Query 042300
Match_columns 520
No_of_seqs 187 out of 1130
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 04:53:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042300.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042300hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1397 Ca2+/H+ antiporter VCX 100.0 1.2E-43 2.6E-48 361.3 23.8 319 86-519 102-437 (441)
2 TIGR00378 cax calcium/proton e 100.0 5E-42 1.1E-46 357.8 28.5 320 81-513 19-346 (349)
3 TIGR00846 caca2 calcium/proton 100.0 7.1E-40 1.5E-44 343.4 28.0 318 84-515 41-364 (365)
4 COG0387 ChaA Ca2+/H+ antiporte 100.0 5E-36 1.1E-40 307.7 29.5 323 78-517 34-366 (368)
5 PRK10734 putative calcium/sodi 100.0 1E-34 2.2E-39 300.1 28.8 311 79-518 4-319 (325)
6 COG0530 ECM27 Ca2+/Na+ antipor 100.0 1.6E-33 3.6E-38 289.9 27.3 305 79-517 11-319 (320)
7 TIGR00367 K+-dependent Na+/Ca+ 100.0 1.6E-31 3.5E-36 274.5 26.3 296 83-510 7-306 (307)
8 PRK10599 calcium/sodium:proton 100.0 1.1E-30 2.4E-35 271.2 26.8 305 90-516 50-365 (366)
9 TIGR00927 2A1904 K+-dependent 99.9 1.3E-22 2.9E-27 226.1 26.7 142 375-519 936-1086(1096)
10 KOG1307 K+-dependent Ca2+/Na+ 99.8 1E-18 2.2E-23 182.1 21.6 142 375-520 427-579 (588)
11 PLN03151 cation/calcium exchan 99.7 1.7E-15 3.6E-20 168.9 30.3 140 374-516 486-637 (650)
12 PRK10734 putative calcium/sodi 99.5 3.1E-13 6.8E-18 140.3 15.4 137 373-516 4-144 (325)
13 PF01699 Na_Ca_ex: Sodium/calc 99.4 5.5E-13 1.2E-17 120.5 8.5 129 383-514 2-139 (140)
14 TIGR00367 K+-dependent Na+/Ca+ 99.4 6.9E-12 1.5E-16 129.4 14.8 138 374-516 4-143 (307)
15 COG0530 ECM27 Ca2+/Na+ antipor 99.3 2.7E-11 5.8E-16 125.5 15.3 139 371-516 9-151 (320)
16 PF01699 Na_Ca_ex: Sodium/calc 99.3 5.5E-12 1.2E-16 113.9 8.3 135 89-256 2-139 (140)
17 TIGR00927 2A1904 K+-dependent 99.3 1.5E-11 3.3E-16 138.7 12.5 132 381-517 469-604 (1096)
18 TIGR00846 caca2 calcium/proton 99.1 3.3E-10 7.2E-15 119.5 12.2 139 79-255 222-362 (365)
19 PLN03151 cation/calcium exchan 98.9 2.9E-08 6.3E-13 111.4 14.9 131 382-516 153-288 (650)
20 TIGR00845 caca sodium/calcium 98.8 2.4E-08 5.2E-13 114.5 13.8 142 373-517 755-919 (928)
21 TIGR00378 cax calcium/proton e 98.8 1.9E-08 4.1E-13 105.7 11.8 139 79-255 206-346 (349)
22 TIGR00845 caca sodium/calcium 98.7 9.4E-08 2E-12 109.8 13.7 89 81-176 757-848 (928)
23 KOG2399 K+-dependent Na+:Ca2+ 98.6 3.6E-06 7.9E-11 93.6 22.5 136 374-512 449-594 (605)
24 KOG1307 K+-dependent Ca2+/Na+ 98.1 2.3E-06 4.9E-11 90.8 4.6 127 373-513 63-200 (588)
25 PRK10599 calcium/sodium:proton 97.5 0.00081 1.8E-08 71.1 11.2 141 79-257 223-364 (366)
26 COG0387 ChaA Ca2+/H+ antiporte 96.3 0.035 7.6E-07 58.6 11.1 145 73-255 216-362 (368)
27 PF13499 EF-hand_7: EF-hand do 95.5 0.015 3.2E-07 45.6 3.5 52 301-352 2-53 (66)
28 KOG2399 K+-dependent Na+:Ca2+ 94.5 0.21 4.6E-06 56.3 10.3 135 91-256 460-596 (605)
29 PF13202 EF-hand_5: EF hand; P 93.5 0.057 1.2E-06 35.0 2.1 24 301-324 1-24 (25)
30 PF13405 EF-hand_6: EF-hand do 93.5 0.062 1.3E-06 36.2 2.3 26 301-326 2-27 (31)
31 cd05026 S-100Z S-100Z: S-100Z 93.0 0.35 7.5E-06 41.2 6.7 54 299-352 10-66 (93)
32 PF00036 EF-hand_1: EF hand; 92.8 0.086 1.9E-06 35.5 2.1 25 301-325 2-26 (29)
33 KOG1306 Ca2+/Na+ exchanger NCX 92.7 0.16 3.6E-06 55.2 5.3 104 66-176 415-520 (596)
34 KOG1306 Ca2+/Na+ exchanger NCX 92.6 0.19 4.1E-06 54.7 5.5 70 387-458 441-511 (596)
35 KOG1397 Ca2+/H+ antiporter VCX 92.5 1.5 3.2E-05 46.8 11.8 88 79-173 291-380 (441)
36 cd00052 EH Eps15 homology doma 91.2 0.29 6.4E-06 37.8 3.9 45 302-352 2-46 (67)
37 cd05025 S-100A1 S-100A1: S-100 89.1 0.57 1.2E-05 39.5 4.3 53 298-352 8-65 (92)
38 cd05027 S-100B S-100B: S-100B 88.3 0.79 1.7E-05 38.8 4.5 51 298-352 7-64 (88)
39 KOG0027 Calmodulin and related 87.5 0.96 2.1E-05 41.6 5.0 52 297-352 83-134 (151)
40 smart00027 EH Eps15 homology d 87.1 0.93 2E-05 38.5 4.3 48 299-352 10-57 (96)
41 cd05022 S-100A13 S-100A13: S-1 86.6 0.95 2.1E-05 38.5 4.1 52 298-352 7-60 (89)
42 cd00213 S-100 S-100: S-100 dom 86.2 1.3 2.8E-05 36.8 4.6 54 299-352 8-64 (88)
43 COG5126 FRQ1 Ca2+-binding prot 85.6 1.3 2.9E-05 41.8 4.9 52 297-352 90-141 (160)
44 cd05029 S-100A6 S-100A6: S-100 85.0 3.7 8.1E-05 34.7 7.0 51 300-352 11-64 (88)
45 cd00252 SPARC_EC SPARC_EC; ext 83.3 2.1 4.5E-05 38.3 4.8 48 297-352 46-93 (116)
46 cd05031 S-100A10_like S-100A10 80.4 2.7 5.9E-05 35.5 4.4 52 299-352 8-64 (94)
47 KOG0027 Calmodulin and related 77.0 4.3 9.4E-05 37.3 5.0 50 299-352 8-57 (151)
48 cd00051 EFh EF-hand, calcium b 72.4 7.9 0.00017 28.0 4.6 47 301-351 2-48 (63)
49 cd05023 S-100A11 S-100A11: S-1 71.4 6.7 0.00015 33.2 4.4 53 299-352 9-65 (89)
50 KOG0028 Ca2+-binding protein ( 71.2 6.8 0.00015 37.1 4.7 52 297-352 104-155 (172)
51 PTZ00183 centrin; Provisional 70.4 8.8 0.00019 34.5 5.3 52 297-352 88-139 (158)
52 smart00054 EFh EF-hand, calciu 69.7 4.7 0.0001 24.4 2.4 25 301-325 2-26 (29)
53 COG5126 FRQ1 Ca2+-binding prot 63.9 12 0.00027 35.4 4.9 48 299-350 20-67 (160)
54 PF13833 EF-hand_8: EF-hand do 60.4 10 0.00022 28.2 3.1 29 296-324 22-50 (54)
55 PTZ00184 calmodulin; Provision 59.6 16 0.00034 32.2 4.7 51 298-352 83-133 (149)
56 COG3462 Predicted membrane pro 58.5 91 0.002 27.8 8.8 22 237-258 51-72 (117)
57 KOG0037 Ca2+-binding protein, 54.2 18 0.0004 35.8 4.4 46 302-351 127-172 (221)
58 PTZ00184 calmodulin; Provision 54.2 22 0.00047 31.3 4.7 51 298-352 10-60 (149)
59 PTZ00183 centrin; Provisional 50.3 31 0.00067 30.9 5.1 51 298-352 16-66 (158)
60 PF13499 EF-hand_7: EF-hand do 49.3 17 0.00036 28.0 2.7 26 298-323 39-64 (66)
61 cd05024 S-100A10 S-100A10: A s 48.0 83 0.0018 27.1 6.9 50 300-352 9-61 (91)
62 PF14788 EF-hand_10: EF hand; 47.6 20 0.00044 27.5 2.8 31 294-324 16-46 (51)
63 cd05030 calgranulins Calgranul 47.4 33 0.00071 28.7 4.4 54 299-352 8-64 (88)
64 PRK09509 fieF ferrous iron eff 46.2 3E+02 0.0065 28.2 12.2 60 371-430 78-137 (299)
65 KOG0036 Predicted mitochondria 45.9 28 0.00061 37.7 4.5 51 298-352 81-131 (463)
66 KOG0028 Ca2+-binding protein ( 41.8 39 0.00084 32.2 4.3 50 299-352 33-82 (172)
67 PLN02964 phosphatidylserine de 38.5 44 0.00096 38.5 5.0 54 295-352 172-228 (644)
68 KOG0031 Myosin regulatory ligh 36.7 57 0.0012 30.9 4.5 45 299-347 32-76 (171)
69 PRK03557 zinc transporter ZitB 35.3 4.7E+02 0.01 27.1 11.7 55 371-427 86-141 (312)
70 PF07172 GRP: Glycine rich pro 34.3 21 0.00045 30.9 1.2 27 1-27 1-28 (95)
71 KOG0031 Myosin regulatory ligh 33.8 80 0.0017 30.0 5.0 48 297-348 99-146 (171)
72 PRK03612 spermidine synthase; 33.2 4.3E+02 0.0093 29.6 11.7 19 440-458 146-164 (521)
73 cd05026 S-100Z S-100Z: S-100Z 33.0 50 0.0011 27.9 3.3 34 295-328 49-82 (93)
74 PF05042 Caleosin: Caleosin re 32.2 29 0.00064 33.3 1.9 40 290-329 87-126 (174)
75 PF12794 MscS_TM: Mechanosensi 31.7 6.3E+02 0.014 26.6 14.1 26 247-272 238-265 (340)
76 KOG4251 Calcium binding protei 30.2 58 0.0013 33.0 3.7 35 291-325 91-127 (362)
77 KOG0034 Ca2+/calmodulin-depend 29.8 79 0.0017 30.7 4.5 54 299-352 104-160 (187)
78 KOG0041 Predicted Ca2+-binding 28.5 93 0.002 30.8 4.6 29 300-328 100-128 (244)
79 COG2860 Predicted membrane pro 25.8 93 0.002 30.8 4.2 71 413-491 8-82 (209)
80 PF14658 EF-hand_9: EF-hand do 25.3 90 0.0019 25.3 3.3 47 303-352 2-48 (66)
81 PRK12309 transaldolase/EF-hand 25.1 82 0.0018 34.1 4.0 28 294-321 329-356 (391)
82 cd00252 SPARC_EC SPARC_EC; ext 24.1 78 0.0017 28.3 3.1 27 298-324 79-105 (116)
83 cd05025 S-100A1 S-100A1: S-100 23.6 84 0.0018 26.1 3.1 30 296-325 49-78 (92)
84 cd05027 S-100B S-100B: S-100B 23.3 90 0.0019 26.2 3.2 34 295-328 47-80 (88)
85 cd05031 S-100A10_like S-100A10 22.9 77 0.0017 26.5 2.7 34 296-329 48-81 (94)
86 KOG0044 Ca2+ sensor (EF-Hand s 22.1 1.1E+02 0.0024 29.8 4.0 55 298-352 99-160 (193)
87 cd05024 S-100A10 S-100A10: A s 21.4 95 0.0021 26.7 2.9 33 296-328 45-77 (91)
88 cd05023 S-100A11 S-100A11: S-1 20.4 1.1E+02 0.0024 25.7 3.2 29 297-325 50-78 (89)
89 PRK10929 putative mechanosensi 20.3 1.7E+03 0.037 27.7 18.5 21 250-270 714-736 (1109)
90 KOG4770 NADH dehydrogenase sub 20.2 3.4E+02 0.0074 28.0 6.9 68 443-517 229-306 (315)
91 PF12670 DUF3792: Protein of u 20.0 4.9E+02 0.011 22.9 7.4 35 484-518 52-87 (116)
No 1
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-43 Score=361.27 Aligned_cols=319 Identities=22% Similarity=0.340 Sum_probs=265.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhHHHHHHHHHH
Q 042300 86 YGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLW 165 (520)
Q Consensus 86 ~~~lL~~~A~lls~gse~La~~lg~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS~i~nLtLi~ 165 (520)
-...++|.|++++.++|+|+...|| .+||++|+++||+.|+++.++|.. |+++.+++++++||++.|+++++
T Consensus 102 sll~iiPLA~~l~~ateqls~~tg~-tvGgllNAtfGnaiElii~ilALk-------~g~~riVq~SlLGSILsnlLLvl 173 (441)
T KOG1397|consen 102 SLLGIIPLAERLGFATEQLSAYTGP-TVGGLLNATFGNAIELIIYILALK-------NGKVRIVQGSLLGSILSNLLLVL 173 (441)
T ss_pred HHhhhhhHHHHHHHHHHHHHhhcCC-cHHHHHhhhhccHHHHHHHHHHhh-------cCceEEEehhhHHHHHHHHHHHh
Confidence 3346889999999999999999999 889999999999999999999998 99999999999999999999999
Q ss_pred HHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhccccc--------ccccch
Q 042300 166 GSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSI--------SRVTVL 237 (520)
Q Consensus 166 G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~--------~~~~~~ 237 (520)
|+|++.|+++ |++|.||.+.++ .++.++.++++..+ +|++++.+.+ ......
T Consensus 174 G~s~~~Ggi~---------rk~Q~Fn~~~A~--------v~s~lLl~a~l~~l---~P~~l~~~~~~~~~~~~~~~~~l~ 233 (441)
T KOG1397|consen 174 GLSLFCGGIR---------RKDQRFNIKSAG--------VNSALLLLAVLGIL---LPTVLHYTYGGEVHDCSSGGAILP 233 (441)
T ss_pred hHHHhhcccc---------cceeecccchhh--------HHHHHHHHHHHHHH---HHHHHHHhcCccccccCCccceee
Confidence 9999999999 789999999888 47788888888877 8999986543 223567
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCccc
Q 042300 238 ISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLS 317 (520)
Q Consensus 238 is~ivsivlLi~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i~ 317 (520)
+||..|++++++|.+|++||+| +|+|.+.. -.|++| |.+.|+..+
T Consensus 234 lSr~~SivmliaYi~~L~FqL~-----------------t~~h~~~~---------~~~~ee---------~~~~d~~~s 278 (441)
T KOG1397|consen 234 LSRGCSIVMLIAYIAYLWFQLK-----------------TARHIWQF---------PTPDEE---------ETEQDDEVS 278 (441)
T ss_pred ehhccHHHHHHHHHHHHHHhhh-----------------cccccCCC---------CCCChh---------ccccccccc
Confidence 9999999999999999999999 44442110 001111 111111110
Q ss_pred HHHHHHHHhcccccccccchhHHHHHHHhhhccccccccCCCCCCcccccchhHHHHHHHHHHHHHHHHchHHhHhhHHH
Q 042300 318 AKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDN 397 (520)
Q Consensus 318 ~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~~~ai~~Lllg~~lv~~~A~~lV~si~~ 397 (520)
. +|| .+.++. ++++++|+..|++++++||++|++||+
T Consensus 279 ~------------------~~e----------~p~is~---------------~ss~~~L~~~T~~vsllaeyLV~~Id~ 315 (441)
T KOG1397|consen 279 N------------------EDE----------APNISR---------------WSSIIWLLIMTLLVSLLAEYLVDTIDD 315 (441)
T ss_pred c------------------cCC----------CCcchH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 111122 789999999999999999999999999
Q ss_pred HHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHH-------HHHHhhccccc
Q 042300 398 FSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSV-------FLSLVYFRHLT 469 (520)
Q Consensus 398 ~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v-------~l~lv~~r~l~ 469 (520)
.++.+|+|+.|||+|++|+++ +.||++||.+|.|+|+|++ -+|..++.+|+++ +.+|.++.+|+
T Consensus 316 ~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLs--------lgVaigsalQI~Lf~vP~~v~v~W~~g~~M~ 387 (441)
T KOG1397|consen 316 VSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLS--------LGVAIGSALQIALFVVPFSVIVGWIMGISMD 387 (441)
T ss_pred HHHhcCCChhhheeeeecccCchHHhhcceeeeecCcccch--------hhhhhhhhHhHHHhhhhHHHHhhhhcCCceE
Confidence 999999999999999999999 9999999999999999999 9999999999876 57899999999
Q ss_pred ccchh-hHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHhhc
Q 042300 470 WNFSA-EVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLD 519 (520)
Q Consensus 470 w~fs~-Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~~l~ 519 (520)
++|+. |+..+++..+++.++. ..++-.+..|.+++++|.+..+-.++.+
T Consensus 388 LnF~~~et~~l~isVfl~~y~l-qdG~Sny~kG~mLll~Y~Iia~~Ff~~~ 437 (441)
T KOG1397|consen 388 LNFPLLETACLFISVFLVAYLL-QDGKSNYFKGLMLLLCYLIIAAGFFVYN 437 (441)
T ss_pred EeccHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHhhccC
Confidence 99999 9999998888877776 4777888899999999987766555443
No 2
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=100.00 E-value=5e-42 Score=357.84 Aligned_cols=320 Identities=20% Similarity=0.328 Sum_probs=252.9
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhHHHH
Q 042300 81 FLIAVYG-YLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVM 159 (520)
Q Consensus 81 fL~~v~~-~lL~~~A~lls~gse~La~~lg~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS~i~ 159 (520)
-+.+++. ..++|+|+++++++|.+|+++|| .+||++++.+||+||+++++.|.. +|+.++++||++|||++
T Consensus 19 ~~~F~~~~~aiipla~~l~~~~~~lA~~~g~-~vggl~~~~~gt~pEL~vsi~A~~-------~g~~~i~~gnivGS~i~ 90 (349)
T TIGR00378 19 TLTFLFNFLAIIPLAAIMGNATEELADKAGP-TIGGLLNATFGNAVELIVSIIALK-------EGLVRIVQASLTGSLLG 90 (349)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-hHHHHHHHhhccHHHHHHHHHHHH-------cCChhhhHHHHHHHHHH
Confidence 3444444 47889999999999999999998 889999999999999999999999 67778999999999999
Q ss_pred HHHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhccccc---ccccc
Q 042300 160 LLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSI---SRVTV 236 (520)
Q Consensus 160 nLtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~---~~~~~ 236 (520)
|+++++|+|+++|+++ +++|.|+...++ ....+|+++++.++ +|+.++.... +....
