D R V + A E + ++ S +E + +++
Sbjct: 361 MAPAVNLHHEMGRDRAGR--TMPVHKTEARKAPEATVATSSVCSGNGAGSDELWRQQK-- 416
Query: 145 TARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSS-------KCHN---GKKRQKL 194
R C S D EP +L+ SG+ S + HN ++R ++
Sbjct: 417 --RKCQAQAECSASQDDDLDDEP------GVLRKSGTRSTKRSRTAEVHNLSERRRRDRI 468
Query: 195 KKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+ + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 469 NEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGT 512
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + VL+ VPGG +++T +LDEA +LK L+ +V+ L
Sbjct: 286 QRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + +L+ VPGG +++T +LDEA+ ++K LK +VQ +
Sbjct: 301 RRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAM 345
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 147 RTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGS-SSKCHN---GKKRQKLKKMVNVLR 202
R+C + S D EP + S+ + S +++ HN ++R ++ + + L+
Sbjct: 226 RSCHLAADCSVSPDEDMDDEPGATRRSAARSAKRSRTAEVHNMSERRRRDRINEKMRALQ 285
Query: 203 GFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+P N+++ +L+EA+ +LK+L+++VQ + +G
Sbjct: 286 ELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGT 321
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
K+R K+ + + L+ +P N+ + +LDEA+ +LK L+++VQ L V N
Sbjct: 104 KRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMN 153
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + VL+ VPGG +++T +LDEA +LK L+ +V+ L
Sbjct: 315 QRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 360
>gi|413955365|gb|AFW88014.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413955366|gb|AFW88015.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 316
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 194 LKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
+++ V LR VPGG + VLDEA+ +L+ LK++V+ LG ++
Sbjct: 271 IQETVAALRNIVPGGTAKDATAVLDEAICYLQYLKLKVKTLGAASL 316
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
K+R K+ + + L+ +P N+ + +LDEA+ +LK L+++VQ L V N
Sbjct: 104 KRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMN 153
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R+++ + VL+ VPGG +++T +LDEA +L+ LK +V++L + +N
Sbjct: 383 QRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRDLQTLDRRN 435
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 149 CGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGS----SSKCHN---GKKRQKLKKMVNVL 201
CG G +S + SEP+ + SGS +++ HN ++R ++ + + L
Sbjct: 70 CGELGGGFYESEAGGSSEPEPHSSERPRGGSGSKRTRAAEVHNLSEKRRRSRINEKMKAL 129
Query: 202 RGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 130 QSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 166
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
K+R K+ + + L+ +P N+ + +LDEA+ +LK L+++VQ L V N
Sbjct: 104 KRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMN 153
>gi|342298424|emb|CBY05402.1| INDEHISCENT-like protein [Lepidium appelianum]
Length = 172
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + +L+ VPGG ++++ +LDEA+R+ K LK +V+ L
Sbjct: 102 RRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRML 147
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 158 DSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTV 214
D T + E + + S+ +++ HN K+R ++ + + L+ +P N+ +
Sbjct: 261 DETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKA 320
Query: 215 GVLDEAVRHLKSLKVEVQNLGVG 237
+LDEA+ ++KSL++++Q + +G
Sbjct: 321 SMLDEAIEYMKSLQLQIQMMSMG 343
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R+++ + VL+ VPGG +++T +LDEA +L+ LK +V++L + +N
Sbjct: 329 QRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRDLQTLDRRN 381
>gi|356552949|ref|XP_003544822.1| PREDICTED: transcription factor bHLH145-like [Glycine max]
Length = 378
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 36/47 (76%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+++K++ ++++L+ VPGG + + + ++DEA+R LKSLK++ LG+
Sbjct: 328 RKEKIQDVLSILQCIVPGGKDKDPIELIDEAIRCLKSLKLKAIELGL 374
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+ ++K LK ++++L
Sbjct: 189 RRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKSL 233
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 158 DSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTV 214
D T + E + + S+ +++ HN K+R ++ + + L+ +P N+ +
Sbjct: 190 DETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKA 249
Query: 215 GVLDEAVRHLKSLKVEVQNLGVG 237
+LDEA+ ++KSL++++Q + +G
Sbjct: 250 SMLDEAIEYMKSLQLQIQMMSMG 272
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 158 DSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTV 214
D T + E + + S+ +++ HN K+R ++ + + L+ +P N+ +
Sbjct: 261 DETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKA 320
Query: 215 GVLDEAVRHLKSLKVEVQNLGVG 237
+LDEA+ ++KSL++++Q + +G
Sbjct: 321 SMLDEAIEYMKSLQLQIQMMSMG 343
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R K+ + + L+ +P N+ + +LDEA+ +LK L+++VQ L V N
Sbjct: 102 RRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMVRN 151
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + VL+ VPGG +++T +LDEA+ ++K LK ++Q L
Sbjct: 381 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYIKFLKQQLQTL 425
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL-GVGN 238
+R+++ + + VL+ VPGG++++T +LDEA +LK L+ +V+ L +GN
Sbjct: 350 RRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGN 399
>gi|288901045|gb|ADC68235.1| bHLH transcription factor [Brassica rapa subsp. pekinensis]
Length = 171
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 33/44 (75%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R+++ + + +L+ VPGG +++T +LDEA+R+ K LK +V+
Sbjct: 114 RRRERISEKIRILKRMVPGGAKMDTASMLDEAIRYTKFLKRQVR 157
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + +L+ VPGG +++T +LDEA+ ++K LK +VQ +
Sbjct: 302 RRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAM 346
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 179 SGSSSKCHNG--------KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVE 230
+G SS+ H+G ++R K+ + + L+ VPG ++ N LD+ + ++KSL+ +
Sbjct: 157 AGGSSRSHHGEAHNLTEKRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQ 216
Query: 231 VQNLGVG 237
VQ + VG
Sbjct: 217 VQAMSVG 223
>gi|342298444|emb|CBY05412.1| INDEHISCENT-like protein [Aethionema carneum]
Length = 176
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + +L+ VPGG ++++ +LDEA+R+ K LK +V+ L
Sbjct: 106 RRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRML 151
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 44.7 bits (104), Expect = 0.037, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+K+ + + VL +PGGN+++T +LDEA+ ++K L+++VQ L
Sbjct: 26 RRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 70
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 158 DSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTV 214
D T + E + + S+ +++ HN K+R ++ + + L+ +P N+ +
Sbjct: 190 DETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKA 249
Query: 215 GVLDEAVRHLKSLKVEVQNLGVG 237
+LDEA+ ++KSL++++Q + +G
Sbjct: 250 SMLDEAIEYMKSLQLQIQMMSMG 272
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 148 TCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGF 204
+C G D P+ S+ D +K S S++ HN ++R+++ + + L+
Sbjct: 170 SCDSEGGDLPEVPSSTDLPRNSSKRSR-------SAEVHNMSEKRRRRRINEKMKALQNL 222
Query: 205 VPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 223 IPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 256
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + L+ VPGG L+T +L+EA+R++K LK VQ+L
Sbjct: 132 RRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSL 176
>gi|356518416|ref|XP_003527875.1| PREDICTED: transcription factor SAC51-like [Glycine max]
Length = 370
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 42/172 (24%)
Query: 107 NVGREMASSFKEDSDDIDALL-SLEEGDEEEEYDEEEVSTART---------CGIYGSDS 156
N G + S ED+++I+ALL S G ++ D+E ST + C + D+
Sbjct: 196 NPGTSIESEMHEDTEEINALLYSDSYGYSTQDDDDEVTSTGHSPSTMTTHDNCETFRRDT 255
Query: 157 PDSTSTYDSEPQHNKF---------------------SSMLKSSGSSSKCHNGK------ 189
+ ++ + + K SS + S+C +
Sbjct: 256 AEEVASSARKTKKRKLLDGYYDDIQLIDTASSQNLNKSSATGDDDAESRCSSNNNEGSLS 315
Query: 190 -----KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
K++K++ ++++L+ +PGG + + V +LD A+ LKSLK + Q LG+
Sbjct: 316 GNKKIKKEKIRDVLSILQSIIPGGKDKDPVMLLDNAIHCLKSLKHKAQALGL 367
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 132 GDEEEEYDEEEVSTART-CGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN--- 187
G ++E + +++ T + C D PD D + S +++ HN
Sbjct: 339 GKDDESWRQQKRKTLQAECSASQDDDPD-----DESGGMRRSCSRGAKRSRTAEVHNLSE 393
Query: 188 GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G+
Sbjct: 394 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGS 444
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 132 GDEEEEYDEEEVSTART-CGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN--- 187
G ++E + +++ T + C D PD D + S +++ HN
Sbjct: 136 GKDDESWRQQKRKTLQAECSASQDDDPD-----DESGGMRRSCSRGAKRSRTAEVHNLSE 190
Query: 188 GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G+
Sbjct: 191 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGS 241
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R K+ + + L+ +P N+ + +LDEA+ +LK L+++VQ L V N
Sbjct: 103 RRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMN 152
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R K+ + + L+ +P N+ + +LDEA+ +LK L+++VQ L V N
Sbjct: 100 RRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMN 149
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 183 SKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+K HN ++R K+ + + L+ +P N+ + +LDEA+ +LK L+++VQ L V N
Sbjct: 106 AKFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQALAVMN 164
>gi|227016419|gb|ACP18671.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 64 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 106
>gi|227016421|gb|ACP18672.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 64 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 106
>gi|414864593|tpg|DAA43150.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 290
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 177 KSSGSSSKCHNGKKRQKLKKM---VNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQN 233
K+ G+ N RQ+ K++ L +PG N+LNT +L+EA RH+K L+ +V
Sbjct: 150 KAGGACQSVQNSAARQRRKRISEKTAELARLIPGANKLNTAEMLEEASRHVKLLQAQVGM 209
Query: 234 LGV 236
L +
Sbjct: 210 LAL 212
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 133 DEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNK-FSSMLKSSGSSSKCHNG--- 188
D+ + E T+ T + + T+T + NK + + GSS + H+G
Sbjct: 138 DDGRDVVPAEKGTSSTTAMGKKEKVVPTTTMEGMMMANKEMRKVPAAVGSSRRSHHGEGH 197
Query: 189 -----KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R K+ + + L+ VPG ++ N LD+ + ++KSL+ +VQ + VG
Sbjct: 198 NLTEKRRRHKINERLKTLQKLVPGCSKSNQASTLDQTIHYMKSLQQQVQAMSVG 251
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + L+ VPGG L+T +L+EA+R++K LK VQ+L
Sbjct: 133 RRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSL 177
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R+++ + + VL+ VPGG +++T +LDEA +L+ LK +V+ L + +N
Sbjct: 364 QRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQVRELQTLDRRN 416
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 125 ALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSK 184
A+ E+ D E + E++V T + G S +S + K + +SS S+
Sbjct: 70 AVAVAEDDDSGERWTEDQVPTDEGICVMGRRS-------ESSKERRKITRARRSS-RYSQ 121
Query: 185 CHN---GKKRQKLKKMVNVLRGFVPGGNELNT-VGVLDEAVRHLKSLKVEVQNLGVG 237
H+ K+R K+ + + L+ VPG ++ N LD+ +R++KSL+ VQ + VG
Sbjct: 122 THSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQHVQAMSVG 178
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 32/46 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+++ + + VL+ VPGG +++T +LDEA + K L+ +V+ L
Sbjct: 286 QRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYFKFLRAQVKAL 331
>gi|224140751|ref|XP_002323742.1| predicted protein [Populus trichocarpa]
gi|222866744|gb|EEF03875.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
++ K++ + +L +PG + + VLDEA+ +LKSLK++ + LGV +
Sbjct: 260 RKDKIRATLKILESIIPGAKDKEPLLVLDEAIDYLKSLKLKAKTLGVSYL 309
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 149 CGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGS----SSKCHN---GKKRQKLKKMVNVL 201
CG DS + SEP+ + SGS +++ HN ++R K+ + + L
Sbjct: 67 CGGELGGFCDSEAGGSSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKAL 126
Query: 202 RGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 127 QSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 163
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R+++ + + VL+ VPGG +++T +LDEA +L+ L+ +V+ L + +N
Sbjct: 331 QRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQVRELQTLDRRN 383
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 149 CGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGS----SSKCHN---GKKRQKLKKMVNVL 201
CG DS + SEP+ + SGS +++ HN ++R K+ + + L
Sbjct: 67 CGGELGGFCDSEAGGSSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKAL 126
Query: 202 RGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 127 QSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 163
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R K+ + + L+ +P N+ + +LDEA+ ++K L+++VQ L V N
Sbjct: 103 RRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQLQVQTLAVMN 152
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 34/45 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +L+EA+R++K LK +++ L
Sbjct: 122 RRERISEKIRILQRLVPGGRKMDTASMLEEAIRYVKFLKRQIRLL 166
>gi|357131240|ref|XP_003567247.1| PREDICTED: transcription factor LAX PANICLE-like [Brachypodium
distachyon]
Length = 228
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 72 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 114
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + VL+ VPGG+ ++T +LDEA +LK LK +V+ L
Sbjct: 297 RRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 341
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 32/43 (74%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
+R+++ + VL+ VPGG +++T +LDEA+ ++K LK+++Q
Sbjct: 44 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQ 86
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R+++ + + VL+ VPGG +++T +LDEA +L+ LK +++ L + +N
Sbjct: 393 QRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRN 445
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + VL+ VPGG+ ++T +LDEA +LK LK +V+ L
Sbjct: 298 RRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 342
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + VL+ VPGG++++T +LDEA +LK LK +++ L
