Query 042294
Match_columns 131
No_of_seqs 122 out of 545
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 07:54:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042294.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042294hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 99.5 1.3E-13 4.5E-18 105.5 13.1 102 2-131 211-312 (322)
2 3sre_A PON1, serum paraoxonase 99.5 7.1E-14 2.4E-18 111.3 11.1 104 1-130 246-355 (355)
3 3g4e_A Regucalcin; six bladed 98.2 8.2E-06 2.8E-10 61.3 8.9 69 13-122 188-263 (297)
4 3dr2_A Exported gluconolactona 98.2 1.4E-05 4.7E-10 60.1 9.7 83 3-131 220-305 (305)
5 2p4o_A Hypothetical protein; p 97.9 9.7E-05 3.3E-09 55.8 9.6 80 2-121 193-278 (306)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 97.7 0.00018 6.1E-09 53.1 8.3 75 15-130 216-297 (314)
7 3e5z_A Putative gluconolactona 97.4 0.00055 1.9E-08 50.6 8.0 71 14-130 211-284 (296)
8 2ghs_A AGR_C_1268P; regucalcin 97.4 0.0017 5.9E-08 49.3 10.6 68 14-122 220-293 (326)
9 2qe8_A Uncharacterized protein 97.0 0.0016 5.4E-08 49.8 7.0 62 20-121 247-310 (343)
10 2dg1_A DRP35, lactonase; beta 96.7 0.012 4.2E-07 43.6 9.5 68 18-122 228-301 (333)
11 2z2n_A Virginiamycin B lyase; 96.0 0.12 4.2E-06 37.0 11.1 69 21-130 225-293 (299)
12 2qc5_A Streptogramin B lactona 95.8 0.16 5.6E-06 36.3 11.0 70 21-130 188-258 (300)
13 3dr2_A Exported gluconolactona 95.8 0.054 1.9E-06 40.2 8.5 31 10-40 75-105 (305)
14 1rwi_B Serine/threonine-protei 95.8 0.017 5.9E-07 41.3 5.5 71 21-131 192-263 (270)
15 1q7f_A NHL, brain tumor CG1071 95.7 0.085 2.9E-06 38.2 9.3 71 21-130 207-278 (286)
16 2z2n_A Virginiamycin B lyase; 95.7 0.24 8.1E-06 35.4 11.4 70 21-130 183-253 (299)
17 2p4o_A Hypothetical protein; p 95.3 0.12 4.3E-06 38.4 9.1 28 11-38 20-49 (306)
18 2iwa_A Glutamine cyclotransfer 95.2 0.31 1.1E-05 36.7 10.9 82 11-130 7-93 (266)
19 2qc5_A Streptogramin B lactona 95.1 0.45 1.5E-05 33.9 11.3 70 21-130 62-132 (300)
20 1q7f_A NHL, brain tumor CG1071 94.8 0.2 6.9E-06 36.1 8.8 69 22-129 122-191 (286)
21 3g4e_A Regucalcin; six bladed 94.8 0.31 1.1E-05 35.8 9.9 91 8-129 80-177 (297)
22 1pjx_A Dfpase, DIISOPROPYLFLUO 94.7 0.13 4.4E-06 37.4 7.6 31 9-39 54-90 (314)
23 3hrp_A Uncharacterized protein 94.7 0.53 1.8E-05 36.9 11.5 72 22-130 324-408 (409)
24 3v9f_A Two-component system se 94.5 0.16 5.3E-06 42.9 8.5 79 11-129 525-608 (781)
25 4a2l_A BT_4663, two-component 94.2 0.093 3.2E-06 44.3 6.6 74 9-121 570-650 (795)
26 3e5z_A Putative gluconolactona 94.1 0.21 7.3E-06 36.3 7.6 27 13-39 61-87 (296)
27 2p9w_A MAL S 1 allergenic prot 94.1 0.45 1.5E-05 37.3 9.7 92 2-130 104-213 (334)
28 3hxj_A Pyrrolo-quinoline quino 94.0 0.21 7.1E-06 36.6 7.4 41 79-123 275-316 (330)
29 3dsm_A Uncharacterized protein 93.9 1 3.4E-05 33.7 11.2 87 10-129 161-250 (328)
30 1rwi_B Serine/threonine-protei 93.8 0.26 8.8E-06 35.0 7.4 69 22-130 151-220 (270)
31 3fvz_A Peptidyl-glycine alpha- 93.6 0.64 2.2E-05 34.7 9.5 73 22-130 144-225 (329)
32 3v9f_A Two-component system se 93.1 0.62 2.1E-05 39.1 9.7 58 25-120 499-557 (781)
33 4a2l_A BT_4663, two-component 93.0 0.34 1.2E-05 40.8 8.0 47 81-129 564-611 (795)
34 4hw6_A Hypothetical protein, I 92.7 0.49 1.7E-05 37.6 8.1 50 81-130 367-431 (433)
35 3fvz_A Peptidyl-glycine alpha- 92.7 1.2 4E-05 33.2 9.9 71 22-129 92-172 (329)
36 3ott_A Two-component system se 92.4 0.33 1.1E-05 40.7 7.0 18 22-39 518-535 (758)
37 2p9w_A MAL S 1 allergenic prot 91.9 0.73 2.5E-05 36.1 7.9 74 21-131 13-108 (334)
38 2fp8_A Strictosidine synthase; 91.8 1.3 4.5E-05 32.7 9.2 96 10-130 110-214 (322)
39 3zwu_A Alkaline phosphatase PH 91.8 0.66 2.3E-05 39.0 8.1 69 22-118 477-548 (592)
40 3hxj_A Pyrrolo-quinoline quino 91.5 0.9 3.1E-05 33.0 7.8 45 79-128 235-280 (330)
41 1npe_A Nidogen, entactin; glyc 91.0 3.1 0.00011 29.7 10.8 69 21-130 167-236 (267)
42 4hw6_A Hypothetical protein, I 90.8 0.83 2.8E-05 36.3 7.4 70 21-130 228-302 (433)
43 3no2_A Uncharacterized protein 90.7 1.3 4.5E-05 32.6 8.0 47 79-129 146-192 (276)
44 1cru_A Protein (soluble quinop 90.6 1.7 5.8E-05 34.8 9.2 26 12-38 18-44 (454)
45 2dg1_A DRP35, lactonase; beta 90.5 3.1 0.00011 30.3 10.0 32 9-40 74-106 (333)
46 3qqz_A Putative uncharacterize 90.3 2.5 8.4E-05 31.5 9.3 48 79-129 49-97 (255)
47 3a9g_A Putative uncharacterize 90.2 0.87 3E-05 35.1 6.9 26 12-38 20-46 (354)
48 3no2_A Uncharacterized protein 90.1 1.8 6.2E-05 31.8 8.4 43 79-121 186-232 (276)
49 1npe_A Nidogen, entactin; glyc 90.1 3.8 0.00013 29.2 11.5 72 21-130 122-196 (267)
50 2g8s_A Glucose/sorbosone dehyd 90.0 0.59 2E-05 36.0 5.8 31 8-39 5-37 (353)
51 3v64_C Agrin; beta propeller, 89.9 2.7 9.1E-05 32.1 9.5 69 21-129 203-272 (349)
52 4a9v_A PHOX; hydrolase, beta-p 89.6 1.3 4.4E-05 37.3 7.8 70 21-118 476-548 (592)
53 2ism_A Putative oxidoreductase 89.2 3 0.0001 31.8 9.3 29 10-39 20-49 (352)
54 2ghs_A AGR_C_1268P; regucalcin 89.1 5.1 0.00017 29.7 10.4 33 8-40 116-153 (326)
55 3v65_B Low-density lipoprotein 88.9 3.5 0.00012 31.8 9.6 46 81-129 270-315 (386)
56 3das_A Putative oxidoreductase 88.8 2.6 9E-05 32.8 8.8 27 104-130 264-290 (347)
57 2qe8_A Uncharacterized protein 88.7 3.2 0.00011 31.1 9.0 77 22-130 68-152 (343)
58 1ijq_A LDL receptor, low-densi 88.7 6 0.00021 29.4 11.6 48 80-130 144-193 (316)
59 3ott_A Two-component system se 87.9 1.8 6.3E-05 36.1 7.8 47 81-129 495-542 (758)
60 3v64_C Agrin; beta propeller, 87.9 7.3 0.00025 29.5 11.5 78 12-130 106-189 (349)
61 3m0c_C LDL receptor, low-densi 87.9 4.3 0.00015 35.0 10.2 48 81-129 582-629 (791)
62 1ijq_A LDL receptor, low-densi 87.9 6.1 0.00021 29.4 10.1 48 81-129 188-235 (316)
63 3v65_B Low-density lipoprotein 87.3 8.6 0.00029 29.6 11.2 79 11-130 148-232 (386)
64 3sov_A LRP-6, low-density lipo 87.2 6.9 0.00024 29.5 10.1 48 80-130 146-195 (318)
65 2ism_A Putative oxidoreductase 86.9 5.4 0.00018 30.4 9.4 27 104-130 269-295 (352)
66 3das_A Putative oxidoreductase 86.5 4.7 0.00016 31.4 8.9 27 12-39 23-50 (347)
67 3p5b_L Low density lipoprotein 85.7 11 0.00037 29.3 11.6 47 81-130 227-275 (400)
68 3tc9_A Hypothetical hydrolase; 85.6 4.2 0.00014 32.0 8.4 50 81-130 364-428 (430)
69 3p5b_L Low density lipoprotein 85.0 7.7 0.00026 30.1 9.6 48 81-129 270-317 (400)
70 3mbr_X Glutamine cyclotransfer 84.5 10 0.00035 28.0 10.7 85 7-130 3-92 (243)
71 3dsm_A Uncharacterized protein 84.3 11 0.00036 28.0 11.4 73 21-130 84-159 (328)
72 3nol_A Glutamine cyclotransfer 84.0 12 0.0004 28.2 10.9 49 79-130 65-114 (262)
73 3m0c_C LDL receptor, low-densi 83.1 16 0.00055 31.5 11.4 47 81-130 539-587 (791)
74 3vgz_A Uncharacterized protein 83.0 11 0.00037 27.1 13.1 50 81-130 208-260 (353)
75 3vgz_A Uncharacterized protein 82.9 11 0.00038 27.1 11.4 85 9-130 77-171 (353)
76 1cru_A Protein (soluble quinop 82.8 3.3 0.00011 33.1 6.7 30 11-40 129-163 (454)
77 1n7d_A LDL receptor, low-densi 81.1 8.8 0.0003 32.3 9.0 71 21-129 540-611 (699)
78 3tc9_A Hypothetical hydrolase; 80.7 5.3 0.00018 31.4 7.1 71 18-129 224-298 (430)
79 4a0p_A LRP6, LRP-6, low-densit 79.1 15 0.00051 30.6 9.6 76 12-129 157-234 (628)
80 3nok_A Glutaminyl cyclase; bet 78.3 19 0.00066 27.1 11.5 52 79-130 155-208 (268)
81 3sov_A LRP-6, low-density lipo 78.3 19 0.00065 27.0 10.2 47 81-130 190-236 (318)
82 3nol_A Glutamine cyclotransfer 77.8 20 0.00067 26.9 11.3 51 80-130 147-199 (262)
83 3c75_H MADH, methylamine dehyd 76.7 22 0.00074 28.3 9.6 83 18-130 116-207 (426)
84 3qqz_A Putative uncharacterize 76.5 11 0.00036 28.0 7.3 51 78-129 194-250 (255)
85 3a9g_A Putative uncharacterize 75.1 21 0.00074 27.1 9.0 29 13-42 189-219 (354)
86 3hfq_A Uncharacterized protein 74.1 22 0.00076 25.7 10.0 17 23-39 242-259 (347)
87 4a0p_A LRP6, LRP-6, low-densit 73.7 30 0.001 28.7 10.0 46 81-129 501-546 (628)
88 3s94_A LRP-6, low-density lipo 71.0 23 0.00077 29.4 8.7 48 80-130 502-549 (619)
89 1jof_A Carboxy-CIS,CIS-muconat 69.8 31 0.0011 25.5 9.5 49 79-130 121-174 (365)
90 2iwa_A Glutamine cyclotransfer 68.6 33 0.0011 25.4 8.9 52 79-130 126-179 (266)
91 1n7d_A LDL receptor, low-densi 66.6 11 0.00038 31.7 6.0 18 21-38 496-514 (699)
92 3it8_D 2L protein; MHC class I 65.4 4.2 0.00014 31.7 2.9 24 18-41 246-272 (324)
93 3mbr_X Glutamine cyclotransfer 64.6 39 0.0013 24.8 11.9 50 81-130 126-177 (243)
94 3kya_A Putative phosphatase; s 64.5 40 0.0014 27.5 8.7 51 80-130 402-473 (496)
95 3hrp_A Uncharacterized protein 64.2 47 0.0016 25.5 12.0 51 80-130 290-352 (409)
96 3s94_A LRP-6, low-density lipo 62.8 64 0.0022 26.6 11.5 79 12-130 382-465 (619)
97 1jmx_B Amine dehydrogenase; ox 62.1 39 0.0013 23.9 9.7 29 10-38 30-61 (349)
98 3sjl_D Methylamine dehydrogena 59.5 62 0.0021 25.3 10.5 53 78-130 108-167 (386)
99 1mda_H Methylamine dehydrogena 50.4 84 0.0029 24.1 9.5 80 18-127 63-151 (368)
100 3nok_A Glutaminyl cyclase; bet 50.2 34 0.0012 25.7 5.6 46 81-130 77-123 (268)
101 3u4y_A Uncharacterized protein 49.7 66 0.0023 22.7 11.6 20 18-37 218-238 (331)
102 1ri6_A Putative isomerase YBHE 44.2 80 0.0027 22.1 10.9 31 8-38 69-102 (343)
103 2oiz_A Aromatic amine dehydrog 43.1 1E+02 0.0034 23.0 9.5 53 78-130 80-138 (361)
104 2jrb_A ORF 1 protein; RNA bind 42.6 24 0.00083 22.2 3.2 39 21-61 44-82 (88)
105 3u4y_A Uncharacterized protein 42.2 88 0.003 22.0 10.5 30 10-39 117-147 (331)
106 3hfq_A Uncharacterized protein 41.4 95 0.0033 22.2 9.3 32 8-39 25-58 (347)
107 3scy_A Hypothetical bacterial 39.8 1E+02 0.0036 22.2 9.9 44 80-128 285-333 (361)
108 2g8s_A Glucose/sorbosone dehyd 39.2 14 0.00049 28.0 2.0 26 14-39 315-341 (353)
109 1flg_A Protein (quinoprotein e 39.0 89 0.0031 25.4 6.9 43 78-122 506-549 (582)
110 3f62_A Interleukin 18 binding 38.7 18 0.00063 23.6 2.2 24 3-29 36-61 (109)
111 3bws_A Protein LP49; two-domai 33.2 1.4E+02 0.0049 21.8 8.6 20 19-38 121-140 (433)
112 3q7m_A Lipoprotein YFGL, BAMB; 32.7 96 0.0033 22.7 5.7 43 78-123 327-370 (376)
113 3scy_A Hypothetical bacterial 32.5 1.4E+02 0.0047 21.5 13.6 90 8-130 36-127 (361)
114 3q7m_A Lipoprotein YFGL, BAMB; 31.7 1.5E+02 0.005 21.6 6.7 50 79-129 63-119 (376)
115 2nnc_A Sulfur covalently-bindi 30.6 1.2E+02 0.004 20.0 5.9 44 76-120 70-113 (124)
116 3sre_A PON1, serum paraoxonase 30.3 1.8E+02 0.0063 22.2 9.8 43 78-120 140-183 (355)
117 3kya_A Putative phosphatase; s 28.3 2.4E+02 0.0081 22.8 7.7 43 80-122 163-214 (496)
118 2ad6_A Methanol dehydrogenase 27.7 1.1E+02 0.0037 24.8 5.6 42 79-122 485-527 (571)
119 2xet_A CAF1A usher, F1 capsule 27.4 84 0.0029 19.0 3.9 14 110-123 35-48 (89)
120 2ojh_A Uncharacterized protein 26.9 1.5E+02 0.005 19.9 8.4 34 3-36 155-188 (297)
121 2mad_H Methylamine dehydrogena 25.9 2.1E+02 0.0072 21.5 9.3 69 23-131 266-349 (373)
122 3q6k_A 43.2 kDa salivary prote 25.5 2.4E+02 0.0082 22.0 8.7 70 10-119 262-341 (381)
123 1pby_B Quinohemoprotein amine 25.2 1.7E+02 0.0059 20.2 9.3 29 10-38 20-52 (337)
124 3soo_A LINE-1 type transposase 25.1 53 0.0018 20.6 2.6 39 21-61 44-82 (88)
125 1w6s_A Methanol dehydrogenase 24.7 1.3E+02 0.0045 24.7 5.6 43 78-122 493-536 (599)
126 3dmc_A NTF2-like protein; stru 24.4 97 0.0033 19.8 4.0 6 87-92 117-122 (134)
127 3l48_A Outer membrane usher pr 23.9 1.1E+02 0.0038 18.9 4.0 20 106-125 36-55 (94)
128 1kb0_A Quinohemoprotein alcoho 23.4 2E+02 0.0068 23.8 6.5 40 78-119 497-537 (677)
129 2i46_A Adrenocortical dysplasi 22.8 59 0.002 22.3 2.6 11 52-62 7-17 (161)
130 2oxg_Y SOXY protein; immunoglo 21.4 1.8E+02 0.0063 19.1 5.5 44 76-120 68-113 (124)
131 1zps_A PRA-CH, phosphoribosyl- 20.9 50 0.0017 22.5 1.9 17 2-18 65-81 (138)
132 1yiq_A Quinohemoprotein alcoho 20.8 1.7E+02 0.0058 24.2 5.6 41 78-120 495-536 (689)
133 3s25_A Hypothetical 7-bladed b 20.7 2.6E+02 0.0088 20.6 6.2 25 106-130 267-291 (302)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.53 E-value=1.3e-13 Score=105.51 Aligned_cols=102 Identities=35% Similarity=0.621 Sum_probs=88.3
Q ss_pred eeeeeCCCCCceeEeeeCCcCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEE
Q 042294 2 KYWLEGPKTGTVELVANLPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVI 81 (131)
Q Consensus 2 rywl~G~k~G~~e~f~~LPG~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v 81 (131)
+||++|.+.|+.++|.++|| ||||..|++|++|||....|+.. |. ....+.|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~-----------------~~----------~~~~~~v 262 (322)
T 2fp8_A 211 KYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN-----------------MH----------GRVDPKG 262 (322)
T ss_dssp EEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS-----------------TT----------SCEEEEE
T ss_pred EEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc-----------------cc----------CCCccEE
Confidence 78999998999999988999 99999999999999998866642 11 1235779
Q ss_pred EEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEeeCC
Q 042294 82 SLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPYP 131 (131)
Q Consensus 82 ~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l~ 131 (131)
.++|++|++++.+++++|..+..+|++.+.+++||+++..+++|.++++.
T Consensus 263 ~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 263 IKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred EEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 99999999999999998876788999999999999999999999999863
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.52 E-value=7.1e-14 Score=111.31 Aligned_cols=104 Identities=19% Similarity=0.265 Sum_probs=78.0
Q ss_pred CeeeeeCC-CCCceeEeeeCCcCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcce
Q 042294 1 MKYWLEGP-KTGTVELVANLPGFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMY 78 (131)
Q Consensus 1 ~rywl~G~-k~G~~e~f~~LPG~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~ 78 (131)
++|++++. +.+..++| ++||+||||+.|+ +|++|||....-. +++.-=|+ ..+.