T Consensus 91 NllLilGls~liggl~---------~~~q~~~~~~a~--------~~~~ll~la~~~l~---lp~~~~~~~~~~~~~~~~ 150 (349)
T TIGR00378 91 NLLLVLGLCFFFGGLN---------YKQQTFNQTAAR--------TNSSLLAIACVALL---IPAARATLSHGKEDGKIL 150 (349)
T ss_pred hHHHHHHHHHHHhccc---------cceeecCHHHHH--------HHHHHHHHHHHHHH---hhhHHHhcCCCccchHHH
Confidence 9999999999999998 467878766554 45778888887776 7866543221 12234
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCcc
Q 042300 237 LISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCL 316 (520)
Q Consensus 237 ~is~ivsivlLi~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i 316 (520)
.+++..+++++++|++|++||.+ +||+. |++.+++.|+ .
T Consensus 151 ~ls~~~aiill~lY~~~L~~~l~-----------------~h~~~-----------------------f~~~~~~~~~-~ 189 (349)
T TIGR00378 151 NLSRGTSIVIIIVYVLFLYFQLG-----------------THHAL-----------------------YEQQEAETDE-V 189 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh-----------------hHHHH-----------------------hCCccccccc-c
Confidence 69999999999999999999988 33321 1100000000 0
Q ss_pred cHHHHHHHHhcccccccccchhHHHHHHHhhhccccccccCCCCCCcccccchhHHHHHHHHHHHHHHHHchHHhHhhHH
Q 042300 317 SAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVD 396 (520)
Q Consensus 317 ~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~~~ai~~Lllg~~lv~~~A~~lV~si~ 396 (520)
++|.. +.+++...+ ++++.++++|+++++++||++|++++
T Consensus 190 -~~~~~-------------~~~~~~~~~--------------------------~~~~~~L~~~~v~i~~~a~~lv~~~~ 229 (349)
T TIGR00378 190 -METIE-------------RNPHHSLSV--------------------------KSSTVVLLGTTVIVAFCSEFLVGTID 229 (349)
T ss_pred -ccccc-------------ccccccccH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000000000 45778899999999999999999999
Q ss_pred HHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHH--HHHHhhcccccccch
Q 042300 397 NFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSV--FLSLVYFRHLTWNFS 473 (520)
Q Consensus 397 ~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v--~l~lv~~r~l~w~fs 473 (520)
.+++++|+|+.|+|++++|++| +||+++|+.+|+|||.|++ ++|+.|++..|..+++.+ +.+|...+|++++|+
T Consensus 230 ~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~~~~~~a---i~~~~GS~i~~~l~v~p~lvl~~~~~~~~~~L~f~ 306 (349)
T TIGR00378 230 NVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMKDKMDLA---LGVAIGSSLQIALFVAPVLVIVGWMIDVPMTLNFS 306 (349)
T ss_pred HHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcccH---HHHHHhHHHHHHHHHHHHHHHHHHHhCCCceecCc
Confidence 9999999999999999999999 9999999999999999999 999999999888777655 688999999999999
Q ss_pred h-hHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHH
Q 042300 474 A-EVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLL 513 (520)
Q Consensus 474 ~-Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~ 513 (520)
. |+..+++.++++... ..+++.++.+|.+++++|....+
T Consensus 307 ~~~~~~l~~~v~~~~~~-~~dg~~n~leG~~ll~~Y~i~~~ 346 (349)
T TIGR00378 307 TFELVALFIAVLLSNYI-SLDGESNWLEGVMLLAMYIIIAM 346 (349)
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCcHHHHHHHHHHHHHHHH
Confidence 8 988888766555544 45778899999999999976643
No 3
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=100.00 E-value=7.1e-40 Score=343.41 Aligned_cols=318 Identities=20% Similarity=0.266 Sum_probs=243.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhHHHHHHHH
Q 042300 84 AVYGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTV 163 (520)
Q Consensus 84 ~v~~~lL~~~A~lls~gse~La~~lg~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS~i~nLtL 163 (520)
+....+++++|+++++++|++++++|. .+|+++++++||+||+++++.|.. +++.++++||++|||++|+++
T Consensus 41 ~~~~~~li~~a~~lv~~a~~lA~~~G~-~vG~ll~a~~ts~pEL~vsi~A~~-------~g~~~la~gnivGS~i~NilL 112 (365)
T TIGR00846 41 LLNLLGIIPLAERVSFATEQLAHRLGP-TLGGLLNATFGNAVELIISLMALG-------EGKVEVVRASLLGSILSNLLL 112 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC-chhhHHHHHHhHHHHHHHHHHHcc-------CCcHHHHHHHHHHHHHHHHHH
Confidence 344458899999999999999999997 489999999999999999999998 667778899999999999999
Q ss_pred HHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhccccc-ccccchhhHHH
Q 042300 164 LWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSI-SRVTVLISLIV 242 (520)
Q Consensus 164 i~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~-~~~~~~is~iv 242 (520)
++|+|+++|+++.. ++|.|+...++ +...+|+++++.++ +|.++....+ .+....+++.+
T Consensus 113 IlGl~~l~~~~~~~--------~~~~~~~~~~~--------~~~~ll~~~~~~l~---lp~~~~~~~~~~~~~~~ls~~~ 173 (365)
T TIGR00846 113 VLGLSLFLGGIKNI--------REQRFNRGAAQ--------VNSALLLLAILSLV---LPLALPAGKPGQDSILGLSRGI 173 (365)
T ss_pred HHHHHHHHhccCcc--------ceeeccHHHHH--------HHHHHHHHHHHHHH---hhhHHhhcCCCcchhHHHHHHH
Confidence 99999999999841 23445433322 34556666665555 6766533222 22334589999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCcccHHHHH
Q 042300 243 SISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELR 322 (520)
Q Consensus 243 sivlLi~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i~~~El~ 322 (520)
+++++++|.+|++|+.+ .|++.. +++ ++ .|++.|+ ++
T Consensus 174 giill~ly~~yl~~~~~-----------------~~~~~f--------~~~---~~---------~~~~~~~----~~-- 210 (365)
T TIGR00846 174 AIVMLILYGAFLVFQLV-----------------THRQLF--------EPQ---EE---------ADSDYDD----EV-- 210 (365)
T ss_pred HHHHHHHHHHHHHHHhc-----------------cchhcc--------ccc---cc---------ccccccc----cc--
Confidence 99999999999999988 333210 000 00 0000000 00
Q ss_pred HHHhcccccccccchhH-HHHHHHhhhccccccccCCCCCCcccccchhHHHHHHHHHHHHHHHHchHHhHhhHHHHHhh
Q 042300 323 ALVIGIQFEDIDMNIDE-LLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTA 401 (520)
Q Consensus 323 ~l~~~~~~~~~~~~~~~-~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~~~ai~~Lllg~~lv~~~A~~lV~si~~~s~~ 401 (520)
++++ +... ++++.++++|+++++++||++|++++.++++
T Consensus 211 -------------~~~~~~~~~---------------------------~~~i~~l~~~~~~l~~~a~~lv~~~~~ia~~ 250 (365)
T TIGR00846 211 -------------HEEPTVISP---------------------------WSAAAWLVGATIVVALLAEYLVDTIESAVES 250 (365)
T ss_pred -------------ccccccccH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 0000 4678899999999999999999999999999
Q ss_pred cCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHH--HHHHhhcccccccchh-hHH
Q 042300 402 SNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSV--FLSLVYFRHLTWNFSA-EVS 477 (520)
Q Consensus 402 ~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v--~l~lv~~r~l~w~fs~-Evl 477 (520)
+|+|+.|+|++++|++| +||+++|+.+|+|||.|++ ++|+.|+++.|..+++++ +.+|...++++..|+. |..
T Consensus 251 ~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~~la---vg~~iGSni~n~l~vl~~~~li~~~~~~~~~l~~~~~~~~ 327 (365)
T TIGR00846 251 WGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIA---LGVALGSALQIALFVVPVVVLVAWMLGIPMDLNFGAPETV 327 (365)
T ss_pred cCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcchH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCceeccCcHHHHH
Confidence 99999999999999999 9999999999999999999 999999999999988887 4567667788888877 765
Q ss_pred HHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHH
Q 042300 478 VILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLL 515 (520)
Q Consensus 478 villv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv 515 (520)
++++.+ ++..+...+++.+|++|.+++++|..++...
T Consensus 328 ~l~~s~-~~~~~~~~~~~~~~~eG~~ll~~Y~~~~~~~ 364 (365)
T TIGR00846 328 ALALSV-FLTTITLQDGRSNYLEGAVLLALYIIIAMLF 364 (365)
T ss_pred HHHHHH-HHHHHHHcCCcCcHHHHHHHHHHHHHHHHHh
Confidence 555444 4443444678899999999999998887654
No 4
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-36 Score=307.67 Aligned_cols=323 Identities=22% Similarity=0.317 Sum_probs=263.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhHH
Q 042300 78 GNVFLIAVYGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGST 157 (520)
Q Consensus 78 g~~fL~~v~~~lL~~~A~lls~gse~La~~lg~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS~ 157 (520)
|....++....+.+|.|.++++++|.+++|.|| .+|++++++++++.|.+++.++.. +|+..++.+++.||+
T Consensus 34 ~~~~~fi~~~l~i~plA~~v~~aaE~lA~~vG~-~~G~Lina~f~~~iEvil~~~al~-------~G~~~lvr~Si~gsI 105 (368)
T COG0387 34 GPVVIFIAALLAIIPLAFSVVRAAEVLAARVGE-PYGSLINALFGNAIEVILIVAALK-------SGSPTLVRDSLYGSI 105 (368)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHHHHHHHHHHHHHHh-------CCCchhhHHHHHHHH
Confidence 456677777888889999999999999999999 899999999999999999999998 456668899999999
Q ss_pred HHHHHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccch
Q 042300 158 VMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVL 237 (520)
Q Consensus 158 i~nLtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~~ 237 (520)
+.|++++.|+|+++|+++ |++|.||..+++. +.+-+...+++.++ +|.+++.+.+......
T Consensus 106 m~~~llv~GlslllGglr---------~~~Q~fN~~~a~~-------~~~~L~~~~~ialv---~P~~~~~~~~~~~~~~ 166 (368)
T COG0387 106 MINLLLVVGLSLLLGGLR---------HKTQPFNPHGAGT-------YLALLFTAATIALV---LPTFFPYTGGGNFSLG 166 (368)
T ss_pred HHHHHHHHHHHHHHcchh---------hceeecchhhHHH-------HHHHHHHHHHHHhh---hhhhhcccCCCcchHh
Confidence 999999999999999999 7999999988873 44444444467777 8999987666666678
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCccc
Q 042300 238 ISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLS 317 (520)
Q Consensus 238 is~ivsivlLi~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i~ 317 (520)
.|..++++++++|.++++||.+ +|+++ |..-++++ ++
T Consensus 167 ~s~~~avv~i~~Y~lfL~fql~-----------------tH~~~-----------------------f~~~~~~e-~~-- 203 (368)
T COG0387 167 QSLFVAVVLIALYGLFLFFQLK-----------------THASL-----------------------FWQVHEAE-GE-- 203 (368)
T ss_pred HHHHHHHHHHHHHHHHHHhhhh-----------------hhhhh-----------------------hccccccc-cc--
Confidence 9999999999999999999999 55643 22111110 00
Q ss_pred HHHHHHHHhcccccccccchhHHHHHHHhhhccccccccCCCCCCcccccchh-HHHHHHHHHHHHHHHHchHHhHhhHH
Q 042300 318 AKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQ-EVSVSILLMGTIVAAVCSDPLVDAVD 396 (520)
Q Consensus 318 ~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~-~~ai~~Lllg~~lv~~~A~~lV~si~ 396 (520)
.+| + +++.+..++|+ +++..+|+++++++++.||.+|+++|
T Consensus 204 ~ee-----------------~---------------------~~h~~~~~~~s~~~s~~vLl~~tv~v~~lae~lv~~le 245 (368)
T COG0387 204 AEE-----------------D---------------------DPHHDDPSKWSVLLSTGVLLIATVLVALLAEILVGSLE 245 (368)
T ss_pred CCC-----------------C---------------------CCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00000001111 56889999999999999999999999
Q ss_pred HHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHHH-------HHHhhcccc
Q 042300 397 NFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVF-------LSLVYFRHL 468 (520)
Q Consensus 397 ~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v~-------l~lv~~r~l 468 (520)
...++.|.|+.|+|+++.|+.+ +||++||+.+|+|||+|++ .++++++.+|...| .+|..++||
T Consensus 246 ~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls--------~nia~Gsalq~~lltiP~lvlis~~~gqpm 317 (368)
T COG0387 246 AVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLS--------MNIAMGSALQTALLTIPVLVLISLFTGQPL 317 (368)
T ss_pred HHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999999 9999999999999999999 99999999998764 578889999
Q ss_pred cccchh-hHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHh
Q 042300 469 TWNFSA-EVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYV 517 (520)
Q Consensus 469 ~w~fs~-Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~~ 517 (520)
++.|.+ |+..++...++ .......++-++.+|.+.+++|..+....++
T Consensus 318 ~l~~~~~elV~l~~~v~~-~~~~~sdG~sn~leG~~lL~lya~~~~~ff~ 366 (368)
T COG0387 318 TLGFGPPELVLLVVTVFL-ANILFSDGRTNWLEGVVLLALYAIYAMLFFF 366 (368)
T ss_pred cccCCHHHHHHHHHHHHH-HHHhcCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999 87777665444 4455567788888999999999999887765
No 5
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=1e-34 Score=300.06 Aligned_cols=311 Identities=18% Similarity=0.224 Sum_probs=229.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhH
Q 042300 79 NVFLIAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGS 156 (520)
Q Consensus 79 ~~fL~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS 156 (520)
+++++++...+++.++++++++++.+++++| |.++|.++.++.||+||+++++.|.+ +++.++++||++||
T Consensus 4 ~~~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~-------~g~~~ia~GnilGS 76 (325)
T PRK10734 4 ATALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASL-------HGQRDLAVGTALGS 76 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHH-------cCCCcchhhhhhhH
Confidence 4667778888999999999999999999988 78889999999999999999999998 56667999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccc
Q 042300 157 TVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTV 236 (520)
Q Consensus 157 ~i~nLtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~ 236 (520)
|++|+++++|++.++++.+.+. +.+ +++..+|+.+.+.+..+ . . ..
