BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042300
(520 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1
Length = 412
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 373 SVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILP-FATSSEAVSALIFASR 431
S+++L + T+ ++C+D LV ++D NI FV +ILP ++E V+A++ + R
Sbjct: 265 SIAMLAIVTVFVSLCADYLVGSIDQLVEEVNISKTFVGLVILPVVGNAAEHVTAIVVSYR 324
Query: 432 KR 433
+
Sbjct: 325 GQ 326
>sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica
GN=CAX3 PE=2 SV=2
Length = 417
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 373 SVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPF-ATSSEAVSALIFASR 431
S++ L M T+ ++ S+ LV+A++ S + N+P F++ I+LP ++E SA++FA +
Sbjct: 264 SIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMK 323
Query: 432 KR 433
+
Sbjct: 324 DK 325
>sp|P23286|CALM_CANAX Calmodulin OS=Candida albicans GN=CMD1 PE=3 SV=2
Length = 149
Score = 35.8 bits (81), Expect = 0.81, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 301 IQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKK 343
I + F + D N DG +SA ELR L+ I + D ++D+++K+
Sbjct: 86 IAEAFKVFDRNGDGKISAAELRHLLTSIGEKLSDADVDQMIKE 128
>sp|P07866|LTE1_YEAST Guanine nucleotide exchange factor LTE1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=LTE1 PE=1 SV=2
Length = 1435
Score = 35.8 bits (81), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 31 LSTVVISDGTHDVREPASTQLNNKYLISPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLM 90
L T+ +SD +D+ P++ NNKY SP D G++ + + +
Sbjct: 942 LKTIDLSDSNNDLESPSTHAKNNKYFFSPDD----------------GSIDVASPMKNVE 985
Query: 91 LLAAKLLSNGSEILLQIIG 109
L +K L N SE I G
Sbjct: 986 ELKSKFLKNESETNSNISG 1004
>sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica
GN=CAX2 PE=2 SV=2
Length = 437
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 370 QEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPF-ATSSEAVSALIF 428
Q ++ L + TI ++ S LVDA+ S + N+P F++ I+LP ++E SA++F
Sbjct: 280 QGEAICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMF 339
Query: 429 ASRKR 433
A + +
Sbjct: 340 AMKDK 344
>sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1
Length = 411
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 373 SVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPF-ATSSEAVSALIFASR 431
S+ ILL T++ + C+D LV +DN ++ + F+ I++P ++E V++++ A +
Sbjct: 253 SLVILLGTTVIISFCADFLVGTIDNVVESTGLSKTFIGLIVIPIVGNAAEHVTSVLVAMK 312
Query: 432 KR 433
+
Sbjct: 313 DK 314
>sp|Q84MN0|CML4_ORYSJ Calmodulin-like protein 4 OS=Oryza sativa subsp. japonica GN=CML4
PE=2 SV=1
Length = 154
Score = 34.3 bits (77), Expect = 2.1, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 27/42 (64%)
Query: 302 QKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKK 343
Q+ F + D+N DGC++ +EL A+ + E D +++++++
Sbjct: 13 QEAFLLFDKNGDGCITLEELAAVTRSLGLEPTDQELNDMMRE 54
>sp|O60041|CALM_KLULA Calmodulin OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CMD1 PE=1
SV=1
Length = 147
Score = 34.3 bits (77), Expect = 2.3, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 305 FNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKK 343
F + D+N DG +SA EL+ ++ I + D +DE+L++
Sbjct: 90 FKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLRE 128
>sp|Q9LPK5|CML44_ARATH Probable calcium-binding protein CML44 OS=Arabidopsis thaliana
GN=CML44 PE=2 SV=2
Length = 155
Score = 34.3 bits (77), Expect = 2.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 297 NIDVIQKLFNIIDENADGCLSAKELRALVIGIQFED 332
N + I + FN+ D N DG +SA+ELR ++ + FE+
Sbjct: 86 NDEAIARAFNVFDVNGDGYISAEELRDVLERLGFEE 121
>sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp.
japonica GN=Os02g0138900 PE=3 SV=1
Length = 447
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 391 LVDAVDNFSTASNIPSLFVAFIILP-FATSSEAVSALIFASRKR 433
LVDA+D S A NIP F++ ++LP S+ +A++FA + +
Sbjct: 306 LVDAIDGASKAWNIPVAFISVVLLPVVGNSAGHANAVMFAVKDK 349
>sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2
PE=1 SV=2
Length = 441
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 388 SDPLVDAVDNFSTASNIPSLFVAFIILPF-ATSSEAVSALIFASRKR 433
S LVDA++ S + NIP F++ I+LP ++E A++FA + +
Sbjct: 303 SGYLVDAIEGASVSWNIPIAFISTILLPIVGNAAEHAGAIMFAMKDK 349
>sp|Q866G7|TSCOT_CANFA Thymic stromal cotransporter homolog OS=Canis familiaris GN=SLC46A2
PE=2 SV=1
Length = 481
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 144 NQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGV-----S 198
NQV VG G+ AG T+ + + L L+ +C + TT + + GSG
Sbjct: 322 NQVQVGYGMAAGYTIFITSFL--GVLVFSRC-FQDTTMIMIGMVS----FGSGALLLAFV 374
Query: 199 TDVWTCYAAR-IMVLSIVPFIIVQ--LPQVLNTTSISRVTVLISLIVSISLVIAYSIY-Q 254
+ + Y AR +M+ +++P ++ + +++ +S +V V++ L ++++ V+ ++Y +
Sbjct: 375 KETYMFYIARAVMLFALIPITTIRSAMSKLIKGSSYGKVFVILQLSLTLTGVVTSTVYNK 434
Query: 255 VFQPWIQK 262
++Q ++K
Sbjct: 435 IYQVTMEK 442
>sp|P06787|CALM_YEAST Calmodulin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CMD1 PE=1 SV=1
Length = 147
Score = 32.7 bits (73), Expect = 6.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 305 FNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKK 343
F + D+N DG +SA EL+ ++ I + D +D++L++
Sbjct: 90 FKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLRE 128
>sp|P62184|CALM_RENRE Calmodulin OS=Renilla reniformis PE=1 SV=2
Length = 149
Score = 32.7 bits (73), Expect = 7.0, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 301 IQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKK 343
I++ F + D++ DG +SA ELR ++ + + D +DE++++
Sbjct: 86 IREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
>sp|P02595|CALM_PATSP Calmodulin OS=Patinopecten sp. PE=1 SV=2
Length = 149
Score = 32.7 bits (73), Expect = 7.0, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 301 IQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKK 343
I++ F + D++ DG +SA ELR ++ + + D +DE++++
Sbjct: 86 IREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
>sp|P53440|CALMF_NAEGR Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1 PE=2 SV=1
Length = 155
Score = 32.3 bits (72), Expect = 9.3, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 31/47 (65%)
Query: 297 NIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKK 343
N + I++ F + D++ +G +SA+ELR ++ + + D +DE++++
Sbjct: 88 NEEEIKEAFKVFDKDGNGFISAQELRHVMCNLGEKLTDEEVDEMIRE 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,195,224
Number of Sequences: 539616
Number of extensions: 6812930
Number of successful extensions: 24845
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 24819
Number of HSP's gapped (non-prelim): 49
length of query: 520
length of database: 191,569,459
effective HSP length: 122
effective length of query: 398
effective length of database: 125,736,307
effective search space: 50043050186
effective search space used: 50043050186
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)