T Consensus 246 ~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~-------------~v~~~~P~----------~~~~ 301 (355)
T 3sre_A 246 HVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGM-------------RIFFYDAE----------NPPG 301 (355)
T ss_dssp EEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHH-------------HHHSCCTT----------SCCC
T ss_pred EEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCce-------------EEEEECCC----------CCCC
Confidence 37888753 34455667 8899999999999 5999998753211 11111111 1234
Q ss_pred EEEEEEc----CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 79 TVISLFN----ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 79 ~~v~~v~----~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
..|.++. +++++.+.|+| +|+.++.+|+|.+++|+|||||++.+ +..|+|
T Consensus 302 s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 302 SEVLRIQDILSEEPKVTVVYAE-NGTVLQGSTVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp EEEEEEECTTSSSCEEEEEEEE-CSSSCCSEEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred CEEEEEEccCCCCcEEEEEEEc-CCCEEEeeEEEEEECCEEEEEEcCCC-ceeccC
Confidence 6688887 68999999999 89999999999999999999999999 666765
No 3
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.18 E-value=8.2e-06 Score=61.30 Aligned_cols=69 Identities=17% Similarity=0.286 Sum_probs=55.0
Q ss_pred eeEeeeC---CcCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCC-C
Q 042294 13 VELVANL---PGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNEN-G 88 (131)
Q Consensus 13 ~e~f~~L---PG~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~-G 88 (131)
.++|..+ +|.||+|..|++|++|||.... +.|.++|++ |
T Consensus 188 ~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-------------------------------------~~v~~~d~~tG 230 (297)
T 3g4e_A 188 RRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-------------------------------------GRVIRLDPVTG 230 (297)
T ss_dssp EEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-------------------------------------TEEEEECTTTC
T ss_pred cEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-------------------------------------CEEEEEcCCCc
Confidence 3566644 4799999999999999998742 338899986 9
Q ss_pred eEEEEEECCCCCcccceEEEEEeC---CEEEEecCCC
Q 042294 89 EILEVLEDPRGVVMKLVSEVKEAQ---GKLWIGTVAH 122 (131)
Q Consensus 89 ~i~~~l~d~~g~~~~~is~v~~~~---g~LylGS~~~ 122 (131)
+++..+..|. ..+|++.+.+ ++||+++-..
T Consensus 231 ~~~~~i~~p~----~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 231 KRLQTVKLPV----DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CEEEEEECSS----SBEEEEEEESGGGCEEEEEEBCT
T ss_pred eEEEEEECCC----CCceEEEEeCCCCCEEEEEcCCc
Confidence 9999999874 4688998864 6999998653
No 4
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.16 E-value=1.4e-05 Score=60.15 Aligned_cols=83 Identities=22% Similarity=0.385 Sum_probs=60.6
Q ss_pred eeeeCCCCCceeEee-eCCcCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEE
Q 042294 3 YWLEGPKTGTVELVA-NLPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVI 81 (131)
Q Consensus 3 ywl~G~k~G~~e~f~-~LPG~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v 81 (131)
|-+++...++.++|. ..+|.||+|..|++|++||+... + |
T Consensus 220 ~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~--------------------------------------g-v 260 (305)
T 3dr2_A 220 FAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT--------------------------------------G-V 260 (305)
T ss_dssp EEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS--------------------------------------E-E
T ss_pred EEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC--------------------------------------c-E
Confidence 334433334455666 35799999999999999997521 3 8
Q ss_pred EEEcCCCeEEEEEECCCCCcccceEEEEE--eCCEEEEecCCCCeEEEeeCC
Q 042294 82 SLFNENGEILEVLEDPRGVVMKLVSEVKE--AQGKLWIGTVAHNHIATLPYP 131 (131)
Q Consensus 82 ~~v~~~G~i~~~l~d~~g~~~~~is~v~~--~~g~LylGS~~~~~i~~~~l~ 131 (131)
.++|++|+.+..+..+. .++++++ .+++||+++- ..|.++++|
T Consensus 261 ~~~~~~g~~~~~~~~~~-----~~~~~~f~~d~~~L~it~~--~~l~~~~~~ 305 (305)
T 3dr2_A 261 CVFDSDGQLLGHIPTPG-----TASNCTFDQAQQRLFITGG--PCLWMLPLP 305 (305)
T ss_dssp EEECTTSCEEEEEECSS-----CCCEEEECTTSCEEEEEET--TEEEEEECC
T ss_pred EEECCCCCEEEEEECCC-----ceeEEEEeCCCCEEEEEcC--CeEEEEECC
Confidence 88999999999998875 2566666 4578999986 477777765
No 5
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.87 E-value=9.7e-05 Score=55.75 Aligned_cols=80 Identities=11% Similarity=0.140 Sum_probs=56.5
Q ss_pred eeeeeC-CCCCceeEeeeCCcCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEE
Q 042294 2 KYWLEG-PKTGTVELVANLPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTV 80 (131)
Q Consensus 2 rywl~G-~k~G~~e~f~~LPG~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~ 80 (131)
+|.+++ .+.+..++|..+ +.||+|..|++|++|||.... +.
T Consensus 193 ~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~~~-------------------------------------~~ 234 (306)
T 2p4o_A 193 RIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATHIY-------------------------------------NS 234 (306)
T ss_dssp EEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECBTT-------------------------------------CC
T ss_pred EEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeCCC-------------------------------------Ce
Confidence 566665 344667777765 579999999999999997642 23
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEe-----CCEEEEecCC
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEA-----QGKLWIGTVA 121 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~-----~g~LylGS~~ 121 (131)
|.++|++|++.....-+.+ +...+++... +++||+.+..
T Consensus 235 V~~~~~~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 235 VVRIAPDRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEEECTTCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEEECCCCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCC
Confidence 7888999988553222222 3567888875 3799998764
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.69 E-value=0.00018 Score=53.10 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=57.6
Q ss_pred EeeeCC----cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCC-Ce
Q 042294 15 LVANLP----GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNEN-GE 89 (131)
Q Consensus 15 ~f~~LP----G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~-G~ 89 (131)
.+..++ +.|++|..|++|++||+.... +.+.++|.+ |+
T Consensus 216 ~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~-------------------------------------~~i~~~d~~~g~ 258 (314)
T 1pjx_A 216 VWGHIPGTHEGGADGMDFDEDNNLLVANWGS-------------------------------------SHIEVFGPDGGQ 258 (314)
T ss_dssp EEEECCCCSSCEEEEEEEBTTCCEEEEEETT-------------------------------------TEEEEECTTCBS
T ss_pred EEEECCCCCCCCCCceEECCCCCEEEEEcCC-------------------------------------CEEEEEcCCCCc
Confidence 455565 779999999999999987642 237788887 99
Q ss_pred EEEEEECCCCCcccceEEEEEe-CC-EEEEecCCCCeEEEeeC
Q 042294 90 ILEVLEDPRGVVMKLVSEVKEA-QG-KLWIGTVAHNHIATLPY 130 (131)
Q Consensus 90 i~~~l~d~~g~~~~~is~v~~~-~g-~LylGS~~~~~i~~~~l 130 (131)
.+..+..+. ..++++.+. +| +||+++-.+..|.++++
T Consensus 259 ~~~~~~~~~----~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 259 PKMRIRCPF----EKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CSEEEECSS----SCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred EeEEEeCCC----CCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 888887664 357777773 34 59999988888988875
No 7
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.44 E-value=0.00055 Score=50.57 Aligned_cols=71 Identities=15% Similarity=0.299 Sum_probs=53.6
Q ss_pred eEeeeCCcCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEE
Q 042294 14 ELVANLPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEV 93 (131)
Q Consensus 14 e~f~~LPG~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~ 93 (131)
++|...++.||+|..|++|++||+. . +.|.++|++|+.+..
T Consensus 211 ~~~~~~~~~p~~i~~d~~G~l~v~~-~--------------------------------------~~v~~~~~~g~~~~~ 251 (296)
T 3e5z_A 211 VHFTVEPGKTDGLRVDAGGLIWASA-G--------------------------------------DGVHVLTPDGDELGR 251 (296)
T ss_dssp EEECCSSSCCCSEEEBTTSCEEEEE-T--------------------------------------TEEEEECTTSCEEEE
T ss_pred eEeeCCCCCCCeEEECCCCCEEEEc-C--------------------------------------CeEEEECCCCCEEEE
Confidence 3442246899999999999999987 2 127788999999999
Q ss_pred EECCCCCcccceEEEEEe---CCEEEEecCCCCeEEEeeC
Q 042294 94 LEDPRGVVMKLVSEVKEA---QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 94 l~d~~g~~~~~is~v~~~---~g~LylGS~~~~~i~~~~l 130 (131)
+..+.+ ++++.+. +++||+++- ..+.++++
T Consensus 252 ~~~~~~-----~~~~~f~~~d~~~L~v~t~--~~l~~~~~ 284 (296)
T 3e5z_A 252 VLTPQT-----TSNLCFGGPEGRTLYMTVS--TEFWSIET 284 (296)
T ss_dssp EECSSC-----CCEEEEESTTSCEEEEEET--TEEEEEEC
T ss_pred EECCCC-----ceeEEEECCCCCEEEEEcC--CeEEEEEc
Confidence 998763 5677663 258999985 46777664
No 8
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.40 E-value=0.0017 Score=49.30 Aligned_cols=68 Identities=16% Similarity=0.239 Sum_probs=52.9
Q ss_pred eEeee---CCcCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeE
Q 042294 14 ELVAN---LPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEI 90 (131)
Q Consensus 14 e~f~~---LPG~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i 90 (131)
++|.. ..+.||+|..|++|++||+.... +.|.++|.+|+.
T Consensus 220 ~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~-------------------------------------~~v~~~d~~g~~ 262 (326)
T 2ghs_A 220 EVFIDSTGIKGGMDGSVCDAEGHIWNARWGE-------------------------------------GAVDRYDTDGNH 262 (326)
T ss_dssp EEEEECTTSSSEEEEEEECTTSCEEEEEETT-------------------------------------TEEEEECTTCCE
T ss_pred eEEEECCCCCCCCCeeEECCCCCEEEEEeCC-------------------------------------CEEEEECCCCCE
Confidence 45654 35889999999999999987632 237888999999
Q ss_pred EEEEECCCCCcccceEEEEEe---CCEEEEecCCC
Q 042294 91 LEVLEDPRGVVMKLVSEVKEA---QGKLWIGTVAH 122 (131)
Q Consensus 91 ~~~l~d~~g~~~~~is~v~~~---~g~LylGS~~~ 122 (131)
++.+..+. ..++++.+. +++||+++...
T Consensus 263 ~~~i~~~~----~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 263 IARYEVPG----KQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEECSC----SBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEEECCC----CCcEEEEEecCCCCEEEEEecCC
Confidence 99998764 357888875 26899998765
No 9
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.05 E-value=0.0016 Score=49.75 Aligned_cols=62 Identities=11% Similarity=0.207 Sum_probs=48.5
Q ss_pred CcCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcC-CCeEEEEEECCC
Q 042294 20 PGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNE-NGEILEVLEDPR 98 (131)
Q Consensus 20 PG~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~-~G~i~~~l~d~~ 98 (131)
.|.||+|..|++|++|++.... +.|.++|. +|++....+++.
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~-------------------------------------~~V~~~d~~~G~~~~~~~~~~ 289 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAH-------------------------------------SAIGVITSADRAYKLLVTDEK 289 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGG-------------------------------------TEEEEEETTTTEEEEEEECGG
T ss_pred CCCCceEEECCCCCEEEEccCC-------------------------------------CeEEEEECCCCCEEEEEECCc
Confidence 3589999999999999997642 33888898 899877777652
Q ss_pred CCcccceEEEEEe-CCEEEEecCC
Q 042294 99 GVVMKLVSEVKEA-QGKLWIGTVA 121 (131)
Q Consensus 99 g~~~~~is~v~~~-~g~LylGS~~ 121 (131)
+...+++... +|+||+.+-.
T Consensus 290 ---~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 290 ---LSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp ---GSCEEEEEECTTSCEEEEECC
T ss_pred ---eecCCeeEECCCCcEEEEeCc
Confidence 4678888884 6899998753
No 10
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.72 E-value=0.012 Score=43.63 Aligned_cols=68 Identities=19% Similarity=0.180 Sum_probs=48.8
Q ss_pred eCCc--CCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEE
Q 042294 18 NLPG--FPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLE 95 (131)
Q Consensus 18 ~LPG--~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~ 95 (131)
.+++ .|++|..|++|++||+.... +.|.++|.+|+.+..+.
T Consensus 228 ~~~~~~~~~~i~~d~~G~l~v~~~~~-------------------------------------~~v~~~d~~g~~~~~~~ 270 (333)
T 2dg1_A 228 YFTGHEGPDSCCIDSDDNLYVAMYGQ-------------------------------------GRVLVFNKRGYPIGQIL 270 (333)
T ss_dssp ECCSSSEEEEEEEBTTCCEEEEEETT-------------------------------------TEEEEECTTSCEEEEEE
T ss_pred ecCCCCCCCceEECCCCCEEEEEcCC-------------------------------------CEEEEECCCCCEEEEEE
Confidence 4454 89999999999999987531 23777899999999887
Q ss_pred CCCC--CcccceEEEEEe--CCEEEEecCCC
Q 042294 96 DPRG--VVMKLVSEVKEA--QGKLWIGTVAH 122 (131)
Q Consensus 96 d~~g--~~~~~is~v~~~--~g~LylGS~~~ 122 (131)
.+.. ..+..++++... +++||+++-..
T Consensus 271 ~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 271 IPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp CTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred cCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 6542 012246777763 36999998763
No 11
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.00 E-value=0.12 Score=37.00 Aligned_cols=69 Identities=12% Similarity=0.101 Sum_probs=48.6
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCCC
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGV 100 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g~ 100 (131)
..|..|..|++|++||+.... +.+.++|.+|++. .+.-+.+.
T Consensus 225 ~~~~~i~~~~~g~l~v~~~~~-------------------------------------~~i~~~d~~g~~~-~~~~~~~~ 266 (299)
T 2z2n_A 225 ARPHAITAGAGIDLWFTEWGA-------------------------------------NKIGRLTSNNIIE-EYPIQIKS 266 (299)
T ss_dssp CCEEEEEECSTTCEEEEETTT-------------------------------------TEEEEEETTTEEE-EEECSSSS
T ss_pred CCceeEEECCCCCEEEeccCC-------------------------------------ceEEEECCCCceE-EEeCCCCC
Confidence 578899999999999986431 2277778888754 44433322
Q ss_pred cccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 101 VMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 101 ~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
..+.++.+.+|+||+++. ...|.+++.
T Consensus 267 --~~~~~i~~~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 267 --AEPHGICFDGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp --CCEEEEEECSSCEEEEET-TTEEEEEEE
T ss_pred --CccceEEecCCCEEEEec-CCcEEEEEc
Confidence 356776667799999975 678887753
No 12
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.78 E-value=0.16 Score=36.30 Aligned_cols=70 Identities=17% Similarity=0.311 Sum_probs=49.3
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCCC
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGV 100 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g~ 100 (131)
..|..|..|++|++|++-... +.+.++|.+|++... .-+.+
T Consensus 188 ~~~~~i~~d~~g~l~v~~~~~-------------------------------------~~i~~~~~~g~~~~~-~~~~~- 228 (300)
T 2qc5_A 188 AAPVGITSGNDGALWFVEIMG-------------------------------------NKIGRITTTGEISEY-DIPTP- 228 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTT-------------------------------------TEEEEECTTCCEEEE-ECSST-
T ss_pred CCcceEEECCCCCEEEEccCC-------------------------------------CEEEEEcCCCcEEEE-ECCCC-
Confidence 368999999999999986531 236777878876654 22322
Q ss_pred cccceEEEEEe-CCEEEEecCCCCeEEEeeC
Q 042294 101 VMKLVSEVKEA-QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 101 ~~~~is~v~~~-~g~LylGS~~~~~i~~~~l 130 (131)
...++++... +|+||+++..+..|.+++.
T Consensus 229 -~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 229 -NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp -TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred -CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 2456777774 6889999988888887753
No 13
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.77 E-value=0.054 Score=40.16 Aligned_cols=31 Identities=13% Similarity=0.292 Sum_probs=24.8
Q ss_pred CCceeEeeeCCcCCCceeecCCCCEEEEeec
Q 042294 10 TGTVELVANLPGFPDNVRINERGQFWVAIDC 40 (131)
Q Consensus 10 ~G~~e~f~~LPG~PDNI~~~~~G~~Wval~~ 40 (131)
.|+.++|..-.+.|..+..|++|++|++-..
T Consensus 75 ~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~ 105 (305)
T 3dr2_A 75 DGTVDVLLDATAFTNGNAVDAQQRLVHCEHG 105 (305)
T ss_dssp TSCEEEEEESCSCEEEEEECTTSCEEEEETT
T ss_pred CCCEEEEeCCCCccceeeECCCCCEEEEECC
Confidence 4666777766788999999999999998653
No 14
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.76 E-value=0.017 Score=41.33 Aligned_cols=71 Identities=13% Similarity=0.189 Sum_probs=51.8
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCCC
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGV 100 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g~ 100 (131)
..|.+|..|++|.+||+-... +.+.++|.+|+........ +
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~-------------------------------------~~v~~~~~~~~~~~~~~~~-~- 232 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNT-------------------------------------NQVVKLLAGSTTSTVLPFT-G- 232 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTT-------------------------------------SCEEEECTTCSCCEECCCC-S-
T ss_pred CCceEEEECCCCCEEEEECCC-------------------------------------CcEEEEcCCCCcceeeccC-C-
Confidence 579999999999999986532 2266778777765543321 2
Q ss_pred cccceEEEEEe-CCEEEEecCCCCeEEEeeCC
Q 042294 101 VMKLVSEVKEA-QGKLWIGTVAHNHIATLPYP 131 (131)
Q Consensus 101 ~~~~is~v~~~-~g~LylGS~~~~~i~~~~l~ 131 (131)
+..++++... +|+||++...+..|.+++++
T Consensus 233 -~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 233 -LNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp -CSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred -CCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 3467788774 68899999999999988764
No 15
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.74 E-value=0.085 Score=38.18 Aligned_cols=71 Identities=18% Similarity=0.346 Sum_probs=51.0
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCCC
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGV 100 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g~ 100 (131)
..|..|..|++|++||+-... ...|..+|.+|+.+..+....+.
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~------------------------------------~~~i~~~~~~g~~~~~~~~~~~~ 250 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHN------------------------------------NFNLTIFTQDGQLISALESKVKH 250 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSS------------------------------------SCEEEEECTTSCEEEEEEESSCC
T ss_pred CCCcEEEECCCCCEEEEeCCC------------------------------------CEEEEEECCCCCEEEEEcccCCC
Confidence 479999999999999986532 11377788999999888754322
Q ss_pred cccceEEEEE-eCCEEEEecCCCCeEEEeeC
Q 042294 101 VMKLVSEVKE-AQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 101 ~~~~is~v~~-~~g~LylGS~~~~~i~~~~l 130 (131)
..+.++.. .+|+||+++. .+.|.++++
T Consensus 251 --~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 251 --AQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp --SCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred --CcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 34556666 4789999974 677776654
No 16
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.66 E-value=0.24 Score=35.43 Aligned_cols=70 Identities=19% Similarity=0.248 Sum_probs=48.4
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCCC
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGV 100 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g~ 100 (131)
..|..|..|++|.+|++-... +.+.++|.+|++.. +..+.+
T Consensus 183 ~~~~~i~~~~~g~l~v~~~~~-------------------------------------~~i~~~~~~g~~~~-~~~~~~- 223 (299)
T 2z2n_A 183 SGPVGITKGNDDALWFVEIIG-------------------------------------NKIGRITTSGEITE-FKIPTP- 223 (299)
T ss_dssp CCEEEEEECTTSSEEEEETTT-------------------------------------TEEEEECTTCCEEE-EECSST-
T ss_pred CcceeEEECCCCCEEEEccCC-------------------------------------ceEEEECCCCcEEE-EECCCC-
Confidence 358889999999999985421 22667777777554 433322
Q ss_pred cccceEEEEEe-CCEEEEecCCCCeEEEeeC
Q 042294 101 VMKLVSEVKEA-QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 101 ~~~~is~v~~~-~g~LylGS~~~~~i~~~~l 130 (131)
...+.++.+. +|+||+++.....|.+++.
