Query 042303
Match_columns 519
No_of_seqs 309 out of 1815
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 08:07:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042303.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042303hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 4.6E-73 1.6E-77 632.1 40.1 433 1-519 189-655 (656)
2 2xn4_A Kelch-like protein 2; s 100.0 8.3E-34 2.8E-38 284.7 29.0 270 9-373 15-302 (302)
3 1zgk_A Kelch-like ECH-associat 100.0 9.4E-34 3.2E-38 285.7 28.2 272 2-367 18-308 (308)
4 3ii7_A Kelch-like protein 7; p 100.0 1.1E-32 3.6E-37 277.1 27.1 252 49-369 25-295 (306)
5 2vpj_A Kelch-like protein 12; 100.0 1.8E-32 6E-37 274.6 27.3 267 9-367 14-299 (301)
6 1zgk_A Kelch-like ECH-associat 100.0 1.8E-31 6.3E-36 268.9 28.4 258 68-404 13-288 (308)
7 2xn4_A Kelch-like protein 2; s 100.0 3.7E-31 1.3E-35 265.3 26.2 251 77-404 13-277 (302)
8 3ii7_A Kelch-like protein 7; p 100.0 5.4E-31 1.8E-35 264.7 26.8 250 79-404 11-273 (306)
9 2woz_A Kelch repeat and BTB do 100.0 2.5E-31 8.5E-36 269.0 22.6 263 50-377 26-314 (318)
10 2vpj_A Kelch-like protein 12; 100.0 4.8E-30 1.6E-34 256.9 29.1 248 78-404 13-279 (301)
11 4asc_A Kelch repeat and BTB do 100.0 3.8E-31 1.3E-35 267.3 20.6 262 50-379 15-306 (315)
12 2uvk_A YJHT; unknown function, 100.0 6.7E-30 2.3E-34 262.2 23.9 261 62-381 2-327 (357)
13 4asc_A Kelch repeat and BTB do 100.0 5.9E-29 2E-33 251.2 20.9 249 79-404 4-278 (315)
14 2woz_A Kelch repeat and BTB do 100.0 2.6E-28 9E-33 246.7 22.6 249 79-404 15-288 (318)
15 1k3i_A Galactose oxidase precu 100.0 3.7E-28 1.3E-32 270.2 22.8 292 50-403 168-497 (656)
16 2uvk_A YJHT; unknown function, 100.0 4.9E-27 1.7E-31 240.9 23.5 274 2-356 13-352 (357)
17 2zwa_A Leucine carboxyl methyl 99.9 8.4E-25 2.9E-29 244.8 24.5 261 59-380 378-675 (695)
18 2zwa_A Leucine carboxyl methyl 99.9 2.8E-23 9.6E-28 232.5 21.7 240 8-320 396-675 (695)
19 4ery_A WD repeat-containing pr 97.8 0.0096 3.3E-07 57.9 26.1 245 50-379 47-299 (312)
20 3no2_A Uncharacterized protein 97.7 0.0028 9.6E-08 61.9 20.6 216 79-377 4-230 (276)
21 3dsm_A Uncharacterized protein 97.6 0.013 4.4E-07 58.3 24.2 270 48-402 17-301 (328)
22 3ow8_A WD repeat-containing pr 97.6 0.015 5E-07 57.6 24.5 244 50-380 60-311 (321)
23 1k8k_C P40, ARP2/3 complex 41 97.5 0.013 4.4E-07 57.9 22.3 91 49-144 31-123 (372)
24 3no2_A Uncharacterized protein 97.5 0.0091 3.1E-07 58.2 20.4 207 49-317 16-230 (276)
25 1gxr_A ESG1, transducin-like e 97.5 0.016 5.6E-07 56.1 22.0 246 49-380 73-327 (337)
26 1got_B GT-beta; complex (GTP-b 97.5 0.015 5.1E-07 57.7 22.0 249 49-381 78-334 (340)
27 3vgz_A Uncharacterized protein 97.5 0.062 2.1E-06 52.5 26.1 248 48-379 69-334 (353)
28 3zwl_B Eukaryotic translation 97.5 0.026 8.9E-07 55.3 23.3 273 50-381 56-337 (369)
29 1gxr_A ESG1, transducin-like e 97.4 0.014 4.6E-07 56.6 19.7 222 75-380 58-286 (337)
30 2pbi_B Guanine nucleotide-bind 97.4 0.081 2.8E-06 52.8 25.8 250 49-380 87-347 (354)
31 3bws_A Protein LP49; two-domai 97.3 0.029 9.9E-07 57.0 22.5 93 49-148 145-244 (433)
32 3hfq_A Uncharacterized protein 97.3 0.014 4.8E-07 57.7 18.7 94 48-144 18-113 (347)
33 1vyh_C Platelet-activating fac 97.3 0.027 9.4E-07 57.6 21.5 136 49-215 131-270 (410)
34 3vl1_A 26S proteasome regulato 97.1 0.022 7.4E-07 57.6 18.9 237 75-380 104-355 (420)
35 2ynn_A Coatomer subunit beta'; 97.1 0.064 2.2E-06 52.1 21.7 88 49-144 36-124 (304)
36 1l0q_A Surface layer protein; 97.1 0.12 4.2E-06 51.4 23.8 241 50-379 14-264 (391)
37 3vl1_A 26S proteasome regulato 97.1 0.16 5.6E-06 50.9 24.9 88 49-144 120-208 (420)
38 2pbi_B Guanine nucleotide-bind 97.0 0.11 3.9E-06 51.7 23.0 229 76-380 72-305 (354)
39 2z2n_A Virginiamycin B lyase; 97.0 0.23 8E-06 47.0 26.6 239 50-378 38-284 (299)
40 1got_B GT-beta; complex (GTP-b 97.0 0.24 8.1E-06 48.8 24.9 224 76-380 63-291 (340)
41 4ery_A WD repeat-containing pr 97.0 0.24 8.1E-06 47.8 23.9 223 76-381 31-259 (312)
42 3u4y_A Uncharacterized protein 97.0 0.26 8.9E-06 47.7 24.3 92 49-148 21-118 (331)
43 1erj_A Transcriptional repress 96.9 0.083 2.8E-06 53.5 21.3 112 74-217 129-245 (393)
44 4aez_A CDC20, WD repeat-contai 96.9 0.12 4E-06 52.3 22.0 252 49-380 114-370 (401)
45 3iz6_a 40S ribosomal protein R 96.9 0.36 1.2E-05 48.4 25.3 50 49-101 89-138 (380)
46 3dwl_C Actin-related protein 2 96.9 0.011 3.6E-07 59.0 13.5 68 75-148 18-87 (377)
47 4e54_B DNA damage-binding prot 96.8 0.52 1.8E-05 48.1 26.4 91 49-144 143-236 (435)
48 3ei3_B DNA damage-binding prot 96.8 0.26 8.9E-06 48.9 23.6 91 49-144 97-190 (383)
49 3v9f_A Two-component system se 96.8 0.8 2.7E-05 50.9 29.6 221 78-379 416-647 (781)
50 3dsm_A Uncharacterized protein 96.8 0.24 8.3E-06 48.9 22.6 187 91-344 15-213 (328)
51 3iz6_a 40S ribosomal protein R 96.7 0.24 8.1E-06 49.8 22.6 237 75-380 73-319 (380)
52 3ow8_A WD repeat-containing pr 96.7 0.44 1.5E-05 46.7 23.9 136 49-215 103-242 (321)
53 1rwi_B Serine/threonine-protei 96.7 0.4 1.4E-05 44.9 24.5 226 75-403 30-264 (270)
54 1l0q_A Surface layer protein; 96.7 0.16 5.4E-06 50.6 20.7 134 49-215 55-194 (391)
55 2aq5_A Coronin-1A; WD40 repeat 96.7 0.15 5.2E-06 51.3 20.7 232 75-379 88-333 (402)
56 3jrp_A Fusion protein of prote 96.7 0.041 1.4E-06 54.1 15.9 240 76-380 19-277 (379)
57 3scy_A Hypothetical bacterial 96.6 0.4 1.4E-05 47.3 23.3 94 48-144 29-125 (361)
58 2qc5_A Streptogramin B lactona 96.6 0.48 1.6E-05 44.8 26.6 239 51-378 44-290 (300)
59 2ynn_A Coatomer subunit beta'; 96.6 0.11 3.9E-06 50.3 18.7 223 76-381 21-250 (304)
60 2pm9_A Protein WEB1, protein t 96.6 0.33 1.1E-05 48.4 22.2 267 49-380 46-327 (416)
61 3sfz_A APAF-1, apoptotic pepti 96.6 0.22 7.4E-06 58.2 23.7 254 50-381 639-904 (1249)
62 1r5m_A SIR4-interacting protei 96.6 0.089 3.1E-06 52.5 17.9 24 189-212 255-280 (425)
63 1ri6_A Putative isomerase YBHE 96.6 0.3 1E-05 47.1 21.2 92 50-144 17-111 (343)
64 3dwl_C Actin-related protein 2 96.6 0.065 2.2E-06 53.2 16.7 89 50-144 35-127 (377)
65 1r5m_A SIR4-interacting protei 96.5 0.25 8.6E-06 49.1 21.0 62 75-144 115-176 (425)
66 3hfq_A Uncharacterized protein 96.5 0.25 8.4E-06 48.5 20.4 92 49-144 64-167 (347)
