BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042294
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B5X3B2|APMAP_SALSA Adipocyte plasma membrane-associated protein OS=Salmo salar
GN=apmap PE=2 SV=1
Length = 416
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 9 KTGTVELVANLPGFPDNVRINERGQFWVAIDCCRT----AAQEVLSHNPWIRSIYFRL-- 62
K G V NLPGFPDN+R + G +WVA+ R + + LS PWI+ + F+L
Sbjct: 291 KGGMDTFVDNLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQKPWIKKLIFKLFS 350
Query: 63 -PIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVA 121
+ M F+ R Y+++ E+G + DP G+V VSE E G L++G+
Sbjct: 351 QDVLMKFVPR------YSLVIELQESGACMRSFHDPHGMVAAYVSEAHEHDGHLYLGSFR 404
Query: 122 HNHIATL 128
++ L
Sbjct: 405 SPYLCKL 411
>sp|Q3T0E5|APMAP_BOVIN Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP
PE=2 SV=1
Length = 412
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 2 KYWLEGPKTGTVE-LVANLPGFPDNVRINERGQFWVAIDCCRT----AAQEVLSHNPWIR 56
++++ G G + V NLPGFPDN+R + G +WV++ R + + LS P+++
Sbjct: 282 RFYVSGLMKGGADVFVENLPGFPDNIRASSSGGYWVSMAAIRANPGFSMLDFLSERPFLK 341
Query: 57 SIYFRLPIR---MSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQG 113
+ F+L + M F+ R Y+++ +++G L L DP G V+ VSE E G
Sbjct: 342 KVIFKLFSQETVMKFVPR------YSLVLELSDSGTFLRSLHDPEGQVVTYVSEAHEHSG 395
Query: 114 KLWIGTVAHNHIATL 128
L++G+ ++ L
Sbjct: 396 HLYLGSFRAPYLCRL 410
>sp|Q803F5|APMAP_DANRE Adipocyte plasma membrane-associated protein OS=Danio rerio
GN=apmap PE=2 SV=1
Length = 415
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 9 KTGTVELVANLPGFPDNVRINERGQFWVAIDCCRT----AAQEVLSHNPWIRSIYFRLPI 64
K G + NLPGFPDN+R + G +WVA+ R + + LS PW++ + F+L
Sbjct: 290 KGGMDTFIENLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQRPWLKKLIFKLFS 349
Query: 65 RMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNH 124
+ + L V Y+++ +G + DP+G+V SE E G L++G+ +
Sbjct: 350 QDTLLKFV---PRYSLVVELQSDGTCVRSFHDPQGLVSAYSSEAHEYSGHLYLGSFRSPY 406
Query: 125 IATL 128
+ L
Sbjct: 407 LCKL 410
>sp|Q9HDC9|APMAP_HUMAN Adipocyte plasma membrane-associated protein OS=Homo sapiens
GN=APMAP PE=1 SV=2
Length = 416
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 9 KTGTVELVANLPGFPDNVRINERGQFWVAIDCCRT----AAQEVLSHNPWIRSIYFRLPI 64
K G V N+PGFPDN+R + G +WV + R + + LS PWI+ + F+L
Sbjct: 291 KGGADLFVENMPGFPDNIRPSSSGGYWVGMSTIRPNPGFSMLDFLSERPWIKRMIFKLFS 350
Query: 65 R---MSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGT 119
+ M F+ R Y+++ +++G L DP G+V +SEV E G L++G+
Sbjct: 351 QETVMKFVPR------YSLVLELSDSGAFRRSLHDPDGLVATYISEVHEHDGHLYLGS 402
>sp|Q5ZIF1|APMAP_CHICK Adipocyte plasma membrane-associated protein OS=Gallus gallus
GN=APMAP PE=2 SV=1
Length = 415
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 2 KYWLEGPKTGTVEL-VANLPGFPDNVRINERGQFWVAIDCCRT----AAQEVLSHNPWIR 56
+Y++ G G ++ V N+PG PDN+R++ G +WVA+ R + + LS PWI+
Sbjct: 282 RYYVSGLMKGGADMFVENMPGLPDNIRLSSSGGYWVAMPVVRPNPGFSMLDFLSEKPWIK 341
Query: 57 SIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLW 116
+ F+L + + +++ + +++ +E G DP G+ + VSE E G L+
Sbjct: 342 RMIFKL-LSQETVTKLLPKR--SLVVELSETGSYRRSFHDPTGLTVPYVSEAHEHNGYLY 398
Query: 117 IGTVAHNHIATL 128
+G+ I L
Sbjct: 399 LGSFRSPFICRL 410
>sp|Q7TP48|APMAP_RAT Adipocyte plasma membrane-associated protein OS=Rattus norvegicus
GN=Apmap PE=2 SV=2
Length = 376
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 9 KTGTVELVANLPGFPDNVRINERGQFWVAIDCCRT----AAQEVLSHNPWIRSIYFRLPI 64
K G V N+PGFPDN+R + G +WVA R + + LS P+I+ + F+L
Sbjct: 251 KGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIFKLFS 310
Query: 65 R---MSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVA 121
+ M F+ R Y+++ +++G L DP G V+ VSE E G L++G+
Sbjct: 311 QETVMKFVPR------YSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFR 364
Query: 122 HNHIATL 128
I L
Sbjct: 365 SPFICRL 371
>sp|Q9D7N9|APMAP_MOUSE Adipocyte plasma membrane-associated protein OS=Mus musculus
GN=Apmap PE=1 SV=1
Length = 415
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 9 KTGTVELVANLPGFPDNVRINERGQFWVAIDCCRT----AAQEVLSHNPWIRSIYFRLPI 64
K G V N+PGFPDN+R + G +WVA R + + LS P+I+ + F++