T Consensus 224 -~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 224 -NARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp -TCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred -CCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 2456777774 6789999888888887763
No 17
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.30 E-value=0.12 Score=38.38 Aligned_cols=28 Identities=18% Similarity=0.474 Sum_probs=21.6
Q ss_pred CceeEeeeCC--cCCCceeecCCCCEEEEe
Q 042294 11 GTVELVANLP--GFPDNVRINERGQFWVAI 38 (131)
Q Consensus 11 G~~e~f~~LP--G~PDNI~~~~~G~~Wval 38 (131)
.+.+++..+| .+|.++..|++|++|++-
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~~g~lyv~d 49 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAPDGTIFVTN 49 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECTTSCEEEEE
T ss_pred CCceEeEeCCCCCCcceEEECCCCCEEEEe
Confidence 3445555555 799999999999999874
No 18
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.15 E-value=0.31 Score=36.75 Aligned_cols=82 Identities=10% Similarity=0.047 Sum_probs=59.4
Q ss_pred CceeEee--eCC--cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEc-
Q 042294 11 GTVELVA--NLP--GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFN- 85 (131)
Q Consensus 11 G~~e~f~--~LP--G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~- 85 (131)
-+.++.. .++ .||-++..+++|.+|++-... ..+.|..+|
T Consensus 7 ~~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~-----------------------------------~~s~v~~iD~ 51 (266)
T 2iwa_A 7 YIVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLY-----------------------------------GRSSVRQVAL 51 (266)
T ss_dssp EEEEEEEEEECCTTCCEEEEEECSTTEEEEEECST-----------------------------------TTCEEEEEET
T ss_pred cCceEEEEEECCCCCCcccEEEeCCCeEEEECCCC-----------------------------------CCCEEEEEEC
Confidence 3456665 344 367899999989999975421 114477888
Q ss_pred CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 86 ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 86 ~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
..|++++.+.-+.+ ....++...+++||..+..++-+.+++.
T Consensus 52 ~tg~v~~~i~l~~~---~fgeGi~~~g~~lyv~t~~~~~v~viD~ 93 (266)
T 2iwa_A 52 QTGKVENIHKMDDS---YFGEGLTLLNEKLYQVVWLKNIGFIYDR 93 (266)
T ss_dssp TTCCEEEEEECCTT---CCEEEEEEETTEEEEEETTCSEEEEEET
T ss_pred CCCCEEEEEecCCC---cceEEEEEeCCEEEEEEecCCEEEEEEC
Confidence 46999999875432 3445677789999999999999998875
No 19
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.10 E-value=0.45 Score=33.94 Aligned_cols=70 Identities=14% Similarity=0.267 Sum_probs=47.9
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCCC
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGV 100 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g~ 100 (131)
..|-.|..|++|.+|++.... +.+.++|.+|++. .+..+...
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~-------------------------------------~~v~~~d~~g~~~-~~~~~~~~ 103 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGA-------------------------------------NKIGKLSKKGGFT-EYPLPQPD 103 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTT-------------------------------------TEEEEECTTSCEE-EEECSSTT
T ss_pred CcceeEEECCCCCEEEEecCC-------------------------------------CeEEEECCCCCeE-EecCCCCC
Confidence 568889999999999975421 2377788778764 44433222
Q ss_pred cccceEEEEEe-CCEEEEecCCCCeEEEeeC
Q 042294 101 VMKLVSEVKEA-QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 101 ~~~~is~v~~~-~g~LylGS~~~~~i~~~~l 130 (131)
..+.++... +|+||++...+..|.+++.
T Consensus 104 --~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 104 --SGPYGITEGLNGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp --CCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred --CCCccceECCCCCEEEEccCCCeEEEECC
Confidence 356677664 6889999887777877653
No 20
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.79 E-value=0.2 Score=36.12 Aligned_cols=69 Identities=14% Similarity=0.327 Sum_probs=48.0
Q ss_pred CCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCCCc
Q 042294 22 FPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVV 101 (131)
Q Consensus 22 ~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g~~ 101 (131)
.|-.|..|++|++||+-... +.+..+|.+|+.+..+.....
T Consensus 122 ~~~~i~~~~~g~l~v~~~~~-------------------------------------~~i~~~~~~g~~~~~~~~~~~-- 162 (286)
T 1q7f_A 122 HPRGVTVDNKGRIIVVECKV-------------------------------------MRVIIFDQNGNVLHKFGCSKH-- 162 (286)
T ss_dssp CEEEEEECTTSCEEEEETTT-------------------------------------TEEEEECTTSCEEEEEECTTT--
T ss_pred CceEEEEeCCCCEEEEECCC-------------------------------------CEEEEEcCCCCEEEEeCCCCc--
Confidence 57788888889988874321 236777888888887764321
Q ss_pred ccceEEEEEe-CCEEEEecCCCCeEEEee
Q 042294 102 MKLVSEVKEA-QGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 102 ~~~is~v~~~-~g~LylGS~~~~~i~~~~ 129 (131)
...+.++... +|+||++...+..|.+++
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFN 191 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEE
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEc
Confidence 3456777764 588998877777777665
No 21
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.78 E-value=0.31 Score=35.84 Aligned_cols=91 Identities=7% Similarity=0.099 Sum_probs=53.6
Q ss_pred CCCCceeEeeeC-CcCC----CceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEE
Q 042294 8 PKTGTVELVANL-PGFP----DNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVIS 82 (131)
Q Consensus 8 ~k~G~~e~f~~L-PG~P----DNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~ 82 (131)
++.|+.+.+... ++.| ..|..|++|++|++-...... +.. .....+.+.
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------------------~~~--------~~~~~~~l~ 133 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------------------PAV--------LERHQGALY 133 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------------------TTB--------CCTTCEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc------------------ccc--------ccCCCcEEE
Confidence 456777777643 3333 448899999999986542110 000 012346688
Q ss_pred EEcCCCeEEEEEECCCCCcccceEEEEEe--CCEEEEecCCCCeEEEee
Q 042294 83 LFNENGEILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 83 ~v~~~G~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~ 129 (131)
+++.+|++.....+. ....++... +.+||+.......|.+++
T Consensus 134 ~~d~~g~~~~~~~~~-----~~pngi~~spdg~~lyv~~~~~~~i~~~~ 177 (297)
T 3g4e_A 134 SLFPDHHVKKYFDQV-----DISNGLDWSLDHKIFYYIDSLSYSVDAFD 177 (297)
T ss_dssp EECTTSCEEEEEEEE-----SBEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred EEECCCCEEEEeecc-----ccccceEEcCCCCEEEEecCCCCcEEEEe
Confidence 888888776544331 223445443 446888777667776665
No 22
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.74 E-value=0.13 Score=37.38 Aligned_cols=31 Identities=26% Similarity=0.441 Sum_probs=21.4
Q ss_pred CCCceeEeee-----CCcCCCceeecCC-CCEEEEee
Q 042294 9 KTGTVELVAN-----LPGFPDNVRINER-GQFWVAID 39 (131)
Q Consensus 9 k~G~~e~f~~-----LPG~PDNI~~~~~-G~~Wval~ 39 (131)
+.|+.+.+.. ..+.|-.|..+++ |++||+..
T Consensus 54 ~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 54 KTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp TTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET
T ss_pred CCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC
Confidence 4555555542 3356888899999 99999854
No 23
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.67 E-value=0.53 Score=36.87 Aligned_cols=72 Identities=15% Similarity=0.311 Sum_probs=52.9
Q ss_pred CCCceeecCCCCEEEEee-cCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEc-CCCeEEEEEECC--
Q 042294 22 FPDNVRINERGQFWVAID-CCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFN-ENGEILEVLEDP-- 97 (131)
Q Consensus 22 ~PDNI~~~~~G~~Wval~-~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~-~~G~i~~~l~d~-- 97 (131)
.|++|..|++|++||+-. .. ..|.++| ++|++......+
T Consensus 324 ~P~gia~d~dG~lyvad~~~~-------------------------------------~~I~~~~~~~G~v~~~~g~~~~ 366 (409)
T 3hrp_A 324 QPNGMTVDEDGNFYIVDGFKG-------------------------------------YCLRKLDILDGYVSTVAGQVDV 366 (409)
T ss_dssp SEEEEEECTTCCEEEEETTTT-------------------------------------CEEEEEETTTTEEEEEEECTTC
T ss_pred CCeEEEEeCCCCEEEEeCCCC-------------------------------------CEEEEEECCCCEEEEEeCCCCC
Confidence 489999999999999854 21 2377788 788876555431
Q ss_pred ----CC----CcccceEEEEEe-CCEEEEecCCCCeEEEeeC
Q 042294 98 ----RG----VVMKLVSEVKEA-QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 98 ----~g----~~~~~is~v~~~-~g~LylGS~~~~~i~~~~l 130 (131)
+| ..+....++... +|.||+....+..|-++.+
T Consensus 367 ~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 367 ASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp BSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 11 124567888875 5999999999999999875
No 24
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.50 E-value=0.16 Score=42.86 Aligned_cols=79 Identities=19% Similarity=0.360 Sum_probs=47.4
Q ss_pred CceeEeeeCCcCCCc----eeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcC
Q 042294 11 GTVELVANLPGFPDN----VRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNE 86 (131)
Q Consensus 11 G~~e~f~~LPG~PDN----I~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~ 86 (131)
++.+.|..-.|+|+| |..|++|++|+|... |++.++|+
T Consensus 525 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~--------------------------------------Glv~~~d~ 566 (781)
T 3v9f_A 525 QLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGE--------------------------------------GLVCFPSA 566 (781)
T ss_dssp CEEEEECTTTTCSCSCEEEEEECTTSCEEEEETT--------------------------------------EEEEESCT
T ss_pred CeEEEccCCCCCCCCeeEEEEECCCCCEEEEECC--------------------------------------CceEEECC
Confidence 333444333466664 556889999998542 54466776
Q ss_pred CCeEEEEEECCCCCcccceEEEEE-eCCEEEEecCCCCeEEEee
Q 042294 87 NGEILEVLEDPRGVVMKLVSEVKE-AQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 87 ~G~i~~~l~d~~g~~~~~is~v~~-~~g~LylGS~~~~~i~~~~ 129 (131)
+.+....+...+|-.-..|.++.+ .+|.||+|+. ..|.+++
T Consensus 567 ~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~--~Gl~~~~ 608 (781)
T 3v9f_A 567 RNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN--TGISCYI 608 (781)
T ss_dssp TTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS--SCEEEEE
T ss_pred CCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC--CceEEEE
Confidence 554455565444433335667766 4689999984 3466554
No 25
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.25 E-value=0.093 Score=44.31 Aligned_cols=74 Identities=19% Similarity=0.424 Sum_probs=47.1
Q ss_pred CCCceeEeeeCCcCCCc----eeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEE
Q 042294 9 KTGTVELVANLPGFPDN----VRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLF 84 (131)
Q Consensus 9 k~G~~e~f~~LPG~PDN----I~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v 84 (131)
+.++.+.|-...|+|+| |..|++|++|++... | +.++
T Consensus 570 ~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~~--------------------------------------G-l~~~ 610 (795)
T 4a2l_A 570 KDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTNR--------------------------------------G-ISCF 610 (795)
T ss_dssp TTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEETT--------------------------------------E-EEEE
T ss_pred CCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcCC--------------------------------------c-eEEE
Confidence 34444444444588888 677899999998642 3 6677
Q ss_pred cCCCeEEEEEECCCCCcccce--EEEEE-eCCEEEEecCC
Q 042294 85 NENGEILEVLEDPRGVVMKLV--SEVKE-AQGKLWIGTVA 121 (131)
Q Consensus 85 ~~~G~i~~~l~d~~g~~~~~i--s~v~~-~~g~LylGS~~ 121 (131)
|++.+.+..+...+|-....+ .++.. .+|.||+|+..
T Consensus 611 ~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 611 NPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGIN 650 (795)
T ss_dssp ETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETT
T ss_pred cCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCC
Confidence 776666667765555322222 33444 57899999865
No 26
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.13 E-value=0.21 Score=36.35 Aligned_cols=27 Identities=7% Similarity=0.121 Sum_probs=20.6
Q ss_pred eeEeeeCCcCCCceeecCCCCEEEEee
Q 042294 13 VELVANLPGFPDNVRINERGQFWVAID 39 (131)
Q Consensus 13 ~e~f~~LPG~PDNI~~~~~G~~Wval~ 39 (131)
.+.|..-.+.|-.|..+++|.+|++..
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~ 87 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSH 87 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEET
T ss_pred eEEEECCCCCcceeeECCCCcEEEEec
Confidence 555554446788899999999999865
No 27
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.08 E-value=0.45 Score=37.32 Aligned_cols=92 Identities=13% Similarity=0.049 Sum_probs=58.6
Q ss_pred eeeeeCCCCCceeEeeeCC--------------cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhh
Q 042294 2 KYWLEGPKTGTVELVANLP--------------GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMS 67 (131)
Q Consensus 2 rywl~G~k~G~~e~f~~LP--------------G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~ 67 (131)
||-|+|...|+....++|+ +.|.-|..|++|+.+|+-.-+
T Consensus 104 ~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~-------------------------- 157 (334)
T 2p9w_A 104 SFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG-------------------------- 157 (334)
T ss_dssp EEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES--------------------------
T ss_pred EEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC--------------------------
Confidence 4445555566665566775 257889999999999975421
Q ss_pred hhhhhcCCcceEEEEEEcCCCeEEEEE--ECCCCCcccceEEEEEe-CC-EEEEecCCCCeEEEeeC
Q 042294 68 FLARVMGMKMYTVISLFNENGEILEVL--EDPRGVVMKLVSEVKEA-QG-KLWIGTVAHNHIATLPY 130 (131)
Q Consensus 68 ~~~~~~~~~~~~~v~~v~~~G~i~~~l--~d~~g~~~~~is~v~~~-~g-~LylGS~~~~~i~~~~l 130 (131)
.+.+++++++|+.+..+ +.+........+++..+ +| .|+.... ...|.++++
T Consensus 158 ----------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~ 213 (334)
T 2p9w_A 158 ----------MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDV 213 (334)
T ss_dssp ----------SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEEC
T ss_pred ----------CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcC
Confidence 03389999999855543 23222333457888887 44 5555544 777777764
No 28
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.02 E-value=0.21 Score=36.55 Aligned_cols=41 Identities=15% Similarity=0.171 Sum_probs=30.8
Q ss_pred EEEEEEcCCCeEEEEEECCCCCcccceEEEEE-eCCEEEEecCCCC
Q 042294 79 TVISLFNENGEILEVLEDPRGVVMKLVSEVKE-AQGKLWIGTVAHN 123 (131)
Q Consensus 79 ~~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~-~~g~LylGS~~~~ 123 (131)
+.+.++|.+|+.+..+..+. ..++++.+ .+|+||+|+-..-
T Consensus 275 ggl~~~d~~g~~~~~~~~~~----~~~~~~~~d~~g~l~~gt~~G~ 316 (330)
T 3hxj_A 275 GHLYAINPDGTEKWNFETGS----WIIATPVIDENGTIYFGTRNGK 316 (330)
T ss_dssp CEEEEECTTSCEEEEEECSS----CCCSCCEECTTCCEEEECTTSC
T ss_pred CCEEEECCCCcEEEEEEcCC----ccccceEEcCCCEEEEEcCCCe
Confidence 45888999999988887653 24556666 7899999987653
No 29
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.86 E-value=1 Score=33.73 Aligned_cols=87 Identities=15% Similarity=0.113 Sum_probs=55.5
Q ss_pred CCceeEeeeCCcCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcC-CC
Q 042294 10 TGTVELVANLPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNE-NG 88 (131)
Q Consensus 10 ~G~~e~f~~LPG~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~-~G 88 (131)
.|+...-+..+..|..|..+++|++|++....... .+ + ....+.|..+|. ++
T Consensus 161 t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~-----------------~~--~--------~~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 161 TDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEG-----------------SP--Y--------GYEAPSLYRIDAETF 213 (328)
T ss_dssp TTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTT-----------------CS--S--------CBCCCEEEEEETTTT
T ss_pred CCeEEEEEEcCCCccceEEcCCCCEEEEECCCccC-----------------Cc--c--------ccCCceEEEEECCCC
Confidence 34333333456679999999999999987642110 00 0 011255888886 58
Q ss_pred eEEEEEECCCCCcccceEEEEEe--CCEEEEecCCCCeEEEee
Q 042294 89 EILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 89 ~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~ 129 (131)
+++..+.-+.|. ...++... +++||+.+- .|.+++
T Consensus 214 ~v~~~~~~~~g~---~p~~la~~~d~~~lyv~~~---~v~~~d 250 (328)
T 3dsm_A 214 TVEKQFKFKLGD---WPSEVQLNGTRDTLYWINN---DIWRMP 250 (328)
T ss_dssp EEEEEEECCTTC---CCEEEEECTTSCEEEEESS---SEEEEE
T ss_pred eEEEEEecCCCC---CceeEEEecCCCEEEEEcc---EEEEEE
Confidence 998888776553 45777775 688998764 555554
No 30
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.83 E-value=0.26 Score=35.00 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=43.8
Q ss_pred CCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCCCc
Q 042294 22 FPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVV 101 (131)
Q Consensus 22 ~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g~~ 101 (131)
.|..|..|++|++||+-... +.+.++|.+|..........
T Consensus 151 ~p~~i~~~~~g~l~v~~~~~-------------------------------------~~i~~~~~~~~~~~~~~~~~--- 190 (270)
T 1rwi_B 151 DPDGVAVDNSGNVYVTDTDN-------------------------------------NRVVKLEAESNNQVVLPFTD--- 190 (270)
T ss_dssp SCCCEEECTTCCEEEEEGGG-------------------------------------TEEEEECTTTCCEEECCCSS---
T ss_pred CceeEEEeCCCCEEEEECCC-------------------------------------CEEEEEecCCCceEeecccC---
Confidence 68999999999999975421 22566666655433322111
Q ss_pred ccceEEEEEe-CCEEEEecCCCCeEEEeeC
Q 042294 102 MKLVSEVKEA-QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 102 ~~~is~v~~~-~g~LylGS~~~~~i~~~~l 130 (131)
+..+.++... +|+||++...+..|.+++.