67 3jrp_A Fusion protein of prote 96.5 0.14 4.7E-06 50.3 18.5 89 50-144 35-130 (379)
68 1q7f_A NHL, brain tumor CG1071 96.5 0.61 2.1E-05 44.2 23.2 220 76-377 37-268 (286)
69 2ymu_A WD-40 repeat protein; u 96.4 0.23 8E-06 52.2 21.0 241 50-380 327-570 (577)
70 3mkq_A Coatomer beta'-subunit; 96.4 0.3 1E-05 53.9 22.1 88 49-144 36-124 (814)
71 3jro_A Fusion protein of prote 96.3 0.043 1.5E-06 61.1 15.2 241 77-381 18-276 (753)
72 3u4y_A Uncharacterized protein 96.3 0.71 2.4E-05 44.5 22.5 92 49-144 63-156 (331)
73 1ri6_A Putative isomerase YBHE 96.3 0.41 1.4E-05 46.1 20.7 93 49-144 61-156 (343)
74 3vgz_A Uncharacterized protein 96.3 0.67 2.3E-05 44.9 22.4 69 75-148 47-121 (353)
75 1nr0_A Actin interacting prote 96.3 0.7 2.4E-05 49.7 24.3 92 49-147 213-313 (611)
76 3sfz_A APAF-1, apoptotic pepti 96.3 0.28 9.6E-06 57.2 22.7 246 50-381 985-1240(1249)
77 2ovr_B FBW7, F-BOX/WD repeat p 96.3 0.69 2.3E-05 47.1 23.2 243 49-381 180-429 (445)
78 1k8k_C P40, ARP2/3 complex 41 96.3 0.054 1.8E-06 53.3 14.1 64 75-144 15-79 (372)
79 3i2n_A WD repeat-containing pr 96.3 0.61 2.1E-05 45.1 21.7 142 49-214 45-203 (357)
80 1pgu_A Actin interacting prote 96.3 0.26 8.8E-06 52.1 20.2 252 49-381 40-319 (615)
81 2ymu_A WD-40 repeat protein; u 96.3 0.81 2.8E-05 48.0 24.0 242 50-380 286-529 (577)
82 3odt_A Protein DOA1; ubiquitin 96.2 0.84 2.9E-05 43.1 22.2 90 49-144 40-129 (313)
83 3fm0_A Protein CIAO1; WDR39,SG 96.2 0.11 3.7E-06 51.5 15.9 190 70-320 18-215 (345)
84 3q7m_A Lipoprotein YFGL, BAMB; 96.1 1.3 4.4E-05 44.0 26.5 243 49-378 114-367 (376)
85 2hes_X YDR267CP; beta-propelle 96.1 0.19 6.4E-06 49.4 16.8 90 49-144 35-134 (330)
86 1rwi_B Serine/threonine-protei 96.0 0.98 3.3E-05 42.1 24.2 131 52-214 50-184 (270)
87 3scy_A Hypothetical bacterial 96.0 1.3 4.5E-05 43.4 22.8 26 188-213 217-245 (361)
88 2pm7_B Protein transport prote 96.0 1.1 3.6E-05 43.1 21.4 60 79-144 66-128 (297)
89 2pm7_B Protein transport prote 95.9 0.78 2.7E-05 44.1 20.2 69 76-150 17-89 (297)
90 4g56_B MGC81050 protein; prote 95.9 0.63 2.1E-05 46.3 20.0 67 75-147 101-170 (357)
91 3mmy_A MRNA export factor; mRN 95.9 1 3.4E-05 43.6 21.0 90 50-147 66-160 (368)
92 2xbg_A YCF48-like protein; pho 95.9 1.6 5.4E-05 43.1 24.4 75 288-379 193-269 (327)
93 1vyh_C Platelet-activating fac 95.8 0.64 2.2E-05 47.2 20.1 111 75-216 115-229 (410)
94 4gga_A P55CDC, cell division c 95.8 0.53 1.8E-05 47.7 19.4 87 49-144 126-214 (420)
95 3lrv_A PRE-mRNA-splicing facto 95.8 0.95 3.3E-05 44.3 20.7 111 75-212 132-246 (343)
96 3fm0_A Protein CIAO1; WDR39,SG 95.7 0.12 4.2E-06 51.1 13.8 142 190-381 70-216 (345)
97 4d9s_A UVB-resistance protein 95.7 0.49 1.7E-05 48.5 18.7 73 302-383 287-360 (406)
98 1nr0_A Actin interacting prote 95.6 2.2 7.4E-05 45.8 24.2 84 49-137 40-124 (611)
99 1yfq_A Cell cycle arrest prote 95.6 1.7 5.7E-05 41.8 21.2 87 50-144 35-127 (342)
100 3dm0_A Maltose-binding peripla 95.6 2.3 7.7E-05 46.3 24.5 63 74-144 436-499 (694)
101 3v7d_B Cell division control p 95.6 2.4 8.1E-05 43.1 24.2 103 189-344 318-422 (464)
102 3bws_A Protein LP49; two-domai 95.6 0.88 3E-05 45.7 19.8 137 49-217 192-341 (433)
103 1p22_A F-BOX/WD-repeat protein 95.5 2.5 8.6E-05 42.8 23.1 135 50-217 155-292 (435)
104 1jmx_B Amine dehydrogenase; ox 95.4 1.1 3.8E-05 43.1 19.4 140 50-217 23-182 (349)
105 3fvz_A Peptidyl-glycine alpha- 95.4 2.2 7.4E-05 41.7 25.5 151 49-217 70-234 (329)
106 3v7d_B Cell division control p 95.4 2.7 9.2E-05 42.6 23.8 134 188-378 275-410 (464)
107 4aez_A CDC20, WD repeat-contai 95.4 2.5 8.5E-05 42.3 22.3 87 49-144 157-244 (401)
108 3jro_A Fusion protein of prote 95.3 0.39 1.3E-05 53.3 17.4 90 49-144 32-128 (753)
109 4a11_B DNA excision repair pro 95.3 0.3 1E-05 48.3 15.0 66 74-144 49-127 (408)
110 3bg1_A Protein SEC13 homolog; 95.3 0.47 1.6E-05 46.2 16.1 68 77-150 22-93 (316)
111 3k26_A Polycomb protein EED; W 95.2 2.4 8.3E-05 40.8 22.1 91 49-144 96-188 (366)
112 4a2l_A BT_4663, two-component 95.2 5.1 0.00017 44.4 31.6 250 52-379 381-650 (795)
113 4gqb_B Methylosome protein 50; 95.1 1.2 4.2E-05 44.1 18.9 67 75-147 89-158 (344)
114 1sq9_A Antiviral protein SKI8; 95.1 1.1 3.6E-05 44.3 18.5 89 49-144 37-153 (397)
115 1nir_A Nitrite reductase; hemo 95.1 0.51 1.7E-05 50.4 16.9 91 49-147 160-257 (543)
116 2pm9_A Protein WEB1, protein t 95.1 2.9 0.0001 41.3 22.8 67 75-144 19-94 (416)
117 1erj_A Transcriptional repress 95.1 1.7 5.9E-05 43.5 20.0 91 49-147 146-238 (393)
118 4h5i_A Guanine nucleotide-exch 95.0 2.8 9.6E-05 41.6 21.4 58 306-381 276-334 (365)
119 3zwl_B Eukaryotic translation 95.0 0.45 1.6E-05 46.1 15.0 65 75-147 39-105 (369)
120 4g56_B MGC81050 protein; prote 94.9 1.2 4.2E-05 44.1 18.3 120 74-215 48-175 (357)
121 2ovr_B FBW7, F-BOX/WD repeat p 94.9 3.6 0.00012 41.6 24.2 239 49-380 140-381 (445)
122 4ggc_A P55CDC, cell division c 94.9 2 6.9E-05 40.6 19.0 82 49-138 46-129 (318)
123 3i2n_A WD repeat-containing pr 94.8 0.63 2.2E-05 45.0 15.5 66 76-144 26-95 (357)
124 3mkq_A Coatomer beta'-subunit; 94.8 0.98 3.3E-05 49.7 18.8 223 75-381 20-250 (814)
125 1nir_A Nitrite reductase; hemo 94.8 1.8 6.1E-05 46.1 20.0 110 76-218 145-265 (543)
126 2aq5_A Coronin-1A; WD40 repeat 94.6 3.9 0.00013 40.7 21.4 113 190-344 140-255 (402)
127 3frx_A Guanine nucleotide-bind 94.6 2.7 9.2E-05 40.7 19.6 136 49-215 88-232 (319)
128 4e54_B DNA damage-binding prot 94.6 3.9 0.00013 41.4 21.5 86 50-144 189-278 (435)
129 2z2n_A Virginiamycin B lyase; 94.6 3 0.0001 39.0 23.1 131 50-214 80-216 (299)
130 1sq9_A Antiviral protein SKI8; 94.5 1.3 4.3E-05 43.8 17.0 28 190-217 242-274 (397)
131 2dg1_A DRP35, lactonase; beta 94.3 3.9 0.00013 39.3 21.6 69 74-148 50-122 (333)
132 1q7f_A NHL, brain tumor CG1071 94.2 2.2 7.7E-05 40.1 17.6 139 185-379 79-226 (286)
133 3fvz_A Peptidyl-glycine alpha- 94.2 4.5 0.00015 39.4 27.8 223 94-379 70-311 (329)
134 2iwa_A Glutamine cyclotransfer 94.0 4.5 0.00015 39.0 19.0 186 120-380 24-227 (266)
135 1pgu_A Actin interacting prote 94.0 2.3 7.9E-05 44.6 18.6 68 70-144 20-93 (615)
136 3nol_A Glutamine cyclotransfer 93.9 4.8 0.00017 38.7 19.5 180 125-379 50-245 (262)