T Consensus 77 ni~ni~lilg~~~l~~~~~~~~---------~~~-------------~~~~~~ll~~~~~~~~~-~---~--------~~ 122 (325)
T PRK10734 77 NITNILLILGLAALIRPFTVHS---------DVL-------------RRELPLMLLVSVLAGSV-L---Y--------DG 122 (325)
T ss_pred HHHHHHHHHHHHHHhCCcccCh---------HHH-------------HHHHHHHHHHHHHHHHH-H---H--------CC
Confidence 9999999999999998876421 111 23444554443322211 1 0 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCcc
Q 042300 237 LISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCL 316 (520)
Q Consensus 237 ~is~ivsivlLi~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i 316 (520)
.+++..++++++.|..|.+++.+..+++ + ++ +++++
T Consensus 123 ~l~~~~g~~ll~~~~~yl~~~~~~~~~~--------------~------------~~---------------~~~~~--- 158 (325)
T PRK10734 123 QLSRSDGIFLLLLAVLWLLFIVKIARLA--------------E------------RQ---------------GNDSL--- 158 (325)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhc--------------c------------cc---------------ccccc---
Confidence 3689999999999999999988732211 0 00 00000
Q ss_pred cHHHHHHHHhcccccccccchhHHHHHHHhhhccccccccCCCCCCcccccchhHHHHHHHHHHHHHHHHchHHhHhhHH
Q 042300 317 SAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVD 396 (520)
Q Consensus 317 ~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~~~ai~~Lllg~~lv~~~A~~lV~si~ 396 (520)
+++|.+ + .++++ +. .++..++++|.+++.++++.+|++.+
T Consensus 159 ~~~~~~---------~--~~~~~--~~---------------------------~~~~~~l~~g~~~l~~gs~~lv~~~~ 198 (325)
T PRK10734 159 TREQLA---------E--LPREG--GL---------------------------PVAFLWLGIALIIMPMATRMVIDNAT 198 (325)
T ss_pred chhhhc---------c--ccccc--cH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0 00000 00 34678888999999999999999999
Q ss_pred HHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHHHHHHhhcccc-cccchh
Q 042300 397 NFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSLVYFRHL-TWNFSA 474 (520)
Q Consensus 397 ~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v~l~lv~~r~l-~w~fs~ 474 (520)
.+++.+|+|+.++|++++|++| +||+++|+.+++|||.+++ +||+.|++++|.++++++-....-. +. .-.+..
T Consensus 199 ~ia~~lgis~~~iG~tiva~gtslPE~~~sv~a~~~g~~~~a---vgniiGsnifni~~~lg~~~l~~~~-~v~~~~~~~ 274 (325)
T PRK10734 199 VLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGENDIA---VGNIIGSNIFNIVIVLGLPALISPG-EINPLAFSR 274 (325)
T ss_pred HHHHHhCCcHHHHHHHHHHHhccHHHHHHHHHHHHcCCCchH---HHHHHhHHHHHHHHHHHHHHhhccc-cccchhHHH
Confidence 9999999999999999999999 9999999999999999999 9999999999999888774322110 01 011233
Q ss_pred hHHHHHHHHHHHHHHHh-cCCccchHHHHHHHHHHHHHHHHHHhh
Q 042300 475 EVSVILLVCILMGLIAS-FRTTFPLWMCLVACMLYPFSLLLLYVL 518 (520)
Q Consensus 475 Evlvillv~~~vg~~~~-~r~t~~~~~g~~~~~lY~~sl~lv~~l 518 (520)
+...++.++.++..+.. .+++..||+|+.++.+|..++...+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~i~r~~G~~Ll~~Y~~y~~~l~~~ 319 (325)
T PRK10734 275 DYWVMLLVSVIFALLCWRRKRRIGRGAGALLLGGFIVWLAMLYWL 319 (325)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccChHHHHHHHHHHHHHHHHHHhc
Confidence 44445455554333332 466899999999999999999888876
No 6
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-33 Score=289.91 Aligned_cols=305 Identities=20% Similarity=0.291 Sum_probs=243.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhH
Q 042300 79 NVFLIAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGS 156 (520)
Q Consensus 79 ~~fL~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS 156 (520)
++.++.+...+++.+|+++.++++.+++++| +.++|.++++++||+||+.++++|.+.| +.+++.|+++||
T Consensus 11 ~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g-------~~~iavGnvlGS 83 (320)
T COG0530 11 LILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSG-------NPDIAVGNVLGS 83 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcC-------CCCeeeehhhhH
Confidence 4556666777899999999999999999999 5699999999999999999999999954 456889999999
Q ss_pred HHHHHHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccc
Q 042300 157 TVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTV 236 (520)
Q Consensus 157 ~i~nLtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~ 236 (520)
|++|+++++|.+.++.+.+..+ . ..+++..+|+++.+.+..+.. ..
T Consensus 84 ni~ni~li~gl~ali~~~~~~~---------~-------------~~~r~~~f~ll~~~~~~~~~~------------~~ 129 (320)
T COG0530 84 NIFNILLILGLAALIAPLKVDS---------D-------------VLRREIPFLLLATLILLLVLL------------DG 129 (320)
T ss_pred HHHHHHHHHHHHHHHhhhHhhh---------h-------------HHHHhhHHHHHHHHHHHHHHH------------cC
Confidence 9999999999999998888421 1 124677888777766552111 13
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCcc
Q 042300 237 LISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCL 316 (520)
Q Consensus 237 ~is~ivsivlLi~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i 316 (520)
.+++..++.++..|+.|.++..|.+++. ++.|+
T Consensus 130 ~~~~~~gi~ll~l~~~yl~~~~~~~~~~---------------------------------------------~~~~~-- 162 (320)
T COG0530 130 HLSRLDGIVLLLLYVLYLYYLLKLSREA---------------------------------------------EEPGE-- 162 (320)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhhhhc---------------------------------------------ccccc--
Confidence 5778899999999999999988843321 00000
Q ss_pred cHHHHHHHHhcccccccccchhHHHHHHHhhhccccccccCCCCCCcccccchhHHHHHHHHHHHHHHHHchHHhHhhHH
Q 042300 317 SAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVD 396 (520)
Q Consensus 317 ~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~~~ai~~Lllg~~lv~~~A~~lV~si~ 396 (520)
.++|. +++... .++.+++++|.+.+.++++.+|++++
T Consensus 163 ~~~e~--------------~~~~~~-----------------------------~~~~~~~~~~~~~l~~g~~llv~~~~ 199 (320)
T COG0530 163 QENER--------------PKKGSL-----------------------------RKALLVLVIGLILLVVGSELLVDGAV 199 (320)
T ss_pred ccccc--------------cccchH-----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000000 56789999999999999999999999
Q ss_pred HHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHHHHHHhhcccccccchhh
Q 042300 397 NFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAE 475 (520)
Q Consensus 397 ~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v~l~lv~~r~l~w~fs~E 475 (520)
++++.+|+|+.++|++++|++| +||.++++.+++|||.+++ +||+.|++++|.++.+|+.....-.+..+-.+..+
T Consensus 200 ~iA~~~gi~e~~igltivaigTSlPElv~si~a~rkg~~~ia---vGnviGSni~n~~~~lGi~~~~~~~~~~~~~~~~~ 276 (320)
T COG0530 200 EIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARKGEDDIA---VGNVIGSNIFNILIVLGISALIGPITVEPSALLVD 276 (320)
T ss_pred HHHHHcCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCCeE---EeeecchHHHHHHHHHhHHHhccccccCchhHHHH
Confidence 9999999999999999999999 9999999999999999998 99999999999999998865432223334446667
Q ss_pred HHHHHHHHHHHHHH-HhcCCccchHHHHHHHHHHHHHHHHHHh
Q 042300 476 VSVILLVCILMGLI-ASFRTTFPLWMCLVACMLYPFSLLLLYV 517 (520)
Q Consensus 476 vlvillv~~~vg~~-~~~r~t~~~~~g~~~~~lY~~sl~lv~~ 517 (520)
..+++.++++.-.+ ..++++..||+|..++..|+.+..+..+
T Consensus 277 ~~vmi~~~l~l~l~~~~~~~~i~r~~g~~ll~~Y~~~~~~~~~ 319 (320)
T COG0530 277 APVLILVTLLLLLFLARRRRRIGRKEGLLLLGLYIVYVALLIL 319 (320)
T ss_pred HHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhh
Confidence 88888888777777 5789999999999999999988877654
No 7
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=100.00 E-value=1.6e-31 Score=274.53 Aligned_cols=296 Identities=19% Similarity=0.267 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhHHHHH
Q 042300 83 IAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVML 160 (520)
Q Consensus 83 ~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS~i~n 160 (520)
+.+...+++.++++++++.+.+++++| +.++|.++.++.||+||+++.+.+.. +++.++++|+++|||++|
T Consensus 7 ~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~-------~g~~~la~g~ilGS~l~n 79 (307)
T TIGR00367 7 LILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASL-------IGQPDIGVGNVIGSNIFN 79 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHh-------cCCCCeehhhhhhHHHHH
Confidence 334455788999999999999999988 77888899999999999999999998 556679999999999999
Q ss_pred HHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccchhhH
Q 042300 161 LTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISL 240 (520)
Q Consensus 161 LtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~~is~ 240 (520)
+++++|+|.++++.+.+. +.+ .++...++++.+.+.+. + . + ..+++
T Consensus 80 ~l~i~g~~~l~~~~~~~~---------~~~-------------~~d~~~~l~~~~~~~~~-~----~---~----g~i~~ 125 (307)
T TIGR00367 80 ILLILGLSAIFSPIIVDT---------DWL-------------RRDFSFYLLVSILLLFF-G----L---D----GPISR 125 (307)
T ss_pred HHHHHHHHHhhcceeech---------HHH-------------HHHHHHHHHHHHHHHHH-H----H---h----CcchH
Confidence 999999999998765311 111 23445565555443321 1 1 1 24789
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCcccHHH
Q 042300 241 IVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKE 320 (520)
Q Consensus 241 ivsivlLi~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i~~~E 320 (520)
..++++++.|++|++++.+.++++ + + ++ ..+++
T Consensus 126 ~~gi~ll~~Yv~yl~~~~~~~~~~--------------~-------------------------------~-~~-~~~~~ 158 (307)
T TIGR00367 126 LDGVVLLFLYVVYLLFLVKVERQM--------------I-------------------------------N-DT-YTEEQ 158 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--------------c-------------------------------c-cc-cchhh
Confidence 999999999999999987732210 0 0 00 00000
Q ss_pred HHHHHhcccccccccchhHHHHHHHhhhccccccccCCCCCCcccccchhHHHHHHHHHHHHHHHHchHHhHhhHHHHHh
Q 042300 321 LRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFST 400 (520)
Q Consensus 321 l~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~~~ai~~Lllg~~lv~~~A~~lV~si~~~s~ 400 (520)
. +++++.+++ ++.+.++++|.+++.++|+++|++++.+++
T Consensus 159 ~--------------~~~~~~~~~--------------------------~~~~~~~~~~~~~i~~~s~~~v~~~~~i~~ 198 (307)
T TIGR00367 159 L--------------DENNRRKQI--------------------------FFLIVLLIIGLTGLVVGSRLLVDGAVQIAE 198 (307)
T ss_pred h--------------hcccccccH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000 457889999999999999999999999999
Q ss_pred hcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHHHHHHhhcccc-cccchhhHHH
Q 042300 401 ASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSLVYFRHL-TWNFSAEVSV 478 (520)
Q Consensus 401 ~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v~l~lv~~r~l-~w~fs~Evlv 478 (520)
.+|+|+.++|++++|++| +||.++++.+++|||.+++ ++|+.|++.+|.++++++.... ...++ .+.|..+...
T Consensus 199 ~lgi~~~~~g~tl~a~~ts~PE~~~~i~a~~~g~~~~a---vg~~iGs~i~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 274 (307)
T TIGR00367 199 IFGISEKIIGLTLLAIGTSLPELVVSVAAARKGLGDIA---VGNVIGSNIFNILVGLGVPSLF-YPIPVEPLAYSLDAPV 274 (307)
T ss_pred HhCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCchH---HHHHhhhHHHHHHHHHHHHHHh-cccccchhHHHHHHHH
Confidence 999999999999999999 9999999999999999988 9999999999999988773321 11123 2345556666
Q ss_pred HHHHHHHHHHHHhcCCccchHHHHHHHHHHHH
Q 042300 479 ILLVCILMGLIASFRTTFPLWMCLVACMLYPF 510 (520)
Q Consensus 479 illv~~~vg~~~~~r~t~~~~~g~~~~~lY~~ 510 (520)
+++.++++..+..+++++++|+|++++.+|++
T Consensus 275 ~~~~~~~~~~~~~~~~~i~~~~g~~l~~~Y~~ 306 (307)
T TIGR00367 275 MVIVTLVLMLVFKTSMKLGRWEGFLLLALYIA 306 (307)
T ss_pred HHHHHHHHHHHHHhcCeehHHHHHHHHHHHHh
Confidence 66656655555556789999999999999975
No 8
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=99.98 E-value=1.1e-30 Score=271.21 Aligned_cols=305 Identities=17% Similarity=0.246 Sum_probs=237.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcccceeeccccCChhHHHHHHHHhcC--CCcccccccceeeehhhhhHHHHHHHHHHHH
Q 042300 90 MLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLS--GSKETAQNQVSVGMGLLAGSTVMLLTVLWGS 167 (520)
Q Consensus 90 L~~~A~lls~gse~La~~lg~giiGgll~~~lgslPElii~lva~l~--gs~e~Aq~~v~v~~G~l~GS~i~nLtLi~G~ 167 (520)
++.++--.++.+|.+|+|+|+ .+|.+++++.-..-|.+++..-.++ +++..||+. +.-....-++-+.|+
T Consensus 50 i~~~~~~~v~hAe~lA~~~Ge-P~GtliLtlsv~~iEv~li~~~Ml~g~~~~tlaRDt-------vfa~vMi~~nGilGl 121 (366)
T PRK10599 50 ILSSAFSVVRHADVLAHRLGE-PYGSLILSLSVVILEVSLISALMATGDAAPTLMRDT-------LYSIIMIVTGGLVGF 121 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHH-------HHHHHHHHhccHHHH
Confidence 445677788999999999999 8999999999999997776655543 344555553 344445557789999
Q ss_pred HHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccchhhHHHHHHHH
Q 042300 168 CLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSISLV 247 (520)
Q Consensus 168 ~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~~is~ivsivlL 247 (520)
|+++|+++ +++|+||.+++. ++.+.+|.++++.++ +|++++.. ......++.++++++
T Consensus 122 ~ll~GGlr---------~~eQ~fn~~ga~-------~~~~~ll~La~l~Lv---lP~~~~~~---~~s~~~s~~~avv~l 179 (366)
T PRK10599 122 SLLLGGRK---------FATQYMNLFGIK-------QYLIALFPLAIIVLV---FPMALPGA---NFSTGQALLVALISA 179 (366)
T ss_pred HHHHhccc---------cCeeecCHHhHH-------HHHHHHHHHHHHHHh---cCcccCCC---ccchhHHHHHHHHHH
Confidence 99999999 689999987663 389999999999988 99987432 233457899999999
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCcccHHHHHHHHhc
Q 042300 248 IAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIG 327 (520)
Q Consensus 248 i~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~ 327 (520)
+.|+.|++||.+ +||+ +|.. +++|++ +++
T Consensus 180 vlY~~fL~fQl~-----------------tHr~-----------------------~F~~--~~~~~~-~~~-------- 208 (366)
T PRK10599 180 AMYGVFLLIQTK-----------------THQS-----------------------LFVY--EHEDEG-DDD-------- 208 (366)
T ss_pred HHHHHHHHHhcc-----------------chHH-----------------------Hhcc--cccccc-ccc--------
Confidence 999999999998 5554 3431 000000 000
Q ss_pred ccccccccchhHHHHHHHhhhccccccccCCCCCCcccccchhHHHHHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcc
Q 042300 328 IQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSL 407 (520)
Q Consensus 328 ~~~~~~~~~~~~~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~~~ai~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~ 407 (520)
|++. ++++. ...+++..+|+++++.+++.||.+++++|...+++|+|+.
T Consensus 209 ----------~~~~-----------------~~~~~----~~~~~s~~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~a 257 (366)
T PRK10599 209 ----------DPHH-----------------GKPSA----HSSLWHAIWLIIHLIAVIAVTKMNASPLETLLTSMNAPVA 257 (366)
T ss_pred ----------cccc-----------------ccccc----chhHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHH
Confidence 0000 00000 0003467889999999999999999999999999999999
Q ss_pred hhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHH-------HHHHhhcccccccchh-hHHH
Q 042300 408 FVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSV-------FLSLVYFRHLTWNFSA-EVSV 478 (520)
Q Consensus 408 fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v-------~l~lv~~r~l~w~fs~-Evlv 478 (520)
|+|+++ |+.. +||+++|+.+|+|||+|.+ .++++|+.+|... +.+|.+++||++.|++ |+..