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 2456666664 4688888877777776653
No 31
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.56 E-value=0.64 Score=34.66 Aligned_cols=73 Identities=15% Similarity=0.308 Sum_probs=53.6
Q ss_pred CCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCC-C
Q 042294 22 FPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPR-G 99 (131)
Q Consensus 22 ~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~-g 99 (131)
.|..|..++ +|.+||+-... ...|.++|.+|+.+..+.... +
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~------------------------------------~~~I~~~~~~g~~~~~~~~~g~~ 187 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC------------------------------------NSRIVQFSPSGKFVTQWGEESSG 187 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS------------------------------------CCEEEEECTTSCEEEEECEECCS
T ss_pred CCcEEEEeCCCCeEEEEeCCC------------------------------------CCeEEEEcCCCCEEEEeccCCCC
Confidence 588999998 89999985311 134788889999998875321 1
Q ss_pred -----CcccceEEEEEe-C-CEEEEecCCCCeEEEeeC
Q 042294 100 -----VVMKLVSEVKEA-Q-GKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 100 -----~~~~~is~v~~~-~-g~LylGS~~~~~i~~~~l 130 (131)
..+....++... + ++||+....+..|-+++.
T Consensus 188 ~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~ 225 (329)
T 3fvz_A 188 SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKT 225 (329)
T ss_dssp SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEEC
Confidence 234567788774 3 899999999988888764
No 32
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.14 E-value=0.62 Score=39.14 Aligned_cols=58 Identities=12% Similarity=0.491 Sum_probs=41.7
Q ss_pred ceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCCCcccc
Q 042294 25 NVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRGVVMKL 104 (131)
Q Consensus 25 NI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g~~~~~ 104 (131)
.|..|++|++|+|.... | +.++|.+++....+..+.|-....
T Consensus 499 ~i~~d~~g~lWigt~~~-------------------------------------G-l~~~~~~~~~~~~~~~~~~l~~~~ 540 (781)
T 3v9f_A 499 SIAQDSEGRFWIGTFGG-------------------------------------G-VGIYTPDMQLVRKFNQYEGFCSNT 540 (781)
T ss_dssp EEEECTTCCEEEEESSS-------------------------------------C-EEEECTTCCEEEEECTTTTCSCSC
T ss_pred EEEEcCCCCEEEEEcCC-------------------------------------C-EEEEeCCCCeEEEccCCCCCCCCe
Confidence 46678999999986531 2 667887776667776555443456
Q ss_pred eEEEEE-eCCEEEEecC
Q 042294 105 VSEVKE-AQGKLWIGTV 120 (131)
Q Consensus 105 is~v~~-~~g~LylGS~ 120 (131)
|.++.+ .+|.||+|+.
T Consensus 541 i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 541 INQIYRSSKGQMWLATG 557 (781)
T ss_dssp EEEEEECTTSCEEEEET
T ss_pred eEEEEECCCCCEEEEEC
Confidence 788888 5789999986
No 33
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.03 E-value=0.34 Score=40.83 Aligned_cols=47 Identities=23% Similarity=0.454 Sum_probs=30.1
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEe-CCEEEEecCCCCeEEEee
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEA-QGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~-~g~LylGS~~~~~i~~~~ 129 (131)
+.++|++.+..+.+...+|-.-..|.++.+. +|+||+|+ ...|.+++
T Consensus 564 l~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~ 611 (795)
T 4a2l_A 564 FYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFN 611 (795)
T ss_dssp EEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEE
T ss_pred ceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEc
Confidence 5667766555566654444333457777774 68999998 45666654
No 34
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=92.73 E-value=0.49 Score=37.60 Aligned_cols=50 Identities=8% Similarity=0.267 Sum_probs=36.8
Q ss_pred EEEEcCCCeEEEEEECCC--------C-----CcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 81 ISLFNENGEILEVLEDPR--------G-----VVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~--------g-----~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
|.+++++|++........ | ..+..-+++... +|.||+.-..++.|-++.+
T Consensus 367 I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 367 VRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 777888997776654321 1 124557788776 7999999999999998875
No 35
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=92.73 E-value=1.2 Score=33.17 Aligned_cols=71 Identities=14% Similarity=0.302 Sum_probs=47.4
Q ss_pred CCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCe--EEEEEECCC-
Q 042294 22 FPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGE--ILEVLEDPR- 98 (131)
Q Consensus 22 ~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~--i~~~l~d~~- 98 (131)
.|..|..|++|++||+-... ..|.++|.+|+ .+..+....
T Consensus 92 ~p~gia~d~~g~l~v~d~~~-------------------------------------~~v~~~~~~g~~~~~~~~~~~~~ 134 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVAL-------------------------------------HQVFKLDPHSKEGPLLILGRSMQ 134 (329)
T ss_dssp SEEEEEECTTSCEEEEETTT-------------------------------------TEEEEECTTCSSCCSEEESBTTB
T ss_pred CceEEEECCCCCEEEEECCC-------------------------------------CEEEEEeCCCCeEEEEEecccCC
Confidence 68899999999999874421 23677777777 566553210
Q ss_pred ----CCcccceEEEEEe--CCEEEEecC-CCCeEEEee
Q 042294 99 ----GVVMKLVSEVKEA--QGKLWIGTV-AHNHIATLP 129 (131)
Q Consensus 99 ----g~~~~~is~v~~~--~g~LylGS~-~~~~i~~~~ 129 (131)
...+....++... +|+||+..- .+..|.+++
T Consensus 135 ~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~ 172 (329)
T 3fvz_A 135 PGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS 172 (329)
T ss_dssp CCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred CCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence 1224456777775 688888874 677777765
No 36
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.43 E-value=0.33 Score=40.71 Aligned_cols=18 Identities=28% Similarity=0.669 Sum_probs=13.7
Q ss_pred CCCceeecCCCCEEEEee
Q 042294 22 FPDNVRINERGQFWVAID 39 (131)
Q Consensus 22 ~PDNI~~~~~G~~Wval~ 39 (131)
.+..|..|++|++|+|..
T Consensus 518 ~~~~i~~d~~g~lWigt~ 535 (758)
T 3ott_A 518 SPNYLLCDEDGLLWVGFH 535 (758)
T ss_dssp CEEEEEECTTSCEEEEET
T ss_pred ccceEEECCCCCEEEEec
Confidence 344577899999999863
No 37
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.87 E-value=0.73 Score=36.09 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=47.7
Q ss_pred cCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCC-
Q 042294 21 GFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPR- 98 (131)
Q Consensus 21 G~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~- 98 (131)
.||.+++.|+ +|.||++-.-. +.|.++|+++..++.+..+.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~-------------------------------------g~V~~~~~~~~~~~~~~~~~~ 55 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYK-------------------------------------GRIEVYNPKTQSHFNVVIDGA 55 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTT-------------------------------------TEEEEECTTTCCEEEECCTTT
T ss_pred cCCcCccCcCCCCEEEEEeccC-------------------------------------CEEEEEcCCCCeEEEEecCCc
Confidence 5999999976 78899975421 44888888744333334443
Q ss_pred ---CCcccceEEEEE----eCCEEEEecCC-------------CCeEEEeeCC
Q 042294 99 ---GVVMKLVSEVKE----AQGKLWIGTVA-------------HNHIATLPYP 131 (131)
Q Consensus 99 ---g~~~~~is~v~~----~~g~LylGS~~-------------~~~i~~~~l~ 131 (131)
|.....++++.. .+++||+-+-. ..++.+++|+
T Consensus 56 s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~ 108 (334)
T 2p9w_A 56 SSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLP 108 (334)
T ss_dssp CCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESS
T ss_pred cccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCC
Confidence 433345677777 45889885321 4678887763
No 38
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=91.85 E-value=1.3 Score=32.75 Aligned_cols=96 Identities=7% Similarity=0.071 Sum_probs=54.9
Q ss_pred CCceeEee-eCC----cCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEE
Q 042294 10 TGTVELVA-NLP----GFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISL 83 (131)
Q Consensus 10 ~G~~e~f~-~LP----G~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~ 83 (131)
.|+.+++. ..+ .+|..|..|+ +|++||+-...+.... .+...++. ..+.+.+.+
T Consensus 110 ~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~------~~~~~~~~--------------~~~~g~v~~ 169 (322)
T 2fp8_A 110 GGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDR------GVQQIMDT--------------SDKTGRLIK 169 (322)
T ss_dssp CEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTT------CHHHHHHH--------------TCCCEEEEE
T ss_pred CCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccc------ccceehcc--------------cCCCceEEE
Confidence 35556665 333 2688999999 9999999654321110 01111110 124477899
Q ss_pred EcCC-CeEEEEEECCCCCcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 84 FNEN-GEILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 84 v~~~-G~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
+|.+ |++...... +.....+... +..||++...+..|.++++
T Consensus 170 ~d~~~~~~~~~~~~-----~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~ 214 (322)
T 2fp8_A 170 YDPSTKETTLLLKE-----LHVPGGAEVSADSSFVLVAEFLSHQIVKYWL 214 (322)
T ss_dssp EETTTTEEEEEEEE-----ESCCCEEEECTTSSEEEEEEGGGTEEEEEES
T ss_pred EeCCCCEEEEeccC-----CccCcceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 9976 554332221 1233445553 3579999888888888764
No 39
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=91.82 E-value=0.66 Score=38.97 Aligned_cols=69 Identities=25% Similarity=0.449 Sum_probs=42.6
Q ss_pred CCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEc-CCCeEEEEEECCCCC
Q 042294 22 FPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFN-ENGEILEVLEDPRGV 100 (131)
Q Consensus 22 ~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~-~~G~i~~~l~d~~g~ 100 (131)
.||||.+|++|++||+--+.-+..-++ ....... ++..+ ..|++.+-+..|.|
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~------------------------~~~gnn~-~~~~~~~~g~~~rf~~~P~g- 530 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDF------------------------AGMGNNQ-MLCADPATGEIRRFMVGPIG- 530 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGG------------------------TTTCSCE-EEEECTTTCCEEEEEECCTT-
T ss_pred CCcceEECCCCCEEEEecCCCcccccc------------------------cccccce-EEEEeCCCCeEEEEEeCCCC-
Confidence 699999999999999975431110000 0001122 33344 45888888888765
Q ss_pred cccceEEEEEe--CCEEEEe
Q 042294 101 VMKLVSEVKEA--QGKLWIG 118 (131)
Q Consensus 101 ~~~~is~v~~~--~g~LylG 118 (131)
..+|++++. +.+||+.
T Consensus 531 --aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 --CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp --CEEEEEEECTTSSEEEEE
T ss_pred --ccCcCeeECCCCCEEEEE
Confidence 467888885 3567764
No 40
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.47 E-value=0.9 Score=33.02 Aligned_cols=45 Identities=11% Similarity=0.165 Sum_probs=29.7
Q ss_pred EEEEEEcCCCeEEEEEECCCCCcccceEEEEE-eCCEEEEecCCCCeEEEe
Q 042294 79 TVISLFNENGEILEVLEDPRGVVMKLVSEVKE-AQGKLWIGTVAHNHIATL 128 (131)
Q Consensus 79 ~~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~-~~g~LylGS~~~~~i~~~ 128 (131)
+.+.++|.+|+.+..+....+ .++++.. .+|+||+|+..+ .|.++
T Consensus 235 ~gl~~~~~~g~~~~~~~~~~~----~~~~~~~~~~g~l~v~t~~g-gl~~~ 280 (330)
T 3hxj_A 235 GHLYAINPDGTEKWRFKTGKR----IESSPVIGNTDTIYFGSYDG-HLYAI 280 (330)
T ss_dssp TEEEEECTTSCEEEEEECSSC----CCSCCEECTTSCEEEECTTC-EEEEE
T ss_pred CeEEEECCCCCEeEEeeCCCC----ccccceEcCCCeEEEecCCC-CEEEE
Confidence 457888989999888876532 2333444 479999998643 44444
No 41
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=91.03 E-value=3.1 Score=29.66 Aligned_cols=69 Identities=10% Similarity=0.055 Sum_probs=46.6
Q ss_pred cCCCceeecCCC-CEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCC
Q 042294 21 GFPDNVRINERG-QFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRG 99 (131)
Q Consensus 21 G~PDNI~~~~~G-~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g 99 (131)
+.|.+|..|++| .+|++-... ..|.++|.+|.-...+-+. +
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~-------------------------------------~~I~~~~~~g~~~~~~~~~-~ 208 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGT-------------------------------------HRAECLNPAQPGRRKVLEG-L 208 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------------------------------------TEEEEEETTEEEEEEEEEC-C
T ss_pred CCCcEEEEcCCCCEEEEEECCC-------------------------------------CEEEEEecCCCceEEEecC-C
Confidence 579999999864 677765431 2266677776655544331 1
Q ss_pred CcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 100 VVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 100 ~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
....++...+++||.....++.|.+++.
T Consensus 209 ---~~P~gi~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 209 ---QYPFAVTSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp ---CSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ---CCceEEEEeCCEEEEEECCCCeEEEEeC
Confidence 2335566678999999999999988864
No 42
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.76 E-value=0.83 Score=36.27 Aligned_cols=70 Identities=11% Similarity=0.065 Sum_probs=46.3
Q ss_pred cCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCC-CeEEEE-EECC
Q 042294 21 GFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNEN-GEILEV-LEDP 97 (131)
Q Consensus 21 G~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~-G~i~~~-l~d~ 97 (131)
..|..|..|+ +|.+||+-.. .+.|.++|.+ |++... +...
T Consensus 228 ~~P~giavd~~~G~lyv~d~~-------------------------------------~~~V~~~d~~~g~~~~~~~~~~ 270 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYH-------------------------------------HAMISSYDPATGTLTEEEVMMD 270 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTT-------------------------------------CSEEEEECTTTCCEEEEEEECS
T ss_pred CCCCEEEEeCCCCeEEEEECC-------------------------------------CCEEEEEECCCCeEEEEEeccC
Confidence 3689999998 8899987432 1347888876 877444 3332
Q ss_pred CCCcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 98 RGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 98 ~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
. . ..-..+... +++||+....+..|.++++
T Consensus 271 ~-~--~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 271 T-K--GSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp C-C--SSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred C-C--CCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 2 1 222345553 4569999999999988764
No 43
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=90.65 E-value=1.3 Score=32.62 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=32.7
Q ss_pred EEEEEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 79 TVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 79 ~~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
+.|.++|.+|+++-.+..+. . + .+.....+|.+++.+..+..|..++
T Consensus 146 ~~v~~~d~~G~~~w~~~~~~-~--~-~~~~~~~~g~~~v~~~~~~~v~~~d 192 (276)
T 3no2_A 146 SEVREIAPNGQLLNSVKLSG-T--P-FSSAFLDNGDCLVACGDAHCFVQLN 192 (276)
T ss_dssp TEEEEECTTSCEEEEEECSS-C--C-CEEEECTTSCEEEECBTTSEEEEEC
T ss_pred CEEEEECCCCCEEEEEECCC-C--c-cceeEcCCCCEEEEeCCCCeEEEEe
Confidence 55899999999999998753 2 1 2333345677888777777776654
No 44
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.62 E-value=1.7 Score=34.83 Aligned_cols=26 Identities=19% Similarity=0.385 Sum_probs=22.1
Q ss_pred ceeEee-eCCcCCCceeecCCCCEEEEe
Q 042294 12 TVELVA-NLPGFPDNVRINERGQFWVAI 38 (131)
Q Consensus 12 ~~e~f~-~LPG~PDNI~~~~~G~~Wval 38 (131)
+.|+|+ +|. .|=.|.++++|++||+-
T Consensus 18 ~~~~~a~~l~-~P~~~a~~pdG~l~V~e 44 (454)
T 1cru_A 18 DKKVILSNLN-KPHALLWGPDNQIWLTE 44 (454)
T ss_dssp CEEEEECCCS-SEEEEEECTTSCEEEEE
T ss_pred EEEEEECCCC-CceEEEEcCCCcEEEEE
Confidence 567888 676 69999999999999974
No 45
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=90.51 E-value=3.1 Score=30.32 Aligned_cols=32 Identities=16% Similarity=0.274 Sum_probs=22.9
Q ss_pred CCCceeEee-eCCcCCCceeecCCCCEEEEeec
Q 042294 9 KTGTVELVA-NLPGFPDNVRINERGQFWVAIDC 40 (131)
Q Consensus 9 k~G~~e~f~-~LPG~PDNI~~~~~G~~Wval~~ 40 (131)
+.|+...+. ..++.|-.|..+++|++|++...
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 74 ETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp TTCCEEEEEECSSSSEEEEEECTTSCEEEEECT
T ss_pred CCCcEEEEeeCCCCCcceEEECCCCcEEEEeCC
Confidence 345555554 44567888999999999998653
No 46
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=90.26 E-value=2.5 Score=31.53 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=29.4
Q ss_pred EEEEEEcCCCeEEEEEECCCCCcccceEEEEE-eCCEEEEecCCCCeEEEee
Q 042294 79 TVISLFNENGEILEVLEDPRGVVMKLVSEVKE-AQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 79 ~~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~-~~g~LylGS~~~~~i~~~~ 129 (131)
+.++++|.+|++++.+.-. |. ....+++. .++.+|+.+=..+.+.+++
T Consensus 49 ~~I~~ld~~g~v~~~i~l~-g~--~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 49 AAIVEMTTNGDLIRTIPLD-FV--KDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp EEEEEEETTCCEEEEEECS-SC--SSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred CeEEEEeCCCCEEEEEecC-CC--CChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 4588999889999998532 21 23444444 4567777654555555443
No 47
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.23 E-value=0.87 Score=35.11 Aligned_cols=26 Identities=23% Similarity=0.314 Sum_probs=21.2
Q ss_pred ceeEee-eCCcCCCceeecCCCCEEEEe
Q 042294 12 TVELVA-NLPGFPDNVRINERGQFWVAI 38 (131)
Q Consensus 12 ~~e~f~-~LPG~PDNI~~~~~G~~Wval 38 (131)
+.|+++ +|. .|-.|..+++|++||+-
T Consensus 20 ~~~~va~~l~-~P~~ia~~pdG~l~V~e 46 (354)
T 3a9g_A 20 KISEVASDLE-VPWSIAPLGGGRYLVTE 46 (354)
T ss_dssp EEEEEECSCS-CEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCC-CCeEEEEcCCCeEEEEe
Confidence 566777 565 69999999999999974
No 48
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=90.13 E-value=1.8 Score=31.82 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=32.6
Q ss_pred EEEEEEcCC-CeEEEEEECC--CCCcccceEEEEE-eCCEEEEecCC
Q 042294 79 TVISLFNEN-GEILEVLEDP--RGVVMKLVSEVKE-AQGKLWIGTVA 121 (131)
Q Consensus 79 ~~v~~v~~~-G~i~~~l~d~--~g~~~~~is~v~~-~~g~LylGS~~ 121 (131)
+.|+++|++ |+++-.+... .+..+..++++.. .+|.+|+++..
T Consensus 186 ~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~ 232 (276)
T 3no2_A 186 HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQ 232 (276)
T ss_dssp SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEEC
T ss_pred CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEecc
Confidence 458999988 9999999743 3334566787777 58999999863
No 49
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=90.12 E-value=3.8 Score=29.19 Aligned_cols=72 Identities=13% Similarity=0.068 Sum_probs=47.3
Q ss_pred cCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCC
Q 042294 21 GFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRG 99 (131)
Q Consensus 21 G~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g 99 (131)
..|..|..|+ +|.+|++-... ..+.+.+++.+|+..+.+....