137 3odt_A Protein DOA1; ubiquitin 93.9 4.3 0.00015 38.1 19.9 60 78-144 27-86 (313)
138 3q7m_A Lipoprotein YFGL, BAMB; 93.7 5.8 0.0002 39.1 21.7 111 73-215 47-169 (376)
139 2ojh_A Uncharacterized protein 93.7 4.2 0.00014 37.4 21.4 82 48-136 22-104 (297)
140 3frx_A Guanine nucleotide-bind 93.7 4.2 0.00015 39.2 18.7 63 74-144 71-134 (319)
141 3k26_A Polycomb protein EED; W 93.6 1.2 4.2E-05 43.0 14.7 88 49-144 45-143 (366)
142 3ei3_B DNA damage-binding prot 93.5 6.2 0.00021 38.7 20.9 88 49-144 142-232 (383)
143 3bg1_A Protein SEC13 homolog; 93.1 1.8 6E-05 42.0 14.8 90 49-144 36-132 (316)
144 2vdu_B TRNA (guanine-N(7)-)-me 93.1 8.4 0.00029 39.0 23.8 64 75-144 109-176 (450)
145 4aow_A Guanine nucleotide-bind 92.9 6.5 0.00022 37.3 21.1 64 74-144 92-155 (340)
146 3dm0_A Maltose-binding peripla 92.9 7.2 0.00025 42.2 21.0 139 49-214 453-596 (694)
147 3mbr_X Glutamine cyclotransfer 92.4 7.6 0.00026 36.9 18.4 119 69-218 21-141 (243)
148 3gre_A Serine/threonine-protei 92.3 3.8 0.00013 41.1 16.6 65 74-144 69-138 (437)
149 1p22_A F-BOX/WD-repeat protein 92.3 5.2 0.00018 40.3 17.7 63 76-147 139-202 (435)
150 1pby_B Quinohemoprotein amine 91.7 9.1 0.00031 36.2 21.7 52 50-105 13-67 (337)
151 4aow_A Guanine nucleotide-bind 91.3 10 0.00034 36.0 18.1 26 189-214 223-250 (340)
152 2hqs_A Protein TOLB; TOLB, PAL 91.2 14 0.00046 37.3 21.6 59 306-381 317-375 (415)
153 2xzm_R RACK1; ribosome, transl 91.2 11 0.00039 36.4 23.9 62 75-144 83-145 (343)
154 4gga_A P55CDC, cell division c 91.2 13 0.00045 37.1 21.3 101 80-212 116-220 (420)
155 3mmy_A MRNA export factor; mRN 91.0 2 6.7E-05 41.4 12.2 64 75-144 46-113 (368)
156 1yfq_A Cell cycle arrest prote 91.0 11 0.00038 35.8 17.7 48 49-101 80-130 (342)
157 3f3f_A Nucleoporin SEH1; struc 90.9 11 0.00036 35.5 20.8 63 79-147 70-143 (351)
158 2ecf_A Dipeptidyl peptidase IV 90.9 20 0.00069 38.6 24.4 86 49-144 65-177 (741)
159 3mbr_X Glutamine cyclotransfer 90.7 12 0.00039 35.6 21.3 180 125-379 28-224 (243)
160 1pjx_A Dfpase, DIISOPROPYLFLUO 90.4 12 0.00041 35.2 18.8 68 76-146 25-100 (314)
161 3hrp_A Uncharacterized protein 90.2 17 0.00059 36.7 23.0 64 75-146 137-202 (409)
162 1jmx_B Amine dehydrogenase; ox 90.0 2.9 9.9E-05 40.1 12.4 27 191-217 9-37 (349)
163 3nok_A Glutaminyl cyclase; bet 89.8 15 0.0005 35.4 20.4 69 125-218 62-133 (268)
164 3e5z_A Putative gluconolactona 89.0 7.6 0.00026 36.7 14.5 136 49-212 91-248 (296)
165 2iwa_A Glutamine cyclotransfer 89.0 7.6 0.00026 37.4 14.3 34 185-218 23-61 (266)
166 3lrv_A PRE-mRNA-splicing facto 88.5 13 0.00046 35.8 16.2 91 49-147 150-244 (343)
167 2dg1_A DRP35, lactonase; beta 88.4 7.7 0.00026 37.2 14.3 84 50-135 68-153 (333)
168 2qc5_A Streptogramin B lactona 88.3 16 0.00054 33.9 24.3 107 75-214 26-137 (300)
169 1w8o_A Bacterial sialidase; 3D 88.2 13 0.00045 39.7 17.1 129 343-504 305-438 (601)
170 2ecf_A Dipeptidyl peptidase IV 88.0 20 0.00067 38.7 18.7 116 75-214 43-185 (741)
171 4h5i_A Guanine nucleotide-exch 87.8 14 0.00047 36.5 16.0 141 49-215 158-305 (365)
172 4a11_B DNA excision repair pro 87.6 21 0.00072 34.5 18.8 143 192-381 111-267 (408)
173 2xyi_A Probable histone-bindin 87.3 26 0.00088 35.1 19.1 65 74-144 134-209 (430)
174 2hqs_A Protein TOLB; TOLB, PAL 87.2 8.4 0.00029 38.9 14.2 83 49-136 204-286 (415)
175 3a72_A EXO-arabinanase; arabin 87.1 4.8 0.00016 40.5 12.0 172 181-376 22-221 (355)
176 3o4h_A Acylamino-acid-releasin 87.1 25 0.00084 36.8 18.4 50 307-380 253-302 (582)
177 1jof_A Carboxy-CIS,CIS-muconat 86.8 25 0.00084 34.4 18.7 49 48-100 16-67 (365)
178 2bkl_A Prolyl endopeptidase; m 86.5 39 0.0013 36.4 20.2 95 49-144 148-255 (695)
179 4gqb_B Methylosome protein 50; 86.0 8.2 0.00028 38.0 13.0 27 189-215 135-163 (344)
180 2vdu_B TRNA (guanine-N(7)-)-me 85.5 32 0.0011 34.5 23.4 140 50-217 127-278 (450)
181 1pby_B Quinohemoprotein amine 84.6 19 0.00066 33.8 14.7 62 81-148 2-66 (337)
182 2p9w_A MAL S 1 allergenic prot 83.6 21 0.00072 35.5 14.5 92 276-379 99-204 (334)
183 3nol_A Glutamine cyclotransfer 83.1 21 0.00071 34.2 13.8 30 189-218 49-82 (262)
184 2xbg_A YCF48-like protein; pho 82.2 27 0.00094 33.9 14.9 76 285-378 148-223 (327)
185 3mvd_K Regulator of chromosome 82.0 45 0.0016 33.6 18.8 66 309-383 260-325 (423)
186 3vu4_A KMHSV2; beta-propeller 81.3 41 0.0014 32.6 19.8 58 306-380 202-261 (355)
187 3f3f_A Nucleoporin SEH1; struc 79.1 8.9 0.0003 36.0 9.8 102 249-380 22-133 (351)
188 3g4e_A Regucalcin; six bladed 77.1 40 0.0014 31.8 14.0 26 189-214 61-86 (297)
189 4ggc_A P55CDC, cell division c 75.3 52 0.0018 30.4 19.1 62 78-147 35-98 (318)
190 3ott_A Two-component system se 73.7 1.1E+02 0.0036 33.3 23.6 132 191-379 481-617 (758)
191 3dr2_A Exported gluconolactona 73.3 28 0.00095 33.0 11.7 137 50-213 109-270 (305)
192 3nok_A Glutaminyl cyclase; bet 72.8 37 0.0013 32.6 12.1 29 189-217 61-91 (268)
193 2hes_X YDR267CP; beta-propelle 72.5 12 0.0004 36.2 8.8 100 249-381 118-221 (330)
194 3e5z_A Putative gluconolactona 70.5 68 0.0023 29.7 21.8 68 73-149 32-101 (296)
195 3tc9_A Hypothetical hydrolase; 69.2 54 0.0018 33.3 13.4 141 184-378 138-289 (430)
196 3hrp_A Uncharacterized protein 69.1 97 0.0033 31.0 17.6 31 184-214 132-165 (409)
197 3v9f_A Two-component system se 68.1 1E+02 0.0035 33.6 16.3 135 51-214 472-615 (781)
198 3vu4_A KMHSV2; beta-propeller 63.7 54 0.0018 31.8 11.7 61 306-379 247-325 (355)
199 3g4e_A Regucalcin; six bladed 62.1 45 0.0015 31.4 10.5 54 306-377 60-115 (297)
200 2oaj_A Protein SNI1; WD40 repe 61.7 2E+02 0.007 32.1 17.6 106 75-213 24-132 (902)
201 2ojh_A Uncharacterized protein 59.4 99 0.0034 27.7 12.3 92 48-144 62-156 (297)
202 3dw8_B Serine/threonine-protei 58.7 1.4E+02 0.0047 29.1 14.2 22 189-210 185-207 (447)
203 4d9s_A UVB-resistance protein 58.4 47 0.0016 33.4 10.3 74 302-383 235-308 (406)
204 2fp8_A Strictosidine synthase; 57.3 1.3E+02 0.0044 28.4 15.7 92 278-379 208-302 (322)
205 2ece_A 462AA long hypothetical 53.4 2.1E+02 0.0071 29.6 16.8 52 78-133 93-153 (462)
206 2fp8_A Strictosidine synthase; 53.3 1.5E+02 0.0051 27.9 12.9 57 306-379 191-248 (322)