T Consensus 258 fiGvII-aiv~~apE~~tAV~aA~kNkmq~s--------lnialGSsLq~illtvP~lvlig~~~g~pm~L~f~~~e~vl 328 (366)
T PRK10599 258 FTGFLV-ALLILSPEGLGALKAVLNNQVQRA--------MNLFFGSVLATISLTVPVVTLIAFLTGNELQFGLGAPEMVV 328 (366)
T ss_pred HHHHHH-HHHHcchhHHHHHHHHHcCchHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCHHHHHH
Confidence 999886 9999 9999999999999999999 9999999999765 5789999999999999 7775
Q ss_pred HHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHH
Q 042300 479 ILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLY 516 (520)
Q Consensus 479 illv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~ 516 (520)
+ +.++++.......++-++.+|.+.+.+|..++.+..
T Consensus 329 L-~ltv~v~~~t~~dGrsN~LeG~~hL~lf~~y~~l~~ 365 (366)
T PRK10599 329 M-VASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTIF 365 (366)
T ss_pred H-HHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 5 566666666656778888999999999999998764
No 9
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.91 E-value=1.3e-22 Score=226.12 Aligned_cols=142 Identities=18% Similarity=0.181 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhH
Q 042300 375 SILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNI 453 (520)
Q Consensus 375 ~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~ 453 (520)
+-.+.+++-+.+++..+|..+..++..+|||+.|+|++++++++ +||+++++..|+|+.-+++ ++|++|++++|.+
T Consensus 936 ltFi~SIiwIsi~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~gdMA---Van~iGSNIFnIl 1012 (1096)
T TIGR00927 936 ITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMA---VSSSVGSNIFDIT 1012 (1096)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCCcce---eeeccccchheee
Confidence 45667788899999999999999999999999999999999999 9999999999999999988 9999999999999
Q ss_pred HHHHHHHH-Hhhccc-ccccchhh----HHHHHHHHHHHH--HHHhcCCccchHHHHHHHHHHHHHHHHHHhhc
Q 042300 454 LSLSVFLS-LVYFRH-LTWNFSAE----VSVILLVCILMG--LIASFRTTFPLWMCLVACMLYPFSLLLLYVLD 519 (520)
Q Consensus 454 l~l~v~l~-lv~~r~-l~w~fs~E----vlvillv~~~vg--~~~~~r~t~~~~~g~~~~~lY~~sl~lv~~l~ 519 (520)
+|+|+-.. ..+..+ -.+.++.. .+++++.++++. .+...+.+..++.|++++++|.+++++-++.+
T Consensus 1013 lgLGlPWlI~~li~g~~pV~V~S~GL~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiLiE 1086 (1096)
T TIGR00927 1013 VGLPVPWLLFSLINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLE 1086 (1096)
T ss_pred eeccHHHHHHHHhccCcceeecCccHHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHHHh
Confidence 99988311 111111 12223331 112222222222 12246779999999999999999998776654
No 10
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.82 E-value=1e-18 Score=182.14 Aligned_cols=142 Identities=17% Similarity=0.258 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhH
Q 042300 375 SILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNI 453 (520)
Q Consensus 375 ~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~ 453 (520)
+..+.++.=+++++..||-=+..+.+.+|||+..+|+++++-+| .|+++||++.|||+--|+| +|+=.|++++..+
T Consensus 427 vTFigSIlWIA~fSYLMVWwa~~iGeT~gIp~eIMGLTiLAAGTSIPDlitSvIVARKGlGDMA---VSsSiGSNiFDI~ 503 (588)
T KOG1307|consen 427 VTFIGSILWIAAFSYLMVWWANIIGETLGIPDEIMGLTILAAGTSIPDLITSVIVARKGLGDMA---VSSSIGSNIFDIL 503 (588)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcccccCCCHHHhhhhhhhcCCchHHhhHhhhhcccccccce---eecccccchhhee
Confidence 34556677789999999999999999999999999999999999 9999999999999999999 9999999999999
Q ss_pred HHHHH---HHHHhhc-cc-cccc-----chhhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHhhcC
Q 042300 454 LSLSV---FLSLVYF-RH-LTWN-----FSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLDD 520 (520)
Q Consensus 454 l~l~v---~l~lv~~-r~-l~w~-----fs~Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~~l~~ 520 (520)
.||++ +-.+++. ++ ...+ .+.-.+.+.++.++++.. ..|.+..+..|+.++.+|.+++++-..||+
T Consensus 504 VGLplPWLL~~lI~~~~~~i~vsS~GL~csi~lLf~ml~v~v~~ia-~~rWrMnK~lG~~m~llY~~Fl~~svmlE~ 579 (588)
T KOG1307|consen 504 VGLPLPWLLYTLIYGFKSKISVSSNGLVCSIGLLFAMLIVLVLGIA-LSRWRMNKILGFLMILLYFVFLIISVMLET 579 (588)
T ss_pred ecCCcHHHHHHHHhhcCCceeecCCceehHHHHHHHHHHHHHHHHH-HHhhhcccchhHHHHHHHHHHHHhhhheec
Confidence 98877 2223332 22 3322 232333333333334433 468889999999999999999887766653
No 11
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.74 E-value=1.7e-15 Score=168.88 Aligned_cols=140 Identities=12% Similarity=0.119 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCC--CccccccccchhhhHHH
Q 042300 374 VSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKR--SRTSSLTYSAIYGSVTM 450 (520)
Q Consensus 374 i~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k--~~~aslt~s~iygav~m 450 (520)
+.-.+.+++.+...|.-+|.-++.+..-+|||+.++|+++++.+. .+++++.+..|+++. +++| ++..||+-.+
T Consensus 486 ~~~f~~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dlian~~lA~~G~~~m~mA---~~a~~ggp~F 562 (650)
T PLN03151 486 LGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIA---MSGCYAGPMF 562 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHHHHHHHHHcCCchhHHH---HHHhhhhhHH
Confidence 344566677788899999999999999999999999999999999 999999999999995 4566 9999999999
Q ss_pred hhHHHHHHHHHHhh--cc--cccccchh--hHHHH-HHHHHHHHHHH--hcCCccchHHHHHHHHHHHHHHHHHH
Q 042300 451 SNILSLSVFLSLVY--FR--HLTWNFSA--EVSVI-LLVCILMGLIA--SFRTTFPLWMCLVACMLYPFSLLLLY 516 (520)
Q Consensus 451 nn~l~l~v~l~lv~--~r--~l~w~fs~--Evlvi-llv~~~vg~~~--~~r~t~~~~~g~~~~~lY~~sl~lv~ 516 (520)
|.++++|+-...-- .+ +.....+. ....+ ++.+++..++. ..|-+.+|..|..++.+|..+++...
T Consensus 563 ~il~glG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~~~R~~G~~li~~Y~~Fl~~~~ 637 (650)
T PLN03151 563 NTLVGLGMSMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRV 637 (650)
T ss_pred HHHHhccHHHHHHHhhcCCCceeecCCChHHHHHHHHHHHHHHHHHHHHHhCeeechhHHHHHHHHHHHHHHHHH
Confidence 99999988433221 11 22222211 22222 22223322222 24668888999999999998886543
No 12
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.50 E-value=3.1e-13 Score=140.28 Aligned_cols=137 Identities=19% Similarity=0.279 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHh
Q 042300 373 SVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMS 451 (520)
Q Consensus 373 ai~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mn 451 (520)
.+.++++|..++.+++|.+|++.+.+++++|+|+.++|.++++++| +||+++++.++++++.+++ +||+.|+++.|
T Consensus 4 ~~~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia---~GnilGSni~n 80 (325)
T PRK10734 4 ATALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLA---VGTALGSNITN 80 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcch---hhhhhhHHHHH
Confidence 4678899999999999999999999999999999999999999999 9999999999999999988 99999999999
Q ss_pred hHHHHHHHHHHhhcccccccc---hhhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHH
Q 042300 452 NILSLSVFLSLVYFRHLTWNF---SAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLY 516 (520)
Q Consensus 452 n~l~l~v~l~lv~~r~l~w~f---s~Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~ 516 (520)
..+.+++-.- .+|++.+. ..+...++.+++++..+ ..+.++++|+|.+++.+|..++...+
T Consensus 81 i~lilg~~~l---~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~~~~~l~~~~g~~ll~~~~~yl~~~~ 144 (325)
T PRK10734 81 ILLILGLAAL---IRPFTVHSDVLRRELPLMLLVSVLAGSV-LYDGQLSRSDGIFLLLLAVLWLLFIV 144 (325)
T ss_pred HHHHHHHHHH---hCCcccChHHHHHHHHHHHHHHHHHHHH-HHCCcCcHHHHHHHHHHHHHHHHHHH
Confidence 9888876532 24554443 23655555544444433 35678999999999999999876544
No 13
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.41 E-value=5.5e-13 Score=120.46 Aligned_cols=129 Identities=22% Similarity=0.348 Sum_probs=101.6
Q ss_pred HHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHHHHH
Q 042300 383 VAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLS 461 (520)
Q Consensus 383 lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v~l~ 461 (520)
++...|+.++++++.+++..|+|+.++|.+++|+++ +||.++++.+++|++.+++ ++++.|++.+|.++.+++...
T Consensus 2 ~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la---~~~~~Gs~~~~~~l~~gl~~l 78 (140)
T PF01699_consen 2 LIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLA---IGNIIGSNIFNITLIVGLILL 78 (140)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHH---HHHHHHHHHHHHHTHHHHHHH
T ss_pred EehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchh---hhcccchHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999 9999999999999998888 999999999999988877543
Q ss_pred Hhhcc----ccccc-chhhHHHHHHHHHHHHHHHh---cCCccchHHHHHHHHHHHHHHHH
Q 042300 462 LVYFR----HLTWN-FSAEVSVILLVCILMGLIAS---FRTTFPLWMCLVACMLYPFSLLL 514 (520)
Q Consensus 462 lv~~r----~l~w~-fs~Evlvillv~~~vg~~~~---~r~t~~~~~g~~~~~lY~~sl~l 514 (520)
....+ ..++. +..+...+++.+.++..+.. .+.+.++|+|++++.+|++++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 79 FGPIKLGSQTIDWSSFTRDFSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp HS-B---------HHHHHHHHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence 32222 12333 44466666666666665543 47899999999999999998865
No 14
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.37 E-value=6.9e-12 Score=129.36 Aligned_cols=138 Identities=20% Similarity=0.254 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhh
Q 042300 374 VSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSN 452 (520)
Q Consensus 374 i~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn 452 (520)
+..+++|.+++..++|.++++.+.+++++|+|+.++|.+++|++| +||.++++.++++++.+++ ++|+.|++.+|.
T Consensus 4 ~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la---~g~ilGS~l~n~ 80 (307)
T TIGR00367 4 IGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIG---VGNVIGSNIFNI 80 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCee---hhhhhhHHHHHH
Confidence 457788999999999999999999999999999999999999999 9999999999999998888 999999999999
Q ss_pred HHHHHHHHHHhhccccccc-chhhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHH
Q 042300 453 ILSLSVFLSLVYFRHLTWN-FSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLY 516 (520)
Q Consensus 453 ~l~l~v~l~lv~~r~l~w~-fs~Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~ 516 (520)
++++++..-. .....+.+ +.-|...+++.+.++..+. +..++++|+|.+++.+|++++...+
T Consensus 81 l~i~g~~~l~-~~~~~~~~~~~~d~~~~l~~~~~~~~~~-~~g~i~~~~gi~ll~~Yv~yl~~~~ 143 (307)
T TIGR00367 81 LLILGLSAIF-SPIIVDTDWLRRDFSFYLLVSILLLFFG-LDGPISRLDGVVLLFLYVVYLLFLV 143 (307)
T ss_pred HHHHHHHHhh-cceeechHHHHHHHHHHHHHHHHHHHHH-HhCcchHHHHHHHHHHHHHHHHHHH
Confidence 8888775322 11122222 5557777766666665554 4567999999999999999987665
No 15
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.32 E-value=2.7e-11 Score=125.50 Aligned_cols=139 Identities=23% Similarity=0.338 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHH
Q 042300 371 EVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVT 449 (520)
Q Consensus 371 ~~ai~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~ 449 (520)
+..+.++++|.+++..+||.+|++.+.++++.|+|++++|.++++++| +||..+++.++.+++.+++ +||+.|++.
T Consensus 9 ~~~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~ia---vGnvlGSni 85 (320)
T COG0530 9 LLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIA---VGNVLGSNI 85 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCee---eehhhhHHH
Confidence 456788999999999999999999999999999999999999999999 9999999999999999988 999999999
Q ss_pred HhhHHHHHHHHHHhhccccccc---chhhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHH
Q 042300 450 MSNILSLSVFLSLVYFRHLTWN---FSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLY 516 (520)
Q Consensus 450 mnn~l~l~v~l~lv~~r~l~w~---fs~Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~ 516 (520)
+|.++.+++.. ++ ++.+++ +.-|...+++++.++..+. ...+.++|.|+..+.+|..++...+
T Consensus 86 ~ni~li~gl~a-li--~~~~~~~~~~~r~~~f~ll~~~~~~~~~-~~~~~~~~~gi~ll~l~~~yl~~~~ 151 (320)
T COG0530 86 FNILLILGLAA-LI--APLKVDSDVLRREIPFLLLATLILLLVL-LDGHLSRLDGIVLLLLYVLYLYYLL 151 (320)
T ss_pred HHHHHHHHHHH-HH--hhhHhhhhHHHHhhHHHHHHHHHHHHHH-HcCCccHHHHHHHHHHHHHHHHHHH
Confidence 99998887643 22 233333 4448888888888887555 5778999999999999988886654
No 16
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.31 E-value=5.5e-12 Score=113.89 Aligned_cols=135 Identities=23% Similarity=0.421 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhHHHHHHHHHHH
Q 042300 89 LMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLWG 166 (520)
Q Consensus 89 lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS~i~nLtLi~G 166 (520)
++..+|++++++.|.+++++| +...|+++.|+.+++||.+..+.+.. +++.++++|+++||+++|+++.+|
T Consensus 2 ~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~-------~g~~~la~~~~~Gs~~~~~~l~~g 74 (140)
T PF01699_consen 2 LIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAAR-------KGNPDLAIGNIIGSNIFNITLIVG 74 (140)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHHHHTHHH
T ss_pred EehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhh-------ccccchhhhcccchHHHHHHHHHH
Confidence 467899999999999999877 78999999999999999999999999 667789999999999999999999
Q ss_pred HHHHhccccccCcccccCcceeeeeccCcccccccch-hhhhHHHHHHHHHHHHHhhhhhhcccccccccchhhHHHHHH
Q 042300 167 SCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWT-CYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSIS 245 (520)
Q Consensus 167 ~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~-~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~~is~ivsiv 245 (520)
++.++++.+.. ++.. |.+. .....+++...+.+.. ++..+ .....+++..+++
T Consensus 75 l~~l~~~~~~~---------~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~ 128 (140)
T PF01699_consen 75 LILLFGPIKLG---------SQTI---------DWSSFTRDFSFLLLAILLLIL--FFLAF------IRDGRISRFEGLV 128 (140)
T ss_dssp HHHHHS-B---------------------------HHHHHHHHHHHHHHHHHHH--CCT---------HCT-BSHHHHHH
T ss_pred HHHHhcccccc---------cccc---------ccchHHHHHHHHHHHHHHHHH--HHHHH------HcCCeEhHHHHHH
Confidence 99999998731 1111 1111 2333333333222221 22111 1123578999999
Q ss_pred HHHHHHHHHHH
Q 042300 246 LVIAYSIYQVF 256 (520)
Q Consensus 246 lLi~Y~~Yl~f 256 (520)
++..|++|+++
T Consensus 129 ll~~y~~y~~~ 139 (140)
T PF01699_consen 129 LLILYILYLVF 139 (140)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999986
No 17
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.29 E-value=1.5e-11 Score=138.66 Aligned_cols=132 Identities=18% Similarity=0.277 Sum_probs=107.4
Q ss_pred HHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHHH
Q 042300 381 TIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVF 459 (520)
Q Consensus 381 ~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v~ 459 (520)
.++...++|+||.+++.+++.+|+|+.++|.+++++++ +||++++++++.+++.+++ +|||.|++++|.++.+|+
T Consensus 469 v~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv~~g~sDIG---VGNIVGSnIFNILLVLGl- 544 (1096)
T TIGR00927 469 VALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVG---IGTIVGSAVFNILFVIGT- 544 (1096)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHHHcCCCcce---ehhhHhHHHHHHHHHHhh-
Confidence 45566788999999999999999999999999999999 9999999999999998888 999999999999988877
Q ss_pred HHHhhc--cccccc-chhhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHh
Q 042300 460 LSLVYF--RHLTWN-FSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYV 517 (520)
Q Consensus 460 l~lv~~--r~l~w~-fs~Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~~ 517 (520)
.+++.. .+++|. +.-|....++...++.++ .....+.+|+|++++++|+++++++++
T Consensus 545 ~aLis~~~l~Ld~~~L~RDllFyILAv~lLilf-~lDG~Itr~EgIILLlLYiiYVvvm~~ 604 (1096)
T TIGR00927 545 CALFSREILNLTWWPLFRDVSFYILDLMMLILF-FLDSLIAWWESLLLLLAYALYVFTMKW 604 (1096)
T ss_pred heeeccccccccccceehhHHHHHHHHHHHHHH-HhCCeEcHHHHHHHHHHHHHHHHHHHH
Confidence 333322 234544 333766666655554444 347789999999999999999988764
No 18
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.13 E-value=3.3e-10 Score=119.55 Aligned_cols=139 Identities=16% Similarity=0.172 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhH
Q 042300 79 NVFLIAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGS 156 (520)
Q Consensus 79 ~~fL~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS 156 (520)
.++.+++...++..+|++++++.+.+++.+| +.++|.++.|+.||+||.+.++.++. +++.++++|+++||
T Consensus 222 ~i~~l~~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~-------~g~~~lavg~~iGS 294 (365)
T TIGR00846 222 AAAWLVGATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAF-------KNKLDIALGVALGS 294 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHH-------cCCcchHHHHHHHH
Confidence 4566666777888999999999999999988 68999999999999999999999999 77888999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccc
Q 042300 157 TVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTV 236 (520)
Q Consensus 157 ~i~nLtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~ 236 (520)
|+.|++++.|.+.+++++.-. .-+-.|+. .+...+.++++.+. ..+. + .