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~-----------------------------------~~~~I~~~~~dg~~~~~~~~~~- 165 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNR-----------------------------------DNPKIETSHMDGTNRRILAQDN- 165 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCS-----------------------------------SSCEEEEEETTSCCCEEEECTT-
T ss_pred CCccEEEEeeCCCEEEEEECCC-----------------------------------CCcEEEEEecCCCCcEEEEECC-
Confidence 4689999998 56778764321 0133566677777666665322
Q ss_pred CcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 100 VVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 100 ~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
+....++... +++||+....++.|.++++
T Consensus 166 --~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 166 --LGLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp --CSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred --CCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 2345566553 5789999988888888765
No 50
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.99 E-value=0.59 Score=35.96 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=24.0
Q ss_pred CCCCceeEee-eCCcCCCceeecCCCC-EEEEee
Q 042294 8 PKTGTVELVA-NLPGFPDNVRINERGQ-FWVAID 39 (131)
Q Consensus 8 ~k~G~~e~f~-~LPG~PDNI~~~~~G~-~Wval~ 39 (131)
|..=+.|+|+ +|. .|-.|..+++|+ +||+-.
T Consensus 5 p~g~~~~~va~~l~-~P~~i~~~pdG~~l~V~e~ 37 (353)
T 2g8s_A 5 PATVNVEVLQDKLD-HPWALAFLPDNHGMLITLR 37 (353)
T ss_dssp -CCSEEEEEEEEES-SEEEEEECSTTCCEEEEET
T ss_pred CCCcEEEEEECCCC-CcEEEEEcCCCCEEEEEeC
Confidence 4344788888 676 699999999999 999743
No 51
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=89.93 E-value=2.7 Score=32.07 Aligned_cols=69 Identities=12% Similarity=0.090 Sum_probs=47.3
Q ss_pred cCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCC
Q 042294 21 GFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRG 99 (131)
Q Consensus 21 G~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g 99 (131)
..|.+|..|. +|.+|++=... ..|.++|.+|+-.+.+-...
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~~-------------------------------------~~I~~~~~dG~~~~~~~~~~- 244 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAKH-------------------------------------HVIERANLDGSHRKAVISQG- 244 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------------------------------------TEEEEEETTSCSCEEEECSS-
T ss_pred CCcceEEEeCCCCEEEEEECCC-------------------------------------CEEEEEeCCCCceEEEEeCC-
Confidence 4699999994 66777764321 23667777776555543322
Q ss_pred CcccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 100 VVMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 100 ~~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
+....++...+++||.....+..|.+++
T Consensus 245 --~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 245 --LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp --CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred --CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 3455667678899999999999888875
No 52
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=89.61 E-value=1.3 Score=37.32 Aligned_cols=70 Identities=21% Similarity=0.372 Sum_probs=45.7
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcC-CCeEEEEEECCCC
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNE-NGEILEVLEDPRG 99 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~-~G~i~~~l~d~~g 99 (131)
..||||.+|++|++|++--..-. ....+. . .....|+++++ +|++...+..|.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~------------------~~g~~~------~-~gnn~v~~~dp~tGel~~fl~~P~~ 530 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSS------------------NAGDFA------G-MGNNQMLCADPATGEIRRFMVGPIG 530 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCC------------------CSGGGT------T-CCSCEEEEECTTTCCEEEEEECCTT
T ss_pred CCCCceEECCCCCEEEEeCCCcC------------------cccccc------c-cCCceEEEEeCCCCeEEEEEeCCCC
Confidence 46999999999999997543211 000000 0 11224777886 6888888877764
Q ss_pred CcccceEEEEEe--CCEEEEe
Q 042294 100 VVMKLVSEVKEA--QGKLWIG 118 (131)
Q Consensus 100 ~~~~~is~v~~~--~g~LylG 118 (131)
..++.+.+. +.+||+.
T Consensus 531 ---aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 531 ---CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp ---CEEEEEEECTTSSEEEEE
T ss_pred ---ccccCCEECCCCCEEEEE
Confidence 467888886 3578875
No 53
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=89.20 E-value=3 Score=31.83 Aligned_cols=29 Identities=24% Similarity=0.180 Sum_probs=23.6
Q ss_pred CCceeEee-eCCcCCCceeecCCCCEEEEee
Q 042294 10 TGTVELVA-NLPGFPDNVRINERGQFWVAID 39 (131)
Q Consensus 10 ~G~~e~f~-~LPG~PDNI~~~~~G~~Wval~ 39 (131)
.-+.|+++ +|. .|-.|..+++|++||+-.
T Consensus 20 ~~~~~~va~~l~-~P~~ia~~pdG~l~V~e~ 49 (352)
T 2ism_A 20 GLRVEEVVGGLE-VPWALAFLPDGGMLIAER 49 (352)
T ss_dssp CCCEEEEECCCS-CEEEEEECTTSCEEEEET
T ss_pred CcEEEEEECCCC-CceEEEEcCCCeEEEEeC
Confidence 34678888 677 599999999999999743
No 54
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=89.14 E-value=5.1 Score=29.74 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=21.5
Q ss_pred CCCCceeEeeeCC-c----CCCceeecCCCCEEEEeec
Q 042294 8 PKTGTVELVANLP-G----FPDNVRINERGQFWVAIDC 40 (131)
Q Consensus 8 ~k~G~~e~f~~LP-G----~PDNI~~~~~G~~Wval~~ 40 (131)
++.|+.+.+...+ + .|..+..|++|++|++-..
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~ 153 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMG 153 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEE
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCC
Confidence 3456666665432 2 3456788999999998653
No 55
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=88.91 E-value=3.5 Score=31.85 Aligned_cols=46 Identities=11% Similarity=0.052 Sum_probs=32.4
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
|.++|.+|+-.+.+-... +....++...+++||.....+..|.+++
T Consensus 270 I~~~d~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 270 IERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEECTTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCeeEEEEECC---CCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 677777776555544322 3455677778889999999888888875
No 56
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.84 E-value=2.6 Score=32.82 Aligned_cols=27 Identities=19% Similarity=0.457 Sum_probs=23.8
Q ss_pred ceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 104 LVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 104 ~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
..+.+.+.+|.+|.+.+....|.++++
T Consensus 264 ap~G~~~~~g~~~~~~l~~~~l~~v~~ 290 (347)
T 3das_A 264 SPSGIAYAEGSVWMAGLRGERLWRIPL 290 (347)
T ss_dssp CEEEEEEETTEEEEEESTTCSEEEEEE
T ss_pred CCcceEEEcCceeeccccCCEEEEEEe
Confidence 457888999999999999999999875
No 57
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=88.72 E-value=3.2 Score=31.08 Aligned_cols=77 Identities=10% Similarity=0.190 Sum_probs=49.4
Q ss_pred CCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcC-CCeEEEEEECCC--
Q 042294 22 FPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNE-NGEILEVLEDPR-- 98 (131)
Q Consensus 22 ~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~-~G~i~~~l~d~~-- 98 (131)
.|-+|.+|++|++||+=... . . .....++++|. +|++++.+.-+.
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~--~-------------------~-----------~~~~~i~~~d~~tg~~~~~~~~~~~~ 115 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGN--Q-------------------S-----------KSVPKLVAWDTLNNQLSRVIYLPPPI 115 (343)
T ss_dssp CEEEEEECSSSEEEEEECHH--H-------------------H-----------TSCCEEEEEETTTTEEEEEEECCTTT
T ss_pred EeeEEEEcCCCcEEEEcCCC--C-------------------c-----------CCCCeEEEEECCCCeEEEEEECChhh
Confidence 57788999999999974321 0 0 01133788885 599888886432
Q ss_pred CCcccceEEEEEe--CCEEEEecC---CCCeEEEeeC
Q 042294 99 GVVMKLVSEVKEA--QGKLWIGTV---AHNHIATLPY 130 (131)
Q Consensus 99 g~~~~~is~v~~~--~g~LylGS~---~~~~i~~~~l 130 (131)
+.....+.++... ++++|++.. ....|-++++
T Consensus 116 ~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~ 152 (343)
T 2qe8_A 116 TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL 152 (343)
T ss_dssp SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET
T ss_pred cccccccceEEEecCCCEEEEEcCccCCCCeEEEEEC
Confidence 1212345666665 689999976 6667766654
No 58
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=88.69 E-value=6 Score=29.45 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=34.2
Q ss_pred EEEEEcCCCeEEEEEECCCCCcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 80 VISLFNENGEILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 80 ~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
.+.+++.+|+..+.+-... +....++... +++||.....+..|.++++
T Consensus 144 ~I~~~~~dG~~~~~~~~~~---~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 144 KIKKGGLNGVDIYSLVTEN---IQWPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp EEEEEETTSCCEEEEECSS---CSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eEEEEcCCCCCeEEEEECC---CCCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 4777788888777765422 3445666664 6899999888888888775
No 59
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.91 E-value=1.8 Score=36.14 Aligned_cols=47 Identities=17% Similarity=0.143 Sum_probs=25.2
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEE-eCCEEEEecCCCCeEEEee
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKE-AQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~-~~g~LylGS~~~~~i~~~~ 129 (131)
+.++|++.+.+..+..........+.++.+ .+|.||+|+- ..|.+++
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~--~Gl~~~~ 542 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFH--GGVMRIN 542 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEET--TEEEEEC
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEec--CceEEEe
Confidence 566675433344443211111134666666 5689999984 3566654
No 60
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=87.91 E-value=7.3 Score=29.54 Aligned_cols=78 Identities=15% Similarity=0.179 Sum_probs=48.7
Q ss_pred ceeEee--eCCcCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCC
Q 042294 12 TVELVA--NLPGFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENG 88 (131)
Q Consensus 12 ~~e~f~--~LPG~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G 88 (131)
..+.++ .+ ..|.+|..|. +|++|++-... ..+.+++.+|
T Consensus 106 ~~~~~~~~~~-~~p~glavd~~~g~ly~~d~~~-------------------------------------~~I~~~~~dG 147 (349)
T 3v64_C 106 NVEEVVSTGL-ESPGGLAVDWVHDKLYWTDSGT-------------------------------------SRIEVANLDG 147 (349)
T ss_dssp SCEEEECSSC-SCCCEEEEETTTTEEEEEETTT-------------------------------------TEEEEEETTS
T ss_pred CceEEEeCCC-CCccEEEEecCCCeEEEEcCCC-------------------------------------CeEEEEcCCC
Confidence 344554 34 4699999995 66776654321 1255667777
Q ss_pred eEEEEEECCCCCcccceEEEEEe--CCEEEEecCCC-CeEEEeeC
Q 042294 89 EILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAH-NHIATLPY 130 (131)
Q Consensus 89 ~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~-~~i~~~~l 130 (131)
+....+-... +....++... +|+||.....+ +.|.++++
T Consensus 148 ~~~~~l~~~~---l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 148 AHRKVLLWQS---LEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp CSCEEEECTT---CSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CceEEEEeCC---CCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 7666655432 2334555554 78899888777 78887764
No 61
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=87.89 E-value=4.3 Score=35.01 Aligned_cols=48 Identities=13% Similarity=0.109 Sum_probs=35.7
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
|.+++.+|+-...+-... ..++...++...+++||.....+..|.+++
T Consensus 582 I~~~d~dG~~~~~v~~~~-~~l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 582 ISSIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp EEEEETTSCSCEEEEECT-TTTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEecCCCceEEEecCC-CccCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 667778887766665432 234566778788899999999999988875
No 62
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=87.87 E-value=6.1 Score=29.40 Aligned_cols=48 Identities=13% Similarity=0.109 Sum_probs=33.0
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
|.++|.+|+-.+.+-... ..+....++...+++||.....+..|.+++
T Consensus 188 I~~~d~dg~~~~~~~~~~-~~~~~P~giav~~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 188 ISSIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp EEEEETTSCSCEEEEECT-TTTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEecCCCceEEEeecC-CccCCcEEEEEECCEEEEEECCCCeEEEEe
Confidence 667777776666654321 123455677777899999998888888875
No 63
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.25 E-value=8.6 Score=29.59 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=43.5
Q ss_pred CceeEee--eCCcCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCC
Q 042294 11 GTVELVA--NLPGFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNEN 87 (131)
Q Consensus 11 G~~e~f~--~LPG~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~ 87 (131)
+..+.++ .+. .|.+|..|. .|++|++-... ..+.+++.+
T Consensus 148 ~~~~~~~~~~~~-~p~glavd~~~g~lY~~d~~~-------------------------------------~~I~~~~~d 189 (386)
T 3v65_B 148 SNVEEVVSTGLE-SPGGLAVDWVHDKLYWTDSGT-------------------------------------SRIEVANLD 189 (386)
T ss_dssp CCEEEEECSSCS-CCCCEEEETTTTEEEEEETTT-------------------------------------TEEEECBTT
T ss_pred CCcEEEEeCCCC-CccEEEEEeCCCeEEEEcCCC-------------------------------------CeEEEEeCC
Confidence 3345554 343 699999995 56776654431 124445556
Q ss_pred CeEEEEEECCCCCcccceEEEEEe--CCEEEEecCCC-CeEEEeeC
Q 042294 88 GEILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAH-NHIATLPY 130 (131)
Q Consensus 88 G~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~-~~i~~~~l 130 (131)
|+....+-... +....++... +++||...... +.|.++++
T Consensus 190 g~~~~~l~~~~---l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 190 GAHRKVLLWQS---LEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp SCSCEEEECSS---CSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCceEEeecCC---CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 66555544321 2233444443 57777776666 66666653
No 64
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=87.23 E-value=6.9 Score=29.46 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=34.1
Q ss_pred EEEEEcCCCeEEEEEECCCCCcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 80 VISLFNENGEILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 80 ~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
.+.+++.+|+....+-+.. +..-.+++.. +++||..-..+..|.++++
T Consensus 146 ~I~r~~~dG~~~~~~~~~~---l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 146 KIERAGMDGSSRFIIINSE---IYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EEEEEETTSCSCEEEECSS---CSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEEEcCCCCeEEEEECC---CCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 4777888888776665432 3344566664 7899999888888888875
No 65
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=86.88 E-value=5.4 Score=30.41 Aligned_cols=27 Identities=11% Similarity=0.186 Sum_probs=21.8
Q ss_pred ceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 104 LVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 104 ~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
..+++...+|.||++.+.+..|.++++
T Consensus 269 ap~G~~~~~G~l~v~~~~~~~v~~v~~ 295 (352)
T 2ism_A 269 PPGNLAFFRGDLYVAGLRGQALLRLVL 295 (352)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEEEEE
T ss_pred CCcceEEECCEEEEEECCCCEEEEEEE
Confidence 457777788899999988888888764
No 66
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.49 E-value=4.7 Score=31.39 Aligned_cols=27 Identities=22% Similarity=0.193 Sum_probs=21.7
Q ss_pred ceeEee-eCCcCCCceeecCCCCEEEEee
Q 042294 12 TVELVA-NLPGFPDNVRINERGQFWVAID 39 (131)
Q Consensus 12 ~~e~f~-~LPG~PDNI~~~~~G~~Wval~ 39 (131)
+.|+++ +|. .|=.|.++++|.+||+--
T Consensus 23 ~~~~va~gL~-~P~~ia~~pdG~llVter 50 (347)
T 3das_A 23 VLRTVATGLN-SPWGLAPLPGGDLLVSSR 50 (347)
T ss_dssp EEEEEECCCS-SEEEEEECTTSCEEEEET
T ss_pred eeEEeecCCC-CceEEEEcCCCcEEEEEe
Confidence 456777 677 599999999999999753
No 67
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=85.71 E-value=11 Score=29.25 Aligned_cols=47 Identities=15% Similarity=0.141 Sum_probs=32.0
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
+.+++.+|+....+-... +....+++.. +++||..-..+..|.++++
T Consensus 227 I~~~~~dG~~~~~~~~~~---l~~P~glavd~~~~~lY~aD~~~~~I~~~d~ 275 (400)
T 3p5b_L 227 IKKGGLNGVDIYSLVTEN---IQWPNGITLDLLSGRLYWVDSKLHSISSIDV 275 (400)
T ss_dssp EEEEETTSCSCEEEECSS---CSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEeCCCCccEEEEECC---CCceEEEEEEeCCCEEEEEECCCCEEEEEeC
Confidence 667777887666665422 2345666654 6888888888888888765
No 68
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=85.58 E-value=4.2 Score=32.00 Aligned_cols=50 Identities=14% Similarity=0.280 Sum_probs=37.4
Q ss_pred EEEEcCCCeEEEEEECC--------CC-----CcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 81 ISLFNENGEILEVLEDP--------RG-----VVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~--------~g-----~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
|.+++++|++....... +| ..+..-.++... ++.||+.-..++.|-++.+
T Consensus 364 I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 364 IRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 77889999887776541 12 124467888875 6999999999999998865
No 69
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=85.00 E-value=7.7 Score=30.09 Aligned_cols=48 Identities=13% Similarity=0.113 Sum_probs=34.1
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
|.++|.+|+-.+.+-...+ .+....++...+++||.....+..|.+++
T Consensus 270 I~~~d~dG~~~~~~~~~~~-~l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EEEEETTSCCCEEEEECSS-TTSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred EEEEeCCCCccEEEEeCCC-CCCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 6677777876666543222 24556677778899999998888888775
No 70
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=84.50 E-value=10 Score=28.03 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=58.2
Q ss_pred CCCCCceeEeeeCC----cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEE
Q 042294 7 GPKTGTVELVANLP----GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVIS 82 (131)
Q Consensus 7 G~k~G~~e~f~~LP----G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~ 82 (131)
+++.-+.|++...| .|--++.++. |.+|++--.- ..+.|.
T Consensus 3 ~~~~~~~~v~~~~phd~~~ftqGL~~~~-~~LyestG~~-----------------------------------g~S~v~ 46 (243)
T 3mbr_X 3 PVPTQGYRVVKRYPHDTTAFTEGLFYLR-GHLYESTGET-----------------------------------GRSSVR 46 (243)
T ss_dssp CCCBCCEEEEEEEECCTTCCEEEEEEET-TEEEEEECCT-----------------------------------TSCEEE
T ss_pred CCcccceEEEEEcCCCCccccccEEEEC-CEEEEECCCC-----------------------------------CCceEE
Confidence 45666777776445 3444677775 7889864421 123477
Q ss_pred EEc-CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 83 LFN-ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 83 ~v~-~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
++| .+|++++...-+. . ..-.++...+++||.....++-+-+++.
T Consensus 47 ~vD~~tgkv~~~~~l~~-~--~fgeGi~~~~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 47 KVDLETGRILQRAEVPP-P--YFGAGIVAWRDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp EEETTTCCEEEEEECCT-T--CCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred EEECCCCCEEEEEeCCC-C--cceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 778 4699999987654 2 2345566778999999999988888774
No 71
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=84.27 E-value=11 Score=27.96 Aligned_cols=73 Identities=14% Similarity=0.062 Sum_probs=48.2
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcC-CCeEEEEEECCCC
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNE-NGEILEVLEDPRG 99 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~-~G~i~~~l~d~~g 99 (131)
..|-.|..+++|.+||+-... +.|..+|. +++++..+.-..+
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~-------------------------------------~~v~~iD~~t~~~~~~i~~g~~ 126 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWD-------------------------------------YRIFIINPKTYEITGYIECPDM 126 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSC-------------------------------------SEEEEEETTTTEEEEEEECTTC
T ss_pred CCCcEEEEeCCCeEEEEECCC-------------------------------------CeEEEEECCCCeEEEEEEcCCc
Confidence 468888887778888875310 23666774 5888887764331
Q ss_pred C-cccceEEEEEeCCEEEEecC-CCCeEEEeeC
Q 042294 100 V-VMKLVSEVKEAQGKLWIGTV-AHNHIATLPY 130 (131)
Q Consensus 100 ~-~~~~is~v~~~~g~LylGS~-~~~~i~~~~l 130 (131)
. ......++...+++||+++. ....|.++++
T Consensus 127 ~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 127 DMESGSTEQMVQYGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp CTTTCBCCCEEEETTEEEEEECTTCCEEEEEET
T ss_pred cccCCCcceEEEECCEEEEEcCCCCCEEEEEEC
Confidence 0 01133445558899999988 4888888875
No 72
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=83.98 E-value=12 Score=28.16 Aligned_cols=49 Identities=14% Similarity=0.046 Sum_probs=37.6
Q ss_pred EEEEEEc-CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 79 TVISLFN-ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 79 ~~v~~v~-~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
+.|.++| .+|++++.+.-+. + .+--+++..+++||.....++-+.+++.