Sbjct: 287 RRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 331
>gi|227016424|gb|ACP18673.1| barren stalk1-like protein [Leymus triticoides]
Length = 158
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 63 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 105
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 32/43 (74%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
+R+++ + VL+ VPGG +++T +LDEA+ ++K LK+++Q
Sbjct: 14 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQ 56
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R+++ + + VL+ VPGG +++T +LDEA +L+ LK +++ L + +N
Sbjct: 377 QRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRN 429
>gi|224081987|ref|XP_002306548.1| predicted protein [Populus trichocarpa]
gi|222855997|gb|EEE93544.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 35/47 (74%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+++ +++ +++L+ +PGG + + VL+EA+++LKSLK + + LG+
Sbjct: 316 RKENIRETMSILQNLIPGGKGKDAIVVLEEAIQYLKSLKFKAKALGL 362
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R+++ + + VL+ VPGG +++T +LDEA +L+ LK +++ L + +N
Sbjct: 381 QRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRN 433
>gi|147838921|emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
gi|297735648|emb|CBI18142.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 30/43 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ +L+ VPGG +++TV +L+EA+ ++K LK ++
Sbjct: 47 ERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLKTQI 89
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 148 TCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGF 204
+C G D P+ S+ + +K S S++ HN ++R+++ + + L+
Sbjct: 170 SCDSEGGDLPEVPSSTNLPRNSSKRSR-------SAEVHNMSEKRRRRRINEKMKALQNL 222
Query: 205 VPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 223 IPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 256
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R+++ + + VL+ VPGG +++T +LDEA +L+ LK +++ L + +N
Sbjct: 381 QRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRN 433
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 148 TCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGF 204
+C G D P+ S+ + +K S S++ HN ++R+++ + + L+
Sbjct: 170 SCDSEGGDLPEVPSSTNLPRNSSKRSR-------SAEVHNMSEKRRRRRINEKMKALQNL 222
Query: 205 VPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 223 IPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 256
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ +L+ VPGG +++TV +LDEA+ ++K LK ++
Sbjct: 59 ERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 101
>gi|315175249|gb|ADT82843.1| barren stalk1/lax panicle1 [Pharus latifolius]
Length = 141
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 43
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 185 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 234
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 185 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 234
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 32/44 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
K+R+K+ K + L+ +P N+++ +LD+A+ +LK+LK+++Q
Sbjct: 347 KRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQLQ 390
>gi|168024946|ref|XP_001764996.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683805|gb|EDQ70212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 637
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 156 SPDSTSTYDSEPQHNKFSSMLKSSGSSSK--CHNGKKRQKLKKMVNVLRGFVPGGNELNT 213
SPD + +SEP+ + +SK K+R+KL+K + LR VP +++
Sbjct: 386 SPDLDTEMNSEPEKKRGRRKFPEGWVASKNLISERKRREKLQKSLLDLRALVPKITKMDK 445
Query: 214 VGVLDEAVRHLKSLKVEVQNL 234
V +L +A+ H++ LK +V+ L
Sbjct: 446 VSILSDAIEHVQDLKQKVEML 466
>gi|162459126|ref|NP_001105271.1| barren stalk1 [Zea mays]
gi|56384213|gb|AAV85767.1| barren stalk1 [Zea mays]
gi|56384215|gb|AAV85768.1| barren stalk1 [Zea mays]
gi|223946525|gb|ACN27346.1| unknown [Zea mays]
gi|414879869|tpg|DAA57000.1| TPA: barren stalk1 [Zea mays]
Length = 219
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK ++
Sbjct: 63 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQI 105
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+ ++K LK +++ L
Sbjct: 143 RRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKRQIRLL 187
>gi|115440839|ref|NP_001044699.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|68565366|sp|Q7XAQ6.1|LAX_ORYSJ RecName: Full=Transcription factor LAX PANICLE
gi|33342172|dbj|BAC80247.1| transcription factor [Oryza sativa Japonica Group]
gi|56785174|dbj|BAD81850.1| transcription factor [Oryza sativa Japonica Group]
gi|113534230|dbj|BAF06613.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|342674132|gb|AEL31274.1| LAX protein [Oryza sativa Japonica Group]
Length = 215
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 51 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 93
>gi|227016415|gb|ACP18669.1| barren stalk1-like protein [Leymus cinereus]
Length = 149
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 64 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 106
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + VL+ VPGG++++T +LDEA +LK LK +++ L
Sbjct: 315 RRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 359
>gi|242059137|ref|XP_002458714.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
gi|241930689|gb|EES03834.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
Length = 232
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK ++
Sbjct: 68 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI 110
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + VL+ VPGG++++T +LDEA +LK LK +++ L
Sbjct: 313 RRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 357
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 174 SMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVE 230
SM +++ HN ++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++
Sbjct: 360 SMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQ 419
Query: 231 VQNLGVG 237
VQ + +G
Sbjct: 420 VQMMSMG 426
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+K+ + + VL+ VPGG++++ +LDEA +LK L+ +++ L
Sbjct: 199 KRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKAL 244
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Query: 179 SGSSSK------CHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
SGSS+K HN ++R ++ + + L+ +P N+ + +LDEA+ +LKSL++
Sbjct: 250 SGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQL 309
Query: 230 EVQNLGVG 237
+VQ + +G
Sbjct: 310 QVQMMSMG 317
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
K+R ++ K + L+ +P N+++ +L EA+ +LKSL+++VQ + +G
Sbjct: 386 KRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMSMGT 435
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
+++ HN ++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ + +G
Sbjct: 361 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 419
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+K+ + + VL+ VPGG++++ +LDEA +LK L+ +++ L
Sbjct: 199 KRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKAL 244
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 163 YDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDE 219
++SE + S +++ HN ++R ++ + + L+ +P N+ + +LDE
Sbjct: 290 FESEAKKQVCGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDE 349
Query: 220 AVRHLKSLKVEVQNLGVG 237
A+ +LKSL+++VQ + +G
Sbjct: 350 AISYLKSLQLQVQMMSMG 367
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
K+R ++ K + L+ +P N+++ +L EA+ +LKSL+++VQ + +G
Sbjct: 392 KRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMSMGT 441
>gi|125528258|gb|EAY76372.1| hypothetical protein OsI_04303 [Oryza sativa Indica Group]
Length = 223
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG+++ TV +L++A+ ++K LK +V
Sbjct: 59 ERRHRISDRFRVLRSLVPGGSKMETVSMLEQAIHYVKFLKAQV 101
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 35/50 (70%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G+
Sbjct: 363 RRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMAMGS 412
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
K+R K+ K + +L+ +P N+ + +LD+A+ +LK+LK+++Q
Sbjct: 762 KRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQIQ 805
>gi|62466473|gb|AAX83562.1| LAX [Oryza barthii]
gi|62466475|gb|AAX83563.1| LAX [Oryza meridionalis]
gi|62466477|gb|AAX83564.1| LAX [Oryza longistaminata]
gi|62466479|gb|AAX83565.1| LAX [Oryza glumipatula]
gi|62466481|gb|AAX83566.1| LAX [Oryza nivara]
gi|62466483|gb|AAX83567.1| LAX [Oryza rufipogon]
gi|62466485|gb|AAX83568.1| LAX [Oryza sativa Japonica Group]
gi|62466487|gb|AAX83569.1| LAX [Oryza sativa Japonica Group]
gi|62466489|gb|AAX83570.1| LAX [Oryza sativa Japonica Group]
gi|62466493|gb|AAX83572.1| LAX [Oryza sativa Japonica Group]
gi|62466495|gb|AAX83573.1| LAX [Oryza sativa Indica Group]
gi|62466497|gb|AAX83574.1| LAX [Oryza sativa Indica Group]
gi|62466501|gb|AAX83576.1| LAX [Oryza sativa Indica Group]
gi|62466511|gb|AAX83581.1| LAX [Oryza sativa Indica Group]
gi|62466517|gb|AAX83584.1| LAX [Oryza rufipogon]
Length = 189
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 35 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
S++ HN ++R K+ + + L+ +P N+ + V +LDEA+ +LKSL++++Q L +G
Sbjct: 19 SAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQMLVMG 77
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + VL+ VPGG++++T +LDEA +LK LK +++ L
Sbjct: 243 RRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 287
>gi|62466521|gb|AAX83586.1| LAX [Oryza rufipogon]
Length = 190
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 35 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
S++ HN ++R K+ + + L+ +P N+ + V +LDEA+ +LKSL++++Q L +G
Sbjct: 19 SAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQMLVMG 77
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
+++ HN ++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ + +G
Sbjct: 271 AAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 329
>gi|62466519|gb|AAX83585.1| LAX [Oryza rufipogon]
Length = 189
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 35 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 185 CHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
C ++R K+ + + L+ VPG ++ N LD+ + ++KSL+ +VQ + VG
Sbjct: 220 CRAQRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSVG 272
>gi|315175251|gb|ADT82844.1| barren stalk1/lax panicle1 [Miscanthus sinensis]
Length = 162
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
+R ++ VLR VPGG++++TV +L++A+ ++K LK ++
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI 43
>gi|62466491|gb|AAX83571.1| LAX [Oryza sativa Japonica Group]
gi|62466499|gb|AAX83575.1| LAX [Oryza sativa Indica Group]
gi|62466503|gb|AAX83577.1| LAX [Oryza sativa Indica Group]
gi|62466505|gb|AAX83578.1| LAX [Oryza sativa Indica Group]
gi|62466507|gb|AAX83579.1| LAX [Oryza sativa Indica Group]
gi|62466509|gb|AAX83580.1| LAX [Oryza sativa Indica Group]
gi|62466513|gb|AAX83582.1| LAX [Oryza rufipogon]
gi|62466515|gb|AAX83583.1| LAX [Oryza rufipogon]
Length = 189
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 35 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 34/187 (18%)
Query: 63 IIFDQTDHRSQIMFH-PAIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDSD 121
++ DQ + H P AH M P + +D+F R SS K+
Sbjct: 99 LVGDQVAVNQTLSIHEPTAAHAEM-PKRKIESHASEDDFRRQ----------SSKKKLQA 147
Query: 122 DIDALLSLEE------------GDEEEEYDEEEVSTARTCGIYGS--DSPDSTSTYDSEP 167
+AL S+++ GDEEE S+ R+C Y S DS + +++
Sbjct: 148 PTNALKSVKKARPGRNQKSIVCGDEEEN---NARSSGRSCCSYSSEEDSQAFQADLNAKT 204
Query: 168 QHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSL 227
+ N++ + S + ++R+++ + L+ VP G +++ +L+EAVR++K L
Sbjct: 205 RSNRWPATDPQS-----LYAKQRRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFL 259
Query: 228 KVEVQNL 234
+++++ L
Sbjct: 260 QLQIKLL 266
>gi|62466523|gb|AAX83587.1| LAX [Oryza rufipogon]
Length = 189
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK +V
Sbjct: 35 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 35/50 (70%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G+
Sbjct: 173 RRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMAMGS 222
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 169 HNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLK 225
H + ++ +++ HN ++R ++ + + L+ +P N+++ +L+EA+ +LK
Sbjct: 107 HRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLK 166
Query: 226 SLKVEVQNLGVG 237
+L+++VQ + +G
Sbjct: 167 TLQLQVQMMSMG 178
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
K+R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 446 KRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 494
>gi|302812000|ref|XP_002987688.1| hypothetical protein SELMODRAFT_447051 [Selaginella moellendorffii]
gi|300144580|gb|EFJ11263.1| hypothetical protein SELMODRAFT_447051 [Selaginella moellendorffii]
Length = 268
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++++++++ V L+ VPGG+ ++ VLDEA+ ++K L++ V+ L
Sbjct: 209 QRKERIRQTVKALQSIVPGGDSMDPAIVLDEAILYMKVLQMRVRQL 254
>gi|357158743|ref|XP_003578226.1| PREDICTED: uncharacterized protein LOC100844721 [Brachypodium
distachyon]
Length = 247
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
VL+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 186 VLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSL 220
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ + +G
Sbjct: 319 RRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 367
>gi|326527333|dbj|BAK04608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++ V +L++A+ ++K LK +V
Sbjct: 64 ERRHRISDRFRVLRSLVPGGSKMDNVSMLEQAIHYVKFLKAQV 106
>gi|302802899|ref|XP_002983203.1| hypothetical protein SELMODRAFT_445453 [Selaginella moellendorffii]
gi|300148888|gb|EFJ15545.1| hypothetical protein SELMODRAFT_445453 [Selaginella moellendorffii]
Length = 277
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++++++++ V L+ VPGG+ ++ VLDEA+ ++K L++ V+ L
Sbjct: 218 QRKERIRQTVKALQSIVPGGDSMDPAIVLDEAILYMKVLQMRVRQL 263
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ + +L+ VPGG +++TV +L+EA+R++K LK ++
Sbjct: 54 ERRHRISERFKILQSMVPGGAKMDTVSMLEEAIRYVKFLKAQI 96
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+++ HN ++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 163 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 222
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 33/45 (73%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+R+++ + + +L+ VPGG +++T +LDEA+ ++K LK +++ L
Sbjct: 127 RRERISEKIRILQRLVPGGTKMDTASMLDEAILYVKFLKRQIRLL 171
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 31/151 (20%)