T Consensus 295 ni~n~l~vl~~~~li~~~~~~-------~~~l~~~~------------~~~~~l~~s~~~~~-----~~~~---~----~ 343 (365)
T TIGR00846 295 ALQIALFVVPVVVLVAWMLGI-------PMDLNFGA------------PETVALALSVFLTT-----ITLQ---D----G 343 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcCC-------ceeccCcH------------HHHHHHHHHHHHHH-----HHHc---C----C
Confidence 999999999999999865310 01111111 22233333333222 1111 1 2
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 042300 237 LISLIVSISLVIAYSIYQV 255 (520)
Q Consensus 237 ~is~ivsivlLi~Y~~Yl~ 255 (520)
.+++..|++++..|++|..
T Consensus 344 ~~~~~eG~~ll~~Y~~~~~ 362 (365)
T TIGR00846 344 RSNYLEGAVLLALYIIIAM 362 (365)
T ss_pred cCcHHHHHHHHHHHHHHHH
Confidence 4789999999999999975
No 19
>PLN03151 cation/calcium exchanger; Provisional
Probab=98.86 E-value=2.9e-08 Score=111.39 Aligned_cols=131 Identities=9% Similarity=0.203 Sum_probs=103.3
Q ss_pred HHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHh-CCCccccccccchhhhHHHhhHHHHHHH
Q 042300 382 IVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASR-KRSRTSSLTYSAIYGSVTMSNILSLSVF 459 (520)
Q Consensus 382 ~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k-~k~~~aslt~s~iygav~mnn~l~l~v~ 459 (520)
.+...++|+++.+++.+|+.+++|+...|.+++++++ +||.++++.++.+ ++.+++ +|++.|+..+|.++.+|+.
T Consensus 153 ~L~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~---ig~ilGs~lf~~~vV~G~v 229 (650)
T PLN03151 153 LLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVG---LNSVLGGAVFVTCVVVGIV 229 (650)
T ss_pred HHHHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCcee---eehhhhHHHHHHHHHHHHH
Confidence 3446689999999999999999999999999999999 9999999987665 555665 9999999999999888775
Q ss_pred HHHhhccc--cccc-chhhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHH
Q 042300 460 LSLVYFRH--LTWN-FSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLY 516 (520)
Q Consensus 460 l~lv~~r~--l~w~-fs~Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~ 516 (520)
.-..-.++ +++. |--|+...++++.++..+ ...+++++|+|+.++.+|++++..+.
T Consensus 230 ~l~~~~~pf~v~~~~f~RD~~F~lla~~~l~~~-l~~g~v~~~eai~ll~lY~~Yv~vv~ 288 (650)
T PLN03151 230 SLCVADKEVQIDKRCFIRDLCFFLFTLVSLLVI-LMVGKVTVGGAIAFVSIYVVYAFLVA 288 (650)
T ss_pred HHhccCCceeecchhHHHhHHHHHHHHHHHHHH-HHcCeEhHHHHHHHHHHHHHHHHHHH
Confidence 43211122 3333 333777766666555433 45788999999999999999997765
No 20
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=98.85 E-value=2.4e-08 Score=114.50 Aligned_cols=142 Identities=12% Similarity=0.244 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCC-CccccccccchhhhHHH
Q 042300 373 SVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKR-SRTSSLTYSAIYGSVTM 450 (520)
Q Consensus 373 ai~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k-~~~aslt~s~iygav~m 450 (520)
.....+++++.+.+.+..+++.+..++..+|+|+.++|+++++++| +||+++++++|+|++ .++| +||+.|++++
T Consensus 755 g~~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~a---igNv~GSNif 831 (928)
T TIGR00845 755 GWACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADAS---IGNVTGSNAV 831 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCcee---EEeecchHHH
Confidence 4456667888889999999999999999999999999999999999 999999999999977 8888 9999999999
Q ss_pred hhHHHHHHHH--HHhh--cccccccc-----hhhHHHHHHHHHHH-HHHHhcCC----------ccchH-HHHHHHHHHH
Q 042300 451 SNILSLSVFL--SLVY--FRHLTWNF-----SAEVSVILLVCILM-GLIASFRT----------TFPLW-MCLVACMLYP 509 (520)
Q Consensus 451 nn~l~l~v~l--~lv~--~r~l~w~f-----s~Evlvillv~~~v-g~~~~~r~----------t~~~~-~g~~~~~lY~ 509 (520)
|..+++|+-. .-+| .++.++.. ..++.++++.+++. ..+..+|+ +-+.| ++...+.++.
T Consensus 832 Ni~l~lGv~~~i~~~~~~~~~~~~~V~~~~l~~~v~l~~~~a~l~~~vl~~rr~~~~g~elggp~~~~~~~~~~~~~lw~ 911 (928)
T TIGR00845 832 NVFLGIGVAWSIAAIYHAANGTQFKVSPGTLAFSVTLFTIFAFICIGVLLYRRRPEIGGELGGPRTAKLLTSALFVLLWL 911 (928)
T ss_pred HHHHHHHHHHHHhhhhhcccCceEEECccchhHHHHHHHHHHHHHHHHHHHhhcccccceeCCCCCcchhhhHHHHHHHH
Confidence 9999999832 2112 12222221 11444444444332 22223332 23333 4777777777
Q ss_pred HHHHHHHh
Q 042300 510 FSLLLLYV 517 (520)
Q Consensus 510 ~sl~lv~~ 517 (520)
+++++..+
T Consensus 912 ~y~~~s~l 919 (928)
T TIGR00845 912 LYILFSSL 919 (928)
T ss_pred HHHHHHHH
Confidence 77776553
No 21
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=98.84 E-value=1.9e-08 Score=105.69 Aligned_cols=139 Identities=12% Similarity=0.216 Sum_probs=106.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhH
Q 042300 79 NVFLIAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGS 156 (520)
Q Consensus 79 ~~fL~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS 156 (520)
.+.++++...++..+|++++++.+.+++.+| +.++|.++.|+.||+||.+..+.++. |++.++++|+++||
T Consensus 206 ~~~~L~~~~v~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~-------~~~~~~ai~~~~GS 278 (349)
T TIGR00378 206 STVVLLGTTVIVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAM-------KDKMDLALGVAIGS 278 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHH-------cCCcccHHHHHHhH
Confidence 4555667777899999999999999999988 67888889999999999999999998 77888999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccc
Q 042300 157 TVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTV 236 (520)
Q Consensus 157 ~i~nLtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~ 236 (520)
|+.|.+++.+..+++|-+--+ .-+-.|+ ..+...|+++++....+ +. +.
T Consensus 279 ~i~~~l~v~p~lvl~~~~~~~-------~~~L~f~------------~~~~~~l~~~v~~~~~~-----~~-------dg 327 (349)
T TIGR00378 279 SLQIALFVAPVLVIVGWMIDV-------PMTLNFS------------TFELVALFIAVLLSNYI-----SL-------DG 327 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-------CceecCc------------HHHHHHHHHHHHHHHHH-----Hh-------CC
Confidence 999999999998888865310 0111222 14555666665443311 11 12
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 042300 237 LISLIVSISLVIAYSIYQV 255 (520)
Q Consensus 237 ~is~ivsivlLi~Y~~Yl~ 255 (520)
..++..+..++..|+++.+
T Consensus 328 ~~n~leG~~ll~~Y~i~~~ 346 (349)
T TIGR00378 328 ESNWLEGVMLLAMYIIIAM 346 (349)
T ss_pred CCcHHHHHHHHHHHHHHHH
Confidence 4678999999999998853
No 22
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=98.73 E-value=9.4e-08 Score=109.75 Aligned_cols=89 Identities=16% Similarity=0.171 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCccccccc-ceeeehhhhhHH
Q 042300 81 FLIAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQ-VSVGMGLLAGST 157 (520)
Q Consensus 81 fL~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~-v~v~~G~l~GS~ 157 (520)
..+++....+...+..+++++..++..+| +.++|.++++++||+||++.+++++. |++ .++++||++|||
T Consensus 757 ~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~-------~~~~~d~aigNv~GSN 829 (928)
T TIGR00845 757 ACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAAT-------QDQYADASIGNVTGSN 829 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHH-------cCCCCceeEEeecchH
Confidence 34444455666788999999999999999 68999999999999999999999999 543 789999999999
Q ss_pred HHHHHHHHHHHHHhccccc
Q 042300 158 VMLLTVLWGSCLLVGKCDI 176 (520)
Q Consensus 158 i~nLtLi~G~~~ivG~~~~ 176 (520)
++|+++++|++.++.++..
T Consensus 830 ifNi~l~lGv~~~i~~~~~ 848 (928)
T TIGR00845 830 AVNVFLGIGVAWSIAAIYH 848 (928)
T ss_pred HHHHHHHHHHHHHHhhhhh
Confidence 9999999999999988763
No 23
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=98.65 E-value=3.6e-06 Score=93.56 Aligned_cols=136 Identities=14% Similarity=0.141 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhh
Q 042300 374 VSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSN 452 (520)
Q Consensus 374 i~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn 452 (520)
..-.+.+++.+...|.=+|.-++-+..-+|+|+.+.|+++.+-+- ...+++=+..|++++.++| ++-.||+-.+|.
T Consensus 449 ~~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniavak~G~p~MA---maac~GGplfn~ 525 (605)
T KOG2399|consen 449 ALGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVAKQGYPRMA---MAACIGGPLFNL 525 (605)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHHHcCcHHHH---HHHHhhhHHHHH
Confidence 345666778888899999999999999999999999999999999 9999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhh--ccccc---cc-ch-hhHHHHHHHHHHHHHHH--hcCCccchHHHHHHHHHHHHHH
Q 042300 453 ILSLSVFLSLVY--FRHLT---WN-FS-AEVSVILLVCILMGLIA--SFRTTFPLWMCLVACMLYPFSL 512 (520)
Q Consensus 453 ~l~l~v~l~lv~--~r~l~---w~-fs-~Evlvillv~~~vg~~~--~~r~t~~~~~g~~~~~lY~~sl 512 (520)
..++|+-..... ..+.+ |. -+ ..+...++++++...+. ..|-+.+|-.|+.+..+|..+.
T Consensus 526 lvg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~fL~i~l~~slv~~~~~~f~~~r~~gi~L~~lyi~f~ 594 (605)
T KOG2399|consen 526 LVGLGLPLVISSLQGKPGNIVIPEDNSLRITLIFLLIGLLTSLVLIPTNRFRLRRVLGIGLLSLYIAFT 594 (605)
T ss_pred HHHhhHHHHHHHHhcCCCceecccCCceehhHHHHHHHHHHHHHHHhcccceeccchhhHHHHHHHHHH
Confidence 988887332222 22222 21 11 13444444444433333 3566788889999999999883
No 24
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.12 E-value=2.3e-06 Score=90.81 Aligned_cols=127 Identities=15% Similarity=0.262 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHh
Q 042300 373 SVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMS 451 (520)
Q Consensus 373 ai~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mn 451 (520)
..++++++ ++.+|=|++|-+.+-+.+.+|||+-..|-+..+-++ +||+.|+++-.-=-|.|.. +|.|.|+.++|
T Consensus 63 g~iYmFvA--LAIVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFIt~~dVG---iGTIVGSAvFN 137 (588)
T KOG1307|consen 63 GLIYMFVA--LAIVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFITQGDVG---IGTIVGSAVFN 137 (588)
T ss_pred hHHHHHHH--HHHHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEEEecCCcc---eeeeeehhhhh
Confidence 55566654 557799999999999999999999999999999999 9999999997777777777 89999999999
Q ss_pred hHHHHHH---HH-------HHhhcccccccchhhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHH
Q 042300 452 NILSLSV---FL-------SLVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLL 513 (520)
Q Consensus 452 n~l~l~v---~l-------~lv~~r~l~w~fs~Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~ 513 (520)
.+..+|+ |. -|-.+|+..|+ ...+++-.+......+.+|++++++.+|..+.+
T Consensus 138 IL~Vig~C~LFSrqvl~LtWWPLfRD~sfY---------~lsl~~Li~Ff~D~~I~WwEaL~L~~~Yi~Yv~ 200 (588)
T KOG1307|consen 138 ILCVIGVCGLFSRQVLNLTWWPLFRDVSFY---------TLSLIMLIYFFLDELIMWWEALALLLMYISYVV 200 (588)
T ss_pred HHHHHHHHHhhcccccccccchhhhhhHHH---------HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhe
Confidence 8766665 21 13334444332 223333333346789999999999999988764
No 25
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=97.48 E-value=0.00081 Score=71.10 Aligned_cols=141 Identities=17% Similarity=0.185 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhHH
Q 042300 79 NVFLIAVYGYLMLLAAKLLSNGSEILLQIIG-PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGST 157 (520)
Q Consensus 79 ~~fL~~v~~~lL~~~A~lls~gse~La~~lg-~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS~ 157 (520)
...++++........|++++..-|...+.+| |-.+.|++.|+.+++||-+..+-++. ++|.+..++...||.
T Consensus 223 s~~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvIIaiv~~apE~~tAV~aA~-------kNkmq~slnialGSs 295 (366)
T PRK10599 223 HAIWLIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLVALLILSPEGLGALKAVL-------NNQVQRAMNLFFGSV 295 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHHHHHHcchhHHHHHHHHH-------cCchHHHHHHHHHHH
Confidence 4566777777888889999999999999999 55666787799999999999999998 788889999999999
Q ss_pred HHHHHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccch
Q 042300 158 VMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVL 237 (520)
Q Consensus 158 i~nLtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~~ 237 (520)
+.-..+.....+++|-+--+ .-+-.|+. ...-++.++++.-. + ... +..
T Consensus 296 Lq~illtvP~lvlig~~~g~-------pm~L~f~~------------~e~vlL~ltv~v~~---~----t~~-----dGr 344 (366)
T PRK10599 296 LATISLTVPVVTLIAFLTGN-------ELQFGLGA------------PEMVVMVASLVLCH---I----SFS-----TGR 344 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCC-------CeEecCCH------------HHHHHHHHHHHHHH---h----ccC-----CCc
Confidence 99999999999999866511 12222322 22223333322111 1 111 123
Q ss_pred hhHHHHHHHHHHHHHHHHHh
Q 042300 238 ISLIVSISLVIAYSIYQVFQ 257 (520)
Q Consensus 238 is~ivsivlLi~Y~~Yl~f~ 257 (520)
-+...+..++..|+.|.+..