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~-~--~FgeGit~~g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGK-R--YFGEGISDWKDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCT-T--CCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred ceEEEEECCCCcEEEEEecCC-c--cceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 5588888 4699999987653 2 2345567789999999999998888874
No 73
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=83.05 E-value=16 Score=31.45 Aligned_cols=47 Identities=15% Similarity=0.141 Sum_probs=33.4
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
|.+++.+|+....+-... +....+++.. +++||..-..++.|.++++
T Consensus 539 I~~~~~dG~~~~~lv~~~---l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 539 IKKGGLNGVDIYSLVTEN---IQWPNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp EEEEETTSCCEEEEECSS---CSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEecCCCceEEEEeCC---CCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 667777888777765432 3456666654 7899998888888888765
No 74
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=82.98 E-value=11 Score=27.13 Aligned_cols=50 Identities=6% Similarity=0.055 Sum_probs=31.8
Q ss_pred EEEEc-CCCeEEEEEECCCCCcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 81 ISLFN-ENGEILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 81 v~~v~-~~G~i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
+..+| .+|+++..+..........+.++... +++||+++.....|.++++
T Consensus 208 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 208 LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 34456 46888877765332222355666654 5779998887788877764
No 75
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=82.85 E-value=11 Score=27.10 Aligned_cols=85 Identities=16% Similarity=0.133 Sum_probs=50.6
Q ss_pred CCCceeEeeeCCcCCCceeecCCCC-EEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEc-C
Q 042294 9 KTGTVELVANLPGFPDNVRINERGQ-FWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFN-E 86 (131)
Q Consensus 9 k~G~~e~f~~LPG~PDNI~~~~~G~-~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~-~ 86 (131)
+.|+....+..++.|..+..+++|+ +|++-... +.+..+| .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-------------------------------------~~v~~~d~~ 119 (353)
T 3vgz_A 77 VTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVN-------------------------------------SAVTAIDAK 119 (353)
T ss_dssp TTCCEEEEEEESSCCCSEEEETTTTEEEEEETTT-------------------------------------TEEEEEETT
T ss_pred CCCeEEEEEecCCCcceEEECCCCCEEEEEecCC-------------------------------------CEEEEEeCC
Confidence 4454444445567799999999998 66654321 1255556 4
Q ss_pred CCeEEEEEECCCCCcc-----cceEEEEE--eCCEEEEecCC-CCeEEEeeC
Q 042294 87 NGEILEVLEDPRGVVM-----KLVSEVKE--AQGKLWIGTVA-HNHIATLPY 130 (131)
Q Consensus 87 ~G~i~~~l~d~~g~~~-----~~is~v~~--~~g~LylGS~~-~~~i~~~~l 130 (131)
+|+++..+....+... ..+.++.. .+++||+++.. ...|.++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEET
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcC
Confidence 6888888776543210 12455555 35678888753 455666654
No 76
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=82.82 E-value=3.3 Score=33.07 Aligned_cols=30 Identities=13% Similarity=0.138 Sum_probs=22.6
Q ss_pred CceeEee-eCCc----CCCceeecCCCCEEEEeec
Q 042294 11 GTVELVA-NLPG----FPDNVRINERGQFWVAIDC 40 (131)
Q Consensus 11 G~~e~f~-~LPG----~PDNI~~~~~G~~Wval~~ 40 (131)
++.+++. .+|. ++..|.+++||.+||++-.
T Consensus 129 ~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 129 EKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 3445555 5763 5789999999999999865
No 77
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=81.09 E-value=8.8 Score=32.30 Aligned_cols=71 Identities=11% Similarity=0.164 Sum_probs=46.8
Q ss_pred cCCCceeecCC-CCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEEEEEECCCC
Q 042294 21 GFPDNVRINER-GQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEILEVLEDPRG 99 (131)
Q Consensus 21 G~PDNI~~~~~-G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~~~l~d~~g 99 (131)
..|.+|.+|.+ |.+|++=... ..|.+++.+|.-.+.+....+
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~~-------------------------------------~~I~~~d~dG~~~~~~~~~~~ 582 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSKL-------------------------------------HSISSIDVNGGNRKTILEDEK 582 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETTT-------------------------------------TEEEEECSSSSCCEEECCCSS
T ss_pred CCccEEEEeccCCEEEEEecCC-------------------------------------CeEEEEccCCCceEEEEecCC
Confidence 47999999964 6777764321 226667777765555543221
Q ss_pred CcccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 100 VVMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 100 ~~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
.+....++...+++||.....+..|.+++
T Consensus 583 -~~~~P~glavd~~~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 583 -RLAHPFSLAVFEDKVFWTDIINEAIFSAN 611 (699)
T ss_dssp -SCSSCCCCEEETTEEEEECSTTTCEEEEE
T ss_pred -cCCCceEeEEECCEEEEEeCCCCeEEEEE
Confidence 23445556667789999998888888875
No 78
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=80.73 E-value=5.3 Score=31.41 Aligned_cols=71 Identities=6% Similarity=-0.033 Sum_probs=41.2
Q ss_pred eCCcCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCeEE-EEEE
Q 042294 18 NLPGFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGEIL-EVLE 95 (131)
Q Consensus 18 ~LPG~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~i~-~~l~ 95 (131)
.+. .|..|..|+ +|.+|++-... +.|.+++.++..+ ....
T Consensus 224 ~~~-~p~giavdp~~g~lyv~d~~~-------------------------------------~~V~~~~~~~~~~~~~~~ 265 (430)
T 3tc9_A 224 KGQ-NCNGAETHPINGELYFNSWNA-------------------------------------GQVFRYDFTTQETTPLFT 265 (430)
T ss_dssp ECS-SCCCEEECTTTCCEEEEETTT-------------------------------------TEEEEEETTTTEEEEEEE
T ss_pred cCC-CceEEEEeCCCCEEEEEECCC-------------------------------------CEEEEEECCCCcEEEEEE
Confidence 444 488999998 78888875421 2366666654444 2233
Q ss_pred CCCCCcccceEEEEEe--CCEEEEecCCCCeEEEee
Q 042294 96 DPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 96 d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~ 129 (131)
.+.+ ..-..+... +.+||+....+..|.+++
T Consensus 266 ~~~~---~~P~gia~~pdG~~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 266 IQDS---GWEFHIQFHPSGNYAYIVVVNQHYILRSD 298 (430)
T ss_dssp CSSS---SCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCC---CcceeEEEcCCCCEEEEEECCCCEEEEEe
Confidence 3221 223445553 344777777777777664
No 79
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=79.08 E-value=15 Score=30.57 Aligned_cols=76 Identities=13% Similarity=0.066 Sum_probs=49.4
Q ss_pred ceeEee-eCCcCCCceeecCC-CCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCe
Q 042294 12 TVELVA-NLPGFPDNVRINER-GQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGE 89 (131)
Q Consensus 12 ~~e~f~-~LPG~PDNI~~~~~-G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~ 89 (131)
+.++++ ++. .|-+|..|.+ +.++++=... ..|.++|.+|.
T Consensus 157 ~~~~l~~~~~-~P~GlalD~~~~~LY~aD~~~-------------------------------------~~I~~~d~dG~ 198 (628)
T 4a0p_A 157 ERTTLVPNVG-RANGLTIDYAKRRLYWTDLDT-------------------------------------NLIESSNMLGL 198 (628)
T ss_dssp SCEEEECSCS-SEEEEEEETTTTEEEEEETTT-------------------------------------TEEEEEETTSC
T ss_pred ceEEEECCCC-CcceEEEccccCEEEEEECCC-------------------------------------CEEEEEcCCCC
Confidence 345555 454 6899999975 5566653321 22666676765
Q ss_pred EEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 90 ILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 90 i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
-.+.+.+. +...-++...+++||.....+..|.+++
T Consensus 199 ~~~v~~~~----l~~P~glav~~~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 199 NREVIADD----LPHPFGLTQYQDYIYWTDWSRRSIERAN 234 (628)
T ss_dssp SCEEEEEC----CSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ceEEeecc----CCCceEEEEECCEEEEecCCCCEEEEEE
Confidence 44555432 2345577777899999999888888876
No 80
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=78.28 E-value=19 Score=27.06 Aligned_cols=52 Identities=13% Similarity=0.277 Sum_probs=40.1
Q ss_pred EEEEEEcC-CCeEEEEEEC-CCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 79 TVISLFNE-NGEILEVLED-PRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 79 ~~v~~v~~-~G~i~~~l~d-~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
..+..+|+ +++++..++- ..|+.+..+.+....+|+||......+.|.+++.
T Consensus 155 ~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 155 TMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECT
T ss_pred CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeC
Confidence 34667774 5888888764 2455566778877789999999999999999874
No 81
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=78.28 E-value=19 Score=26.96 Aligned_cols=47 Identities=11% Similarity=-0.001 Sum_probs=32.2
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
|.++|.+|+-.+.+-... .....++...+++||.....+..|.+++.
T Consensus 190 I~~~d~dG~~~~~~~~~~---~~~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 190 IHKSNLDGTNRQAVVKGS---LPHPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp EEEEETTSCSCEEEECSC---CSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred EEEEcCCCCceEEEecCC---CCCceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 667777776656554322 34456666678899999888888887764
No 82
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=77.82 E-value=20 Score=26.87 Aligned_cols=51 Identities=12% Similarity=0.227 Sum_probs=39.8
Q ss_pred EEEEEcC-CCeEEEEEECC-CCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 80 VISLFNE-NGEILEVLEDP-RGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 80 ~v~~v~~-~G~i~~~l~d~-~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
.+..+|+ +.+++..++-. .|+.+..+.+....+|+||......+.|.+++.
T Consensus 147 ~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 147 VLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp EEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECT
T ss_pred eEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEEC
Confidence 3667785 48899988753 355566777777789999999999999999874
No 83
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=76.70 E-value=22 Score=28.27 Aligned_cols=83 Identities=13% Similarity=0.103 Sum_probs=51.7
Q ss_pred eCCcCCCceeecCCCC-EEEEeecC-CchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEc-CCCeEEEEE
Q 042294 18 NLPGFPDNVRINERGQ-FWVAIDCC-RTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFN-ENGEILEVL 94 (131)
Q Consensus 18 ~LPG~PDNI~~~~~G~-~Wval~~~-r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~-~~G~i~~~l 94 (131)
.+...| +|..++||+ +||+-... |. ........|..+| .+++++..+
T Consensus 116 ~vG~~P-gia~SpDgk~lyVan~~~~~~-----------------------------~~G~~~~~VsviD~~t~~vv~~I 165 (426)
T 3c75_H 116 DGGFLP-HPVAAEDGSFFAQASTVFERI-----------------------------ARGKRTDYVEVFDPVTFLPIADI 165 (426)
T ss_dssp EECSSC-EEEECTTSSCEEEEEEEEEET-----------------------------TEEEEEEEEEEECTTTCCEEEEE
T ss_pred ECCCCC-ceEECCCCCEEEEEecccccc-----------------------------ccCCCCCEEEEEECCCCcEEEEE
Confidence 445789 999999996 78876421 00 0012335678888 468898888
Q ss_pred ECCCCC-----cccceEEEEEeCCEEEEecCC-CCeEEEeeC
Q 042294 95 EDPRGV-----VMKLVSEVKEAQGKLWIGTVA-HNHIATLPY 130 (131)
Q Consensus 95 ~d~~g~-----~~~~is~v~~~~g~LylGS~~-~~~i~~~~l 130 (131)
.-+... ..+.--.+...+.+||+++.. .+.|.++++
T Consensus 166 ~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~ 207 (426)
T 3c75_H 166 ELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDL 207 (426)
T ss_dssp EETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEET
T ss_pred ECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEEC
Confidence 754111 112223333456789999875 778888875
No 84
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=76.47 E-value=11 Score=27.99 Aligned_cols=51 Identities=18% Similarity=0.254 Sum_probs=37.9
Q ss_pred eEEEEEEcCCCeEEEEEECCCC-----CcccceEEEEE-eCCEEEEecCCCCeEEEee
Q 042294 78 YTVISLFNENGEILEVLEDPRG-----VVMKLVSEVKE-AQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 78 ~~~v~~v~~~G~i~~~l~d~~g-----~~~~~is~v~~-~~g~LylGS~~~~~i~~~~ 129 (131)
..+++++|.+|+++..+.-..| +.++.--+|+. .+|+||+.|=- |.+-++.
T Consensus 194 s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~ 250 (255)
T 3qqz_A 194 SRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFT 250 (255)
T ss_dssp TTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEE
T ss_pred CCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEE
Confidence 3568999999999999876654 23567788888 46899999744 5776664
No 85
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=75.13 E-value=21 Score=27.10 Aligned_cols=29 Identities=7% Similarity=0.014 Sum_probs=22.9
Q ss_pred eeEee-eCCcCCCceeecC-CCCEEEEeecCC
Q 042294 13 VELVA-NLPGFPDNVRINE-RGQFWVAIDCCR 42 (131)
Q Consensus 13 ~e~f~-~LPG~PDNI~~~~-~G~~Wval~~~r 42 (131)
.|+++ .+- .|.+|.+|+ +|.+|++-+..+
T Consensus 189 ~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~ 219 (354)
T 3a9g_A 189 SPIWSYGHR-NPQGIDWHRASGVMVATEHGPV 219 (354)
T ss_dssp CCEEEECCS-CCCEEEECTTTCCEEEEECCSS
T ss_pred CcEEEEccC-CcceEEEeCCCCCEEEEecCCC
Confidence 46776 554 599999999 899999987754
No 86
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=74.15 E-value=22 Score=25.71 Aligned_cols=17 Identities=24% Similarity=0.620 Sum_probs=11.8
Q ss_pred CCceeecCCCCE-EEEee
Q 042294 23 PDNVRINERGQF-WVAID 39 (131)
Q Consensus 23 PDNI~~~~~G~~-Wval~ 39 (131)
|..+.+++||.+ |++..
T Consensus 242 ~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 242 AAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EEEEEECTTSCEEEEEEE
T ss_pred ceeEEECCCCCEEEEEeC
Confidence 555899999984 55543
No 87
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=73.72 E-value=30 Score=28.74 Aligned_cols=46 Identities=17% Similarity=0.097 Sum_probs=35.0
Q ss_pred EEEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 81 ISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 81 v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
+.+++.+|+-.+.+.... +....+++..+++||..-..+..|-+++
T Consensus 501 I~~~~~dG~~r~~~~~~~---~~~P~glav~~~~ly~tD~~~~~i~~~~ 546 (628)
T 4a0p_A 501 IESSDLSGANRIVLEDSN---ILQPVGLTVFENWLYWIDKQQQMIEKID 546 (628)
T ss_dssp EEEEETTSCSCEEEECSS---CSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCceEEEEcCC---CCCcEEEEEECCEEEEEECCCCeEEEEE
Confidence 667788888777776522 3456777788899999999998888775
No 88
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=71.01 E-value=23 Score=29.37 Aligned_cols=48 Identities=13% Similarity=0.129 Sum_probs=32.7
Q ss_pred EEEEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 80 VISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 80 ~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
.+.+++.+|+-.+.+.... +....++...+++||..-..+..|-+++.
T Consensus 502 ~I~~~~~dG~~~~~~~~~~---l~~P~glav~~~~ly~tD~~~~~I~~~~k 549 (619)
T 3s94_A 502 KIEVMNTDGTGRRVLVEDK---IPHIFGFTLLGDYVYWTDWQRRSIERVHK 549 (619)
T ss_dssp EEEEEESSSCCCEEEEECC---CCSSCCEEEETTEEEEECTTSSCEEEEES
T ss_pred EEEEEecCCCceEEEeccC---CCCcEEEEEECCEEEEeecCCCeEEEEEc
Confidence 3667777777666553221 23445666778899999999988888763
No 89
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=69.83 E-value=31 Score=25.52 Aligned_cols=49 Identities=10% Similarity=0.102 Sum_probs=26.7
Q ss_pred EEEEEEcCCCeEEEEEEC---CCCCcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 79 TVISLFNENGEILEVLED---PRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 79 ~~v~~v~~~G~i~~~l~d---~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
..++.++.+|++...++. ..+ ..+.++... +.+||.++...+.|.++++
T Consensus 121 v~v~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~spdG~~l~~~~~~~~~v~~~~~ 174 (365)
T 1jof_A 121 GNVFSVSETGKLEKNVQNYEYQEN---TGIHGMVFDPTETYLYSADLTANKLWTHRK 174 (365)
T ss_dssp EEEEEECTTCCEEEEEEEEECCTT---CCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEEEccCCCCcCcceEeeEEeCCC---CcceEEEECCCCCEEEEEcCCCCEEEEEEE
Confidence 446666667776554431 111 345566553 3457777665666665543
No 90
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=68.62 E-value=33 Score=25.42 Aligned_cols=52 Identities=12% Similarity=0.239 Sum_probs=37.9
Q ss_pred EEEEEEcC-CCeEEEEEECC-CCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 79 TVISLFNE-NGEILEVLEDP-RGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 79 ~~v~~v~~-~G~i~~~l~d~-~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
+.+..+|. +.+++..+.-. .|+.+....++...+|+||......+.|.+++.
T Consensus 126 ~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 126 SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISA 179 (266)
T ss_dssp SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEET
T ss_pred CeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEEC
Confidence 34667774 46888887642 234444566777778999999999999999975
No 91
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=66.61 E-value=11 Score=31.68 Aligned_cols=18 Identities=11% Similarity=0.222 Sum_probs=11.5
Q ss_pred cCCCceeecCC-CCEEEEe
Q 042294 21 GFPDNVRINER-GQFWVAI 38 (131)
Q Consensus 21 G~PDNI~~~~~-G~~Wval 38 (131)
..|.+|..|++ |.+|++-
T Consensus 496 ~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp CCCCCEECCSSSSCCEECC
T ss_pred CCcceEEEccCCCcEEEcc
Confidence 46888888864 4555543
No 92
>3it8_D 2L protein; MHC class I homolog, cell membrane, cytokine, disulfide bond glycoprotein, lipoprotein, membrane, myristate; HET: NAG; 2.80A {Yaba-like disease virus}
Probab=65.43 E-value=4.2 Score=31.67 Aligned_cols=24 Identities=21% Similarity=0.440 Sum_probs=20.2
Q ss_pred eCCcCCCceeecCCC-CE--EEEeecC
Q 042294 18 NLPGFPDNVRINERG-QF--WVAIDCC 41 (131)
Q Consensus 18 ~LPG~PDNI~~~~~G-~~--Wval~~~ 41 (131)
.=||||-+++.++|| +| |+++..+
T Consensus 246 g~~~~~~~~lPngDG~TyQ~w~sv~Vp 272 (324)
T 3it8_D 246 GEPGFPWNIKKDKDANTYSLTDLVRTT 272 (324)
T ss_dssp TSTTSCCCEECCTTSSCEEEEEEEEEC
T ss_pred CCCCCCCCeeECCCCCeEEEEEEEEEC
Confidence 458999999999999 76 8888653
No 93
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=64.65 E-value=39 Score=24.82 Aligned_cols=50 Identities=14% Similarity=0.161 Sum_probs=38.8
Q ss_pred EEEEcC-CCeEEEEEEC-CCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 81 ISLFNE-NGEILEVLED-PRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 81 v~~v~~-~G~i~~~l~d-~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
+..+|+ +.+++..++- ..|..+..+.+....+|+||......+.|.+++.