Query: 93 ATYIQDNFERHDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIY 152
A + +DN E T + S K S D D+ +E ++EEE D + V+
Sbjct: 201 AAFCRDN-ETTLMTWASFDSPRSLKTKSIDEDSACHVESENQEEEQDTKRVA-------- 251
Query: 153 GSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNG---KKRQKLKKMVNVLRGFVPGGN 209
N+ S +S ++ HN ++R ++ + + L+ VP +
Sbjct: 252 -----------------NRSHSARRSRAAA--IHNQSERRRRDRINEKMKALQKLVPNAS 292
Query: 210 ELNTVGVLDEAVRHLKSLKVEVQNLGVGNMK 240
+ + +LDE + +LK L+ +VQ + V +M+
Sbjct: 293 KTDKASMLDEVIEYLKQLQAQVQFMSVRSMQ 323
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 173 SSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
SS G + K ++R K+ + + L+ VPG ++ N LD+ + ++KSL+ +VQ
Sbjct: 165 SSWRSHHGEAHKLTEKRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQQQVQ 224
Query: 233 NLGVG 237
+ VG
Sbjct: 225 AMSVG 229
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ +L+ VPGG +++TV +L+EA+ ++K LK +V
Sbjct: 48 ERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQV 90
>gi|315175247|gb|ADT82842.1| barren stalk1/lax panicle1 [Streptochaeta angustifolia]
Length = 125
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK ++
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI 43
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ + +G
Sbjct: 287 RRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 335
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
G +++ HN ++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +
Sbjct: 320 GRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
Query: 237 G 237
G
Sbjct: 380 G 380
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+++ HN ++R K+ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 143
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%), Gaps = 9/73 (12%)
Query: 174 SMLKSSGSSSK------CHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHL 224
++L+S+ S K HN ++R ++ + + L+ +P N+++ +LDEA+ +L
Sbjct: 392 ALLRSTNRSMKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYL 451
Query: 225 KSLKVEVQNLGVG 237
K+L+++VQ + +G
Sbjct: 452 KTLQLQVQMMSMG 464
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
G +++ HN ++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +
Sbjct: 320 GRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
Query: 237 G 237
G
Sbjct: 380 G 380
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
G +++ HN ++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +
Sbjct: 320 GRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
Query: 237 G 237
G
Sbjct: 380 G 380
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
G +++ HN ++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +
Sbjct: 320 GRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
Query: 237 G 237
G
Sbjct: 380 G 380
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
G +++ HN ++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +
Sbjct: 320 GRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 379
Query: 237 G 237
G
Sbjct: 380 G 380
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ + +G
Sbjct: 274 RRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 322
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 176 LKSSGSSSKC---HN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
L+SS S+ HN ++R ++ + + L+ +P N+ + +LDEA+ +LK L++
Sbjct: 131 LRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQL 190
Query: 230 EVQNLGVGN 238
+VQ L + N
Sbjct: 191 QVQMLSMRN 199
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 164 DSEPQHNKFSSMLKSSGS----SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGV 216
SEP+ + SGS +++ HN ++R K+ + + L+ +P N+ + +
Sbjct: 5 SSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASM 64
Query: 217 LDEAVRHLKSLKVEVQNLGVGN 238
LDEA+ +LK L+++VQ L + N
Sbjct: 65 LDEAIEYLKQLQLQVQMLSMRN 86
>gi|242080239|ref|XP_002444888.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
gi|241941238|gb|EES14383.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
Length = 331
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 205 LQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 238
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 169 HNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLK 225
H + ++ +++ HN ++R ++ + + L+ +P N+++ +L+EA+ +LK
Sbjct: 323 HRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLK 382
Query: 226 SLKVEVQNLGVGN 238
+L+++VQ + +G
Sbjct: 383 TLQLQVQMMSMGT 395
>gi|326530726|dbj|BAK01161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 238
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
VL+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 177 VLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSL 211
>gi|242080237|ref|XP_002444887.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
gi|241941237|gb|EES14382.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
Length = 348
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 222 LQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 255
>gi|255538274|ref|XP_002510202.1| transcription factor, putative [Ricinus communis]
gi|223550903|gb|EEF52389.1| transcription factor, putative [Ricinus communis]
Length = 274
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 186 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 219
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 466 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMG 514
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 155 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 204
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 198 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 247
>gi|357454723|ref|XP_003597642.1| Transcription factor bHLH87 [Medicago truncatula]
gi|355486690|gb|AES67893.1| Transcription factor bHLH87 [Medicago truncatula]
Length = 392
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL-GVGN 238
VL+ VPGG +++T +LDEA +LK L+ +V+ L +GN
Sbjct: 318 VLQKIVPGGTKMDTASMLDEAANYLKFLRAQVKELENIGN 357
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+++ HN ++R K+ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 106 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 165
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 169 HNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLK 225
H + ++ +++ HN ++R ++ + + L+ +P N+++ +L+EA+ +LK
Sbjct: 323 HRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLK 382
Query: 226 SLKVEVQNLGVGN 238
+L+++VQ + +G
Sbjct: 383 TLQLQVQMMSMGT 395
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 169 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 218
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ K + L+ +P +++ + +LDEA+ +LK+L+++VQ + +G
Sbjct: 394 RRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMSMG 442
>gi|293333080|ref|NP_001168866.1| uncharacterized protein LOC100382671 [Zea mays]
gi|223973413|gb|ACN30894.1| unknown [Zea mays]
Length = 335
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 207 LQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 240
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 35/50 (70%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G+
Sbjct: 11 RRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGS 60
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N N
Sbjct: 187 RRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGIN 239
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 458 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 506
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L
Sbjct: 136 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQYL 181
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 382 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 430
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Query: 179 SGSSSK------CHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
SGSS+K HN ++R ++ + + L+ +P N+ + +LDEA+ +LKSL++
Sbjct: 250 SGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQL 309
Query: 230 EVQNLGVGNM 239
+VQ + + M
Sbjct: 310 QVQRVQLMQM 319
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 473 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 521
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N N
Sbjct: 208 RRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGIN 260
>gi|224063507|ref|XP_002301178.1| predicted protein [Populus trichocarpa]
gi|222842904|gb|EEE80451.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 179 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 212
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ---N 233
G +++ HN ++R ++ + + L+ +P N+++ +L+EA+ +LK+L+++VQ
Sbjct: 323 GRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMST 382
Query: 234 LGVGNM 239
+G M
Sbjct: 383 MGTAGM 388
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ---N 233
G +++ HN ++R ++ + + L+ +P N+++ +L+EA+ +LK+L+++VQ
Sbjct: 323 GRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMST 382
Query: 234 LGVGNM 239
+G M
Sbjct: 383 MGTAGM 388
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 468 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 516
>gi|357489915|ref|XP_003615245.1| Transcription factor bHLH143 [Medicago truncatula]
gi|355516580|gb|AES98203.1| Transcription factor bHLH143 [Medicago truncatula]
Length = 431
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 35/54 (64%)
Query: 186 HNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
H +++K++ ++++L+ VP G + + +LDEA+ L SLK++ + LG+ +
Sbjct: 378 HKKMRKEKIQNVLSILQCIVPNGKDKEPIQLLDEAIHCLNSLKLKARALGLNAL 431
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ---N 233
G +++ HN ++R ++ + + L+ +P N+++ +L+EA+ +LK+L+++VQ
Sbjct: 327 GRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMST 386
Query: 234 LGVGNM 239
+G M
Sbjct: 387 MGTAGM 392
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 172 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRN 221
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 33/49 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
K+R ++ + + L+ +P N+ + +LDEA+ ++KSL++++Q + +G
Sbjct: 304 KRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVMSMG 352
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 473 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 521
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 33/49 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+ + +LDEA+ +LK+L+++VQ + +G
Sbjct: 312 RRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMG 360
>gi|224084350|ref|XP_002307268.1| predicted protein [Populus trichocarpa]
gi|222856717|gb|EEE94264.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 27/34 (79%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK++VQ+L
Sbjct: 185 LQRLVPGGTKMDTASMLDEAIHYVKFLKMQVQSL 218
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 166 EPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLK 225
EP H ++ + + ++R ++ + + L+ +P N+ + +LDEA+ +LK
Sbjct: 302 EPAHKTATAKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLK 361
Query: 226 SLKVEVQ 232
SL++++Q
Sbjct: 362 SLQLQLQ 368
>gi|297725985|ref|NP_001175356.1| Os08g0108500 [Oryza sativa Japonica Group]
gi|255678100|dbj|BAH94084.1| Os08g0108500 [Oryza sativa Japonica Group]
Length = 306
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 186 LQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 219
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 479 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMG 527
>gi|356509739|ref|XP_003523603.1| PREDICTED: transcription factor HEC1-like [Glycine max]
gi|83853819|gb|ABC47852.1| bHelix-loop-helix transcription factor [Glycine max]
Length = 264
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 173 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 206
>gi|356518097|ref|XP_003527719.1| PREDICTED: uncharacterized protein LOC100788158 [Glycine max]
gi|83853832|gb|ABC47864.1| bhelix-loop-helix transcription factor [Glycine max]
Length = 258
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 176 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 209
>gi|125601936|gb|EAZ41261.1| hypothetical protein OsJ_25770 [Oryza sativa Japonica Group]
Length = 303
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 183 LQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 216
>gi|125559887|gb|EAZ05335.1| hypothetical protein OsI_27539 [Oryza sativa Indica Group]
Length = 303
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+R++K LK +VQ L
Sbjct: 183 LQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 216
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 33/49 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+ + +LDEA+ +LK+L+++VQ + +G
Sbjct: 316 RRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMG 364
>gi|297805516|ref|XP_002870642.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
gi|297316478|gb|EFH46901.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
Length = 637
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL + +LR +P N+++ V +LD+ + +L+ L+ VQ L
Sbjct: 448 KRREKLNERFMILRSIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 122 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRN 171
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+++ HN ++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 257
Query: 239 MKN 241
N
Sbjct: 258 GIN 260
>gi|414869866|tpg|DAA48423.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
VL+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 187 VLQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 221
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 37/231 (16%)
Query: 16 LLSQVSGDYVHIPVASPFGADLPP--AANPPTPFQGVEFHPSEVCPKNFIIFDQTDHRSQ 73
LLS +SG A D PP +A P+P +GV NF IF S+
Sbjct: 84 LLSDISG-------AEATAVDAPPNESARHPSPSKGV---------INFSIF------SR 121
Query: 74 IMFHPAIAHKFMGPSFNFHATYIQDNFERHDATNVGREMASSFKEDSDDIDALLSLEEGD 133
+ + K PS + QD+ A G E +S ++ + A SL +
Sbjct: 122 ALMESSAVEKPHAPSTSACPLSEQDSL----AVKKGLETQASSEKIPESPIASSSLCSNN 177
Query: 134 EEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKK 190
+ + EE G+ + + K M K SS+ HN ++
Sbjct: 178 DPKRRRREEDD-----GVDYQTEENGEGESTNRRHAGKGRLMNKKRSRSSEVHNLSERRR 232
Query: 191 RQKLKKMVNVLRGFVPGGN-ELNTVGVLDEAVRHLKSLKVEVQNLGVGNMK 240
R ++ + + L+ VP N +++ +L+E + +LKSL+++VQ + +G M+
Sbjct: 233 RDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQAMSMGYMR 283
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 165 SEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAV 221
++P+ S +++ HN ++R ++ + + L+ +P N+ + +LDEA+
Sbjct: 300 ADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAI 359