207 2xyi_A Probable histone-bindin 53.3 1.8E+02 0.006 28.7 20.3 69 74-147 187-263 (430)
208 3sjl_D Methylamine dehydrogena 52.7 1.9E+02 0.0066 29.0 18.8 51 49-101 110-168 (386)
209 3dr2_A Exported gluconolactona 50.9 1.6E+02 0.0054 27.5 12.8 68 304-378 135-207 (305)
210 2xzm_R RACK1; ribosome, transl 50.4 71 0.0024 30.5 9.9 50 49-101 99-148 (343)
211 4hw6_A Hypothetical protein, I 50.0 1.8E+02 0.0061 29.4 13.2 32 184-215 140-176 (433)
212 4a2l_A BT_4663, two-component 49.5 2.9E+02 0.0098 30.0 20.6 135 51-214 430-575 (795)
213 2ad6_A Methanol dehydrogenase 44.8 3E+02 0.01 28.9 15.9 27 189-215 59-90 (571)
214 3gre_A Serine/threonine-protei 44.0 65 0.0022 31.7 8.6 99 249-381 181-283 (437)
215 3c5m_A Oligogalacturonate lyas 43.9 99 0.0034 29.6 9.8 55 50-108 266-334 (396)
216 3kci_A Probable E3 ubiquitin-p 43.4 39 0.0013 33.7 6.8 18 118-135 326-343 (389)
217 1pjx_A Dfpase, DIISOPROPYLFLUO 43.1 1.1E+02 0.0038 28.2 9.8 56 306-379 77-136 (314)
218 1w6s_A Methanol dehydrogenase 42.8 3.2E+02 0.011 29.0 14.2 27 189-215 59-90 (599)
219 3o4h_A Acylamino-acid-releasin 42.5 22 0.00075 37.2 4.9 88 50-144 177-272 (582)
220 3hxj_A Pyrrolo-quinoline quino 42.4 2.1E+02 0.0071 26.4 19.4 20 190-209 145-165 (330)
221 3dw8_B Serine/threonine-protei 42.3 1.1E+02 0.0036 30.0 9.9 62 74-144 291-369 (447)
222 2jkb_A Sialidase B; intramolec 41.4 3.7E+02 0.013 29.2 14.6 39 339-377 617-657 (686)
223 1yiq_A Quinohemoprotein alcoho 41.1 1.3E+02 0.0044 32.6 11.0 98 249-379 70-176 (689)
224 2z3z_A Dipeptidyl aminopeptida 41.1 3.4E+02 0.012 28.5 17.0 82 49-136 285-375 (706)
225 4hw6_A Hypothetical protein, I 40.8 3E+02 0.01 27.7 21.1 48 80-135 153-200 (433)
226 2vov_A MOPE, surface-associate 39.9 35 0.0012 30.8 4.9 35 478-518 276-331 (336)
227 1kv9_A Type II quinohemoprotei 38.3 1.3E+02 0.0044 32.4 10.4 98 249-379 66-171 (668)
228 3ott_A Two-component system se 36.8 4.2E+02 0.015 28.4 14.7 125 51-210 496-626 (758)
229 2p4o_A Hypothetical protein; p 36.8 1.5E+02 0.005 27.9 9.6 59 304-377 76-134 (306)
230 2p4o_A Hypothetical protein; p 36.7 1.3E+02 0.0045 28.2 9.2 57 74-133 77-133 (306)
231 3of7_A Regulator of chromosome 36.6 80 0.0027 32.4 8.0 18 118-135 386-403 (473)
232 3mvd_K Regulator of chromosome 35.9 55 0.0019 32.9 6.5 74 302-383 304-377 (423)
233 1qks_A Cytochrome CD1 nitrite 35.7 4.1E+02 0.014 27.9 19.8 110 78-218 165-283 (567)
234 3azo_A Aminopeptidase; POP fam 35.6 2.2E+02 0.0077 29.7 11.7 58 49-109 266-331 (662)
235 1k32_A Tricorn protease; prote 35.3 1.2E+02 0.0043 34.2 10.1 84 49-136 401-491 (1045)
236 3pe7_A Oligogalacturonate lyas 34.5 86 0.0029 30.1 7.6 58 50-108 266-334 (388)
237 1kb0_A Quinohemoprotein alcoho 34.4 1.5E+02 0.0051 32.0 10.1 98 249-379 77-183 (677)
238 2z3z_A Dipeptidyl aminopeptida 33.8 4.4E+02 0.015 27.6 25.7 87 49-136 142-277 (706)
239 3azo_A Aminopeptidase; POP fam 33.4 2.2E+02 0.0074 29.8 11.1 92 49-144 218-319 (662)
240 2ghs_A AGR_C_1268P; regucalcin 33.1 2E+02 0.0068 27.2 10.0 54 306-377 96-151 (326)
241 1flg_A Protein (quinoprotein e 33.0 2.5E+02 0.0085 29.6 11.4 119 189-348 65-195 (582)
242 3pe7_A Oligogalacturonate lyas 31.6 1.6E+02 0.0054 28.1 9.0 53 49-105 61-113 (388)
243 2w18_A PALB2, fancn, partner a 31.2 4E+02 0.014 26.4 13.2 26 192-217 192-219 (356)
244 2ad6_A Methanol dehydrogenase 26.8 1.8E+02 0.0062 30.6 8.9 97 249-378 62-168 (571)
245 2qe8_A Uncharacterized protein 25.8 89 0.0031 30.0 5.9 57 306-380 254-311 (343)
246 2ghs_A AGR_C_1268P; regucalcin 24.8 3.2E+02 0.011 25.8 9.7 75 50-133 73-150 (326)
247 1cru_A Protein (soluble quinop 24.5 1.9E+02 0.0064 29.5 8.3 16 2-18 31-46 (454)
248 3a72_A EXO-arabinanase; arabin 23.5 88 0.003 31.0 5.4 67 303-377 26-104 (355)
249 1kv9_A Type II quinohemoprotei 23.3 5.7E+02 0.02 27.2 12.3 26 189-214 63-91 (668)
250 3qhy_B Beta-lactamase inhibito 23.1 1.5E+02 0.0052 28.0 6.8 92 2-134 152-243 (282)
251 3tc9_A Hypothetical hydrolase; 22.7 2.3E+02 0.008 28.4 8.6 60 70-134 227-288 (430)
252 1jof_A Carboxy-CIS,CIS-muconat 22.3 3.2E+02 0.011 26.0 9.2 49 49-99 168-221 (365)
253 1qks_A Cytochrome CD1 nitrite 22.2 2E+02 0.0068 30.4 8.1 49 278-342 178-226 (567)
254 3kci_A Probable E3 ubiquitin-p 22.2 1.1E+02 0.0036 30.5 5.7 74 302-383 275-348 (389)
255 2oiz_A Aromatic amine dehydrog 22.2 3.4E+02 0.012 26.1 9.4 73 49-129 287-360 (361)
256 2j04_A TAU60, YPL007P, hypothe 22.0 1.4E+02 0.0047 32.0 6.7 66 72-144 133-207 (588)
257 1kb0_A Quinohemoprotein alcoho 21.7 7.5E+02 0.026 26.3 14.9 27 189-215 74-103 (677)
258 2j04_A TAU60, YPL007P, hypothe 20.5 1.2E+02 0.004 32.6 5.7 57 307-381 93-151 (588)
259 1w6s_A Methanol dehydrogenase 20.2 2.9E+02 0.01 29.3 9.0 97 249-378 62-174 (599)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=4.6e-73 Score=632.07 Aligned_cols=433 Identities=21% Similarity=0.330 Sum_probs=334.8
Q ss_pred CeeeeeCC-CCEEEEEecccccccCcCCCCCCCCccccCCCCCCCccceeEEEEECCCCcEEECccC---CCcccCCCee
Q 042303 1 MHAILLPK-VNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQ---TDTWCSSGGL 76 (519)
Q Consensus 1 ~h~~ll~~-~g~vl~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~---~~~~c~~~~~ 76 (519)
.|++++ + +||||++||.... .. |+ .........+|||.+++|+.+..+ ...+|+++++
T Consensus 189 ~~~av~-~~~g~l~v~GG~~~~--~~----~~-----------~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~ 250 (656)
T 1k3i_A 189 AAAAIE-PTSGRVLMWSSYRND--AF----GG-----------SPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM 250 (656)
T ss_dssp SEEEEE-TTTTEEEEEEECCCT--TT----CS-----------CCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE
T ss_pred eeEEEE-ecCCEEEEEeccccc--cc----cc-----------CCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccC
Confidence 378888 7 9999999996521 11 10 001234678999999999988765 4668888888
Q ss_pred ccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCC-CC----CceEEe-CCCCCC
Q 042303 77 TVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGR-GA----FSYEYI-PPQGQS 150 (519)
Q Consensus 77 l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~-~~----~~~E~y-P~~~~w 150 (519)
+.||+||++||... .++++|||. +++|+++++ |+.+||+|++++++||+|||+||. +. .++|+| |.+++|