T Consensus 345 sN~LeG~~hL~lf~~y~~l~ 364 (366)
T PRK10599 345 TNVLNGAAHLALFAAYLMTI 364 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999998753
No 26
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=96.26 E-value=0.035 Score=58.60 Aligned_cols=145 Identities=18% Similarity=0.281 Sum_probs=104.6
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeee
Q 042300 73 TTSLLGNVFLIAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGM 150 (520)
Q Consensus 73 ~~~~~g~~fL~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~ 150 (520)
.-+++-...++++.-.+....|++++..-|...+.+| |-++|-++.++-|+.||-+-.+-+++ +++.+.++
T Consensus 216 ~~s~~~s~~vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~-------~~~mqls~ 288 (368)
T COG0387 216 KWSVLLSTGVLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAAL-------NNRMQLSM 288 (368)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHH-------hccHHHHH
Confidence 3355556666677777888999999999999999999 67889999999999999999999999 78888889
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccc
Q 042300 151 GLLAGSTVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTS 230 (520)
Q Consensus 151 G~l~GS~i~nLtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~ 230 (520)
+.-.||.+.-..+....-.+++=.-- |++++.-. +.+.-.|+.+++..-+ .+ +
T Consensus 289 nia~Gsalq~~lltiP~lvlis~~~g-----------qpm~l~~~--------~~elV~l~~~v~~~~~-----~~--s- 341 (368)
T COG0387 289 NIAMGSALQTALLTIPVLVLISLFTG-----------QPLTLGFG--------PPELVLLVVTVFLANI-----LF--S- 341 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCccccCC--------HHHHHHHHHHHHHHHH-----hc--C-
Confidence 99999999888888777666654431 22222111 1333344444433221 11 1
Q ss_pred cccccchhhHHHHHHHHHHHHHHHH
Q 042300 231 ISRVTVLISLIVSISLVIAYSIYQV 255 (520)
Q Consensus 231 ~~~~~~~is~ivsivlLi~Y~~Yl~ 255 (520)
+..-++..+..++.+|.+|.+
T Consensus 342 ----dG~sn~leG~~lL~lya~~~~ 362 (368)
T COG0387 342 ----DGRTNWLEGVVLLALYAIYAM 362 (368)
T ss_pred ----CCchHHHHHHHHHHHHHHHHH
Confidence 124578899999999999865
No 27
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=95.50 E-value=0.015 Score=45.63 Aligned_cols=52 Identities=21% Similarity=0.407 Sum_probs=40.5
Q ss_pred HHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 301 IQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 301 ~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
+++.|+.+|.|+||.++.+|++..+...+........++.+..+++.+|+++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~ 53 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDG 53 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCC
Confidence 6789999999999999999999998877643322233455677888888776
No 28
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=94.53 E-value=0.21 Score=56.32 Aligned_cols=135 Identities=19% Similarity=0.240 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhHHHHHHHHHHHHH
Q 042300 91 LLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLWGSC 168 (520)
Q Consensus 91 ~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS~i~nLtLi~G~~ 168 (520)
+..|+=+..--+.+..++| |-+.|.++++..+|+-|++--+.-+. ||...+++|+..|+.++|++.-.|..
T Consensus 460 ~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniavak-------~G~p~MAmaac~GGplfn~lvg~G~~ 532 (605)
T KOG2399|consen 460 YLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVAK-------QGYPRMAMAACIGGPLFNLLVGLGLP 532 (605)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHHH-------cCcHHHHHHHHhhhHHHHHHHHhhHH
Confidence 3466666777777888887 77999999999999999999988888 77888999999999999999999999
Q ss_pred HHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccchhhHHHHHHHHH
Q 042300 169 LLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSISLVI 248 (520)
Q Consensus 169 ~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~~is~ivsivlLi 248 (520)
..+..+...+ . +... ..|+.-.+....+.++.+-.++. +|. .+ ..+.|..++.++.
T Consensus 533 ~~i~~~~~~~-------~-~~~~------~~~~~l~~~~~fL~i~l~~slv~-~~~-------~~--f~~~r~~gi~L~~ 588 (605)
T KOG2399|consen 533 LVISSLQGKP-------G-NIVI------PEDNSLRITLIFLLIGLLTSLVL-IPT-------NR--FRLRRVLGIGLLS 588 (605)
T ss_pred HHHHHHhcCC-------C-ceec------ccCCceehhHHHHHHHHHHHHHH-Hhc-------cc--ceeccchhhHHHH
Confidence 9987766321 0 0000 02333345555666665544322 222 11 2466888999999
Q ss_pred HHHHHHHH
Q 042300 249 AYSIYQVF 256 (520)
Q Consensus 249 ~Y~~Yl~f 256 (520)
.|+.|...
T Consensus 589 lyi~f~~~ 596 (605)
T KOG2399|consen 589 LYIAFTLI 596 (605)
T ss_pred HHHHHHHH
Confidence 99999433
No 29
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=93.51 E-value=0.057 Score=35.01 Aligned_cols=24 Identities=29% Similarity=0.565 Sum_probs=20.9
Q ss_pred HHhhhhhcccccCCcccHHHHHHH
Q 042300 301 IQKLFNIIDENADGCLSAKELRAL 324 (520)
Q Consensus 301 ~~~lF~~~d~~~d~~i~~~El~~l 324 (520)
|++.|+.+|.|+||.++.+|++.+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHH
Confidence 467899999999999999998764
No 30
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=93.46 E-value=0.062 Score=36.25 Aligned_cols=26 Identities=31% Similarity=0.690 Sum_probs=22.0
Q ss_pred HHhhhhhcccccCCcccHHHHHHHHh
Q 042300 301 IQKLFNIIDENADGCLSAKELRALVI 326 (520)
Q Consensus 301 ~~~lF~~~d~~~d~~i~~~El~~l~~ 326 (520)
+++.|+.+|.|+||.|+.+|++..+.
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 57899999999999999999987654
No 31
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=92.99 E-value=0.35 Score=41.23 Aligned_cols=54 Identities=22% Similarity=0.278 Sum_probs=37.6
Q ss_pred HHHHhhhhhcc-cccCC-cccHHHHHHHHhccccccc-ccchhHHHHHHHhhhcccc
Q 042300 299 DVIQKLFNIID-ENADG-CLSAKELRALVIGIQFEDI-DMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 299 ~~~~~lF~~~d-~~~d~-~i~~~El~~l~~~~~~~~~-~~~~~~~~~~~m~~fd~~~ 352 (520)
+.+++.|+.+| .|+|| .|+.+|++.++....-+.. ..+.++.++.+|+++|.++
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~ 66 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNK 66 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCC
Confidence 45667899998 67888 5999999998865321110 1123456888999998776
No 32
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=92.76 E-value=0.086 Score=35.47 Aligned_cols=25 Identities=20% Similarity=0.559 Sum_probs=21.9
Q ss_pred HHhhhhhcccccCCcccHHHHHHHH
Q 042300 301 IQKLFNIIDENADGCLSAKELRALV 325 (520)
Q Consensus 301 ~~~lF~~~d~~~d~~i~~~El~~l~ 325 (520)
++++|+.+|.|+||.|+.+|.+..+
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~ 26 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMM 26 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH
Confidence 5689999999999999999988654
No 33
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=92.72 E-value=0.16 Score=55.19 Aligned_cols=104 Identities=15% Similarity=0.193 Sum_probs=77.6
Q ss_pred ccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCccccc
Q 042300 66 TYGFLPCTTSLLGNVFLIAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQ 143 (520)
Q Consensus 66 ~yg~~Pc~~~~~g~~fL~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq 143 (520)
++-|+|=++--.|+.-.+ +....+-.....++|-+.......| +.+..-++++++||+||..-+-.|+.+ +
T Consensus 415 lFAfvPPt~~~~Gw~cFv-vsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~------d 487 (596)
T KOG1306|consen 415 LFAFVPPTEICHGWACFV-VSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQ------D 487 (596)
T ss_pred HeeeCCchhhcCccHHHH-HHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhh------c
Confidence 355666666556665433 3344445667788888888877777 667777899999999999999999883 3
Q ss_pred ccceeeehhhhhHHHHHHHHHHHHHHHhccccc
Q 042300 144 NQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDI 176 (520)
Q Consensus 144 ~~v~v~~G~l~GS~i~nLtLi~G~~~ivG~~~~ 176 (520)
...+-.+||+.|||-.|.-|-+|+.-.+..+..
T Consensus 488 ~~AD~~igNvTgSNaVNvflGiG~aW~iaavy~ 520 (596)
T KOG1306|consen 488 QTADASIGNVTGSNAVNVFLGIGLAWSIAAVYW 520 (596)
T ss_pred ccccccccceecccceeEEEeccHHHHHHHHHH
Confidence 334678999999999999888888777766653
No 34
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=92.59 E-value=0.19 Score=54.73 Aligned_cols=70 Identities=13% Similarity=0.254 Sum_probs=58.8
Q ss_pred chHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHH
Q 042300 387 CSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSV 458 (520)
Q Consensus 387 ~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v 458 (520)
..-..=|-.+.|.=..|+-+...+++.++++| .|..+.|-++|.+++-.=+ +++|+-|+++.|-.+++|+
T Consensus 441 ~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~--~igNvTgSNaVNvflGiG~ 511 (596)
T KOG1306|consen 441 LTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADA--SIGNVTGSNAVNVFLGIGL 511 (596)
T ss_pred HHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhcccccc--cccceecccceeEEEeccH
Confidence 33344466677777899999999999999999 9999999999988764333 4999999999999999887
No 35
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=92.49 E-value=1.5 Score=46.83 Aligned_cols=88 Identities=17% Similarity=0.337 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhH
Q 042300 79 NVFLIAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGS 156 (520)
Q Consensus 79 ~~fL~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS 156 (520)
.++.++..-.+.-..|+++++.-|...+..| +..+|-+++|+-||.-|-+-.+.-+. +++.++.+|.-.||
T Consensus 291 s~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~-------k~kldLslgVaigs 363 (441)
T KOG1397|consen 291 SIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAM-------KDKLDLSLGVAIGS 363 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeee-------cCcccchhhhhhhh
Confidence 4444444555566889999999999999977 78999999999999999998887777 78899999999999
Q ss_pred HHHHHHHHHHHHHHhcc
Q 042300 157 TVMLLTVLWGSCLLVGK 173 (520)
Q Consensus 157 ~i~nLtLi~G~~~ivG~ 173 (520)
.+=--+++...|+++|=
T Consensus 364 alQI~Lf~vP~~v~v~W 380 (441)
T KOG1397|consen 364 ALQIALFVVPFSVIVGW 380 (441)
T ss_pred hHhHHHhhhhHHHHhhh
Confidence 99999999999999983
No 36
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=91.21 E-value=0.29 Score=37.84 Aligned_cols=45 Identities=18% Similarity=0.311 Sum_probs=34.7
Q ss_pred HhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 302 QKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 302 ~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
++.|+.+|.|+||.++.+|++..+...++ .++..+++++.+|.++
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~------~~~~~~~i~~~~d~~~ 46 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL------PRSVLAQIWDLADTDK 46 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC------CHHHHHHHHHHhcCCC
Confidence 57899999999999999999988776553 2344677788887654
No 37
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=89.14 E-value=0.57 Score=39.51 Aligned_cols=53 Identities=19% Similarity=0.367 Sum_probs=39.1
Q ss_pred hHHHHhhhhhcc-cccCC-cccHHHHHHHHhc-cc--ccccccchhHHHHHHHhhhcccc
Q 042300 298 IDVIQKLFNIID-ENADG-CLSAKELRALVIG-IQ--FEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 298 ~~~~~~lF~~~d-~~~d~-~i~~~El~~l~~~-~~--~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
.+.+++.|+.+| .|++| .++.+|++.++.. ++ ++. .+.+++++.+++++|.++
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~--~~s~~~v~~i~~~~D~d~ 65 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDA--QKDADAVDKIMKELDENG 65 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccC--CCCHHHHHHHHHHHCCCC
Confidence 457889999997 99999 5999999999853 33 111 123456788999988765
No 38
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=88.28 E-value=0.79 Score=38.80 Aligned_cols=51 Identities=18% Similarity=0.326 Sum_probs=38.3
Q ss_pred hHHHHhhhhhcc-cccCC-cccHHHHHHHHhc-----ccccccccchhHHHHHHHhhhcccc
Q 042300 298 IDVIQKLFNIID-ENADG-CLSAKELRALVIG-----IQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 298 ~~~~~~lF~~~d-~~~d~-~i~~~El~~l~~~-----~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
...+++.|+.+| .|+|| .++.+|++.++.. .+. ...+++++.+|++.|.++
T Consensus 7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~----~~~~~~v~~~i~~~D~n~ 64 (88)
T cd05027 7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE----IKEQEVVDKVMETLDSDG 64 (88)
T ss_pred HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcC----CCCHHHHHHHHHHhCCCC
Confidence 346789999998 79999 5999999999865 331 123455888999887766
No 39
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=87.51 E-value=0.96 Score=41.64 Aligned_cols=52 Identities=21% Similarity=0.400 Sum_probs=40.3
Q ss_pred chHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 297 NIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 297 ~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
+.+.+++.|+.+|.|+||.|+.+|++..+...+-... +++.+.+++++|.++
T Consensus 83 ~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~----~~e~~~mi~~~d~d~ 134 (151)
T KOG0027|consen 83 SSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLT----DEECKEMIREVDVDG 134 (151)
T ss_pred cHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCC----HHHHHHHHHhcCCCC
Confidence 4668999999999999999999999998876653222 445677777777644
No 40
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=87.05 E-value=0.93 Score=38.50 Aligned_cols=48 Identities=19% Similarity=0.358 Sum_probs=37.5
Q ss_pred HHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 299 DVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 299 ~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
+.+++.|+.+|.|++|.++.+|++..+...++ + ++++.++++.+|.++
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~-----~-~~ev~~i~~~~d~~~ 57 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKSGL-----P-QTLLAKIWNLADIDN 57 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCC-----C-HHHHHHHHHHhcCCC
Confidence 46778999999999999999999998776543 2 244677888887654
No 41
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=86.59 E-value=0.95 Score=38.53 Aligned_cols=52 Identities=17% Similarity=0.264 Sum_probs=39.0
Q ss_pred hHHHHhhhhhccc-ccCCcccHHHHHHHHhc-ccccccccchhHHHHHHHhhhcccc
Q 042300 298 IDVIQKLFNIIDE-NADGCLSAKELRALVIG-IQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 298 ~~~~~~lF~~~d~-~~d~~i~~~El~~l~~~-~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
.+.+++.|+.+|. +++|.++.+|+|.++.. ++ +. ....++++.+|++.|.++
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg--~~-ls~~~~v~~mi~~~D~d~ 60 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLP--HL-LKDVEGLEEKMKNLDVNQ 60 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhh--hh-ccCHHHHHHHHHHhCCCC
Confidence 3467889999999 99999999999998876 44 11 111155788898888766
No 42
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=86.16 E-value=1.3 Score=36.78 Aligned_cols=54 Identities=20% Similarity=0.206 Sum_probs=37.6
Q ss_pred HHHHhhhhhccc--ccCCcccHHHHHHHHhc-ccccccccchhHHHHHHHhhhcccc
Q 042300 299 DVIQKLFNIIDE--NADGCLSAKELRALVIG-IQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 299 ~~~~~lF~~~d~--~~d~~i~~~El~~l~~~-~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
+.+++.|+.+|. |++|.++.+|++.++.. .+..-.....++.+..+++.||.++
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~ 64 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNK 64 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCC
Confidence 457788999999 89999999999988743 2210000123456788899887664
No 43
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=85.61 E-value=1.3 Score=41.81 Aligned_cols=52 Identities=23% Similarity=0.387 Sum_probs=41.4
Q ss_pred chHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 297 NIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 297 ~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
.+|.+++.|+-+|.|+||.|+.+|++...+.++..- .+++++++++++|.++
T Consensus 90 ~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~----~deev~~ll~~~d~d~ 141 (160)
T COG5126 90 KEEELREAFKLFDKDHDGYISIGELRRVLKSLGERL----SDEEVEKLLKEYDEDG 141 (160)
T ss_pred cHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccC----CHHHHHHHHHhcCCCC
Confidence 467899999999999999999999999887655321 2456788888888654
No 44
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=85.05 E-value=3.7 Score=34.66 Aligned_cols=51 Identities=20% Similarity=0.316 Sum_probs=35.5
Q ss_pred HHHhhhhhccc-cc-CCcccHHHHHHHHhc-ccccccccchhHHHHHHHhhhcccc
Q 042300 300 VIQKLFNIIDE-NA-DGCLSAKELRALVIG-IQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 300 ~~~~lF~~~d~-~~-d~~i~~~El~~l~~~-~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
.+=.+|+++|. |+ +|.++.+|++..+.. ...++. ..+++++++|++.|.++
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k--~t~~ev~~m~~~~D~d~ 64 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK--LQDAEIAKLMEDLDRNK 64 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHhcCCC
Confidence 45578999987 56 789999999998852 122222 13456788898887665
No 45
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=83.29 E-value=2.1 Score=38.33 Aligned_cols=48 Identities=25% Similarity=0.348 Sum_probs=37.2
Q ss_pred chHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 297 NIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 297 ~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
-++.++..|..+|.|+||.++.+|++++..+ +.+..+.++++.+|.++
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l~--------~~e~~~~~f~~~~D~n~ 93 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIRLD--------PNEHCIKPFFESCDLDK 93 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHcc--------chHHHHHHHHHHHCCCC
Confidence 3567889999999999999999999986511 22445677888888776
No 46
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=80.41 E-value=2.7 Score=35.54 Aligned_cols=52 Identities=17% Similarity=0.272 Sum_probs=36.3
Q ss_pred HHHHhhhhhccc-cc-CCcccHHHHHHHHhc-cc--ccccccchhHHHHHHHhhhcccc
Q 042300 299 DVIQKLFNIIDE-NA-DGCLSAKELRALVIG-IQ--FEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 299 ~~~~~lF~~~d~-~~-d~~i~~~El~~l~~~-~~--~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
..++..|+.+|. |+ ||.++.+|++.++.. .+ ++. + ..++++..+++++|.++
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~-~-~s~~ei~~~~~~~D~~~ 64 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKN-Q-KDPMAVDKIMKDLDQNR 64 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhc-c-ccHHHHHHHHHHhCCCC
Confidence 356788999987 86 699999999988653 11 111 1 12455788999988765
No 47
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=76.96 E-value=4.3 Score=37.27 Aligned_cols=50 Identities=20% Similarity=0.394 Sum_probs=40.4
Q ss_pred HHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 299 DVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 299 ~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
..+++.|..+|.|+||.++..|++..++.++.. +.+++...++++.|.++
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~----~t~~el~~~~~~~D~dg 57 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQN----PTEEELRDLIKEIDLDG 57 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC----CCHHHHHHHHHHhCCCC
Confidence 457789999999999999999999998877753 33456777888888775
No 48
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=72.43 E-value=7.9 Score=27.99 Aligned_cols=47 Identities=21% Similarity=0.430 Sum_probs=31.7
Q ss_pred HHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhccc
Q 042300 301 IQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHS 351 (520)
Q Consensus 301 ~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~ 351 (520)
+++.|..+|.|.+|.++.+|.+..+...+.. ..++....+++.+|.+
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~----~~~~~~~~~~~~~~~~ 48 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEG----LSEEEIDEMIREVDKD 48 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC----CCHHHHHHHHHHhCCC
Confidence 4577888899999999999988877654321 1233455566666543
No 49
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=71.44 E-value=6.7 Score=33.21 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=35.1
Q ss_pred HHHHhhhhh-cccccCC-cccHHHHHHHHhccc--ccccccchhHHHHHHHhhhcccc
Q 042300 299 DVIQKLFNI-IDENADG-CLSAKELRALVIGIQ--FEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 299 ~~~~~lF~~-~d~~~d~-~i~~~El~~l~~~~~--~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
+.+.+.|+. .|.|+|+ .++.+|++.++.... +.... ..+++++.+|+++|.++
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~-~~~~~~~~ll~~~D~d~ 65 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQ-KDPGVLDRMMKKLDLNS 65 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCC-CCHHHHHHHHHHcCCCC
Confidence 456788988 6677765 899999999865431 11111 12345778999887765
No 50
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=71.17 E-value=6.8 Score=37.12 Aligned_cols=52 Identities=19% Similarity=0.333 Sum_probs=39.4
Q ss_pred chHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 297 NIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 297 ~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
+.+.+++.|+-+|.|++|.|+..++|...+.++=.= .+++...+.+++|+++
T Consensus 104 t~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenl----tD~El~eMIeEAd~d~ 155 (172)
T KOG0028|consen 104 TKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENL----TDEELMEMIEEADRDG 155 (172)
T ss_pred cHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccc----cHHHHHHHHHHhcccc
Confidence 567899999999999999999999998766655100 2344566778888776
No 51
>PTZ00183 centrin; Provisional
Probab=70.44 E-value=8.8 Score=34.51 Aligned_cols=52 Identities=21% Similarity=0.330 Sum_probs=38.4
Q ss_pred chHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 297 NIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 297 ~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
.++.++.+|+.+|.|++|.++.+|++..+...+.. -.++++..+++.||.++
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~----l~~~~~~~~~~~~d~~~ 139 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELGET----ITDEELQEMIDEADRNG 139 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC----CCHHHHHHHHHHhCCCC
Confidence 45678899999999999999999999887644321 12344677888887554
No 52
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=69.67 E-value=4.7 Score=24.41 Aligned_cols=25 Identities=24% Similarity=0.647 Sum_probs=19.8
Q ss_pred HHhhhhhcccccCCcccHHHHHHHH
Q 042300 301 IQKLFNIIDENADGCLSAKELRALV 325 (520)
Q Consensus 301 ~~~lF~~~d~~~d~~i~~~El~~l~ 325 (520)
++++|+.+|.|++|.++.+|++..+
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~ 26 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLL 26 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHH
Confidence 4578888899999999888876543
No 53
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=63.92 E-value=12 Score=35.40 Aligned_cols=48 Identities=17% Similarity=0.448 Sum_probs=37.7
Q ss_pred HHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcc
Q 042300 299 DVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKH 350 (520)
Q Consensus 299 ~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~ 350 (520)
+.+++-|..+|.|+||.|+.+|+...++.+++.-. +.++.++++++|.