Query: 222 RHLKSLKVEVQNLGVG 237
+LK+L+++VQ + +G
Sbjct: 360 EYLKTLQLQVQMMSMG 375
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 151 RRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 200
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 476 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 524
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ + +G
Sbjct: 337 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 385
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%)
Query: 177 KSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
K S K + K+R + K + L+ +P + + +LDEA++++++L+++VQ + +
Sbjct: 228 KRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
Query: 237 GN 238
GN
Sbjct: 288 GN 289
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 169 HNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLK 225
H + ++ +++ HN ++R ++ + + L+ +P N+++ +L+EA+ +LK
Sbjct: 202 HRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLK 261
Query: 226 SLKVEVQNLGVGN 238
+L+++VQ + +G
Sbjct: 262 TLQLQVQMMSMGT 274
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
++R ++ + + L+ VP ++ + +LDE + +LK L+ +VQ + V NM
Sbjct: 258 RRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAMSVRNM 308
>gi|168042091|ref|XP_001773523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675225|gb|EDQ61723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 706
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLK 225
+R+++ V VL+ FVPGG +++T +LDEA+ ++K
Sbjct: 522 RRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVK 557
>gi|449447251|ref|XP_004141382.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524104|ref|XP_004169063.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 238
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 164 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 197
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 161 STYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVL 217
S+ D P NK + +++ HN ++R ++ + + L+ VP N+ + +L
Sbjct: 234 SSRDRRPASNKRRT------RAAEVHNMSERRRRDRINEKMRALQELVPHCNKTDKASIL 287
Query: 218 DEAVRHLKSLKVEVQ 232
DEA+ +LKSL+++VQ
Sbjct: 288 DEAIEYLKSLQMQVQ 302
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 136 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 185
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%)
Query: 177 KSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
K S K + K+R + K + L+ +P + + +LDEA++++++L+++VQ + +
Sbjct: 228 KRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
Query: 237 GN 238
GN
Sbjct: 288 GN 289
>gi|162462600|ref|NP_001105339.1| anthocyanin regulatory Lc protein [Zea mays]
gi|114156|sp|P13526.1|ARLC_MAIZE RecName: Full=Anthocyanin regulatory Lc protein
gi|168601|gb|AAA33504.1| regulatory protein [Zea mays]
gi|89473790|gb|ABD72707.1| anthocyanin regulatory LC protein [Zea mays]
Length = 610
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 179 SGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
SG+ +K H K+R+KL +M VL+ +P + +N +L E + +LK L+ VQ L
Sbjct: 410 SGTGTKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQEL 468
>gi|413919289|gb|AFW59221.1| plant color component at R1 [Zea mays]
Length = 610
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 179 SGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
SG+ +K H K+R+KL +M VL+ +P + +N +L E + +LK L+ VQ L
Sbjct: 410 SGTGTKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQEL 468
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+++ HN ++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 147 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 206
>gi|22479|emb|CAA43115.1| SN [Zea mays]
Length = 616
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 179 SGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
SG+ +K H K+R+KL +M VL+ +P + +N +L E + +LK L+ VQ L
Sbjct: 416 SGTGTKKHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQEL 474
>gi|224137546|ref|XP_002327153.1| predicted protein [Populus trichocarpa]
gi|222835468|gb|EEE73903.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 181 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 214
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 33/48 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
K+R K+ K + L+ +P ++++ +LD+A+ +LK+L++++Q + +
Sbjct: 391 KRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQLQLQMMSM 438
>gi|315175245|gb|ADT82841.1| barren stalk1/lax panicle1 [Joinvillea ascendens]
Length = 140
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 31/43 (72%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
+R ++ VLR VPGG++++TV +L++A+ +++ LK +++
Sbjct: 1 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIDYVQFLKAQIR 43
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
+R ++ +L+ VPGG +++TV +LDEA+ ++K LK ++
Sbjct: 55 RRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQI 96
>gi|242081721|ref|XP_002445629.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
gi|241941979|gb|EES15124.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
Length = 269
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 201 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 234
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ +L+ +PGG++L+TV +L+EA+ ++K LK ++
Sbjct: 43 ERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQI 85
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
S++ HN ++R ++ + + L+ +P N+++ +LDEA+ +LKSL+++VQ + + +
Sbjct: 342 SAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMAS 401
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 160 TSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGV 216
T EP SS+ ++ HN K+R ++ + + L+ VP ++ + +
Sbjct: 239 TVVIKEEPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASM 298
Query: 217 LDEAVRHLKSLKVEVQ 232
LDE + HLK L+ +VQ
Sbjct: 299 LDEVIEHLKQLQAQVQ 314
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 132 GDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---G 188
G +EEE+ + + + G+ +S ++ + +SE Q + + +++ HN
Sbjct: 6 GSQEEEHLDLIMRHHASMGLDRCESEEALGSSESE-QPTRPARPRGKRSRAAEVHNLSEK 64
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P ++ + +LD+A+ +LK L+++VQ L + N
Sbjct: 65 RRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRN 114
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 140 EEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKK 196
EEE ST Y S++PD S H + + S++ H K+R + K
Sbjct: 191 EEEEST------YLSNNPDDESDDAKTQVHARIRKPVTKRKRSTEVHKLYERKRRDEFNK 244
Query: 197 MVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+ L+ +P + + +LDEAV+++++L+ +VQ + +GN
Sbjct: 245 KMRALQDILPNCYKDDKASLLDEAVKYMRTLQHQVQMMSMGN 286
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 160 TSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGV 216
T EP SS+ ++ HN K+R ++ + + L+ VP ++ + +
Sbjct: 239 TVVIKEEPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASM 298
Query: 217 LDEAVRHLKSLKVEVQ 232
LDE + HLK L+ +VQ
Sbjct: 299 LDEVIEHLKQLQAQVQ 314
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 70/136 (51%), Gaps = 34/136 (25%)
Query: 114 SSFKEDSDDIDALLSLEEGD---EEEEYDEEEVSTARTCGIYG-SDSPDSTSTYDSEPQH 169
S+FK ++D+ D L+E + E+++++ + A T I +DSPD
Sbjct: 184 SAFKSNADE-DESHDLQEQNLSSEDDDFNASQKLNAGTSSILNQNDSPD----------- 231
Query: 170 NKFSSMLKSSGSSSKCHNG-----------KKRQKLKKMVNVLRGFVPGGNELNTVGVLD 218
LK G S +C+ G K+R+++ + + +L+ VP G +++ +L+
Sbjct: 232 ------LKLKGKS-RCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLE 284
Query: 219 EAVRHLKSLKVEVQNL 234
EAV+++K L+V+++ L
Sbjct: 285 EAVQYVKFLQVQIKLL 300
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
S++ HN ++R ++ + + L+ +P N+++ +LDEA+ +LKSL+++VQ
Sbjct: 344 SAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 132 GDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---G 188
G +EEE+ + + + G+ +S ++ + +SE Q + + +++ HN
Sbjct: 6 GSQEEEHLDLIMRHHASMGLDRCESEEALGSSESE-QPTRPARPRGKRSRAAEVHNLSEK 64
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P ++ + +LD+A+ +LK L+++VQ L + N
Sbjct: 65 RRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRN 114
>gi|242044912|ref|XP_002460327.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
gi|241923704|gb|EER96848.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
Length = 261
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 194 TLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSL 228
>gi|226507104|ref|NP_001143014.1| uncharacterized protein LOC100275478 [Zea mays]
gi|194702772|gb|ACF85470.1| unknown [Zea mays]
gi|195612944|gb|ACG28302.1| hypothetical protein [Zea mays]
gi|224029439|gb|ACN33795.1| unknown [Zea mays]
gi|414867113|tpg|DAA45670.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414867114|tpg|DAA45671.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 280
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 198 VNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
V LR VPGG + VLDEA+ +L+ LK++V+ LG ++
Sbjct: 239 VAALRNMVPGGIAKDAAAVLDEAICYLQYLKLKVKTLGAVSL 280
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 155 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 204
>gi|413921862|gb|AFW61794.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 182 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 215
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 30/43 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ +L+ VPGG +++TV +L+EA+ ++K LK ++
Sbjct: 48 ERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKNQI 90
>gi|315175241|gb|ADT82839.1| barren stalk1/lax panicle1 [Chasmanthium latifolium]
Length = 151
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 31/43 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
++R ++ VLR VPGG++++TV +L++A+ ++K LK ++
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKGQI 43
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ K + L+ +P +++ + +LDEA+ +LK+L+++VQ + +G
Sbjct: 25 RRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMSMG 73
>gi|226497552|ref|NP_001147658.1| LOC100281267 [Zea mays]
gi|195612888|gb|ACG28274.1| DNA binding protein [Zea mays]
gi|414885734|tpg|DAA61748.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 177 TLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSL 211
>gi|359482873|ref|XP_003632856.1| PREDICTED: transcription factor bHLH87-like [Vitis vinifera]
Length = 471
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
VL+ VPGGN+++T +LDEA +LK L+ +V+ L
Sbjct: 390 VLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKAL 424
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 134 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 183
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 180 GSSSKCHNG--------KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
GSS + H+G ++R K+ + + L+ VPG ++ N LD+ + ++KSL+ +V
Sbjct: 170 GSSRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKSNQASTLDQTIHYMKSLQHQV 229
Query: 232 QNL 234
Q +
Sbjct: 230 QAM 232
>gi|18542170|gb|AAL75479.1|AF466202_5 r1-B73 [Zea mays]
gi|413919290|gb|AFW59222.1| plant color component at R1 [Zea mays]
Length = 585
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 179 SGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
SG+ +K H K+R+KL +M VL+ +P + +N +L E + +LK L+ VQ L
Sbjct: 385 SGTGTKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQEL 443
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ + +G+
Sbjct: 339 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGS 388
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 36/51 (70%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L +M
Sbjct: 204 KRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDM 254
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 177 KSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQN 233
K +++ HN ++R ++ + + L+ VP N+ + +LDEA+ +LKSL+++VQ
Sbjct: 225 KRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQI 284
Query: 234 LGV 236
+ +
Sbjct: 285 MWM 287
>gi|147797615|emb|CAN65002.1| hypothetical protein VITISV_023488 [Vitis vinifera]
Length = 447
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
VL+ VPGGN+++T +LDEA +LK L+ +V+ L
Sbjct: 366 VLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKAL 400
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVE 230
+R+K+ + + L+ VPGG++++T +LDEA +LK LK +
Sbjct: 312 RREKVSERLRALQRLVPGGSKMDTASMLDEAASYLKFLKSQ 352
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 164 DSEPQHNKFSSMLKSSGSS----------SKCHNGKKRQKLKKMVNVLRGFVPGGNELNT 213
D+ Q N + L S+G + + K+R+++ + + VL+ VP G +++
Sbjct: 256 DNASQENSGGTTLNSNGKTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVDI 315
Query: 214 VGVLDEAVRHLKSLKVEVQNLGVGNM 239
+L+EAV ++K L+ +++ +G++
Sbjct: 316 STMLEEAVNYVKFLQTQIKVCTIGDI 341
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 177 KSSGSSSK-----CHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLK 228
K SGS+ + HN ++R ++ + + L+ +P N+ + +LDEA+ +LKSL+
Sbjct: 25 KRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQ 84
Query: 229 VEVQNLGVGN 238
+++Q + +G+
Sbjct: 85 LQLQVMWMGS 94
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 31/44 (70%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ +P N+++ +LDEA+ +LKSL+++VQ
Sbjct: 354 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>gi|449525822|ref|XP_004169915.1| PREDICTED: transcription factor bHLH143-like [Cucumis sativus]
Length = 360
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 62/239 (25%)
Query: 55 SEVCPKNFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERH----DATN--- 107
+E + FIIFDQT +++ +M+ A + S + + D+ E D N
Sbjct: 108 TEFPKREFIIFDQTGNQTSVMYSSDTAQIPISISTKNCSHGLNDDEEDAAGDIDLKNYLF 167
Query: 108 ---------VGREMASSFKEDSDDIDALLSLEE-----GDEE------------EEYDE- 140
G E S ED+D+I+ALL ++ D+E E YD+
Sbjct: 168 HKDPLKSGIAGEE--SEMHEDTDEINALLYSDDDNHYISDDEVTSTGHSPPLIKELYDKQ 225
Query: 141 -----EEVSTA-----RTCGIYG-----SDSPDSTSTYDSEPQHNKFSSMLKSS--GSSS 183
EEV+++ R + G S++P S N + +KSS G +S
Sbjct: 226 IEEMNEEVASSDGPRKRQRMVDGGHKKLSEAPVSVKV----DALNNYRVDMKSSYTGGNS 281
Query: 184 KCHN-----GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
+ H K+ KL++ + +L VPG + + V+DEA+ +LKSLK + + +G+
Sbjct: 282 QGHLMDSNFSSKKDKLRETLKLLETMVPGAEGKHPMLVIDEAIDYLKSLKFKAKAMGLA 340
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 154 SDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNG--------KKRQKLKKMVNVLRGFV 205
S SPD D EP + S+ + S+ +C ++R ++ + + L+ +
Sbjct: 296 SVSPDED--LDDEPGATRRSA----ARSAKRCRTAEVHNLSERRRRDRINEKMRALQELI 349
Query: 206 PGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
P N+++ +L+EA+ +LK+L+++VQ + +G