T Consensus 251 ~~~g~lyv~GG~~~--~~v~~yd~~-t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 251 DGNGQIVVTGGNDA--KKTSLYDSS-SDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp CTTSCEEEECSSST--TCEEEEEGG-GTEEEECCC-CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred CCCCCEEEeCCCCC--CceEEecCc-CCceeECCC-CCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 99999999999763 379999999 899999985 999999999999999999999995 32 578999 999988
Q ss_pred CCcc--cccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-----------ceEEeeCCCCeEEEEc
Q 042303 151 NKQS--IYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-----------RSILFDPKANRVIREY 217 (519)
Q Consensus 151 ~~~~--~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-----------~~~~yDp~t~~w~~~~ 217 (519)
.... ...|++..... +.+..+++||++||. ..++||+.+++|+..+
T Consensus 327 ~~~~~~~~~p~~~~~~~---------------------~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~ 385 (656)
T 1k3i_A 327 TSLPNAKVNPMLTADKQ---------------------GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA 385 (656)
T ss_dssp EEETTSCSGGGCCCCTT---------------------GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE
T ss_pred eeCCCcccccccccccc---------------------ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecC
Confidence 5210 01233321100 112245566666542 3689999999998544
Q ss_pred cCCCCCC--CccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCce---EEEEecCCCCceE
Q 042303 218 PVLTGGS--RNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDC---GRIRITEPNPVWK 292 (519)
Q Consensus 218 p~~p~~~--r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~---~~~d~~~~~~~W~ 292 (519)
...+... ...+.+++++|++. .+++||++||.+.... ..+++.| ++||+. +++|+
T Consensus 386 ~~~~~~~~~~~~~~~~~av~~~~---------~~~~i~v~GG~~~~~~---------~~~~~~~~~v~~yd~~--~~~W~ 445 (656)
T 1k3i_A 386 GKRQSNRGVAPDAMCGNAVMYDA---------VKGKILTFGGSPDYQD---------SDATTNAHIITLGEPG--TSPNT 445 (656)
T ss_dssp EECEETTEECCCCBTCEEEEEET---------TTTEEEEECCBSSSSS---------SBCCCCEEEEECCSTT--SCCEE
T ss_pred CccccccccCCCCCCCceEeccC---------CCCeEEEEeCCCCCCC---------CCcCCcceEEEcCCCC--CCCee
Confidence 3222100 01244678888763 3899999999752110 1345544 445554 67898
Q ss_pred ec---cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcC
Q 042303 293 KE---MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLP 369 (519)
Q Consensus 293 ~~---~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~Llp 369 (519)
.. +|+.+|.+|++++++||+|||+||...+. ++. +..++.++|+|||+++ +|+.+++|+++|.|||+++||+
T Consensus 446 ~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~~hs~a~ll~ 520 (656)
T 1k3i_A 446 VFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLP 520 (656)
T ss_dssp EECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEECT
T ss_pred EEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCCCCCccccccHhhcCC
Confidence 64 89999999999999999999999986442 222 3456778999999999 9999999999999999999999
Q ss_pred CCcEEEecCCCCCCCccCCCCCceeeEEEEcCCCCCC--ccCCCCCceecCCCCCccccCceEEEEEEeccccccceEEE
Q 042303 370 DGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDP--ALAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRI 447 (519)
Q Consensus 370 dG~V~v~GG~~~~~~~~~~~~p~~~~vEiy~Ppyl~~--~~~~~RP~i~~~~~p~~~~~g~~~~v~~~~~~~~~~~~~~v 447 (519)
||+|||+||+.++.+. ++++++|+|+||||+. +..+.||+|++.. |+++.||++|+|+++. .+.+|
T Consensus 521 dg~v~v~GG~~~~~~~-----~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~-~~~~~~g~~~~~~~~~------~~~~~ 588 (656)
T 1k3i_A 521 DGRVFNGGGGLCGDCT-----TNHFDAQIFTPNYLYNSNGNLATRPKITRTS-TQSVKVGGRITISTDS------SISKA 588 (656)
T ss_dssp TSCEEEEECCCCTTCS-----CCCCEEEEEECGGGBCTTSSBCCCCCEEEES-CSEEETTCEEEEEESS------CCSEE
T ss_pred CcEEEecCCCCCCCCC-----CCeeEEEEEeChhhccCCCCcCCCCcccccC-CceecCCCEEEEEEec------cceEE
Confidence 9999999999876542 3578999999999975 3456799999843 8999999999999873 36789
Q ss_pred EEEeCCcccccCCCCCceEEeeeeeeeecCCCCcEEEEEEcCCCCCcCCCcceEEEEEc-CCcCCccEEEEeC
Q 042303 448 TMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVY-KGVPSPGMWFQIK 519 (519)
Q Consensus 448 ~l~~~~~~THs~n~~QR~v~L~~~~~~~~~~~g~~~~~v~~P~~~~~~ppG~ymlf~~~-~gvPS~a~~v~i~ 519 (519)
+|||++|+||++||+||+|+|+++.. |..+++|++|+|++|||||||||||++ +||||+|+||+|+
T Consensus 589 ~l~~~~~~th~~~~~qr~~~l~~~~~------~~~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~~ 655 (656)
T 1k3i_A 589 SLIRYGTATHTVNTDQRRIPLTLTNN------GGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVT 655 (656)
T ss_dssp EEEECCEEETTBCSSCCEEECCEEEE------ETTEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEEE
T ss_pred EEEecCccccCcCCCCcEEecceEec------CCCEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEEe
Confidence 99999999999999999999999863 235789999999999999999999996 9999999999985
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.3e-34 Score=284.66 Aligned_cols=270 Identities=14% Similarity=0.194 Sum_probs=212.0
Q ss_pred CCEEEEEecccccccCcCCCCCCCCccccCCCCCCCccceeEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCC
Q 042303 9 VNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGY 88 (519)
Q Consensus 9 ~g~vl~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~ 88 (519)
+++|+++||.+. . ......+||+.+++|+.++.++..++..+++..+++||++||.
T Consensus 15 ~~~i~v~GG~~~--~----------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~ 70 (302)
T 2xn4_A 15 PKLMVVVGGQAP--K----------------------AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGF 70 (302)
T ss_dssp CEEEEEECCBSS--S----------------------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCB
T ss_pred CCEEEEECCCCC--C----------------------CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCc
Confidence 789999998552 1 1134679999999999998887777777778889999999997
Q ss_pred CCC--CceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCC----CceEEe-CCCCCCCCcccccccch
Q 042303 89 QGG--ANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPQGQSNKQSIYLPLLR 161 (519)
Q Consensus 89 ~~g--~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~----~~~E~y-P~~~~w~~~~~~~p~l~ 161 (519)
... .+.+++||+. +++|+++++ |+.+|.+++++++ +|+|||+||.+. .++|+| |.+++|.. ..++..
