Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>042298
MSLCCAQAATGKVFLDERTKLSATTLNKNNNVKREDDTRVTSLSFGISEAAGGLRNGKCN
FSPRPRPLLCRISQLEVADLAPSTSAAYGILLLLGGLFAFAKSASKGSLFGGLTGAALMA
SAFFLMQSPDTKAIGDALGFGSAFLFSSVFGIRLVATQRPIPAGPLLGLSTCALAVFISA
YLQDSP

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042298
        (186 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006165 - symbol:AT1G33265 "AT1G33265" speci...   325  2.7e-29   1


>TAIR|locus:505006165 [details] [associations]
            symbol:AT1G33265 "AT1G33265" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0016020 "membrane" evidence=IEA]
            InterPro:IPR005349 Pfam:PF03647 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0016301 PANTHER:PTHR12668
            UniGene:At.39970 UniGene:At.48259 EMBL:AY099870 EMBL:BT000332
            IPI:IPI00526652 RefSeq:NP_564422.1 PaxDb:Q8LPG1 PRIDE:Q8LPG1
            EnsemblPlants:AT1G33265.1 GeneID:840221 KEGG:ath:AT1G33265
            TAIR:At1g33265 eggNOG:NOG283170 InParanoid:Q8LPG1 OMA:SATCISK
            ProtClustDB:CLSN2688234 ArrayExpress:Q8LPG1 Genevestigator:Q8LPG1
            Uniprot:Q8LPG1
        Length = 177

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 73/152 (48%), Positives = 97/152 (63%)

Query:    40 VTSLSFGISEAAGGLRN--GKCNFSPRPRPL----LCRISQLEVADLAPSTSAAYGIXXX 93
             V S   G S + GG RN  G    S + +      LC   + E+++LAP  SA YG+   
Sbjct:    16 VRSTKLGRSVSNGG-RNWSGLTKLSEKSKTKRGNGLC--CKAELSELAPVVSATYGVLLL 72

Query:    94 XXXXXXXXKSASKGSLFGGLTGAALMASAFFLMQSPDTKAIGDALGFGSAFLFSSVFGIR 153
                     KS SKGSLFGGLTG+ LMASA+FL +SP+T+ +GD +G G+AFLFSSVFG R
Sbjct:    73 GGGLFAYSKSGSKGSLFGGLTGSVLMASAYFLTKSPETRVLGDTIGLGAAFLFSSVFGFR 132

Query:   154 LVATQRPIPAGPLLGLSTCALAVFISAYLQDS 185
             L ++++P+PAGPLL LS   L+ F+ AY+ DS
Sbjct:   133 LASSRKPVPAGPLLLLSIGMLSFFVMAYMHDS 164


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      186       175   0.00078  109 3  11 22  0.39    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  512 (54 KB)
  Total size of DFA:  113 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.03u 0.16s 14.19t   Elapsed:  00:00:01
  Total cpu time:  14.03u 0.16s 14.19t   Elapsed:  00:00:01
  Start:  Fri May 10 02:10:29 2013   End:  Fri May 10 02:10:30 2013

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