Sbjct: 350 PNCNKVDKSSMLEEAIEYLKTLQLQVQMMSMGT 382
>gi|357141643|ref|XP_003572297.1| PREDICTED: transcription factor AIG1-like [Brachypodium distachyon]
Length = 238
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 164 DSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEA 220
D E + +S + +G + + H+ K+RQ++ + LR FVP + ++ +L E
Sbjct: 4 DGECSARRPASSSRKAGPAVRSHSEAERKRRQRINGHLATLRTFVPSASRMDKAALLGEV 63
Query: 221 VRHLKSLKVEVQNLGVG 237
VRH++ L+ + + G
Sbjct: 64 VRHVRELRGKASDATAG 80
>gi|449438234|ref|XP_004136894.1| PREDICTED: transcription factor bHLH143-like [Cucumis sativus]
Length = 360
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 62/239 (25%)
Query: 55 SEVCPKNFIIFDQTDHRSQIMFHPAIAHKFMGPSFNFHATYIQDNFERH----DATN--- 107
+E + FIIFDQT +++ +M+ A + S + + D+ E D N
Sbjct: 108 TEFPKREFIIFDQTGNQTSVMYSSDTAQIPISISTKNCSHGLNDDEEDAAGDIDLKNYLF 167
Query: 108 ---------VGREMASSFKEDSDDIDALLSLEE-----GDEE------------EEYDE- 140
G E S ED+D+I+ALL ++ D+E E YD+
Sbjct: 168 HKDPLKSGIAGEE--SEMHEDTDEINALLYSDDDNHYISDDEVTSTGHSPPLIKELYDKQ 225
Query: 141 -----EEVSTA-----RTCGIYG-----SDSPDSTSTYDSEPQHNKFSSMLKSS--GSSS 183
EEV+++ R + G S++P S N + +KSS G +S
Sbjct: 226 IEEMNEEVASSDGPRKRQRMVDGGHKKLSEAPVSVKV----DALNNYRVDMKSSYTGGNS 281
Query: 184 KCHN-----GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
+ H K+ KL++ + +L VPG + + V+DEA+ +LKSLK + + +G+
Sbjct: 282 QGHLMDSNFSSKKDKLRETLKLLETMVPGAEGKHPMLVIDEAIDYLKSLKFKAKAMGLA 340
>gi|62734583|gb|AAX96692.1| Helix-loop-helix DNA-binding domain, putative [Oryza sativa
Japonica Group]
gi|77549727|gb|ABA92524.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 458
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 173 SSMLKSSGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
++M GSS K H ++R+KLK+M +L+ VP ++++ +L E + +LK L+
Sbjct: 232 ATMTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEK 291
Query: 230 EVQNL 234
V+ L
Sbjct: 292 RVEEL 296
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L +
Sbjct: 195 RRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 242
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK+L+++VQ + +G+
Sbjct: 277 RRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMGS 326
>gi|218194467|gb|EEC76894.1| hypothetical protein OsI_15110 [Oryza sativa Indica Group]
Length = 458
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 173 SSMLKSSGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
++M GSS K H ++R+KLK+M +L+ VP ++++ +L E + +LK L+
Sbjct: 232 ATMTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEK 291
Query: 230 EVQNL 234
V+ L
Sbjct: 292 RVEEL 296
>gi|222636798|gb|EEE66930.1| hypothetical protein OsJ_23788 [Oryza sativa Japonica Group]
Length = 555
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 173 SSMLKSSGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
++M GSS K H ++R+KLK+M +L+ VP ++++ +L E + +LK L+
Sbjct: 329 ATMTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEK 388
Query: 230 EVQNL 234
V+ L
Sbjct: 389 RVEEL 393
>gi|168017686|ref|XP_001761378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687384|gb|EDQ73767.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLK 225
+R+++ V VL+ FVPGG +++T +LDEA+ ++K
Sbjct: 380 RRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVK 415
>gi|356510098|ref|XP_003523777.1| PREDICTED: transcription factor bHLH143-like [Glycine max]
Length = 379
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+ K++ ++++LR +PGG + + +LD+A+ LK+LK + Q L
Sbjct: 330 KKDKIRDVLSILRSIIPGGKDKDPAMLLDDAIHCLKNLKHKAQAL 374
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L
Sbjct: 167 RRRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQLQVQMLSA 214
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
G +++ HN ++R ++ + + L+ +P N+++ +L+EA+ +LK+L+++VQ +
Sbjct: 268 GRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 325
>gi|255565212|ref|XP_002523598.1| DNA binding protein, putative [Ricinus communis]
gi|223537160|gb|EEF38793.1| DNA binding protein, putative [Ricinus communis]
Length = 278
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 198 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 231
>gi|42408644|dbj|BAD09865.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|125561863|gb|EAZ07311.1| hypothetical protein OsI_29558 [Oryza sativa Indica Group]
gi|125603724|gb|EAZ43049.1| hypothetical protein OsJ_27638 [Oryza sativa Japonica Group]
Length = 246
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 180 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 213
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ
Sbjct: 231 RRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQ 274
>gi|115479527|ref|NP_001063357.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|51535231|dbj|BAD38280.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|51536285|dbj|BAD38453.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|113631590|dbj|BAF25271.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|125563981|gb|EAZ09361.1| hypothetical protein OsI_31634 [Oryza sativa Indica Group]
gi|215697773|dbj|BAG91966.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765762|dbj|BAG87459.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 236
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 170 LQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSL 203
>gi|357445939|ref|XP_003593247.1| Transcription factor bHLH143 [Medicago truncatula]
gi|355482295|gb|AES63498.1| Transcription factor bHLH143 [Medicago truncatula]
Length = 344
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 69/244 (28%)
Query: 60 KNFIIFDQTDHRSQIMFHPA--IAHKFMGPSFNFHATYIQDNFERHDATNVGREMA---- 113
K FIIFD++D ++++ + P + + + F Y N ERH ATN G++
Sbjct: 100 KKFIIFDRSDKKTRLFYSPVFPLVQSPIVTTTQFTQAY-DVNQERH-ATNFGQKHLPKYS 157
Query: 114 --------------SSFKEDSDDIDALLSLEE-----------------GDE-----EEE 137
S ED+++I+ALL ++ DE +E+
Sbjct: 158 LPEESEQDHVVNEESEMHEDTEEINALLCSDDYDSDDDDEVTSTGHSPLADERTYLIQEQ 217
Query: 138 YDEEEVSTARTC----------GIYGSDSP--DSTSTY----------DSEPQHNKFSSM 175
++ E TA + G Y SP DS S+ D+E +H+
Sbjct: 218 IEDTEEDTASSDWPNKRHKLIDGGYTKLSPLVDSASSVRLNEPCECVRDAESKHSDGQMY 277
Query: 176 LKSSGSSSKCHNGK---KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
+ G K+ K+++ + +L PG + + V+DE + +LKSL +
Sbjct: 278 FARQTEDNSAAVGDIQLKKDKIRETLRILEKLTPGAKGKHPLLVIDETIDYLKSLMSQTG 337
Query: 233 NLGV 236
LGV
Sbjct: 338 MLGV 341
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ
Sbjct: 331 RRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQ 374
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ
Sbjct: 242 RRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQ 285
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 170 NKFSSMLKSS--GSSSKCHNG---KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHL 224
NK S +SS +++ HN ++R ++ + + L+ +P N+ + +L+EA+ +L
Sbjct: 347 NKASQRTRSSRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYL 406
Query: 225 KSLKVEVQNLGVG 237
KSL+ ++Q + +G
Sbjct: 407 KSLQFQLQVMWMG 419
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
S++ HN ++R ++ + + L+ +P + + V +LDEA+ +LKSL++++Q L +G
Sbjct: 20 SAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMG 78
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 174 SMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVE 230
SM + +++ HN ++R+K+ + + L+ +P N+ V LD+A+ ++K L+ +
Sbjct: 577 SMSRKRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKSTKVSTLDDAIEYVKWLQSQ 636
Query: 231 VQNLGVGN 238
+Q + G
Sbjct: 637 IQMMSTGQ 644
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 KSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
K +++ HN ++R ++ + + L+ VP N+ + +LDEA+ +LKSL+++VQ
Sbjct: 221 KRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 279
>gi|224135857|ref|XP_002327321.1| predicted protein [Populus trichocarpa]
gi|222835691|gb|EEE74126.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
K+R ++ ++ LR VPG ++++ +L E + HLK LK++ G G
Sbjct: 82 KRRARINAHLDTLRSLVPGTSKMDKASLLAEVISHLKELKIQAAGAGEG 130
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ
Sbjct: 347 RRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQ 390
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P + + V +LDEA+ +LKSL++++Q L +G
Sbjct: 28 RRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQMLVMG 76
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ + +G+
Sbjct: 344 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGS 393
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 KSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
K +++ HN ++R ++ + + L+ VP N+ + +LDEA+ +LKSL+++VQ
Sbjct: 224 KRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 282
>gi|357141633|ref|XP_003572294.1| PREDICTED: uncharacterized protein LOC100835736 [Brachypodium
distachyon]
Length = 252
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 188 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 221
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
+++ HN ++R ++ + + L+ +P N+ + +LDEA+ +LK+L+++VQ + +G
Sbjct: 37 AAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMG 95
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P + + V +LDEA+ +LKSL++++Q L +G
Sbjct: 24 RRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMG 72
>gi|15240189|ref|NP_201507.1| transcription factor HEC1 [Arabidopsis thaliana]
gi|75309085|sp|Q9FHA7.1|HEC1_ARATH RecName: Full=Transcription factor HEC1; AltName: Full=Basic
helix-loop-helix protein 88; Short=AtbHLH88; Short=bHLH
88; AltName: Full=Protein HECATE 1; AltName:
Full=Transcription factor EN 118; AltName: Full=bHLH
transcription factor bHLH088
gi|20127097|gb|AAM10961.1|AF488618_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|10177593|dbj|BAB10940.1| unnamed protein product [Arabidopsis thaliana]
gi|110737755|dbj|BAF00816.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332010913|gb|AED98296.1| transcription factor HEC1 [Arabidopsis thaliana]
Length = 241
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 151 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ + +G+
Sbjct: 344 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGS 393
>gi|356565592|ref|XP_003551023.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 299
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ L
Sbjct: 177 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 210
>gi|297811073|ref|XP_002873420.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
gi|297319257|gb|EFH49679.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+R++K LK +++ L
Sbjct: 141 LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 174
>gi|219363295|ref|NP_001136892.1| uncharacterized protein LOC100217048 [Zea mays]
gi|194697492|gb|ACF82830.1| unknown [Zea mays]
gi|414589607|tpg|DAA40178.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 27/35 (77%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA++++K LK ++Q+L
Sbjct: 186 ALQRLVPGGTKMDTASMLDEAIQYVKFLKSQLQSL 220
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 39/63 (61%)
Query: 177 KSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+S+ S + K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L
Sbjct: 215 RSATESQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSS 274
Query: 237 GNM 239
M
Sbjct: 275 DEM 277
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 180 GSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
G +++ HN ++R ++ + + L+ +P N+++ +LDEA+ +LK+L+++VQ
Sbjct: 3 GRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQ 58
>gi|357445937|ref|XP_003593246.1| Transcription factor bHLH143 [Medicago truncatula]
gi|355482294|gb|AES63497.1| Transcription factor bHLH143 [Medicago truncatula]
Length = 426
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 69/244 (28%)
Query: 60 KNFIIFDQTDHRSQIMFHPA--IAHKFMGPSFNFHATYIQDNFERHDATNVGREMA---- 113
K FIIFD++D ++++ + P + + + F Y N ERH ATN G++
Sbjct: 182 KKFIIFDRSDKKTRLFYSPVFPLVQSPIVTTTQFTQAY-DVNQERH-ATNFGQKHLPKYS 239
Query: 114 --------------SSFKEDSDDIDALLSLEE-----------------GDE-----EEE 137
S ED+++I+ALL ++ DE +E+
Sbjct: 240 LPEESEQDHVVNEESEMHEDTEEINALLCSDDYDSDDDDEVTSTGHSPLADERTYLIQEQ 299
Query: 138 YDEEEVSTARTC----------GIYGSDSP--DSTSTY----------DSEPQHNKFSSM 175
++ E TA + G Y SP DS S+ D+E +H+
Sbjct: 300 IEDTEEDTASSDWPNKRHKLIDGGYTKLSPLVDSASSVRLNEPCECVRDAESKHSDGQMY 359
Query: 176 LKSSGSSSKCHNGK---KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
+ G K+ K+++ + +L PG + + V+DE + +LKSL +
Sbjct: 360 FARQTEDNSAAVGDIQLKKDKIRETLRILEKLTPGAKGKHPLLVIDETIDYLKSLMSQTG 419
Query: 233 NLGV 236
LGV
Sbjct: 420 MLGV 423
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LKSL++++Q + +G+
Sbjct: 329 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGS 378
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LKSL++++Q + +G+
Sbjct: 329 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGS 378
>gi|356511883|ref|XP_003524651.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 273
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ L
Sbjct: 174 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 207
>gi|218188514|gb|EEC70941.1| hypothetical protein OsI_02533 [Oryza sativa Indica Group]
Length = 448
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 173 SSMLKSSGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
+ M +++GSS K H ++R+KL +M L+ VP ++++ +L E + +LK L+
Sbjct: 276 AWMNRAAGSSIKNHVMSERRRREKLNEMFLTLKSLVPSIDKVDKASILAETIAYLKELER 335
Query: 230 EVQNLGVG 237
VQ L G
Sbjct: 336 RVQELESG 343
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 40/75 (53%)
Query: 164 DSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRH 223
+ EP ++ + + ++R ++ + + L+ +P N+ + +LDEA+ +
Sbjct: 237 ECEPAQRTTTAKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEY 296
Query: 224 LKSLKVEVQNLGVGN 238
LKSL++++Q + +G
Sbjct: 297 LKSLQLQLQVVWMGG 311
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 168 QHNKFSSMLKSSGSSSKCHNG---KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHL 224
+ N SS+ ++ HN K+R K+ + + L+ VP N+ + +LDE + +L
Sbjct: 280 KENAKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYL 339
Query: 225 KSLKVEVQ 232
K L+ +VQ
Sbjct: 340 KQLQAQVQ 347
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 KSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
K +++ HN ++R ++ + + L+ VP N+ + +LDEA+ +LKSL+++VQ
Sbjct: 324 KRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 382
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 168 QHNKFSSMLKSSGSSSKCHNG---KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHL 224
+ N SS+ ++ HN K+R K+ + + L+ VP N+ + +LDE + +L