T Consensus 71 ~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~---~~~~p~ 144 (302)
T 2xn4_A 71 NGSLRVRTVDSYDPV-KDQWTSVAN-MRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH---VAPMNT 144 (302)
T ss_dssp CSSSBCCCEEEEETT-TTEEEEECC-CSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTTEEEE---ECCCSS
T ss_pred CCCccccceEEECCC-CCceeeCCC-CCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCCeEee---cCCCCC
Confidence 632 5789999999 899999986 9999999999988 999999999764 368899 99998852 223321
Q ss_pred hccccccCCcccccccccccCccceEEEeeCCcEEEEeCC---------ceEEeeCCCCeEEEEccCCCCCCCccCCCCc
Q 042303 162 ETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN---------RSILFDPKANRVIREYPVLTGGSRNYPASGM 232 (519)
Q Consensus 162 ~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~---------~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~ 232 (519)
.+ +-+..+..+++||++||. +.++||+.+++|. .+++||. +|.. .+
T Consensus 145 ~r--------------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~ 199 (302)
T 2xn4_A 145 RR--------------------SSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST-RRSG---AG 199 (302)
T ss_dssp CC--------------------BSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS-CCBS---CE
T ss_pred cc--------------------cCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc-cccc---cc
Confidence 11 113566679999999984 3689999999998 5888874 4542 22
Q ss_pred EEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEecCC
Q 042303 233 SVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPTG 311 (519)
Q Consensus 233 av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG 311 (519)
++. .+++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.+++ .+|
T Consensus 200 ~~~------------~~~~iyv~GG~~~~------------~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~-~~~ 252 (302)
T 2xn4_A 200 VGV------------LNNLLYAVGGHDGP------------LVRKSVEVYDPT--TNAWRQVADMNMCRRNAGVCA-VNG 252 (302)
T ss_dssp EEE------------ETTEEEEECCBSSS------------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEE-ETT
T ss_pred EEE------------ECCEEEEECCCCCC------------cccceEEEEeCC--CCCEeeCCCCCCccccCeEEE-ECC
Confidence 332 38999999997621 125689999997 7899998 9999999998655 499
Q ss_pred cEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecC-CCCcCCccceeeeEcCCCcE
Q 042303 312 DVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELA-PTTIPRMYHSVSVLLPDGKV 373 (519)
Q Consensus 312 ~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~-~~~~~R~yhs~a~LlpdG~V 373 (519)
+|||+||... ......+++|||+++ +|+.++ +|+.+|.+|+++++ +++|
T Consensus 253 ~i~v~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~--~~~i 302 (302)
T 2xn4_A 253 LLYVVGGDDG--------SCNLASVEYYNPTTD---KWTVVSSCMSTGRSYAGVTVI--DKRL 302 (302)
T ss_dssp EEEEECCBCS--------SSBCCCEEEEETTTT---EEEECSSCCSSCCBSCEEEEE--EC--
T ss_pred EEEEECCcCC--------CcccccEEEEcCCCC---eEEECCcccCcccccceEEEe--cccC
Confidence 9999999752 123457899999999 999997 89999999999887 6664
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=9.4e-34 Score=285.72 Aligned_cols=272 Identities=17% Similarity=0.190 Sum_probs=213.0
Q ss_pred eeeeeCCCCEEEEEecccccccCcCCCCCCCCccccCCCCCCCccceeEEEEECCCCcEEECccCCCcccCCCeeccCCe
Q 042303 2 HAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGH 81 (519)
Q Consensus 2 h~~ll~~~g~vl~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~ 81 (519)
|.++. -+++||++||.+ + . ......+||+.+++|+.++.++..++..++++.+++
T Consensus 18 ~~~~~-~~~~i~v~GG~~-~--~---------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ 72 (308)
T 1zgk_A 18 SHAPK-VGRLIYTAGGYF-R--Q---------------------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGL 72 (308)
T ss_dssp ---CC-CCCCEEEECCBS-S--S---------------------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTE
T ss_pred ccccC-CCCEEEEEeCcC-C--C---------------------CcceEEEEcCCCCeEeECCCCCcccccceEEEECCE
Confidence 55666 689999999962 1 0 123567999999999999888777777777888999
Q ss_pred EEEecCC----CC--CCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCC----CceEEe-CCCCCC
Q 042303 82 LVGTGGY----QG--GANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPQGQS 150 (519)
Q Consensus 82 llv~GG~----~~--g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~----~~~E~y-P~~~~w 150 (519)
||++||. .. ..+.+++||+. +++|+++++ |+.+|.+++++++ +|+|||+||... ..+|+| |.+++|
T Consensus 73 lyv~GG~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 73 LYAVGGRNNSPDGNTDSSALDCYNPM-TNQWSPCAP-MSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp EEEECCEEEETTEEEECCCEEEEETT-TTEEEECCC-CSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred EEEECCCcCCCCCCeecceEEEECCC-CCeEeECCC-CCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 9999997 32 24689999999 899999986 9999999999988 999999999754 468999 999999
Q ss_pred CCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-------ceEEeeCCCCeEEEEccCCCCC
Q 042303 151 NKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-------RSILFDPKANRVIREYPVLTGG 223 (519)
Q Consensus 151 ~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-------~~~~yDp~t~~w~~~~p~~p~~ 223 (519)
.. ..++...+ +-+..+..+++||++||. +.++||+.+++|. .+++||.
T Consensus 150 ~~---~~~~p~~r--------------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~- 204 (308)
T 1zgk_A 150 HL---VAPMLTRR--------------------IGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT- 204 (308)
T ss_dssp EE---CCCCSSCC--------------------BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS-
T ss_pred eE---CCCCCccc--------------------cceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC-
Confidence 52 22332111 113456679999999984 4789999999998 6888874
Q ss_pred CCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceee
Q 042303 224 SRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVM 302 (519)
Q Consensus 224 ~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~ 302 (519)
+|.. .+++. .+++||++||.+.. ..++++++||+. +++|+.. +|+.+|..
T Consensus 205 ~r~~---~~~~~------------~~~~iyv~GG~~~~------------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~ 255 (308)
T 1zgk_A 205 IRSG---AGVCV------------LHNCIYAAGGYDGQ------------DQLNSVERYDVE--TETWTFVAPMKHRRSA 255 (308)
T ss_dssp CCBS---CEEEE------------ETTEEEEECCBCSS------------SBCCCEEEEETT--TTEEEECCCCSSCCBS
T ss_pred cccc---ceEEE------------ECCEEEEEeCCCCC------------CccceEEEEeCC--CCcEEECCCCCCCccc
Confidence 4542 22332 28999999998621 125789999998 7899999 99999999
Q ss_pred ceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeE
Q 042303 303 GDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVL 367 (519)
Q Consensus 303 ~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~L 367 (519)
++++++ +++|||+||... ......+++|||+++ +|+.+++|+.+|.+|++++|
T Consensus 256 ~~~~~~-~~~i~v~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 256 LGITVH-QGRIYVLGGYDG--------HTFLDSVECYDPDTD---TWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp CEEEEE-TTEEEEECCBCS--------SCBCCEEEEEETTTT---EEEEEEECSSCCBSCEEEEC
T ss_pred eEEEEE-CCEEEEEcCcCC--------CcccceEEEEcCCCC---EEeecCCCCCCcccceeEeC
Confidence 997665 999999999752 123457899999999 99999999999999998764
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=277.09 Aligned_cols=252 Identities=13% Similarity=0.154 Sum_probs=202.5
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCC-CCceEEEEeCCCCCccccCCCCCCCccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQG-GANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~-g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~d 127 (519)
....|||.+++|+.++.++..++..++++.+++||++||... ..+.+++|||. +++|..+++ |+.+|..++++++ +
T Consensus 25 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~ 101 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVV-KDSWYSKLG-PPTPRDSLAACAA-E 101 (306)
T ss_dssp SEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETT-TTEEEEEEC-CSSCCBSCEEEEE-T
T ss_pred eEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCC-CCeEEECCC-CCccccceeEEEE-C
Confidence 356899999999999988888888888889999999999762 35789999999 899999985 9999999999988 9
Q ss_pred CcEEEEcCCC-C----CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC
Q 042303 128 GGFIVVGGRG-A----FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN 201 (519)
Q Consensus 128 G~V~viGG~~-~----~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~ 201 (519)
++|||+||.+ . ..+++| |.+++|.. ..++...+ +-+..+..+++||++||.
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~---~~~~p~~r--------------------~~~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHT---KPSMLTQR--------------------CSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEE---ECCCSSCC--------------------BSCEEEEETTEEEEECCE
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEe---CCCCcCCc--------------------ceeEEEEECCEEEEECCC
Confidence 9999999976 2 468999 99998852 22232111 113556679999999983
Q ss_pred -----------ceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCccccccccc
Q 042303 202 -----------RSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKK 270 (519)
Q Consensus 202 -----------~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~ 270 (519)
+.++||+.+++|. .+++||. +|.. .+++. .+++||++||.+..