T Consensus 20 ~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s----~~ei~~l~~~~d~ 67 (160)
T COG5126 20 QELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPS----EAEINKLFEEIDA 67 (160)
T ss_pred HHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCc----HHHHHHHHHhccC
Confidence 45667788889999999999999999887765332 4557778888886
No 54
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=60.43 E-value=10 Score=28.18 Aligned_cols=29 Identities=24% Similarity=0.477 Sum_probs=24.7
Q ss_pred CchHHHHhhhhhcccccCCcccHHHHHHH
Q 042300 296 PNIDVIQKLFNIIDENADGCLSAKELRAL 324 (520)
Q Consensus 296 ~~~~~~~~lF~~~d~~~d~~i~~~El~~l 324 (520)
++++.++.+|..+|.|+||.++-+|...+
T Consensus 22 ~s~~e~~~l~~~~D~~~~G~I~~~EF~~~ 50 (54)
T PF13833_consen 22 LSEEEVDRLFREFDTDGDGYISFDEFISM 50 (54)
T ss_dssp SCHHHHHHHHHHHTTSSSSSEEHHHHHHH
T ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHHH
Confidence 56778999999999999999988876544
No 55
>PTZ00184 calmodulin; Provisional
Probab=59.63 E-value=16 Score=32.24 Aligned_cols=51 Identities=22% Similarity=0.376 Sum_probs=35.8
Q ss_pred hHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 298 IDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 298 ~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
++.++..|+.+|.|++|.++.+|++.++..++..- .++..+.+++.+|.++
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~----~~~~~~~~~~~~d~~~ 133 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKL----TDEEVDEMIREADVDG 133 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCC----CHHHHHHHHHhcCCCC
Confidence 45677899999999999999999988776544211 2344566777776544
No 56
>COG3462 Predicted membrane protein [Function unknown]
Probab=58.45 E-value=91 Score=27.76 Aligned_cols=22 Identities=18% Similarity=0.241 Sum_probs=13.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhh
Q 042300 237 LISLIVSISLVIAYSIYQVFQP 258 (520)
Q Consensus 237 ~is~ivsivlLi~Y~~Yl~f~~ 258 (520)
+++.+.+++.++..+++.++..
T Consensus 51 lImpI~~~vvli~lvvfm~~~~ 72 (117)
T COG3462 51 LIMPIFWAVVLIFLVVFMFYIL 72 (117)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666666666665543
No 57
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=54.25 E-value=18 Score=35.85 Aligned_cols=46 Identities=13% Similarity=0.325 Sum_probs=34.1
Q ss_pred HhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhccc
Q 042300 302 QKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHS 351 (520)
Q Consensus 302 ~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~ 351 (520)
|+.|+.+|.|+.|+|+.+|+|..+..+++.=. ++..+.+++.||..
T Consensus 127 r~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Ls----pq~~~~lv~kyd~~ 172 (221)
T KOG0037|consen 127 RNVFRTYDRDRSGTIDSSELRQALTQLGYRLS----PQFYNLLVRKYDRF 172 (221)
T ss_pred HHHHHhcccCCCCcccHHHHHHHHHHcCcCCC----HHHHHHHHHHhccc
Confidence 47888999999999999999998877764211 23345667778754
No 58
>PTZ00184 calmodulin; Provisional
Probab=54.23 E-value=22 Score=31.34 Aligned_cols=51 Identities=20% Similarity=0.427 Sum_probs=32.9
Q ss_pred hHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 298 IDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 298 ~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
.+.+++.|..+|.|++|.++.+|++.++.-.+.. ..++....+++.+|.++
T Consensus 10 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~----~~~~~~~~~~~~~d~~~ 60 (149)
T PTZ00184 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN----PTEAELQDMINEVDADG 60 (149)
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCC----CCHHHHHHHHHhcCcCC
Confidence 3456678888899999999999988775433321 11344566666665443
No 59
>PTZ00183 centrin; Provisional
Probab=50.33 E-value=31 Score=30.89 Aligned_cols=51 Identities=22% Similarity=0.446 Sum_probs=35.9
Q ss_pred hHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 298 IDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 298 ~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
...+++.|..+|.|++|.++.+|++..+...+... .++....+++.+|.++
T Consensus 16 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~----~~~~~~~l~~~~d~~~ 66 (158)
T PTZ00183 16 KKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEP----KKEEIKQMIADVDKDG 66 (158)
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCC----CHHHHHHHHHHhCCCC
Confidence 45677889999999999999999988776443211 1234566777776544
No 60
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=49.29 E-value=17 Score=28.01 Aligned_cols=26 Identities=27% Similarity=0.488 Sum_probs=21.3
Q ss_pred hHHHHhhhhhcccccCCcccHHHHHH
Q 042300 298 IDVIQKLFNIIDENADGCLSAKELRA 323 (520)
Q Consensus 298 ~~~~~~lF~~~d~~~d~~i~~~El~~ 323 (520)
++.++.+|+.+|.|+||.++-+|...
T Consensus 39 ~~~~~~~~~~~D~d~dG~i~~~Ef~~ 64 (66)
T PF13499_consen 39 DEMIDQIFREFDTDGDGRISFDEFLN 64 (66)
T ss_dssp HHHHHHHHHHHTTTSSSSEEHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCCCcHHHHhc
Confidence 34667889999999999998888654
No 61
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=48.04 E-value=83 Score=27.06 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=32.3
Q ss_pred HHHhhhhhcccccCCcccHHHHHHHH-hccc--ccccccchhHHHHHHHhhhcccc
Q 042300 300 VIQKLFNIIDENADGCLSAKELRALV-IGIQ--FEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 300 ~~~~lF~~~d~~~d~~i~~~El~~l~-~~~~--~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
.+-..|+++..+ ++.++..|+|.|+ ..++ +... ..++.++++|++.|.++
T Consensus 9 ~lI~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~~l~~~--~d~~~vd~im~~LD~n~ 61 (91)
T cd05024 9 KMMLTFHKFAGE-KNYLNRDDLQKLMEKEFSEFLKNQ--NDPMAVDKIMKDLDDCR 61 (91)
T ss_pred HHHHHHHHHcCC-CCcCCHHHHHHHHHHHhHHHHcCC--CCHHHHHHHHHHhCCCC
Confidence 445677777643 4579999999886 2333 2222 23456888999888766
No 62
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=47.56 E-value=20 Score=27.53 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=22.5
Q ss_pred CCCchHHHHhhhhhcccccCCcccHHHHHHH
Q 042300 294 GEPNIDVIQKLFNIIDENADGCLSAKELRAL 324 (520)
Q Consensus 294 g~~~~~~~~~lF~~~d~~~d~~i~~~El~~l 324 (520)
=+.|++..+.+|.+-|.+++|.+..+|...+
T Consensus 16 I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~F 46 (51)
T PF14788_consen 16 IEMDDEYARQLFQECDKSQSGRLEGEEFEEF 46 (51)
T ss_dssp ----HHHHHHHHHHH-SSSSSEBEHHHHHHH
T ss_pred cCcCHHHHHHHHHHhcccCCCCccHHHHHHH
Confidence 4567888999999999999999988876654
No 63
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=47.45 E-value=33 Score=28.71 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=34.4
Q ss_pred HHHHhhhhhcccc--cCCcccHHHHHHHHhc-ccccccccchhHHHHHHHhhhcccc
Q 042300 299 DVIQKLFNIIDEN--ADGCLSAKELRALVIG-IQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 299 ~~~~~lF~~~d~~--~d~~i~~~El~~l~~~-~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
+.+-..|++++.+ .++.|+.+|++.++.. .+-.-.....++.++.+++++|.++
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~ 64 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQ 64 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCC
Confidence 3455788888755 4678999999998752 2210001122456788899888665
No 64
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=46.17 E-value=3e+02 Score=28.21 Aligned_cols=60 Identities=8% Similarity=0.046 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhcchhHHHHHHHHH
Q 042300 371 EVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSSEAVSALIFAS 430 (520)
Q Consensus 371 ~~ai~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat~~E~vsAI~~A~ 430 (520)
.+.+..++.|..++..+...+.++++.+-+--..+...+++++..++..-+.+.+....+
T Consensus 78 ~E~l~~l~~~~~l~~~~~~~~~esi~~l~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~ 137 (299)
T PRK09509 78 AESLAALAQSMFISGSALFLFLTGIQHLISPTPMNDPGVGIIVTLVALICTLILVTFQRW 137 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 456777788888888888999999999976555555666666655554444444443333
No 65
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=45.93 E-value=28 Score=37.70 Aligned_cols=51 Identities=18% Similarity=0.342 Sum_probs=35.2
Q ss_pred hHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 298 IDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 298 ~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
|..+.+.|+++|.|.||++..+|+.+..+..+.. . .++++.+.++--|+++
T Consensus 81 E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~---l-~de~~~k~~e~~d~~g 131 (463)
T KOG0036|consen 81 ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQ---L-SDEKAAKFFEHMDKDG 131 (463)
T ss_pred HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCc---c-CHHHHHHHHHHhccCC
Confidence 3456689999999999999999999887655532 1 1233455555556666
No 66
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=41.79 E-value=39 Score=32.20 Aligned_cols=50 Identities=22% Similarity=0.401 Sum_probs=39.4
Q ss_pred HHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 299 DVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 299 ~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
..++.-|+-+|.+.+|.+..+|++-.....+|+.. .+++.+++.|+|+++
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~----k~ei~kll~d~dk~~ 82 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPK----KEEILKLLADVDKEG 82 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcc----hHHHHHHHHhhhhcc
Confidence 45677888889999999999999988877777543 345678888998855
No 67
>PLN02964 phosphatidylserine decarboxylase
Probab=38.50 E-value=44 Score=38.46 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=40.5
Q ss_pred CCchHH---HHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 295 EPNIDV---IQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 295 ~~~~~~---~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
.|.++. ++++|+.+|.|+||.++-+|..+++..++ +. +.+++.....+.||.++
T Consensus 172 ~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg--~~--~seEEL~eaFk~fDkDg 228 (644)
T PLN02964 172 DPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG--NL--VAANKKEELFKAADLNG 228 (644)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc--cC--CCHHHHHHHHHHhCCCC
Confidence 455654 78999999999999999999988876543 21 33455777888888776
No 68
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=36.71 E-value=57 Score=30.93 Aligned_cols=45 Identities=24% Similarity=0.471 Sum_probs=31.3
Q ss_pred HHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhh
Q 042300 299 DVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNR 347 (520)
Q Consensus 299 ~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~ 347 (520)
..+|.-|.-+|+|+||.|..+.+|+....++-. ..+++.+.+|++
T Consensus 32 qEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~----~~d~elDaM~~E 76 (171)
T KOG0031|consen 32 QEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKI----ASDEELDAMMKE 76 (171)
T ss_pred HHHHHHHHHHhccCCCcccHHHHHHHHHHcCCC----CCHHHHHHHHHh
Confidence 345667777899999999999999887766521 234445556554
No 69
>PRK03557 zinc transporter ZitB; Provisional
Probab=35.33 E-value=4.7e+02 Score=27.05 Aligned_cols=55 Identities=9% Similarity=0.149 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHchHHhHhhHHHHHhhcCCCcchhhhhhhhhhc-chhHHHHHH
Q 042300 371 EVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFAT-SSEAVSALI 427 (520)
Q Consensus 371 ~~ai~~Lllg~~lv~~~A~~lV~si~~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~ 427 (520)
.+.+..++.|..++..+...+.+++..+.....++. ...+ ++.+.+ ..+.+....