Sbjct: 280 KENAKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYL 339
Query: 225 KSLKVEVQ 232
K L+ +VQ
Sbjct: 340 KQLQAQVQ 347
>gi|225438169|ref|XP_002262764.1| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
Length = 358
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
K+R+KL + L VPG + + V VL EAV++LK L+ V+ L V
Sbjct: 188 KRREKLTQRFIALSALVPGLRKTDKVSVLGEAVKYLKQLQERVKMLEV 235
>gi|297819712|ref|XP_002877739.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
gi|297323577|gb|EFH53998.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 141 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 174
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 33/50 (66%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LKSL++++Q + +G
Sbjct: 289 RRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGG 338
>gi|297797671|ref|XP_002866720.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
gi|297312555|gb|EFH42979.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 151 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 164 DSEPQHNKFSSMLKSSGSSSKCHNG---KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEA 220
D + + N SS+ ++ HN K+R K+ + + L+ VP ++ + +LDE
Sbjct: 266 DDKQKANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEV 325
Query: 221 VRHLKSLKVEVQNLGVGNMK 240
+ +LK L+ +VQ + N++
Sbjct: 326 IEYLKQLQAQVQMMSRMNIQ 345
>gi|356496900|ref|XP_003517303.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 251
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ L
Sbjct: 168 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 201
>gi|297816208|ref|XP_002875987.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
gi|297321825|gb|EFH52246.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
K+R+ + K + L+ +P ++ + VLDEA+ ++K+L+++VQ + +GN
Sbjct: 142 KQRRDINKKMRTLQDLLPNSHKDDNESVLDEAINYMKNLQLQVQMMTMGN 191
>gi|449448090|ref|XP_004141799.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 393
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV---QNLG 235
VL+ VPGG++++T +LDEA +LK LK ++ +NLG
Sbjct: 308 VLQRLVPGGSKMDTASMLDEAANYLKFLKSQIKALENLG 346
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 33/50 (66%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LKSL++++Q + +G
Sbjct: 280 RRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGG 329
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 32/49 (65%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
++R ++ + + L+ +P N+ + +L+EA+ +LKSL+ ++Q + +G
Sbjct: 371 RRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMWMG 419
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELN-TVGVLDEAVRHLKSLKVEVQNLGV 236
+R+K+ + + +L+ VPG N+++ T VLDE + H++SL+ +V+ L +
Sbjct: 195 RREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQCQVEFLSM 242
>gi|162461234|ref|NP_001106073.1| anthocyanin regulatory R-S protein [Zea mays]
gi|114217|sp|P13027.1|ARRS_MAIZE RecName: Full=Anthocyanin regulatory R-S protein
gi|22472|emb|CAA33805.1| unnamed protein product [Zea mays]
Length = 612
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL +M VL+ +P + +N +L E + +LK L+ VQ L
Sbjct: 425 KRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQEL 470
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 33/50 (66%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LKSL++++Q + +G
Sbjct: 280 RRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGG 329
>gi|22327493|ref|NP_680372.1| transcription factor GLABRA 3 [Arabidopsis thaliana]
gi|75309232|sp|Q9FN69.1|GL3_ARATH RecName: Full=Transcription factor GLABRA 3; AltName: Full=Basic
helix-loop-helix protein 1; Short=AtMYC6; Short=AtbHLH1;
Short=bHLH 1; AltName: Full=Protein SHAPESHIFTER;
AltName: Full=Transcription factor EN 31; AltName:
Full=bHLH transcription factor bHLH001
gi|9758040|dbj|BAB08503.1| bHLH transcription factor-like protein [Arabidopsis thaliana]
gi|17224395|gb|AAL36964.1| bHLH-transcription factor [Arabidopsis thaliana]
gi|332007281|gb|AED94664.1| transcription factor GLABRA 3 [Arabidopsis thaliana]
Length = 637
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL + LR +P N+++ V +LD+ + +L+ L+ VQ L
Sbjct: 448 KRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 30/43 (69%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
+R+++ + + +L+ VPGG +++T +LDEA+ ++ LK + +
Sbjct: 116 RRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVXFLKTQTE 158
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LKSL++++Q + +G+
Sbjct: 310 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGS 359
>gi|356541813|ref|XP_003539367.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 242
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ L
Sbjct: 159 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 192
>gi|297817562|ref|XP_002876664.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
gi|297322502|gb|EFH52923.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
K+R+ + K + L+ +P +E + +LDEA+ ++K+L+++VQ + +GN
Sbjct: 187 KQRRDVNKKMRTLQDLLPNSHEDDNESMLDEAINYMKNLQLQVQMMTMGN 236
>gi|8052457|emb|CAB92300.1| transcription factor [Zea mays]
Length = 611
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL +M VL+ +P + +N +L E + +LK L+ VQ L
Sbjct: 425 KRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQEL 470
>gi|296088946|emb|CBI38512.3| unnamed protein product [Vitis vinifera]
Length = 334
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
K+R+KL + L VPG + + V VL EAV++LK L+ V+ L V
Sbjct: 164 KRREKLTQRFIALSALVPGLRKTDKVSVLGEAVKYLKQLQERVKMLEV 211
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 157 PDSTSTYDSEP---QHNKFSSMLKSSGSSSK--------CHNGKKRQKLKKMVNVLRGFV 205
P S+ + SE + N +SS K+ +S+ + K+R+++ + + +L+ V
Sbjct: 170 PQSSGSCTSEEGNFEGNTYSSAKKTCTRASRGGATDPQSLYARKRRERINERLRILQNLV 229
Query: 206 PGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
P G +++ +L+EA +++K L+++++ L +M
Sbjct: 230 PNGTKVDISTMLEEAAQYVKFLQLQIKLLSSDDM 263
>gi|15229725|ref|NP_190602.1| transcription factor HEC2 [Arabidopsis thaliana]
gi|75313649|sp|Q9SND4.1|HEC2_ARATH RecName: Full=Transcription factor HEC2; AltName: Full=Basic
helix-loop-helix protein 37; Short=AtbHLH37; Short=bHLH
37; AltName: Full=Protein HECATE 2; AltName:
Full=Transcription factor EN 117; AltName: Full=bHLH
transcription factor bHLH037
gi|6523044|emb|CAB62312.1| putative protein [Arabidopsis thaliana]
gi|37202028|gb|AAQ89629.1| At3g50330 [Arabidopsis thaliana]
gi|51969500|dbj|BAD43442.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|51969966|dbj|BAD43675.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|332645132|gb|AEE78653.1| transcription factor HEC2 [Arabidopsis thaliana]
Length = 231
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 148 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181
>gi|357482887|ref|XP_003611730.1| Transcription factor HEC2 [Medicago truncatula]
gi|355513065|gb|AES94688.1| Transcription factor HEC2 [Medicago truncatula]
Length = 247
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ L
Sbjct: 166 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 199
>gi|51970182|dbj|BAD43783.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
Length = 231
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 148 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181
>gi|357457929|ref|XP_003599245.1| Inducer of CBF expression [Medicago truncatula]
gi|355488293|gb|AES69496.1| Inducer of CBF expression [Medicago truncatula]
Length = 373
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 177 KSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K + S S K+R+KLK ++ LR VP ++++ V +L +AV +LK LK ++ +L
Sbjct: 191 KENPSKSLIAERKRRKKLKNNMHKLRSVVPKISKMDKVSILGDAVDYLKELKQQINDL 248
>gi|225438732|ref|XP_002277850.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|296082413|emb|CBI21418.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
L+ VPGG +++T +LDEA+ ++K LK +VQ+L
Sbjct: 173 LQRLVPGGTKMDTASMLDEAIHYVKFLKNQVQSL 206
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Query: 180 GSSSKCHNG--------KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
GSS + H+G ++R K+ + L+ VPG ++ N LD+ + ++KSL+ +V
Sbjct: 173 GSSRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKSNQASTLDQTIHYMKSLQHQV 232
Query: 232 QNL 234
Q +
Sbjct: 233 QAM 235
>gi|242037067|ref|XP_002465928.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
gi|241919782|gb|EER92926.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
Length = 287
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 181 SSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
S K ++R+++ + L +PG ++LNT +L+EA RH+K L+ +V L +
Sbjct: 153 SVQKSAARQRRKRISEKTAELARLIPGAHKLNTAEMLEEAARHVKLLQAQVGVLAL 208
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ VP N+ + +LDEA+ +LKSL+++VQ
Sbjct: 415 RRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 458
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+++ HN ++R ++ + + L+ +P ++ + +LD+A+ +LK L+++VQ L + N
Sbjct: 33 AAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRN 92
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
+++ HN ++R ++ + + L+ +P ++ + +LDEA+ +LK L+++VQ L V
Sbjct: 139 AAEVHNLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQLQVQGLSV 196
>gi|255549698|ref|XP_002515900.1| DNA binding protein, putative [Ricinus communis]
gi|223544805|gb|EEF46320.1| DNA binding protein, putative [Ricinus communis]
Length = 395
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 200 VLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV---QNLG 235
VL+ VPGG++++T +LDEA +LK L+ +V +NLG
Sbjct: 312 VLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENLG 350
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 177 KSSGSSSKCHNG---KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
K +++ HN ++R ++ + + L+ VP N+ + +LDEA+ +LKSL+++VQ
Sbjct: 139 KRRARAAEVHNQSERRRRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQVQ 197
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 15/84 (17%)
Query: 158 DSTSTYDSEPQHNKFSSMLKSSGSSSKCHNG--------KKRQKLKKMVNVLRGFVPGGN 209
DST Y S S K++G + + H ++R+K+ + LR VPG +
Sbjct: 1 DSTENYYS------CGSRKKATGGARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCD 54
Query: 210 EL-NTVGVLDEAVRHLKSLKVEVQ 232
+ N +LD+ ++H+KSL+ ++Q
Sbjct: 55 DKSNQASILDQTIQHIKSLQQQIQ 78
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 147 RTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSS-----SKCHNGKKR-QKLKKMVNV 200
R GI D +D+E H S+ K+ S S+ H KKR Q++ + + +
Sbjct: 65 RNIGIKRKFQVDQERDHDNEV-HAALSAPRKNGKKSRAAKDSQSHYAKKRRQRINERLRI 123
Query: 201 LRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
L+ +P G +++ +L+EAV+++K L ++++ L M
Sbjct: 124 LQKLIPNGTKVDISTMLEEAVQYVKFLHLQIKLLSSDEM 162
>gi|227016417|gb|ACP18670.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 99
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 27/37 (72%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLK 225
++R ++ VLR VPGG++++TV +L++A+ ++K
Sbjct: 63 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVK 99
>gi|297821501|ref|XP_002878633.1| hypothetical protein ARALYDRAFT_481138 [Arabidopsis lyrata subsp.
lyrata]
gi|297324472|gb|EFH54892.1| hypothetical protein ARALYDRAFT_481138 [Arabidopsis lyrata subsp.
lyrata]
Length = 321
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSL-----KVEVQNLGVGNM 239
K+RQKL + + L +PG + + VL++A++HLK L K+E + +G NM
Sbjct: 140 KRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVGTKNM 195
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R K+ + + L+ VP ++ + +LDE + +LK L+ +VQ + NM
Sbjct: 281 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNRINM 331
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 281 KRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 326
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 281 KRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 326
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 33/50 (66%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK+L+++VQ + +G
Sbjct: 326 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMGG 375
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 241 KRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 30/50 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ VP ++ + +LDE + +LK L+ +VQ + V N
Sbjct: 234 RRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSVRN 283
>gi|33302446|gb|AAQ01815.1| BHLH protein [Zea mays]
Length = 609
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL +M VL+ +P + +N +L E + +LK L+ VQ L
Sbjct: 422 KQREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQEL 467
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 30/50 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ VP ++ + +LDE + +LK L+ +VQ + V N
Sbjct: 196 RRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSVRN 245
>gi|223702404|gb|ACN21633.1| putative basic helix-loop-helix protein BHLH9 [Lotus japonicus]
Length = 165
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ +P N+ + +LDEA+ +LK L+++VQ L + N
Sbjct: 86 RRRSRINENMKALQNLIPNSNKTDKAFMLDEAIDYLKQLQLQVQMLSLRN 135
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 155 DSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNEL 211
DS ++ + +SEP +++ + HN ++R K+ + + L+ VP ++
Sbjct: 28 DSEEALGSSESEPAGRPRGKRARAA----EVHNLSEKRRRCKINEKMKALQSLVPNSSKT 83
Query: 212 NTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+ +LD+A+ +LK L+++VQ L + N
Sbjct: 84 DKASMLDDAIEYLKHLQLQVQMLSMRN 110
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 36/51 (70%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + VL+ VP G +++ +L+EAV+++K L+++++ L +M
Sbjct: 235 KRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDM 285
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 143 VSTARTCGIYGSDSPDSTSTY--DSEPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKM 197
+ A + GS++ D ST +SEP + + G ++ H+ +R+K+ +
Sbjct: 85 LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 144
Query: 198 VNVLRGFVPGGNEL-NTVGVLDEAVRHLKSLKVEVQNL 234
+ +L+ VPG N++ VLDE + +++SL+ +V+ L
Sbjct: 145 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFL 182
>gi|389827984|gb|AFL02462.1| transcription factor MYC1 [Fragaria x ananassa]
Length = 368
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL + ++L+ VP + + V +LD+A+ +LK L+ +V+ L
Sbjct: 176 KRREKLNERFSILKSLVPSIRKDDKVSILDDAIEYLKDLEKKVEEL 221
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 102 RHDATNVGREMASSFKEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTS 161
R A NVG + + S D D+ +++ G + S A +S D
Sbjct: 162 RKSARNVGEAKRAKRAKKSGDEDSSMAIRNGSPTSCCTSDSDSNASL------ESADGDG 215