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~i~v~GG~~~~--------- 212 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWT-ELCPMIE-ARKN---HGLVF------------VKDKIFAVGGQNGL--------- 212 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE------------ETTEEEEECCEETT---------
T ss_pred CCCCCcccccceEEEeCCCCCeEE-ECCCccc-hhhc---ceEEE------------ECCEEEEEeCCCCC---------
Confidence 3689999999998 6888874 4542 23332 28999999997521
Q ss_pred ccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCccee
Q 042303 271 QFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRF 349 (519)
Q Consensus 271 ~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W 349 (519)
..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||... ......+++|||+++ +|
T Consensus 213 ---~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~--------~~~~~~~~~yd~~~~---~W 275 (306)
T 3ii7_A 213 ---GGLDNVEYYDIK--LNEWKMVSPMPWKGVTVKCAAV-GSIVYVLAGFQG--------VGRLGHILEYNTETD---KW 275 (306)
T ss_dssp ---EEBCCEEEEETT--TTEEEECCCCSCCBSCCEEEEE-TTEEEEEECBCS--------SSBCCEEEEEETTTT---EE
T ss_pred ---CCCceEEEeeCC--CCcEEECCCCCCCccceeEEEE-CCEEEEEeCcCC--------CeeeeeEEEEcCCCC---eE
Confidence 125688999997 7899999 99999999997665 999999999752 113347899999999 99
Q ss_pred eecCCCCcCCccceeeeEcC
Q 042303 350 QELAPTTIPRMYHSVSVLLP 369 (519)
Q Consensus 350 ~~~~~~~~~R~yhs~a~Llp 369 (519)
+.+++|+.+|.+|+++++..
T Consensus 276 ~~~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 276 VANSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp EEEEEEECCSCTTCEEEEEE
T ss_pred EeCCCcccccceeEEEEECC
Confidence 99999999999999888743
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-32 Score=274.62 Aligned_cols=267 Identities=18% Similarity=0.194 Sum_probs=211.0
Q ss_pred CCEEEEEec-ccccccCcCCCCCCCCccccCCCCCCCccceeEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecC
Q 042303 9 VNQVLMYDA-TVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGG 87 (519)
Q Consensus 9 ~g~vl~~~~-~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG 87 (519)
+++|+++|| .+.+ . .......||+.+++|+.++.++..++..+++..+++||++||
T Consensus 14 ~~~i~~~GG~~~~~-~----------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG 70 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQ-S----------------------PIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGG 70 (301)
T ss_dssp CEEEEEECCEETTT-E----------------------ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEEeCccCCC-c----------------------ceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcC
Confidence 689999999 4421 0 124567999999999999988777887888888999999999
Q ss_pred CCC--CCceEEEEeCCCCCc---cccCCCCCCCccccceEEEcCCCcEEEEcCCCC----CceEEe-CCCCCCCCccccc
Q 042303 88 YQG--GANTVRYLWTCDTCD---WIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPQGQSNKQSIYL 157 (519)
Q Consensus 88 ~~~--g~~~v~~ydp~~~~~---W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~----~~~E~y-P~~~~w~~~~~~~ 157 (519)
... ..+.+++||+. +++ |+.+++ |+.+|.+++++++ +++|||+||... .++|+| |.+++|.. ..
T Consensus 71 ~~~~~~~~~~~~~d~~-~~~~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~---~~ 144 (301)
T 2vpj_A 71 YDGRSRLSSVECLDYT-ADEDGVWYSVAP-MNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM---LG 144 (301)
T ss_dssp BCSSCBCCCEEEEETT-CCTTCCCEEECC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEE---EE
T ss_pred CCCCccCceEEEEECC-CCCCCeeEECCC-CCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEE---CC
Confidence 763 24689999999 899 999985 9999999999988 999999999764 468999 99998852 22
Q ss_pred ccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-------ceEEeeCCCCeEEEEccCCCCCCCccCCC
Q 042303 158 PLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-------RSILFDPKANRVIREYPVLTGGSRNYPAS 230 (519)
Q Consensus 158 p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-------~~~~yDp~t~~w~~~~p~~p~~~r~~~~~ 230 (519)
++...+ +.+..+..+++||++||. +.++||+.+++|. .+++||. +|..
T Consensus 145 ~~p~~r--------------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~--- 199 (301)
T 2vpj_A 145 DMQTAR--------------------EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMAT-KRSG--- 199 (301)
T ss_dssp ECSSCC--------------------BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSS-CCBS---
T ss_pred CCCCCc--------------------ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCc-cccc---
Confidence 222111 113556679999999984 4789999999998 5888874 4432
Q ss_pred CcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEec
Q 042303 231 GMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILP 309 (519)
Q Consensus 231 g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLp 309 (519)
.+++. .+++||++||.+.. ..++++++||+. +++|+.. +|+.+|..++++++
T Consensus 200 ~~~~~------------~~~~i~v~GG~~~~------------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~- 252 (301)
T 2vpj_A 200 AGVAL------------LNDHIYVVGGFDGT------------AHLSSVEAYNIR--TDSWTTVTSMTTPRCYVGATVL- 252 (301)
T ss_dssp CEEEE------------ETTEEEEECCBCSS------------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-
T ss_pred ceEEE------------ECCEEEEEeCCCCC------------cccceEEEEeCC--CCcEEECCCCCCcccceeEEEE-
Confidence 22332 28999999998621 125788999997 7899998 99999999997665
Q ss_pred CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeE
Q 042303 310 TGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVL 367 (519)
Q Consensus 310 dG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~L 367 (519)
+|+|||+||... ......+++|||+++ +|+.+++|+.+|..|+++++
T Consensus 253 ~~~i~v~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 253 RGRLYAIAGYDG--------NSLLSSIECYDPIID---SWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp TTEEEEECCBCS--------SSBEEEEEEEETTTT---EEEEEEEEEEEEESCEEEEE
T ss_pred CCEEEEEcCcCC--------CcccccEEEEcCCCC---eEEEcCCCCcccccceEEEe
Confidence 999999999752 123457899999999 99999999999999998775
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.8e-31 Score=268.94 Aligned_cols=258 Identities=16% Similarity=0.193 Sum_probs=197.6
Q ss_pred CcccCCCeeccCCeEEEecCCC-CCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCC----CC----
Q 042303 68 DTWCSSGGLTVDGHLVGTGGYQ-GGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGR----GA---- 138 (519)
Q Consensus 68 ~~~c~~~~~l~dG~llv~GG~~-~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~----~~---- 138 (519)
..++...++..+++||++||.. ...+.+++|||. +++|..+++ |+.+|.+++++++ +++|||+||. ..
T Consensus 13 ~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~ 89 (308)
T 1zgk_A 13 LVPRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPS-NGTWLRLAD-LQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDS 89 (308)
T ss_dssp --------CCCCCCEEEECCBSSSBCCCEEEEETT-TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCEEEETTEEEEC
T ss_pred eeeCCccccCCCCEEEEEeCcCCCCcceEEEEcCC-CCeEeECCC-CCcccccceEEEE-CCEEEEECCCcCCCCCCeec
Confidence 3456666778899999999973 235789999999 899999985 9999999998888 9999999997 32
Q ss_pred CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-------ceEEeeCCC
Q 042303 139 FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-------RSILFDPKA 210 (519)
Q Consensus 139 ~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-------~~~~yDp~t 210 (519)
..+++| |.+++|.. ..++...+ +-+..++.+|+||++||. +.++||+.+
T Consensus 90 ~~~~~~d~~~~~W~~---~~~~p~~r--------------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 90 SALDCYNPMTNQWSP---CAPMSVPR--------------------NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp CCEEEEETTTTEEEE---CCCCSSCC--------------------BTCEEEEETTEEEEECCEETTEECCCEEEEETTT
T ss_pred ceEEEECCCCCeEeE---CCCCCcCc--------------------cccEEEEECCEEEEEcCCCCCcccccEEEECCCC
Confidence 468899 99998852 22332111 113556679999999993 478999999
Q ss_pred CeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCc
Q 042303 211 NRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPV 290 (519)
Q Consensus 211 ~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~ 290 (519)
++|. .+++||. +|.. .++++ .+++||++||.+.. ..++++++||+. +++
T Consensus 147 ~~W~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~------------~~~~~~~~yd~~--~~~ 195 (308)
T 1zgk_A 147 DEWH-LVAPMLT-RRIG---VGVAV------------LNRLLYAVGGFDGT------------NRLNSAECYYPE--RNE 195 (308)
T ss_dssp TEEE-ECCCCSS-CCBS---CEEEE------------ETTEEEEECCBCSS------------CBCCCEEEEETT--TTE
T ss_pred CeEe-ECCCCCc-cccc---eEEEE------------ECCEEEEEeCCCCC------------CcCceEEEEeCC--CCe
Confidence 9998 6888884 4542 22332 28999999998621 125789999997 799
Q ss_pred eEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcC
Q 042303 291 WKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLP 369 (519)
Q Consensus 291 W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~Llp 369 (519)
|+.. +|+.+|..++++++ +++|||+||... ......+++|||+++ +|+.+++|+.+|..|+++++
T Consensus 196 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~-- 261 (308)
T 1zgk_A 196 WRMITAMNTIRSGAGVCVL-HNCIYAAGGYDG--------QDQLNSVERYDVETE---TWTFVAPMKHRRSALGITVH-- 261 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE-TTEEEEECCBCS--------SSBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--
T ss_pred EeeCCCCCCccccceEEEE-CCEEEEEeCCCC--------CCccceEEEEeCCCC---cEEECCCCCCCccceEEEEE--
Confidence 9999 99999999997665 999999999752 122457899999999 99999999999999998877
Q ss_pred CCcEEEecCCCCCCCccCCCCCceeeEEEEcCCCC
Q 042303 370 DGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYL 404 (519)
Q Consensus 370 dG~V~v~GG~~~~~~~~~~~~p~~~~vEiy~Ppyl 404 (519)
+++||+.||...... ..++|+|+|...