T Consensus 126 l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 126 IRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDP 177 (243)
T ss_dssp EEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECT
T ss_pred EEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEEC
Confidence 666774 5788888764 2455566777877789999999999999999874
No 94
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=64.46 E-value=40 Score=27.45 Aligned_cols=51 Identities=12% Similarity=0.148 Sum_probs=36.4
Q ss_pred EEEEEcCCCeEEEEEECC--------------CC-----CcccceEEEEEe--CCEEEEecCCCCeEEEeeC
Q 042294 80 VISLFNENGEILEVLEDP--------------RG-----VVMKLVSEVKEA--QGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 80 ~v~~v~~~G~i~~~l~d~--------------~g-----~~~~~is~v~~~--~g~LylGS~~~~~i~~~~l 130 (131)
.|.+++++|++....-.. +| ..+..-+++... +|.||+.-..+..|-++.+
T Consensus 402 rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 402 CVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISM 473 (496)
T ss_dssp EEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEEC
Confidence 377888889766554321 22 135567888875 3899999999999998865
No 95
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=64.16 E-value=47 Score=25.53 Aligned_cols=51 Identities=10% Similarity=0.100 Sum_probs=31.2
Q ss_pred EEEEEcCCCeEEEEEECC--CC--------CcccceEEEEEe-CCEEEEecC-CCCeEEEeeC
Q 042294 80 VISLFNENGEILEVLEDP--RG--------VVMKLVSEVKEA-QGKLWIGTV-AHNHIATLPY 130 (131)
Q Consensus 80 ~v~~v~~~G~i~~~l~d~--~g--------~~~~~is~v~~~-~g~LylGS~-~~~~i~~~~l 130 (131)
.|.+++.+|++....... .| ..+....++... +|+||+... .+..|-++++
T Consensus 290 ~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 290 SVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp EEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred EEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 377778888754443321 01 113446666664 577998887 7888877763
No 96
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=62.76 E-value=64 Score=26.61 Aligned_cols=79 Identities=11% Similarity=0.149 Sum_probs=46.0
Q ss_pred ceeEee-eCCcCCCceeecC-CCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcCCCe
Q 042294 12 TVELVA-NLPGFPDNVRINE-RGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNENGE 89 (131)
Q Consensus 12 ~~e~f~-~LPG~PDNI~~~~-~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~~G~ 89 (131)
..++++ .--+.|++|..|. .|+++++=... ..+..++.+|+
T Consensus 382 ~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~-------------------------------------~~I~v~~~~G~ 424 (619)
T 3s94_A 382 GSQFVVTAQIAHPDGIAVDWVARNLYWTDTGT-------------------------------------DRIEVTRLNGT 424 (619)
T ss_dssp SCEEEECSSCSCCCEEEEETTTTEEEEEETTT-------------------------------------TEEEEEETTSC
T ss_pred ccEEEEECCCCCcCceEEecccCcEEEEeCCC-------------------------------------CcEEEEeCCCC
Confidence 455666 3236799999995 66676653321 12445556676
Q ss_pred EEEEEECCCCCcccceEEEEEe--CCEEEEecCCC-CeEEEeeC
Q 042294 90 ILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAH-NHIATLPY 130 (131)
Q Consensus 90 i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~-~~i~~~~l 130 (131)
..+.+-+.. +....++... +|+||..-... +.|-+..+
T Consensus 425 ~~~~l~~~~---l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~ 465 (619)
T 3s94_A 425 MRKILISED---LEEPRAIVLDPMVGYMYWTDWGEIPKIERAAL 465 (619)
T ss_dssp SCEEEECTT---CCSEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred eEEEEEECC---CCCeeeEEEEcCCCcEEEecCCCCCEEEEEcc
Confidence 666655422 3445566554 57888776543 56666543
No 97
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=62.06 E-value=39 Score=23.94 Aligned_cols=29 Identities=17% Similarity=0.190 Sum_probs=18.1
Q ss_pred CCceeEeeeCCc--CCCceeecCCCC-EEEEe
Q 042294 10 TGTVELVANLPG--FPDNVRINERGQ-FWVAI 38 (131)
Q Consensus 10 ~G~~e~f~~LPG--~PDNI~~~~~G~-~Wval 38 (131)
.|+...-+.+++ .|-.+..+++|+ +|++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~ 61 (349)
T 1jmx_B 30 SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN 61 (349)
T ss_dssp TTEEEEEEECSSCCSSCEEEECTTSSEEEEEE
T ss_pred CCcEEEEEecCCCCCCceeEECCCCCEEEEEe
Confidence 343333335565 688899999997 45553
No 98
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=59.47 E-value=62 Score=25.34 Aligned_cols=53 Identities=8% Similarity=0.046 Sum_probs=35.4
Q ss_pred eEEEEEEc-CCCeEEEEEECCCCCc-----ccceEEEEEeCCEEEEecCC-CCeEEEeeC
Q 042294 78 YTVISLFN-ENGEILEVLEDPRGVV-----MKLVSEVKEAQGKLWIGTVA-HNHIATLPY 130 (131)
Q Consensus 78 ~~~v~~v~-~~G~i~~~l~d~~g~~-----~~~is~v~~~~g~LylGS~~-~~~i~~~~l 130 (131)
...|..+| ..++++..+.-+.|+. .+.--.+...|.+||+.+.. .+.|.++++
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~ 167 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDL 167 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEEC
Confidence 35677888 4688999887654321 23333444457889999875 788888875
No 99
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=50.35 E-value=84 Score=24.15 Aligned_cols=80 Identities=11% Similarity=-0.034 Sum_probs=45.6
Q ss_pred eCCcCCCceeecCCCC-EEEEeec-CCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEc-CCCeEEEEE
Q 042294 18 NLPGFPDNVRINERGQ-FWVAIDC-CRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFN-ENGEILEVL 94 (131)
Q Consensus 18 ~LPG~PDNI~~~~~G~-~Wval~~-~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~-~~G~i~~~l 94 (131)
..+..| +|..++||. +||+-.. .|. ...+....|..+| ..++++..+
T Consensus 63 ~vG~~P-~i~~spDg~~lyVan~~~~r~-----------------------------~~G~~~~~VsviD~~T~~vv~~I 112 (368)
T 1mda_H 63 LGAFLS-LAVAGHSGSDFALASTSFARS-----------------------------AKGKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp EECTTC-EEEECTTSSCEEEEEEEETTT-----------------------------TSSSEEEEEEEECTTTCCEEEEE
T ss_pred eCCCCC-ceEECCCCCEEEEEccccccc-----------------------------ccCCCCCEEEEEECCCCCEEEEE
Confidence 455778 999999984 7988642 111 0012345577777 457888877
Q ss_pred ECCCCC-----cccceEEEEEeCCEEEEecCC-CCeEEE
Q 042294 95 EDPRGV-----VMKLVSEVKEAQGKLWIGTVA-HNHIAT 127 (131)
Q Consensus 95 ~d~~g~-----~~~~is~v~~~~g~LylGS~~-~~~i~~ 127 (131)
.-+.+. ..+.--.+...+.+||+.+.. ++.+.+
T Consensus 113 ~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V 151 (368)
T 1mda_H 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGL 151 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEE
T ss_pred ECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEE
Confidence 643111 112333333345678877764 455555
No 100
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=50.17 E-value=34 Score=25.70 Aligned_cols=46 Identities=9% Similarity=0.003 Sum_probs=28.6
Q ss_pred EEEEc-CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 81 ISLFN-ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 81 v~~v~-~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
+.++| .+|++++.+ -+. . .+..++...+++||.....++-+.+++.
T Consensus 77 v~~iD~~Tgkv~~~~-l~~-~--~FgeGit~~g~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLG-N--IFAEGLASDGERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp EEECCSSCSSCSEEE-ECT-T--CCEEEEEECSSCEEEEESSSCEEEEEET
T ss_pred EEEEECCCCcEEeEE-CCC-C--cceeEEEEeCCEEEEEEccCCEEEEEEC
Confidence 56666 457777776 222 2 2334556667788887777777777663
No 101
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=49.70 E-value=66 Score=22.74 Aligned_cols=20 Identities=15% Similarity=0.454 Sum_probs=14.8
Q ss_pred eCCcCCCceeecCCCC-EEEE
Q 042294 18 NLPGFPDNVRINERGQ-FWVA 37 (131)
Q Consensus 18 ~LPG~PDNI~~~~~G~-~Wva 37 (131)
...+.|..+.++++|. +|++
T Consensus 218 ~~~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 218 GTNNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEEE
T ss_pred cCCCCCceEEECCCCCEEEEE
Confidence 3456788999999998 4554
No 102
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=44.24 E-value=80 Score=22.13 Aligned_cols=31 Identities=29% Similarity=0.613 Sum_probs=20.7
Q ss_pred CCCCceeEee--eCCcCCCceeecCCCC-EEEEe
Q 042294 8 PKTGTVELVA--NLPGFPDNVRINERGQ-FWVAI 38 (131)
Q Consensus 8 ~k~G~~e~f~--~LPG~PDNI~~~~~G~-~Wval 38 (131)
+..|+.+.+. ..++.|..+..+++|. ++++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 102 (343)
T 1ri6_A 69 PDDGALTFAAESALPGSLTHISTDHQGQFVFVGS 102 (343)
T ss_dssp TTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEE
T ss_pred CCCCceeeccccccCCCCcEEEEcCCCCEEEEEe
Confidence 3456655553 4567889999999998 44543
No 103
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=43.14 E-value=1e+02 Score=22.95 Aligned_cols=53 Identities=8% Similarity=0.105 Sum_probs=31.3
Q ss_pred eEEEEEEcC-CCeEEEEEECCCCCc--ccceEEEEE--eCCEEEEecCC-CCeEEEeeC
Q 042294 78 YTVISLFNE-NGEILEVLEDPRGVV--MKLVSEVKE--AQGKLWIGTVA-HNHIATLPY 130 (131)
Q Consensus 78 ~~~v~~v~~-~G~i~~~l~d~~g~~--~~~is~v~~--~~g~LylGS~~-~~~i~~~~l 130 (131)
...|..+|. .++++..+.-+.+.. -.....+.. .+.+||.++.. .+.|.++++
T Consensus 80 ~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~ 138 (361)
T 2oiz_A 80 SDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDV 138 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEET
T ss_pred CCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEEC
Confidence 345666774 578888876432110 012233333 46789998875 677887764
No 104
>2jrb_A ORF 1 protein; RNA binding protein; NMR {Mus musculus}
Probab=42.55 E-value=24 Score=22.18 Aligned_cols=39 Identities=26% Similarity=0.269 Sum_probs=31.4
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHh
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFR 61 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~ 61 (131)
+||--+++.-+|.+|. ..--..+.+++.+.|.+..++..
T Consensus 44 lYPakLsf~~eGeiks--F~dkqkl~efitk~p~lqe~lk~ 82 (88)
T 2jrb_A 44 LYPAKLSITIDGETKV--FHDKTKFTQYLSTNPALQRIITE 82 (88)
T ss_dssp ETTTEEEEESSSCEEE--ESSHHHHHHHHHTCHHHHHHC--
T ss_pred ccceeeEEEECCeEec--cCCHHHHHHHHhcChHHHHHHHh
Confidence 7999999999999998 44446788999999999887654
No 105
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=42.22 E-value=88 Score=22.04 Aligned_cols=30 Identities=10% Similarity=0.063 Sum_probs=18.0
Q ss_pred CCceeEeeeCCcCCCceeecCCCC-EEEEee
Q 042294 10 TGTVELVANLPGFPDNVRINERGQ-FWVAID 39 (131)
Q Consensus 10 ~G~~e~f~~LPG~PDNI~~~~~G~-~Wval~ 39 (131)
.|+..........|..+..+++|+ ++++..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 117 KNKFISTIPIPYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp TTEEEEEEECCTTEEEEEECTTSSCEEEEEE
T ss_pred CCCeEEEEECCCCccceEECCCCCEEEEEec
Confidence 343333334456678889999997 555433
No 106
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=41.38 E-value=95 Score=22.20 Aligned_cols=32 Identities=6% Similarity=0.069 Sum_probs=21.6
Q ss_pred CCCCceeEee--eCCcCCCceeecCCCCEEEEee
Q 042294 8 PKTGTVELVA--NLPGFPDNVRINERGQFWVAID 39 (131)
Q Consensus 8 ~k~G~~e~f~--~LPG~PDNI~~~~~G~~Wval~ 39 (131)
++.|+.+.+. .-.+.|-.+..+++|.++++-.
T Consensus 25 ~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~ 58 (347)
T 3hfq_A 25 TTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDK 58 (347)
T ss_dssp TTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEE
T ss_pred CCCCeEEEeeeeeccCCcceEEEccCCeEEEEEe
Confidence 4567666543 2336788999999999666543
No 107
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=39.77 E-value=1e+02 Score=22.18 Aligned_cols=44 Identities=16% Similarity=0.111 Sum_probs=22.8
Q ss_pred EEEEEc-CCCe--EEEEEECCCCCcccceEEEEEe--CCEEEEecCCCCeEEEe
Q 042294 80 VISLFN-ENGE--ILEVLEDPRGVVMKLVSEVKEA--QGKLWIGTVAHNHIATL 128 (131)
Q Consensus 80 ~v~~v~-~~G~--i~~~l~d~~g~~~~~is~v~~~--~g~LylGS~~~~~i~~~ 128 (131)
.++.++ .+|+ .+..+.. |. .+.++... +.+||.++-....|.++
T Consensus 285 ~v~~~~~~~g~~~~~~~~~~--g~---~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 285 AIFKVDETNGTLTKVGYQLT--GI---HPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp EEEEECTTTCCEEEEEEEEC--SS---CCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred EEEEEcCCCCcEEEeeEecC--CC---CCceEEECCCCCEEEEEECCCCCEEEE
Confidence 355565 3455 3333332 22 33455553 45677777666666664
No 108
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=39.23 E-value=14 Score=28.01 Aligned_cols=26 Identities=19% Similarity=0.217 Sum_probs=20.5
Q ss_pred eEee-eCCcCCCceeecCCCCEEEEee
Q 042294 14 ELVA-NLPGFPDNVRINERGQFWVAID 39 (131)
Q Consensus 14 e~f~-~LPG~PDNI~~~~~G~~Wval~ 39 (131)
+.|. +..+-|.+|..++||.+||+..
T Consensus 315 ~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 315 GRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp EEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred EEcccCCCCceeEEEECCCCcEEEEEe
Confidence 3444 5567899999999999999754
No 109
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=38.96 E-value=89 Score=25.45 Aligned_cols=43 Identities=19% Similarity=0.329 Sum_probs=29.6
Q ss_pred eEEEEEEc-CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCC
Q 042294 78 YTVISLFN-ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAH 122 (131)
Q Consensus 78 ~~~v~~v~-~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~ 122 (131)
.+.+.++| .+|+++-.++.+.|...+-+ +.+.+|++|++....
T Consensus 506 dg~l~A~D~~tG~~lW~~~~~~g~~a~P~--~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 506 DGYFKAFDAKSGKELWKFQTGSGIVSPPI--TWEQDGEQYLGVTVG 549 (582)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEEC
T ss_pred CCcEEEEECCCCCEEEEecCCCCcccCce--EEEECCEEEEEEEcc
Confidence 35677888 57999999998765432222 225899999986543
No 110
>3f62_A Interleukin 18 binding protein; immunoglobulin, IL-18, beta trefoil, cytokine, secreted; 2.00A {Ectromelia virus}
Probab=38.67 E-value=18 Score=23.60 Aligned_cols=24 Identities=21% Similarity=0.419 Sum_probs=18.0
Q ss_pred eeeeCC-CCCceeEee-eCCcCCCceeec
Q 042294 3 YWLEGP-KTGTVELVA-NLPGFPDNVRIN 29 (131)
Q Consensus 3 ywl~G~-k~G~~e~f~-~LPG~PDNI~~~ 29 (131)
|||.+. +..+...|+ +||| .|+-+
T Consensus 36 YWL~ng~~~~~~~sFiEhLp~---~l~E~ 61 (109)
T 3f62_A 36 YWLAKDMKSDEDTKFIEHLGD---GINED 61 (109)
T ss_dssp EEEEEETTSCCCCEEGGGSCT---TEEEC
T ss_pred EEEeCCcccccccchhhhCCC---ccccc
Confidence 899876 677777899 8886 66644
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=33.16 E-value=1.4e+02 Score=21.85 Aligned_cols=20 Identities=15% Similarity=0.212 Sum_probs=11.9
Q ss_pred CCcCCCceeecCCCCEEEEe
Q 042294 19 LPGFPDNVRINERGQFWVAI 38 (131)
Q Consensus 19 LPG~PDNI~~~~~G~~Wval 38 (131)
.++.|-.+..++++.++++.
T Consensus 121 ~~~~~~~~~~s~~~~~~~~~ 140 (433)
T 3bws_A 121 TGFQPKSVRFIDNTRLAIPL 140 (433)
T ss_dssp CSSCBCCCEESSSSEEEEEB
T ss_pred CCCCceEEEEeCCCeEEEEe
Confidence 44555567777755666554
No 112
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=32.70 E-value=96 Score=22.70 Aligned_cols=43 Identities=21% Similarity=0.219 Sum_probs=29.8
Q ss_pred eEEEEEEc-CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCC
Q 042294 78 YTVISLFN-ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHN 123 (131)
Q Consensus 78 ~~~v~~v~-~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~ 123 (131)
.+.+..+| .+|+++..++...+. ..+.....+++||+++-...
T Consensus 327 ~g~l~~~d~~tG~~~~~~~~~~~~---~~~~~~~~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 327 EGYLHWINVEDGRFVAQQKVDSSG---FQTEPVAADGKLLIQAKDGT 370 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCTTC---BCSCCEEETTEEEEEBTTSC
T ss_pred CCeEEEEECCCCcEEEEEecCCCc---ceeCCEEECCEEEEEeCCCE
Confidence 35677888 679998888764333 23445557999999987644
No 113
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=32.49 E-value=1.4e+02 Score=21.48 Aligned_cols=90 Identities=10% Similarity=0.075 Sum_probs=49.5
Q ss_pred CCCCceeEee-eCCcCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcC
Q 042294 8 PKTGTVELVA-NLPGFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNE 86 (131)
Q Consensus 8 ~k~G~~e~f~-~LPG~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~ 86 (131)
++.|+.+... .-...|-.+..+++|.+..+.... . .......+..++.