Query: 162 TYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAV 221
D+ K + ++ + K+R+++ + + +L+ VP G +++ +L+EAV
Sbjct: 216 DADARRPKGKGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVDISTMLEEAV 275
Query: 222 RHLKSLKVEVQNL 234
++K L+++++ L
Sbjct: 276 HYVKFLQLQIRLL 288
>gi|18568238|gb|AAL75975.1|AF466203_4 regulatory protein [Zea mays]
gi|414585919|tpg|DAA36490.1| TPA: colored plant1 [Zea mays]
Length = 557
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL +M VL+ VP ++++ +L E + +LK L+ VQ L
Sbjct: 387 KRREKLNEMFLVLKSLVPSIHKVDKASILAETIAYLKELQRRVQEL 432
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 150 GIYGSDSPDST-----STYDSEPQHNKFSSMLKSSGSSS---KCHNGKKRQKLKKMVNVL 201
G+ GS P ++ + Y+ P N+ GS++ H +R+K+ + + L
Sbjct: 417 GLRGSSCPGNSVSQMMAIYEFGPALNRNGRPRVQRGSATDPQSVHARARREKIAERLRKL 476
Query: 202 RGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
+ +P G +++ V +LDEAV +++ LK +V
Sbjct: 477 QHLIPNGGKVDIVTMLDEAVHYVQFLKRQV 506
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 179 SGSSSKCHNGK-KRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
S SS+ + K +RQ++ + + +L+ +P G +++ +L+EA++++K L ++++ L
Sbjct: 114 SAESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLSSD 173
Query: 238 NM 239
M
Sbjct: 174 EM 175
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+K+ + + VL+ VP G +++ +L+EAV ++K ++++++ L +M
Sbjct: 263 KRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLLSSDDM 313
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+++ HN ++R ++ + + L+ +P ++ + +LD+A+ +LK L+++VQ L + N
Sbjct: 47 AAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRN 106
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 33/48 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
K+R+++ + + +L+ VP G +++ +L+EA +++K L+++++ L
Sbjct: 211 KRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLSC 258
>gi|162463519|ref|NP_001105706.1| colored plant1 [Zea mays]
gi|22195|emb|CAA40544.1| regulatory protein [Zea mays]
Length = 562
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL +M VL+ VP ++++ +L E + +LK L+ VQ L
Sbjct: 392 KRREKLNEMFLVLKSLVPSIHKVDKASILAETIAYLKELQRRVQEL 437
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+K+ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 263 RRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 308
>gi|359475553|ref|XP_002268443.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
gi|147839680|emb|CAN75020.1| hypothetical protein VITISV_039940 [Vitis vinifera]
Length = 331
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 140 EEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNG---------KK 190
+EE ++++ + SD S ++++ K S K +++ H+ K+
Sbjct: 106 KEEAVSSKSSATFPSDGLVSQGLFENQNYVFKASQGAKRISTTTARHSQTQDHIIAERKR 165
Query: 191 RQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
R+KL + L VPG +++ VL +A+++LK L+ V+ L
Sbjct: 166 REKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 209
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 154 SDSPDSTSTYDSEPQHNKFSSML--KSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGG 208
SDSP + + + K S K +++ HN ++R ++ + + L+ +P
Sbjct: 295 SDSPSEDAECEEASEETKPSRRYGTKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHC 354
Query: 209 NELNTVGVLDEAVRHLKSLKVEVQ 232
N+ + +LDE + +LKSL+++VQ
Sbjct: 355 NKTDKASILDETIEYLKSLQMQVQ 378
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 281 KRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 326
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 20/99 (20%)
Query: 156 SPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNG--------------------KKRQKLK 195
S STSTY SE + N + +S NG K+R+++
Sbjct: 148 SRQSTSTYCSEDESNASLDQNGGANNSRSSLNGANKSRASRGSATDPQSLYARKRRERIN 207
Query: 196 KMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+ + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 208 ERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 246
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 48/87 (55%)
Query: 148 TCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPG 207
+C G DS ++ Q + S + S + + K+R+++ + + VL+ +P
Sbjct: 139 SCCSSGEDSIGTSEKSIVANQSDNTSGCKRPSKNMQSLYAKKRRERINEKLRVLQQLIPN 198
Query: 208 GNELNTVGVLDEAVRHLKSLKVEVQNL 234
G +++ +L+EAV+++K L+++++ L
Sbjct: 199 GTKVDISTMLEEAVQYVKFLQLQIKVL 225
>gi|297736346|emb|CBI25069.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 140 EEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNG---------KK 190
+EE ++++ + SD S ++++ K S K +++ H+ K+
Sbjct: 119 KEEAVSSKSSATFPSDGLVSQGLFENQNYVFKASQGAKRISTTTARHSQTQDHIIAERKR 178
Query: 191 RQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
R+KL + L VPG +++ VL +A+++LK L+ V+ L
Sbjct: 179 REKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 222
>gi|15425627|dbj|BAB64301.1| R-type basic helix-loop-helix protein [Oryza sativa]
Length = 588
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 173 SSMLKSSGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
++ + + GSS K H ++R+KL +M +L+ VP + ++ +L E + +LK L+
Sbjct: 387 AAAMTTQGSSIKNHVMSERRRREKLNEMFLILKSVVPSIHRVDKASILAETIAYLKELEK 446
Query: 230 EVQNL 234
V+ L
Sbjct: 447 RVEEL 451
>gi|125526531|gb|EAY74645.1| hypothetical protein OsI_02537 [Oryza sativa Indica Group]
Length = 420
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R+KL +M +L+ VP ++++ +L E + +LK L+ VQ L G
Sbjct: 245 RRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGK 294
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+++ HN ++R ++ + + L+ +P N+ + +LDEA+ +LK L++++Q L G+
Sbjct: 21 AAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVLSPGS 80
Query: 239 MK 240
K
Sbjct: 81 SK 82
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 151 IYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNE 210
+ GS SP ++ +S+ +K + S+ + K+R+++ + + +L+ VP G +
Sbjct: 236 LNGSSSPKGSAALNSK---DKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK 292
Query: 211 LNTVGVLDEAVRHLKSLKVEVQNL 234
++ +L+EAV ++K L+++++ L
Sbjct: 293 VDISTMLEEAVEYVKFLQLQIKLL 316
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 153 GSDSPDSTSTYDS-----EPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGF 204
G+DS +S+ D EP + + G ++ H+ +R+K+ + + +L+
Sbjct: 101 GTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 160
Query: 205 VPGGNE-LNTVGVLDEAVRHLKSLKVEVQNLGV 236
VPG N+ + VLDE + +++SL+ +V+ L +
Sbjct: 161 VPGCNKVIGKASVLDEIINYIQSLQHQVEFLSM 193
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ
Sbjct: 208 RRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQ 251
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 153 GSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELN 212
GS SP ++ +S+ +K + S+ + K+R+++ + + +L+ VP G +++
Sbjct: 243 GSSSPKGSAALNSK---DKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD 299
Query: 213 TVGVLDEAVRHLKSLKVEVQNL 234
+L+EAV ++K L+++++ L
Sbjct: 300 ISTMLEEAVEYVKFLQLQIKLL 321
>gi|224071909|ref|XP_002303592.1| predicted protein [Populus trichocarpa]
gi|222841024|gb|EEE78571.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 35/55 (63%)
Query: 180 GSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
G+S ++R+KL K +L+ VP ++++ V +LD+ +++L+ L+ +V+ L
Sbjct: 426 GASHVLSERRRREKLNKRFMILKSIVPSISKVDKVSILDDTIQYLQELERKVEEL 480
>gi|52075730|dbj|BAD44950.1| regulatory protein B-Peru-like [Oryza sativa Japonica Group]
gi|52077560|dbj|BAD45121.1| regulatory protein B-Peru-like [Oryza sativa Japonica Group]
Length = 370
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 175 MLKSSGSSS-KCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVE 230
M +++GS S K H ++R+KL +M +L+ VP ++++ +L E + +LK L+
Sbjct: 177 MNRAAGSCSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERR 236
Query: 231 VQNLGVGN 238
VQ L G
Sbjct: 237 VQELESGK 244
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 264 KRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 309
>gi|297821098|ref|XP_002878432.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
gi|297324270|gb|EFH54691.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
K+R+ + K + L+ +P ++ + +LDEA+ ++K+LK++VQ + +GN
Sbjct: 166 KQRRDINKKMRTLQDLLPNSHKDDNESMLDEAIIYMKNLKLQVQMMTMGN 215
>gi|159141924|gb|ABW89744.1| putative anthocyanin regulatory Lc protein [Oryza sativa Indica
Group]
gi|159141926|gb|ABW89745.1| putative anthocyanin regulatory Lc protein [Oryza sativa Japonica
Group]
Length = 588
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 173 SSMLKSSGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
++ + + GSS K H ++R+KL +M +L+ VP + ++ +L E + +LK L+
Sbjct: 387 AAAMTTQGSSIKNHVMSERRRREKLNEMFLILKSVVPSIHRVDKASILAETIAYLKELEK 446
Query: 230 EVQNL 234
V+ L
Sbjct: 447 RVEEL 451
>gi|218195357|gb|EEC77784.1| hypothetical protein OsI_16953 [Oryza sativa Indica Group]
Length = 553
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 173 SSMLKSSGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
++ + + GSS K H ++R+KL +M +L+ VP ++++ +L E + +LK L+
Sbjct: 369 AAAMTTQGSSIKNHVMSERRRREKLNEMFLILKSVVPSIHKVDKASILAETIAYLKELEK 428
Query: 230 EVQNL 234
V+ L
Sbjct: 429 RVEEL 433
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 151 IYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNE 210
+ GS SP ++ +S+ +K + S+ + K+R+++ + + +L+ VP G +
Sbjct: 237 LNGSSSPKGSAALNSK---DKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK 293
Query: 211 LNTVGVLDEAVRHLKSLKVEVQNL 234
++ +L+EAV ++K L+++++ L
Sbjct: 294 VDISTMLEEAVEYVKFLQLQIKLL 317
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L
Sbjct: 281 KRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLL 326
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ +P N+ + +LDEA+ +LKSL+++VQ
Sbjct: 217 RRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQ 260
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R K+ + + +L+ VP ++ + +LDE + +LK L+ +V + NM
Sbjct: 226 KRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNM 276
>gi|359489618|ref|XP_003633950.1| PREDICTED: transcription factor GLABRA 3 isoform 2 [Vitis vinifera]
Length = 659
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 176 LKSSGSSSKCH----NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
L SGS C + KKR+K K +V LR VP N+++ V +L + + +LK L+ V
Sbjct: 450 LWKSGSDGICKQHALSDKKREKEKFLV--LRSMVPSINKIDEVSILGDTIEYLKKLEARV 507
Query: 232 QNL 234
+ L
Sbjct: 508 EEL 510
>gi|297840129|ref|XP_002887946.1| hypothetical protein ARALYDRAFT_474990 [Arabidopsis lyrata subsp.
lyrata]
gi|297333787|gb|EFH64205.1| hypothetical protein ARALYDRAFT_474990 [Arabidopsis lyrata subsp.
lyrata]
Length = 596
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL + LR +P ++++ V +LD+ + +L+ L+ VQ L
Sbjct: 412 KRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQELQKRVQEL 457
>gi|115459864|ref|NP_001053532.1| Os04g0557800 [Oryza sativa Japonica Group]
gi|38345755|emb|CAE03483.2| OSJNBa0065O17.8 [Oryza sativa Japonica Group]
gi|113565103|dbj|BAF15446.1| Os04g0557800 [Oryza sativa Japonica Group]
Length = 574
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 173 SSMLKSSGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
++ + + GSS K H ++R+KL +M +L+ VP + ++ +L E + +LK L+
Sbjct: 387 AAAMTTQGSSIKNHVMSERRRREKLNEMFLILKSVVPSIHRVDKASILAETIAYLKELEK 446
Query: 230 EVQNL 234
V+ L
Sbjct: 447 RVEEL 451
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 31/48 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
++R ++ + + L+ +P N+ + +LDEA+ +LK L++++Q + +
Sbjct: 606 RRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMMSI 653
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L +M
Sbjct: 304 KRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDM 354
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L +M
Sbjct: 304 KRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDM 354
>gi|3738091|gb|AAC63588.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 322
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+RQKL + + L +PG + + VL++A++HLK L+ V+ L
Sbjct: 139 KRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKL 184
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 182 SSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
+++ HN ++R ++ + + L+ +P N+ + +LDEA+ +LK L++++Q L G+
Sbjct: 21 AAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVLSPGS 80
Query: 239 MK 240
K
Sbjct: 81 SK 82
>gi|15222504|ref|NP_176552.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|42571979|ref|NP_974080.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|334183608|ref|NP_001185302.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|34222624|sp|Q9CAD0.1|EGL1_ARATH RecName: Full=Transcription factor EGL1; AltName: Full=Basic
helix-loop-helix protein 2; Short=AtMYC146;
Short=AtbHLH2; Short=bHLH 2; AltName: Full=Protein
ENHANCER OF GLABRA 3; AltName: Full=Transcription factor
EN 30; AltName: Full=bHLH transcription factor bHLH002
gi|12324939|gb|AAG52418.1|AC011622_6 putative transcription factor; 68971-66046 [Arabidopsis thaliana]
gi|18026952|gb|AAL55709.1|AF251687_1 putative transcription factor BHLH2 [Arabidopsis thaliana]
gi|225898046|dbj|BAH30355.1| hypothetical protein [Arabidopsis thaliana]
gi|332196003|gb|AEE34124.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|332196004|gb|AEE34125.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|332196005|gb|AEE34126.1| transcription factor EGL1 [Arabidopsis thaliana]
Length = 596
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL + LR +P ++++ V +LD+ + +L+ L+ VQ L
Sbjct: 412 KRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL 457
>gi|414885808|tpg|DAA61822.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 228
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 179 SGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVE 230
SG +S+ H+ K+RQ++ + LR +P + ++ +L E VRH++ L+ E
Sbjct: 29 SGGTSRSHSEAERKRRQRINAHLATLRTLLPAASRMDKAALLGEVVRHVRELRGE 83
>gi|147834195|emb|CAN75308.1| hypothetical protein VITISV_040405 [Vitis vinifera]
Length = 583
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 176 LKSSGSSSKCH----NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
L SGS C + KKR+K K +V LR VP N+++ V +L + + +LK L+ V
Sbjct: 374 LWKSGSDGICKQHALSDKKREKEKFLV--LRSMVPSINKIDEVSILGDTIEYLKKLEARV 431
Query: 232 QNL 234
+ L
Sbjct: 432 EEL 434
>gi|187936004|gb|ABM92332.3| myc anthocyanin regulatory protein [Vitis vinifera]
Length = 654
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 176 LKSSGSSSKCH----NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
L SGS C + KKR+K K +V LR VP N+++ V +L + + +LK L+ V
Sbjct: 445 LWKSGSDGICKQHALSDKKREKEKFLV--LRSMVPSINKIDEVSILGDTIEYLKKLEARV 502