Sbjct: 290 KGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIFKMFS 349
Query: 65 R---MSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVA 121
+ M F+ R Y+++ +++G L DP G V+ VSE E G L++G+
Sbjct: 350 QETVMKFVPR------YSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFR 403
Query: 122 HNHIATL 128
I L
Sbjct: 404 SPFICRL 410
>sp|P68174|STSY_RAUMA Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3
SV=1
Length = 342
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 28/130 (21%)
Query: 1 MKYWLEGPKTGTVELVANLPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYF 60
+KYWLEGPK GT E++ +P P N++ N G FWV ++ E L N
Sbjct: 230 VKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWV-------SSSEELDGN-------- 273
Query: 61 RLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTV 120
M G+K F+E G ILEV+ P + +++E G L+IGT+
Sbjct: 274 -----MHGRVDPKGIK-------FDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTL 321
Query: 121 AHNHIATLPY 130
H + L Y
Sbjct: 322 FHGSVGILVY 331
>sp|P68175|STSY_RAUSE Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1
Length = 344
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 28/130 (21%)
Query: 1 MKYWLEGPKTGTVELVANLPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYF 60
+KYWLEGPK GT E++ +P P N++ N G FWV ++ E L N
Sbjct: 232 VKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWV-------SSSEELDGN-------- 275
Query: 61 RLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTV 120
M G+K F+E G ILEV+ P + +++E G L+IGT+
Sbjct: 276 -----MHGRVDPKGIK-------FDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTL 323
Query: 121 AHNHIATLPY 130
H + L Y
Sbjct: 324 FHGSVGILVY 333
>sp|P18417|STSY_CATRO Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2
Length = 352
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 28/130 (21%)
Query: 1 MKYWLEGPKTGTVELVANLPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYF 60
+KYWLEGPK G+ E + +P P N++ N G FWV ++ E L R +
Sbjct: 238 VKYWLEGPKKGSAEFLVTIPN-PGNIKRNSDGHFWV-------SSSEELDGGQHGRVV-- 287
Query: 61 RLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTV 120
G+K F+ G IL+V+ P + +++E G L+IG++
Sbjct: 288 -----------SRGIK-------FDGFGNILQVIPLPPPYEGEHFEQIQEHDGLLYIGSL 329
Query: 121 AHNHIATLPY 130
H+ + L Y
Sbjct: 330 FHSSVGILVY 339
>sp|P94111|STS1_ARATH Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 35/122 (28%)
Query: 2 KYWLEGPKTGTVELVANLPGFPDNV-RINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYF 60
+YW++GPK G+ E N PDN+ RI G FWVA + ++ NP +
Sbjct: 228 RYWIKGPKAGSSEDFTNSVSNPDNIKRIGSTGNFWVA----SVVNKIIVPTNPSAVKV-- 281
Query: 61 RLPIRMSFLARVMGMKMYTVISLFNENGEILEV--LEDPRGVVMKLVSEVKEAQGKLWIG 118
N NGE+L+ L+D G L+SEV E +G L+IG
Sbjct: 282 ------------------------NSNGEVLQTIPLKDKFGDT--LLSEVNEFEGNLYIG 315
Query: 119 TV 120
T+
Sbjct: 316 TL 317
>sp|P92976|STS3_ARATH Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 31/120 (25%)
Query: 2 KYWLEGPKTGTVELVANLPGFPDNV-RINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYF 60
+YW++G K GT E N PDN+ RI G FWVA +A NP
Sbjct: 230 RYWIKGSKAGTSEDFTNSVSNPDNIKRIGSTGNFWVA-SVVNSATGPT---NPSA----- 280
Query: 61 RLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTV 120
+++S +V+ I L ++ G+ LVSEV E +G+L+IG +
Sbjct: 281 ---VKVSSAGKVL-----QTIPLKDKFGDT-------------LVSEVNEYKGQLYIGAL 319
>sp|B3EJ24|RIMM_CHLPB Ribosome maturation factor RimM OS=Chlorobium phaeobacteroides
(strain BS1) GN=rimM PE=3 SV=1
Length = 169
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 35 WVAIDCCRTAAQEVLSHNPWIRS-IYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEV 93
+ ID R A+E++ + ++RS +LP ++L + G+K+ NE E L +
Sbjct: 67 FSGIDT-REKAEEIVGFSVFVRSDALIQLPPDRAYLHELRGLKV------LNERHEELGI 119
Query: 94 LEDPRGVVMKLVSEVKEAQGKLWIGTV 120
+ED G+ V E++ G +++ V
Sbjct: 120 IEDVLGMPAHDVYEIRAEGGLVYVPAV 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,925,557
Number of Sequences: 539616
Number of extensions: 1710649
Number of successful extensions: 4643
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4613
Number of HSP's gapped (non-prelim): 21
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)