T Consensus 86 ~E~l~al~~~~~l~~~~~~i~~eai~~l~~~~~~~~-~~~~-~v~~~~~~~~~~~~~~ 141 (312)
T PRK03557 86 LTTLAAFVNAIALVVITILIVWEAIERFRTPRPVAG-GMMM-AIAVAGLLANILSFWL 141 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccc-hHHH-HHHHHHHHHHHHHHHH
Confidence 567788888888888899999999999876544442 2333 333444 555554443
No 70
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=34.29 E-value=21 Score=30.88 Aligned_cols=27 Identities=26% Similarity=0.205 Sum_probs=16.1
Q ss_pred CCCCcchhH-HHHHHHHhhCCCCccccc
Q 042300 1 MGKKPAFLL-LPFFFLALSGPAHTRARP 27 (520)
Q Consensus 1 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 27 (520)
|++|..++| +.|.++||++.+++.|-+
T Consensus 1 MaSK~~llL~l~LA~lLlisSevaa~~~ 28 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISSEVAAREL 28 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 888864333 334466777766566544
No 71
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=33.75 E-value=80 Score=30.00 Aligned_cols=48 Identities=21% Similarity=0.359 Sum_probs=35.8
Q ss_pred chHHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhh
Q 042300 297 NIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRL 348 (520)
Q Consensus 297 ~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~f 348 (520)
-+++|.+-|..+|+++.|.|.++.+|+++...+ ++. .+++++.+.+++
T Consensus 99 pe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~g-Dr~---~~eEV~~m~r~~ 146 (171)
T KOG0031|consen 99 PEEVILNAFKTFDDEGSGKIDEDYLRELLTTMG-DRF---TDEEVDEMYREA 146 (171)
T ss_pred HHHHHHHHHHhcCccCCCccCHHHHHHHHHHhc-ccC---CHHHHHHHHHhC
Confidence 478999999999999999999999999876654 111 234566665554
No 72
>PRK03612 spermidine synthase; Provisional
Probab=33.22 E-value=4.3e+02 Score=29.57 Aligned_cols=19 Identities=0% Similarity=0.046 Sum_probs=15.5
Q ss_pred cccchhhhHHHhhHHHHHH
Q 042300 440 TYSAIYGSVTMSNILSLSV 458 (520)
Q Consensus 440 t~s~iygav~mnn~l~l~v 458 (520)
++|.+|+.+++|+.++--+
T Consensus 146 ~~g~ly~~ntlGa~~G~l~ 164 (521)
T PRK03612 146 NVATVLAADYLGALVGGLA 164 (521)
T ss_pred hhhhhHhHHhHHHHHHHHH
Confidence 4899999999999877533
No 73
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=33.01 E-value=50 Score=27.91 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=26.9
Q ss_pred CCchHHHHhhhhhcccccCCcccHHHHHHHHhcc
Q 042300 295 EPNIDVIQKLFNIIDENADGCLSAKELRALVIGI 328 (520)
Q Consensus 295 ~~~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~ 328 (520)
+++.+.++++++..|.|+||.++-+|.-.++.++
T Consensus 49 ~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 49 QKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 3456788999999999999999988876665433
No 74
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=32.25 E-value=29 Score=33.28 Aligned_cols=40 Identities=15% Similarity=0.328 Sum_probs=34.1
Q ss_pred ccCCCCCchHHHHhhhhhcccccCCcccHHHHHHHHhccc
Q 042300 290 FTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQ 329 (520)
Q Consensus 290 ~~~~g~~~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~ 329 (520)
.+.+|.-..+.++++|.+++....+.++..|+..++.|..
T Consensus 87 YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr 126 (174)
T PF05042_consen 87 YDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNR 126 (174)
T ss_pred cccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhcc
Confidence 5678888899999999999988888899999988877643
No 75
>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1
Probab=31.75 E-value=6.3e+02 Score=26.59 Aligned_cols=26 Identities=27% Similarity=0.676 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhhh--hhhhHHHHHHhhh
Q 042300 247 VIAYSIYQVFQPW--IQKRRIEYAKQKQ 272 (520)
Q Consensus 247 Li~Y~~Yl~f~~~--~q~~rl~~~~~~~ 272 (520)
++.+.+|+....| +++||+++.|.++
T Consensus 238 ~~~~l~~~l~~Rwl~v~~RRLA~~Ra~~ 265 (340)
T PF12794_consen 238 LGWLLVYQLILRWLLVARRRLAYERAKE 265 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345556665555 7889998776543
No 76
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=30.19 E-value=58 Score=33.05 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=27.5
Q ss_pred cCCCCCc--hHHHHhhhhhcccccCCcccHHHHHHHH
Q 042300 291 TDDGEPN--IDVIQKLFNIIDENADGCLSAKELRALV 325 (520)
Q Consensus 291 ~~~g~~~--~~~~~~lF~~~d~~~d~~i~~~El~~l~ 325 (520)
+++.+|- .+.++.+|.+.|.|.|++++..|++.-+
T Consensus 91 DedaeprrsrrklmviFsKvDVNtDrkisAkEmqrwI 127 (362)
T KOG4251|consen 91 DEDAEPRRSRRKLMVIFSKVDVNTDRKISAKEMQRWI 127 (362)
T ss_pred ccccchhHHHHHHHHHHhhcccCccccccHHHHHHHH
Confidence 3444443 4678889999999999999999988654
No 77
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=29.84 E-value=79 Score=30.69 Aligned_cols=54 Identities=17% Similarity=0.335 Sum_probs=34.7
Q ss_pred HHHHhhhhhcccccCCcccHHHHHHHHhccc---ccccccchhHHHHHHHhhhcccc
Q 042300 299 DVIQKLFNIIDENADGCLSAKELRALVIGIQ---FEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 299 ~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~---~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
+.++=.|+-+|.|++|.|+.+|++..+.-+- ..+.+--.++-+++.+.++|.++
T Consensus 104 ~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~ 160 (187)
T KOG0034|consen 104 EKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDG 160 (187)
T ss_pred HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCC
Confidence 4555567778999999999999997754332 21101112233567788888776
No 78
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=28.52 E-value=93 Score=30.81 Aligned_cols=29 Identities=24% Similarity=0.464 Sum_probs=24.0
Q ss_pred HHHhhhhhcccccCCcccHHHHHHHHhcc
Q 042300 300 VIQKLFNIIDENADGCLSAKELRALVIGI 328 (520)
Q Consensus 300 ~~~~lF~~~d~~~d~~i~~~El~~l~~~~ 328 (520)
...+.|..+|.+.||.|+-.|+|.++--+
T Consensus 100 ~~~~~Fk~yDe~rDgfIdl~ELK~mmEKL 128 (244)
T KOG0041|consen 100 DAESMFKQYDEDRDGFIDLMELKRMMEKL 128 (244)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHHHh
Confidence 34578999999999999999999886433
No 79
>COG2860 Predicted membrane protein [Function unknown]
Probab=25.82 E-value=93 Score=30.80 Aligned_cols=71 Identities=17% Similarity=0.225 Sum_probs=46.5
Q ss_pred hhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHH--HHHHhhc-ccccccchhhHHHHHHHHHHHHH
Q 042300 413 ILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSV--FLSLVYF-RHLTWNFSAEVSVILLVCILMGL 488 (520)
Q Consensus 413 ivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v--~l~lv~~-r~l~w~fs~Evlvillv~~~vg~ 488 (520)
++=+.+ ..|.+|--..|.|+|+|+- |-.++...--+|- +==+..+ .|..|.=++|.+.+..++.++..
T Consensus 8 ~L~iiGi~afA~sGaL~A~r~~~Dif--------Gv~~la~vTAiGGGtiRDlLLG~~Pv~wv~~p~yl~~~~~~a~~~~ 79 (209)
T COG2860 8 WLDIIGIAAFAISGALAAGRRRMDIF--------GVLILAVVTAIGGGTIRDLLLGHYPVFWVKHPEYLLIAAVAAVLTF 79 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCee--------eehhHHHHHHhcchHHHHHHccCCCceeecCccHHHHHHHHHHHHH
Confidence 444566 8999999999999999987 7655555444432 1112223 68889888866666555555554
Q ss_pred HHh
Q 042300 489 IAS 491 (520)
Q Consensus 489 ~~~ 491 (520)
+..
T Consensus 80 ~~~ 82 (209)
T COG2860 80 FVA 82 (209)
T ss_pred HHH
Confidence 443
No 80
>PF14658 EF-hand_9: EF-hand domain
Probab=25.31 E-value=90 Score=25.29 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=33.1
Q ss_pred hhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300 303 KLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 303 ~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~ 352 (520)
..|+.+|.++.|.+..++++.++...+-. .+.|.+.+.+.++.|.++
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~---~p~e~~Lq~l~~elDP~g 48 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGR---SPEESELQDLINELDPEG 48 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCC---CCcHHHHHHHHHHhCCCC
Confidence 35778888999999888888887665531 134556677777777655
No 81
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=25.13 E-value=82 Score=34.11 Aligned_cols=28 Identities=29% Similarity=0.542 Sum_probs=23.5
Q ss_pred CCCchHHHHhhhhhcccccCCcccHHHH
Q 042300 294 GEPNIDVIQKLFNIIDENADGCLSAKEL 321 (520)
Q Consensus 294 g~~~~~~~~~lF~~~d~~~d~~i~~~El 321 (520)
+++-++.++.+|+.+|.|+||.++.+|+
T Consensus 329 ~~~~~~~l~~aF~~~D~dgdG~Is~~E~ 356 (391)
T PRK12309 329 GEAFTHAAQEIFRLYDLDGDGFITREEW 356 (391)
T ss_pred cChhhHHHHHHHHHhCCCCCCcCcHHHH
Confidence 4455678889999999999999998886
No 82
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=24.09 E-value=78 Score=28.25 Aligned_cols=27 Identities=26% Similarity=0.322 Sum_probs=21.8
Q ss_pred hHHHHhhhhhcccccCCcccHHHHHHH
Q 042300 298 IDVIQKLFNIIDENADGCLSAKELRAL 324 (520)
Q Consensus 298 ~~~~~~lF~~~d~~~d~~i~~~El~~l 324 (520)
++.++++|+..|.|+||.||.+|-...
T Consensus 79 e~~~~~f~~~~D~n~Dg~IS~~Ef~~c 105 (116)
T cd00252 79 EHCIKPFFESCDLDKDGSISLDEWCYC 105 (116)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 445567888899999999999987654
No 83
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=23.59 E-value=84 Score=26.15 Aligned_cols=30 Identities=33% Similarity=0.574 Sum_probs=24.5
Q ss_pred CchHHHHhhhhhcccccCCcccHHHHHHHH
Q 042300 296 PNIDVIQKLFNIIDENADGCLSAKELRALV 325 (520)
Q Consensus 296 ~~~~~~~~lF~~~d~~~d~~i~~~El~~l~ 325 (520)
|+++.++++|+.+|.|++|.++-+|...++
T Consensus 49 ~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~ 78 (92)
T cd05025 49 KDADAVDKIMKELDENGDGEVDFQEFVVLV 78 (92)
T ss_pred CCHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 567789999999999999999877766554
No 84
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=23.30 E-value=90 Score=26.23 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=26.5
Q ss_pred CCchHHHHhhhhhcccccCCcccHHHHHHHHhcc
Q 042300 295 EPNIDVIQKLFNIIDENADGCLSAKELRALVIGI 328 (520)
Q Consensus 295 ~~~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~ 328 (520)
.++++.++++++..|.|+||+++-+|.-.++.++
T Consensus 47 ~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 47 IKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3566779999999999999999888776655433
No 85
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=22.88 E-value=77 Score=26.54 Aligned_cols=34 Identities=26% Similarity=0.473 Sum_probs=27.1
Q ss_pred CchHHHHhhhhhcccccCCcccHHHHHHHHhccc
Q 042300 296 PNIDVIQKLFNIIDENADGCLSAKELRALVIGIQ 329 (520)
Q Consensus 296 ~~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~ 329 (520)
+.++.++++++.+|.|+||.++-+|...++.+..
T Consensus 48 ~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~ 81 (94)
T cd05031 48 KDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLS 81 (94)
T ss_pred ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 4566788999999999999999888876655444
No 86
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=22.15 E-value=1.1e+02 Score=29.83 Aligned_cols=55 Identities=16% Similarity=0.295 Sum_probs=36.0
Q ss_pred hHHHHhhhhhcccccCCcccHHHHHHHHhcccc--cc-----cccchhHHHHHHHhhhcccc
Q 042300 298 IDVIQKLFNIIDENADGCLSAKELRALVIGIQF--ED-----IDMNIDELLKKWLNRLKHSA 352 (520)
Q Consensus 298 ~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~--~~-----~~~~~~~~~~~~m~~fd~~~ 352 (520)
+|.++..|+-+|.|+||.|+.+|.=..+..+-. +. ..-..++.++++.+.+|.++
T Consensus 99 eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~ 160 (193)
T KOG0044|consen 99 EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNK 160 (193)
T ss_pred HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCC
Confidence 456678899999999999999887666544431 11 11113344667777777666
No 87
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=21.41 E-value=95 Score=26.69 Aligned_cols=33 Identities=18% Similarity=0.384 Sum_probs=26.7
Q ss_pred CchHHHHhhhhhcccccCCcccHHHHHHHHhcc
Q 042300 296 PNIDVIQKLFNIIDENADGCLSAKELRALVIGI 328 (520)
Q Consensus 296 ~~~~~~~~lF~~~d~~~d~~i~~~El~~l~~~~ 328 (520)
-|.+.++++++.-|.|+||+++=.|.=.++-++
T Consensus 45 ~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 45 NDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 367899999999999999999888766665443
No 88
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=20.42 E-value=1.1e+02 Score=25.74 Aligned_cols=29 Identities=28% Similarity=0.518 Sum_probs=23.4
Q ss_pred chHHHHhhhhhcccccCCcccHHHHHHHH
Q 042300 297 NIDVIQKLFNIIDENADGCLSAKELRALV 325 (520)
Q Consensus 297 ~~~~~~~lF~~~d~~~d~~i~~~El~~l~ 325 (520)
+.+.++++++..|.|+||+++-+|.-.++
T Consensus 50 ~~~~~~~ll~~~D~d~DG~I~f~EF~~l~ 78 (89)
T cd05023 50 DPGVLDRMMKKLDLNSDGQLDFQEFLNLI 78 (89)
T ss_pred CHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 45678899999999999999888765543
No 89
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=20.35 E-value=1.7e+03 Score=27.69 Aligned_cols=21 Identities=33% Similarity=0.953 Sum_probs=13.3
Q ss_pred HHHHHHHhhh--hhhhHHHHHHh
Q 042300 250 YSIYQVFQPW--IQKRRIEYAKQ 270 (520)
Q Consensus 250 Y~~Yl~f~~~--~q~~rl~~~~~ 270 (520)
+.+|.....| +++||++|-|-
T Consensus 714 ~l~y~~~~R~l~i~~RRlA~~Ra 736 (1109)
T PRK10929 714 LVVYHIIRRWMLIQRRRIAFDRA 736 (1109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455554444 88899877653
No 90
>KOG4770 consensus NADH dehydrogenase subunit 1 [Energy production and conversion]
Probab=20.21 E-value=3.4e+02 Score=28.02 Aligned_cols=68 Identities=28% Similarity=0.478 Sum_probs=40.6
Q ss_pred chhhhHHHhhHHHHHHHHHHhhccccccc--chhhHHH---HHHHHHHHHHHHhcCCccchH-----HHHHHHHHHHHHH
Q 042300 443 AIYGSVTMSNILSLSVFLSLVYFRHLTWN--FSAEVSV---ILLVCILMGLIASFRTTFPLW-----MCLVACMLYPFSL 512 (520)
Q Consensus 443 ~iygav~mnn~l~l~v~l~lv~~r~l~w~--fs~Evlv---illv~~~vg~~~~~r~t~~~~-----~g~~~~~lY~~sl 512 (520)
.=|++..+-|+++..+|++ +|. .+.|..- +.-..++...++..|+++||. +++.=-.+-|+|+
T Consensus 229 aeY~nli~ms~l~t~lflg-------gw~p~l~~elf~~~~~~k~~~~~fl~IwiR~t~PR~RyDqLM~L~Wk~fLpiSL 301 (315)
T KOG4770|consen 229 AEYANLIFMSVLSTVLFLG-------GWSPYLILELFSFIFIFKTFLILFLFIWIRSTYPRYRYDQLMSLGWKKFLPISL 301 (315)
T ss_pred HHHHHHHHHHHHHHHhccC-------CCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhHHHH
Confidence 3477788888888888776 222 1223333 333334455566789999987 3444445667787
Q ss_pred HHHHh
Q 042300 513 LLLYV 517 (520)
Q Consensus 513 ~lv~~ 517 (520)
.++.+
T Consensus 302 ~~L~~ 306 (315)
T KOG4770|consen 302 AMLLF 306 (315)
T ss_pred HHHHH
Confidence 66553
No 91
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=20.03 E-value=4.9e+02 Score=22.94 Aligned_cols=35 Identities=29% Similarity=0.429 Sum_probs=23.0
Q ss_pred HHHHHHHhcCCccchH-HHHHHHHHHHHHHHHHHhh
Q 042300 484 ILMGLIASFRTTFPLW-MCLVACMLYPFSLLLLYVL 518 (520)
Q Consensus 484 ~~vg~~~~~r~t~~~~-~g~~~~~lY~~sl~lv~~l 518 (520)
++=|..+.+|.+-+.| +|...-.+|.+-+.++.++
T Consensus 52 ~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~lis~~ 87 (116)
T PF12670_consen 52 FIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLISFL 87 (116)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444556666655 6999999998877766543
Done!