Query: 232 QNL 234
+ L
Sbjct: 503 EEL 505
>gi|222636338|gb|EEE66470.1| hypothetical protein OsJ_22880 [Oryza sativa Japonica Group]
Length = 553
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 173 SSMLKSSGSSSKCH---NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKV 229
++ + + GSS K H ++R+KL +M +L+ VP + ++ +L E + +LK L+
Sbjct: 369 AAAMTTQGSSIKNHVMSERRRREKLNEMFLILKSVVPSIHRVDKASILAETIAYLKELEK 428
Query: 230 EVQNL 234
V+ L
Sbjct: 429 RVEEL 433
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ +P G +++ +L+EAV ++K L+++++ L +M
Sbjct: 249 KRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDM 299
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ +P G +++ +L+EAV ++K L+++++ L +M
Sbjct: 249 KRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDM 299
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ +P G +++ +L+EAV ++K L+++++ L +M
Sbjct: 249 KRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDM 299
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L ++
Sbjct: 278 KRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDL 328
>gi|225454234|ref|XP_002274163.1| PREDICTED: transcription factor GLABRA 3 isoform 1 [Vitis vinifera]
Length = 654
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 176 LKSSGSSSKCH----NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
L SGS C + KKR+K K +V LR VP N+++ V +L + + +LK L+ V
Sbjct: 445 LWKSGSDGICKQHALSDKKREKEKFLV--LRSMVPSINKIDEVSILGDTIEYLKKLEARV 502
Query: 232 QNL 234
+ L
Sbjct: 503 EEL 505
>gi|297745295|emb|CBI40375.3| unnamed protein product [Vitis vinifera]
Length = 639
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 176 LKSSGSSSKCH----NGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
L SGS C + KKR+K K +V LR VP N+++ V +L + + +LK L+ V
Sbjct: 430 LWKSGSDGICKQHALSDKKREKEKFLV--LRSMVPSINKIDEVSILGDTIEYLKKLEARV 487
Query: 232 QNL 234
+ L
Sbjct: 488 EEL 490
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 254 KRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|449441464|ref|XP_004138502.1| PREDICTED: transcription factor GLABRA 3-like [Cucumis sativus]
gi|449522722|ref|XP_004168375.1| PREDICTED: transcription factor GLABRA 3-like [Cucumis sativus]
Length = 651
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 174 SMLKSSGSSSKCHNGKKRQKLKK--MVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
S+LK G++ C KLK+ L+ +P NE+N V +L++ +++LK L+ V
Sbjct: 443 SILKQ-GNNDSCTKNATLDKLKENEKFMALKSMLPSLNEINKVSILNDTIKYLKMLEARV 501
Query: 232 QNL 234
Q L
Sbjct: 502 QEL 504
>gi|2335192|gb|AAB72192.1| bHLH protein [Arabidopsis thaliana]
Length = 597
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL + LR +P ++++ V +LD+ + +L+ L+ VQ L
Sbjct: 413 KRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL 458
>gi|4519199|dbj|BAA75513.1| MYC-RP [Perilla frutescens]
Length = 620
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 31/46 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+K+ + ++L VP G +++ V +LD + +L+ L+ +V++L
Sbjct: 429 KRREKISERFSILVSLVPSGGKVDKVSILDHTIEYLRELERKVKDL 474
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R K+ + + L+ VP ++ + +LDE + +LK L+ +V + NM
Sbjct: 224 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNM 274
>gi|51970638|dbj|BAD44011.1| putative bHLH transcription factor (bHLH020) [Arabidopsis thaliana]
Length = 320
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+RQKL + + L +PG + + VL++A++HLK L+ V+ L
Sbjct: 139 KRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKL 184
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 158 DSTSTYDSEPQHNKFSSMLKSSGSSSKCHNG----------KKRQKLKKMVNVLRGFVPG 207
D ++ DS+ +K S +L SSG + K+R+++ + + +L+ VP
Sbjct: 249 DDNASKDSD---SKVSEVLSSSGKTRASRGAATDPQSLYARKRRERINERLKILQHIVPN 305
Query: 208 GNELNTVGVLDEAVRHLKSLKVEVQ 232
G +++ +L+EAV ++K L+++++
Sbjct: 306 GTKVDISTMLEEAVHYVKFLQLQIK 330
>gi|79591933|ref|NP_850031.2| transcription factor NAI1 [Arabidopsis thaliana]
gi|75303392|sp|Q8S3F1.1|BH020_ARATH RecName: Full=Transcription factor NAI1; AltName: Full=Basic
helix-loop-helix protein 20; Short=AtbHLH20; Short=bHLH
20; AltName: Full=Transcription factor EN 27; AltName:
Full=bHLH transcription factor bHLH020
gi|20127018|gb|AAM10936.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330252258|gb|AEC07352.1| transcription factor NAI1 [Arabidopsis thaliana]
Length = 320
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+RQKL + + L +PG + + VL++A++HLK L+ V+ L
Sbjct: 139 KRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKL 184
>gi|4519201|dbj|BAA75514.1| MYC-GP [Perilla frutescens]
Length = 620
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 31/46 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+K+ + ++L VP G +++ V +LD + +L+ L+ +V++L
Sbjct: 429 KRREKISERFSILVSLVPSGGKVDKVSILDHTIEYLRELERKVKDL 474
>gi|147845457|emb|CAN83346.1| hypothetical protein VITISV_042277 [Vitis vinifera]
Length = 489
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 194 LKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
+ + + L+ +P N+ + +LDEA+ +LK L+++VQNL
Sbjct: 196 INEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQNL 236
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R K+ + + L+ VP ++ + +LDE + +LK L+ +V + NM
Sbjct: 224 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNM 274
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L ++
Sbjct: 254 KRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 304
>gi|349663684|gb|AEQ04696.1| GL3 [Cucumis sativus]
Length = 651
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 174 SMLKSSGSSSKCHNGKKRQKLKK--MVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEV 231
S+LK G++ C KLK+ L+ +P NE+N V +L++ +++LK L+ V
Sbjct: 443 SILKQ-GNNDSCTKNATLDKLKENEKFMALKSMLPSLNEINKVSILNDTIKYLKMLEARV 501
Query: 232 QNL 234
Q L
Sbjct: 502 QEL 504
>gi|297597059|ref|NP_001043392.2| Os01g0577300 [Oryza sativa Japonica Group]
gi|125570917|gb|EAZ12432.1| hypothetical protein OsJ_02326 [Oryza sativa Japonica Group]
gi|255673385|dbj|BAF05306.2| Os01g0577300 [Oryza sativa Japonica Group]
Length = 265
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R+KL +M +L+ VP ++++ +L E + +LK L+ VQ L G
Sbjct: 90 RRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGK 139
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 31/46 (67%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R ++ + + L+ VP N+ + +LDEA+ +LKSL++++Q +
Sbjct: 248 RRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQLQVM 293
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 35/51 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L ++
Sbjct: 254 KRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 304
>gi|242079519|ref|XP_002444528.1| hypothetical protein SORBIDRAFT_07g023280 [Sorghum bicolor]
gi|241940878|gb|EES14023.1| hypothetical protein SORBIDRAFT_07g023280 [Sorghum bicolor]
Length = 244
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 177 KSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGV 236
K G S K+RQ++ + LR VP + ++ +L E VRH++ L+ + +
Sbjct: 27 KERGRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRAKASDAAA 86
Query: 237 G 237
G
Sbjct: 87 G 87
>gi|3127045|gb|AAC39455.1| bHLH transcription factor JAF13 [Petunia x hybrida]
Length = 628
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
++R+K+ + +L +P G +++ + +LDE + +LK L+ VQ+L
Sbjct: 445 RRREKINERFMLLASMLPAGGKVDKISLLDETIEYLKELERRVQDL 490
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 117 KEDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSML 176
+ED D + + + + E D + + T + + S + + +EP + +
Sbjct: 86 REDDDSAKGVSTSNDANAMNEGDNKRLKTGGSNENHESKAEGEETAKPAEPPKQDYIHVR 145
Query: 177 KSSGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNE-LNTVGVLDEAVRHLKSLKVEVQ 232
G ++ H+ +R+K+ + + +L+ VPG N+ + VLDE + +++SL+ +V+
Sbjct: 146 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 205
Query: 233 NLGV 236
L +
Sbjct: 206 FLSM 209
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 29/44 (65%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ +P N+ + +LDE + +LKSL+++VQ
Sbjct: 241 RRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQ 284
>gi|226495427|ref|NP_001150998.1| DNA binding protein [Zea mays]
gi|195643504|gb|ACG41220.1| DNA binding protein [Zea mays]
Length = 227
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 179 SGSSSKCHN---GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVE 230
SG +S+ H+ K+RQ++ + LR +P + ++ +L E VRH++ L+ E
Sbjct: 28 SGGTSRSHSEAERKRRQRINAHLATLRTLLPAASRMDKAALLGEVVRHVRELRGE 82
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 159 STSTYDSEPQHNKFSSMLKSSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVG-VL 217
S+ D+ PQ K + + S + H+ +R+++ + + +L+ VPG +++ +L
Sbjct: 48 SSVVLDTSPQDKKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALIL 107
Query: 218 DEAVRHLKSLKVEVQNLGV 236
DE + +++SL+ +V+ L +
Sbjct: 108 DEIINYVQSLQNQVEFLSM 126
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 153 GSDSPDSTSTYDS-----EPQHNKFSSMLKSSGSSSKCHN---GKKRQKLKKMVNVLRGF 204
G+DS +S+ D EP + + G ++ H+ +R+K+ + + +L+
Sbjct: 101 GTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 160
Query: 205 VPGGNE-LNTVGVLDEAVRHLKSLKVEVQ 232
VPG N+ + VLDE + +++SL+ +V+
Sbjct: 161 VPGCNKVIGKASVLDEIINYIQSLQHQVE 189
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 30/44 (68%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
++R ++ + + L+ +P N+ + +LDEA+ +LKSL++++Q
Sbjct: 246 RRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQLQ 289
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 32/50 (64%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGN 238
++R ++ + + L+ VP ++ + +LD+A+ +LK L+++VQ L + N
Sbjct: 76 RRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRN 125
>gi|224058495|ref|XP_002299530.1| predicted protein [Populus trichocarpa]
gi|222846788|gb|EEE84335.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 180 GSSSKCHNGKKRQKLKKMVNVLRGFVPGGNE-LNTVGVLDEAVRHLKSLKVEVQNLG 235
G+S K+R+KL K +L+ VP ++ ++ V +LDE + +L+ L+ +V+ LG
Sbjct: 429 GASHALSERKQREKLNKRFMILKSIVPSISKVVDKVSILDETIEYLQELERKVEELG 485
>gi|297735854|emb|CBI18608.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R KL + L VPG +++ + VL +A ++LK L+ VQ L
Sbjct: 180 KRRGKLTQRFIALSALVPGLRKMDKISVLGDAAKYLKQLQERVQKL 225
>gi|359480524|ref|XP_002262843.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
Length = 351
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R KL + L VPG +++ + VL +A ++LK L+ VQ L
Sbjct: 181 KRRGKLTQRFIALSALVPGLRKMDKISVLGDAAKYLKQLQERVQKL 226
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 118 EDSDDIDALLSLEEGDEEEEYDEEEVSTARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLK 177
++S+ D LS E+G++ + + +T G+ + D S Y Q NK M+
Sbjct: 211 DESNGGDTFLSKEDGEDSKALN----LNGKTRASRGA-ATDPQSLYARLKQLNKVHCMMV 265
Query: 178 SSGSSSKCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 266 Q----------KRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 312
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQ 232
K+R K+ + + L+ VP ++ + +LDE + +LK L+ +VQ
Sbjct: 293 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELN-TVGVLDEAVRHLKSLKVEVQNLGV 236
+R+K+ K + L+ VPG N++ G+LDE + +++SL+ +V+ L +
Sbjct: 208 RREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSL 255
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 34/56 (60%)
Query: 184 KCHNGKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K ++RQK+ +M+ L+ +P + + +LD+ + ++KSL+ ++Q +G++
Sbjct: 283 KLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHV 338
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 241 KRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 34/51 (66%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L M
Sbjct: 254 KRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDEM 304
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 145 TARTCGIYGSDSPDSTSTYDSEPQHNKFSSMLKSSGSSS---KCHNGKKRQKLKKMVNVL 201
T+ +Y +S +TS S N + GS++ + K+R+K+ + + L
Sbjct: 168 TSEEHNMYEENSGGTTSASKSTMSLNSNGKARANRGSATDPQSLYARKRREKINERLRTL 227
Query: 202 RGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNM 239
+ VP G +++ +L++A+ ++K L+++++ L +M
Sbjct: 228 QNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLSSDDM 265
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 161 STYDSEPQHNKFSSM-----LKSSGSSSK-----CHN---GKKRQKLKKMVNVLRGFVPG 207
S Y SE SM K SGS+ + HN ++R ++ + + L+ +P
Sbjct: 156 SEYQSEAAELDLDSMAGNNPTKRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELIPH 215
Query: 208 GNELNTVGVLDEAVRHLKSLKVEVQNLGVG 237
+ + +LDEA+ +LKSL++++Q + +G
Sbjct: 216 CYKTDKASMLDEAIEYLKSLQLQLQVMWMG 245
>gi|527655|gb|AAA80172.1| myc-like regulatory R gene product, partial [Cenchrus americanus]
Length = 139
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL +M VL+ VP ++++ +L E + +LK L+ VQ L
Sbjct: 9 KRREKLNEMFLVLKSLVPSIHKVDKASILAETIAYLKELQRRVQEL 54
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 190 KRQKLKKMVNVLRGFVPGGNELN-TVGVLDEAVRHLKSLKVEVQNLGV 236
+R+K+ K + L+ VPG N++ G+LDE + +++SL+ +V+ L +
Sbjct: 208 RREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSL 255
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L
Sbjct: 283 KRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>gi|356514380|ref|XP_003525884.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 347
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+KL + L +PG +++ VL++A++++K L+ V+ L
Sbjct: 183 KRREKLSQRFIALSAIIPGLKKMDKATVLEDAIKYVKQLQERVKTL 228
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L
Sbjct: 280 KRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 325
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 34/46 (73%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV+++K L+++++ L
Sbjct: 254 KRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 33/46 (71%)
Query: 189 KKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNL 234
K+R+++ + + +L+ VP G +++ +L+EAV ++K L+++++ L
Sbjct: 283 KRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,982,275,079
Number of Sequences: 23463169
Number of extensions: 170144882
Number of successful extensions: 686015
Number of sequences better than 100.0: 805
Number of HSP's better than 100.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 315
Number of HSP's that attempted gapping in prelim test: 684145
Number of HSP's gapped (non-prelim): 1907
length of query: 241
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 103
effective length of database: 9,121,278,045
effective search space: 939491638635
effective search space used: 939491638635
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 75 (33.5 bits)