T Consensus 36 ~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~-~------------------------------~~~~~v~~~~~~~ 84 (361)
T 3scy_A 36 EETGESLPLSDAEVANPSYLIPSADGKFVYSVNEF-S------------------------------KDQAAVSAFAFDK 84 (361)
T ss_dssp TTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECC-S------------------------------STTCEEEEEEEET
T ss_pred CCCCCEEEeecccCCCCceEEECCCCCEEEEEEcc-C------------------------------CCCCcEEEEEEeC
Confidence 4556665544 223467788999999854443321 0 0011233567776
Q ss_pred C-CeEEEEEECCCCCcccceEEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 87 N-GEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 87 ~-G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
+ |+....-..+.+. .....+...+.+||.++.....|.++++
T Consensus 85 ~~g~~~~~~~~~~~~--~~p~~~~~dg~~l~~~~~~~~~v~~~~~ 127 (361)
T 3scy_A 85 EKGTLHLLNTQKTMG--ADPCYLTTNGKNIVTANYSGGSITVFPI 127 (361)
T ss_dssp TTTEEEEEEEEECSS--SCEEEEEECSSEEEEEETTTTEEEEEEB
T ss_pred CCCcEEEeeEeccCC--CCcEEEEECCCEEEEEECCCCEEEEEEe
Confidence 5 7643332222111 1334444466779999888887877764
No 114
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=31.72 E-value=1.5e+02 Score=21.63 Aligned_cols=50 Identities=16% Similarity=0.242 Sum_probs=30.7
Q ss_pred EEEEEEcC-CCeEEEEEECCCCC------cccceEEEEEeCCEEEEecCCCCeEEEee
Q 042294 79 TVISLFNE-NGEILEVLEDPRGV------VMKLVSEVKEAQGKLWIGTVAHNHIATLP 129 (131)
Q Consensus 79 ~~v~~v~~-~G~i~~~l~d~~g~------~~~~is~v~~~~g~LylGS~~~~~i~~~~ 129 (131)
+.+.++|. +|+++-.++.+... .....+.....++++|+++.. ..|-.++
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-g~l~a~d 119 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-AQVYALN 119 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-SEEEEEE
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-CEEEEEE
Confidence 45888885 69988777653211 112345666788999999854 3444433
No 115
>2nnc_A Sulfur covalently-binding protein; sulfur binding protein, SOXY, beta sandwich, green sulfur BA ligand binding protein; 2.14A {Chlorobium limicola} PDB: 2nnf_A
Probab=30.63 E-value=1.2e+02 Score=20.02 Aligned_cols=44 Identities=14% Similarity=-0.087 Sum_probs=27.9
Q ss_pred cceEEEEEEcCCCeEEEEEECCCCCcccceEEEEEeCCEEEEecC
Q 042294 76 KMYTVISLFNENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTV 120 (131)
Q Consensus 76 ~~~~~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~ 120 (131)
.|....+.+.+.|+.--+.+-.=++ .+.|..+.+.||++|+++-
T Consensus 70 ~P~~a~f~~~p~~~~~~stRirm~~-ts~V~Ava~~dG~~~~a~~ 113 (124)
T 2nnc_A 70 SPMVASFDVLPRMKPEVSLRMRMAK-TENLVVVVQAGGKLYRAVR 113 (124)
T ss_dssp SCEEEEEEECTTSCCEEEEEEECCS-SEEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEECCCCceeEEEEEEeCC-CccEEEEEEeCCEEEEEEE
Confidence 4556667776666654443322222 3577788888999998864
No 116
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=30.31 E-value=1.8e+02 Score=22.23 Aligned_cols=43 Identities=14% Similarity=0.163 Sum_probs=31.8
Q ss_pred eEEEEEEcCCCeEEEEEECCCCCcccceEEEEE-eCCEEEEecC
Q 042294 78 YTVISLFNENGEILEVLEDPRGVVMKLVSEVKE-AQGKLWIGTV 120 (131)
Q Consensus 78 ~~~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~-~~g~LylGS~ 120 (131)
..-+++++.+++....+....|..+...-.+.. .+|.+|+++.
T Consensus 140 ~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 140 TVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp EEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEES
T ss_pred eEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCC
Confidence 344888998888777766666666767777766 5799999975
No 117
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=28.35 E-value=2.4e+02 Score=22.84 Aligned_cols=43 Identities=7% Similarity=0.057 Sum_probs=25.3
Q ss_pred EEEEEcCCCeEEEEEECCCCCcccceEEEEE---------eCCEEEEecCCC
Q 042294 80 VISLFNENGEILEVLEDPRGVVMKLVSEVKE---------AQGKLWIGTVAH 122 (131)
Q Consensus 80 ~v~~v~~~G~i~~~l~d~~g~~~~~is~v~~---------~~g~LylGS~~~ 122 (131)
.+.++|.+++.+..+-......+.....+.. .+++||+.....
T Consensus 163 ~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 163 AIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred eEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 3777887665555554322112344566655 345699887775
No 118
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=27.66 E-value=1.1e+02 Score=24.79 Aligned_cols=42 Identities=19% Similarity=0.285 Sum_probs=28.6
Q ss_pred EEEEEEc-CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCC
Q 042294 79 TVISLFN-ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAH 122 (131)
Q Consensus 79 ~~v~~v~-~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~ 122 (131)
+.+..+| .+|+++-.++.+.+..-.. .+...+|++|+++...
T Consensus 485 g~l~a~D~~tG~~lw~~~~~~~~~~~p--~~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 485 GYLKALDNKDGKELWNFKMPSGGIGSP--MTYSFKGKQYIGSMYG 527 (571)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEeCCCCcEeee--EEEEECCEEEEEEECC
Confidence 5677788 5799999998765432222 2235899999987543
No 119
>2xet_A CAF1A usher, F1 capsule-anchoring protein; transport protein; 1.60A {Yersinia pestis}
Probab=27.41 E-value=84 Score=18.96 Aligned_cols=14 Identities=0% Similarity=0.214 Sum_probs=7.9
Q ss_pred EeCCEEEEecCCCC
Q 042294 110 EAQGKLWIGTVAHN 123 (131)
Q Consensus 110 ~~~g~LylGS~~~~ 123 (131)
-.+|.+||..+...
T Consensus 35 g~~G~vyl~g~~~~ 48 (89)
T 2xet_A 35 GDNSGVYLTGLPKK 48 (89)
T ss_dssp CTTSEEEEEEECSE
T ss_pred cCCCEEEEECCCCC
Confidence 34566777655443
No 120
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=26.92 E-value=1.5e+02 Score=19.93 Aligned_cols=34 Identities=12% Similarity=0.135 Sum_probs=18.6
Q ss_pred eeeeCCCCCceeEeeeCCcCCCceeecCCCCEEE
Q 042294 3 YWLEGPKTGTVELVANLPGFPDNVRINERGQFWV 36 (131)
Q Consensus 3 ywl~G~k~G~~e~f~~LPG~PDNI~~~~~G~~Wv 36 (131)
.|.--...++...+...++.+..+..+++|.+.+
T Consensus 155 l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 188 (297)
T 2ojh_A 155 IYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIY 188 (297)
T ss_dssp EEEEETTTCCEEECCCSSSCEEEEEECTTSSEEE
T ss_pred EEEEECCCCcceEcccCCCccccceECCCCCEEE
Confidence 3443333444444444455566777888887533
No 121
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=25.90 E-value=2.1e+02 Score=21.48 Aligned_cols=69 Identities=9% Similarity=0.068 Sum_probs=0.0
Q ss_pred CCc---eeecCCC-CEEEEee---------cCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEc-CCC
Q 042294 23 PDN---VRINERG-QFWVAID---------CCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFN-ENG 88 (131)
Q Consensus 23 PDN---I~~~~~G-~~Wval~---------~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~-~~G 88 (131)
|++ +..+++| .+||+.. .. .-|..+| ..+
T Consensus 266 p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~-------------------------------------~~V~VID~~t~ 308 (373)
T 2mad_H 266 PGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAA-------------------------------------KEVTSVTGLVG 308 (373)
T ss_pred cCceEeEEECCCCCEEEEEeccCCcccccCCC-------------------------------------CeEEEEECCCC
Q ss_pred eEEEEEECCCCCcccceEEEEEeCC-EEEEecCCCCeEEEeeCC
Q 042294 89 EILEVLEDPRGVVMKLVSEVKEAQG-KLWIGTVAHNHIATLPYP 131 (131)
Q Consensus 89 ~i~~~l~d~~g~~~~~is~v~~~~g-~LylGS~~~~~i~~~~l~ 131 (131)
++++.+.-.. .+.--.+...+. .||.++...+.|.++++.
T Consensus 309 ~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 309 QTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred EEEEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECC
No 122
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=25.53 E-value=2.4e+02 Score=21.98 Aligned_cols=70 Identities=17% Similarity=0.280 Sum_probs=0.0
Q ss_pred CCceeEeeeCCcCCCceee---cCCCCEEEEeecCCchHHHHhhcCHHHHHHHHhcChhhhhhhhhcCCcceEEEEEEcC
Q 042294 10 TGTVELVANLPGFPDNVRI---NERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFRLPIRMSFLARVMGMKMYTVISLFNE 86 (131)
Q Consensus 10 ~G~~e~f~~LPG~PDNI~~---~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~lp~~~~~~~~~~~~~~~~~v~~v~~ 86 (131)
+...+.+.+-+...|.+.. +++|.++.+.... ..|.+.+.
T Consensus 262 ~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~-------------------------------------~aI~~w~~ 304 (381)
T 3q6k_A 262 KLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANT-------------------------------------KQVSCWNT 304 (381)
T ss_dssp CCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSS-------------------------------------SEEEEEET
T ss_pred hhceEEeeecCCCCCcceEEEeCCCCeEEEEeccC-------------------------------------CeEEEEeC
Q ss_pred CC------eEEEEEECCCCCcccceEEEEE-eCCEEEEec
Q 042294 87 NG------EILEVLEDPRGVVMKLVSEVKE-AQGKLWIGT 119 (131)
Q Consensus 87 ~G------~i~~~l~d~~g~~~~~is~v~~-~~g~LylGS 119 (131)
++ +.....+|+. +...+++.. .+|+||+-|
T Consensus 305 ~~~~~~~~n~~~l~~d~~---l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 305 QKMPLRMKNTDVVYTSSR---FVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp TSCSBCGGGEEEEEECTT---CCSEEEEEECTTSCEEEEE
T ss_pred CCCccccCceEEEEECCC---ccccCeEEECCCCeEEEEE
No 123
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=25.19 E-value=1.7e+02 Score=20.21 Aligned_cols=29 Identities=14% Similarity=0.222 Sum_probs=18.9
Q ss_pred CCceeEeeeCCc---CCCceeecCCCC-EEEEe
Q 042294 10 TGTVELVANLPG---FPDNVRINERGQ-FWVAI 38 (131)
Q Consensus 10 ~G~~e~f~~LPG---~PDNI~~~~~G~-~Wval 38 (131)
.|+....+.+++ -|..+..+++|. ++++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~ 52 (337)
T 1pby_B 20 KMAVDKVITIADAGPTPMVPMVAPGGRIAYATV 52 (337)
T ss_dssp TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE
T ss_pred CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEe
Confidence 343333345666 699999999996 55543
No 124
>3soo_A LINE-1 type transposase domain-containing protein; alpha/beta protein, structural genomics, joint center for ST genomics, JCSG; 2.73A {Homo sapiens} PDB: 2lr6_A
Probab=25.14 E-value=53 Score=20.58 Aligned_cols=39 Identities=5% Similarity=-0.055 Sum_probs=32.5
Q ss_pred cCCCceeecCCCCEEEEeecCCchHHHHhhcCHHHHHHHHh
Q 042294 21 GFPDNVRINERGQFWVAIDCCRTAAQEVLSHNPWIRSIYFR 61 (131)
Q Consensus 21 G~PDNI~~~~~G~~Wval~~~r~~~~~~l~~~P~lRk~~~~ 61 (131)
+||--+++.-+|.+|. ..--..+.+++.+.|.+..++..
T Consensus 44 lYPakLsf~~eGeiks--F~dkqkl~eFi~~~p~lqe~lk~ 82 (88)
T 3soo_A 44 LCEVXLAFXCDGEIXT--FSDLQSLRXFASQXSSMXELLXD 82 (88)
T ss_dssp CCCCCEEEECSSSEEE--ESSHHHHHHHHHTCHHHHTTSTT
T ss_pred cccceEEEEecCceec--cCCHHHccchhccCccHHHHHHh
Confidence 6999999999999998 44445788999999999888764
No 125
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=24.74 E-value=1.3e+02 Score=24.74 Aligned_cols=43 Identities=12% Similarity=0.210 Sum_probs=29.6
Q ss_pred eEEEEEEc-CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecCCC
Q 042294 78 YTVISLFN-ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTVAH 122 (131)
Q Consensus 78 ~~~v~~v~-~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~~~ 122 (131)
.+.+.++| .+|+++-.++-+.|....-++ .+.+|++|++....
T Consensus 493 dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~--y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 493 DGYLKARDSDTGDLLWKFKIPSGAIGYPMT--YTHKGTQYVAIYYG 536 (599)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCEE--EEETTEEEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEeeCCCCcEeccEE--EEeCCEEEEEEEcc
Confidence 35677788 579999999887655333222 35899999986543
No 126
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=24.44 E-value=97 Score=19.80 Aligned_cols=6 Identities=17% Similarity=0.246 Sum_probs=2.4
Q ss_pred CCeEEE
Q 042294 87 NGEILE 92 (131)
Q Consensus 87 ~G~i~~ 92 (131)
||+|.+
T Consensus 117 dGkI~~ 122 (134)
T 3dmc_A 117 GDKICS 122 (134)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 344433
No 127
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=23.87 E-value=1.1e+02 Score=18.90 Aligned_cols=20 Identities=15% Similarity=0.353 Sum_probs=13.0
Q ss_pred EEEEEeCCEEEEecCCCCeE
Q 042294 106 SEVKEAQGKLWIGTVAHNHI 125 (131)
Q Consensus 106 s~v~~~~g~LylGS~~~~~i 125 (131)
++++-.+|.+||..+...--
T Consensus 36 ~giVG~~G~vyl~gl~~~g~ 55 (94)
T 3l48_A 36 LGMVADEGLAWLSGVTPGET 55 (94)
T ss_dssp EEEBCGGGEEEESSCCTTCE
T ss_pred EEEECCCCEEEEECCCCCCE
Confidence 34445678889887765543
No 128
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=23.44 E-value=2e+02 Score=23.76 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=27.9
Q ss_pred eEEEEEEc-CCCeEEEEEECCCCCcccceEEEEEeCCEEEEec
Q 042294 78 YTVISLFN-ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGT 119 (131)
Q Consensus 78 ~~~v~~v~-~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS 119 (131)
.+.+..+| .+|+++.+++-+.|.....+| .+.+|+.|+..
T Consensus 497 dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~--y~~~G~~~v~~ 537 (677)
T 1kb0_A 497 DGRLVAYHAATGEKLWEAPTGTGVVAAPST--YMVDGRQYVSV 537 (677)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCEE--EEETTEEEEEE
T ss_pred CCcEEEEECCCCceeeeeeCCCCcccCCEE--EEeCCEEEEEE
Confidence 45677788 579999999987654332222 25889999875
No 129
>2i46_A Adrenocortical dysplasia protein homolog; TPP1, OB fold, POT1 binding, protein binding; 2.70A {Homo sapiens}
Probab=22.79 E-value=59 Score=22.26 Aligned_cols=11 Identities=36% Similarity=0.969 Sum_probs=9.4
Q ss_pred CHHHHHHHHhc
Q 042294 52 NPWIRSIYFRL 62 (131)
Q Consensus 52 ~P~lRk~~~~l 62 (131)
+||+|.++.+.
T Consensus 7 rPWIreL~lg~ 17 (161)
T 2i46_A 7 RPWIRELILGS 17 (161)
T ss_dssp CCCHHHHHHSS
T ss_pred cHHHHHHHhcc
Confidence 69999999874
No 130
>2oxg_Y SOXY protein; immunoglobulin-like beta-sandwich fold, transport protein; 1.40A {Paracoccus denitrificans} PDB: 2oxh_Y* 2ox5_Y*
Probab=21.38 E-value=1.8e+02 Score=19.12 Aligned_cols=44 Identities=7% Similarity=-0.051 Sum_probs=26.8
Q ss_pred cceEEEEEEcC-CCeEEEEEECCCCCcccceEEEEEe-CCEEEEecC
Q 042294 76 KMYTVISLFNE-NGEILEVLEDPRGVVMKLVSEVKEA-QGKLWIGTV 120 (131)
Q Consensus 76 ~~~~~v~~v~~-~G~i~~~l~d~~g~~~~~is~v~~~-~g~LylGS~ 120 (131)
.|....+.+.+ .|+.--+..-.=++ .+.|..+.+. ||++|+++-
T Consensus 68 ~P~va~F~~~p~~~~~~~stRIRm~~-ts~V~Avae~~dG~~~~a~~ 113 (124)
T 2oxg_Y 68 EPAVATFNFGPAAADQRAATRIRLAQ-TQDVIALAKMADGSVVKAQT 113 (124)
T ss_dssp SCEEEEEEECTTEEEEEEEEEECCSS-SEEEEEEEEETTSCEEEEEE
T ss_pred CCEEEEEEeCCcccceeEEEEEEeCC-CccEEEEEEeCCCeEEEEEE
Confidence 34455555566 56655554433322 3677788886 889998764
No 131
>1zps_A PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidine biosynthesis; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.168.1.1
Probab=20.93 E-value=50 Score=22.48 Aligned_cols=17 Identities=41% Similarity=0.876 Sum_probs=15.0
Q ss_pred eeeeeCCCCCceeEeee
Q 042294 2 KYWLEGPKTGTVELVAN 18 (131)
Q Consensus 2 rywl~G~k~G~~e~f~~ 18 (131)
|+|.||+..|....+.+
T Consensus 65 ~LW~KGetSG~~Q~v~~ 81 (138)
T 1zps_A 65 KLWLKGESSGHVQRVKD 81 (138)
T ss_dssp EEEETTTTTSCCEEEEE
T ss_pred ccccCccCCCCcEEEEE
Confidence 79999999999888765
No 132
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=20.82 E-value=1.7e+02 Score=24.23 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=28.4
Q ss_pred eEEEEEEc-CCCeEEEEEECCCCCcccceEEEEEeCCEEEEecC
Q 042294 78 YTVISLFN-ENGEILEVLEDPRGVVMKLVSEVKEAQGKLWIGTV 120 (131)
Q Consensus 78 ~~~v~~v~-~~G~i~~~l~d~~g~~~~~is~v~~~~g~LylGS~ 120 (131)
.+.+.++| .+|+++-.++-+.|....-+| .+.+|+.|+...
T Consensus 495 dg~l~a~D~~tG~~lw~~~~~~~~~~~p~t--y~~~G~qyv~~~ 536 (689)
T 1yiq_A 495 DGRVIAYAADTGEKLWEQPAASGVMAAPVT--YSVDGEQYVTFM 536 (689)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCEE--EEETTEEEEEEE
T ss_pred CCcEEEEECCCCccceeeeCCCCcccCceE--EEECCEEEEEEE
Confidence 35677788 579999999887655333322 258999998754
No 133
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=20.67 E-value=2.6e+02 Score=20.56 Aligned_cols=25 Identities=4% Similarity=0.038 Sum_probs=19.6
Q ss_pred EEEEEeCCEEEEecCCCCeEEEeeC
Q 042294 106 SEVKEAQGKLWIGTVAHNHIATLPY 130 (131)
Q Consensus 106 s~v~~~~g~LylGS~~~~~i~~~~l 130 (131)
..+...++++|........|.++++
T Consensus 267 ~~i~i~~d~Iy~td~~~~~i~~~~~ 291 (302)
T 3s25_A 267 CNINVTSQYVYFTDFVSNKEYCTST 291 (302)
T ss_dssp EEEEECSSEEEEEETTTCCEEEEES
T ss_pred ceEEEeCCEEEEEECCCCeEEEEEC
Confidence 3566788999999888777887765
Done!