T Consensus 262 ~~~i~v~GG~~~~~~--------~~~v~~yd~~~~ 288 (308)
T 1zgk_A 262 QGRIYVLGGYDGHTF--------LDSVECYDPDTD 288 (308)
T ss_dssp TTEEEEECCBCSSCB--------CCEEEEEETTTT
T ss_pred CCEEEEEcCcCCCcc--------cceEEEEcCCCC
Confidence 999999999654321 347999999764
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.98 E-value=3.7e-31 Score=265.31 Aligned_cols=251 Identities=16% Similarity=0.187 Sum_probs=194.8
Q ss_pred ccCCeEEEecCCCC-CCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCC----CceEEe-CCCCCC
Q 042303 77 TVDGHLVGTGGYQG-GANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPQGQS 150 (519)
Q Consensus 77 l~dG~llv~GG~~~-g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~----~~~E~y-P~~~~w 150 (519)
..+++||++||... ..+++++||+. +++|..+++ |+.+|.+++++++ +++|||+||.+. ..+++| |.+++|
T Consensus 13 ~~~~~i~v~GG~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 13 NLPKLMVVVGGQAPKAIRSVECYDFK-EERWHQVAE-LPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQW 89 (302)
T ss_dssp --CEEEEEECCBSSSBCCCEEEEETT-TTEEEEECC-CSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCCEEEEECCCCCCCCCcEEEEcCc-CCcEeEccc-CCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCce
Confidence 35789999999753 35789999999 899999985 9999999998888 999999999764 468899 999988
Q ss_pred CCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-------ceEEeeCCCCeEEEEccCCCCC
Q 042303 151 NKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-------RSILFDPKANRVIREYPVLTGG 223 (519)
Q Consensus 151 ~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-------~~~~yDp~t~~w~~~~p~~p~~ 223 (519)
.. ..++...+ +.+..++.+++||++||. ++++||+.+++|. .+++||.
T Consensus 90 ~~---~~~~p~~r--------------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~- 144 (302)
T 2xn4_A 90 TS---VANMRDRR--------------------STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-HVAPMNT- 144 (302)
T ss_dssp EE---ECCCSSCC--------------------BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEE-EECCCSS-
T ss_pred ee---CCCCCccc--------------------cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEe-ecCCCCC-
Confidence 52 22232111 113566779999999984 4789999999998 5888884
Q ss_pred CCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceee
Q 042303 224 SRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVM 302 (519)
Q Consensus 224 ~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~ 302 (519)
+|.. .+++. .+++||++||.+.... ..++++++||+. +++|+.. +|+.+|..
T Consensus 145 ~r~~---~~~~~------------~~~~iyv~GG~~~~~~----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~ 197 (302)
T 2xn4_A 145 RRSS---VGVGV------------VGGLLYAVGGYDVASR----------QCLSTVECYNAT--TNEWTYIAEMSTRRSG 197 (302)
T ss_dssp CCBS---CEEEE------------ETTEEEEECCEETTTT----------EECCCEEEEETT--TTEEEEECCCSSCCBS
T ss_pred cccC---ceEEE------------ECCEEEEEeCCCCCCC----------ccccEEEEEeCC--CCcEEECCCCcccccc
Confidence 4542 22332 3899999999752110 135789999997 7899998 99999999
Q ss_pred ceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCCC
Q 042303 303 GDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHD 382 (519)
Q Consensus 303 ~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~ 382 (519)
|+++++ +++|||+||.... .....+++|||+++ +|+.+++|+.+|..|+++++ +++||+.||....
T Consensus 198 ~~~~~~-~~~iyv~GG~~~~--------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~ 263 (302)
T 2xn4_A 198 AGVGVL-NNLLYAVGGHDGP--------LVRKSVEVYDPTTN---AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGS 263 (302)
T ss_dssp CEEEEE-TTEEEEECCBSSS--------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred ccEEEE-CCEEEEECCCCCC--------cccceEEEEeCCCC---CEeeCCCCCCccccCeEEEE--CCEEEEECCcCCC
Confidence 987654 9999999997521 12346899999999 99999999999999988776 9999999996543
Q ss_pred CCccCCCCCceeeEEEEcCCCC
Q 042303 383 GYKFDHKYPTELRVEKFSPPYL 404 (519)
Q Consensus 383 ~~~~~~~~p~~~~vEiy~Ppyl 404 (519)
.. ..++|+|+|..-
T Consensus 264 ~~--------~~~v~~yd~~~~ 277 (302)
T 2xn4_A 264 CN--------LASVEYYNPTTD 277 (302)
T ss_dssp SB--------CCCEEEEETTTT
T ss_pred cc--------cccEEEEcCCCC
Confidence 21 247999999864
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.98 E-value=5.4e-31 Score=264.66 Aligned_cols=250 Identities=13% Similarity=0.141 Sum_probs=195.9
Q ss_pred CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCC---CceEEe-CCCCCCCCcc
Q 042303 79 DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGA---FSYEYI-PPQGQSNKQS 154 (519)
Q Consensus 79 dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~---~~~E~y-P~~~~w~~~~ 154 (519)
.+.||++||... .+++++|||. +++|..+++ |+.+|.+++++++ +++|||+||.+. ..+++| |.+++|..
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~-- 84 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPK-DYSWTDIRC-PFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKDSWYS-- 84 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETT-TTEEEECCC-CSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTTEEEE--
T ss_pred cceEEEEeCCCC-CceEEEecCC-CCCEecCCC-CCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCCeEEE--
Confidence 378999999764 7889999999 899999986 9999999999988 999999999762 468889 99998852
Q ss_pred cccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--------eEEeeCCCCeEEEEccCCCCCCCc
Q 042303 155 IYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--------SILFDPKANRVIREYPVLTGGSRN 226 (519)
Q Consensus 155 ~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--------~~~yDp~t~~w~~~~p~~p~~~r~ 226 (519)
..++...+ +-+..++.+++||++||.+ .++||+.+++|. .+++||. +|.
T Consensus 85 -~~~~p~~r--------------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~ 141 (306)
T 3ii7_A 85 -KLGPPTPR--------------------DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT-QRC 141 (306)
T ss_dssp -EECCSSCC--------------------BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS-CCB
T ss_pred -CCCCCccc--------------------cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC-Ccc
Confidence 22232111 1135567799999999953 789999999997 5888884 453
Q ss_pred cCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceeecee
Q 042303 227 YPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDM 305 (519)
Q Consensus 227 ~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~ 305 (519)
. .+++. .+++||++||...... ....++++++||+. +++|+.. +|+.+|..|++
T Consensus 142 ~---~~~~~------------~~~~iyv~GG~~~~~~--------~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~ 196 (306)
T 3ii7_A 142 S---HGMVE------------ANGLIYVCGGSLGNNV--------SGRVLNSCEVYDPA--TETWTELCPMIEARKNHGL 196 (306)
T ss_dssp S---CEEEE------------ETTEEEEECCEESCTT--------TCEECCCEEEEETT--TTEEEEECCCSSCCBSCEE
T ss_pred e---eEEEE------------ECCEEEEECCCCCCCC--------cccccceEEEeCCC--CCeEEECCCccchhhcceE
Confidence 2 22332 2899999999752111 00126789999998 7899999 99999999997
Q ss_pred EEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCCCCCc
Q 042303 306 TILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYK 385 (519)
Q Consensus 306 vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~ 385 (519)
+++ +++|||+||.... .....+++|||+++ +|+.+++++.+|..|+++++ +++||+.||......
T Consensus 197 ~~~-~~~i~v~GG~~~~--------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~- 261 (306)
T 3ii7_A 197 VFV-KDKIFAVGGQNGL--------GGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGR- 261 (306)
T ss_dssp EEE-TTEEEEECCEETT--------EEBCCEEEEETTTT---EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSB-
T ss_pred EEE-CCEEEEEeCCCCC--------CCCceEEEeeCCCC---cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCee-
Confidence 665 9999999997521 22446899999999 99999999999999998887 999999999754322
Q ss_pred cCCCCCceeeEEEEcCCCC
Q 042303 386 FDHKYPTELRVEKFSPPYL 404 (519)
Q Consensus 386 ~~~~~p~~~~vEiy~Ppyl 404 (519)
..++++|+|..-
T Consensus 262 -------~~~~~~yd~~~~ 273 (306)
T 3ii7_A 262 -------LGHILEYNTETD 273 (306)
T ss_dssp -------CCEEEEEETTTT
T ss_pred -------eeeEEEEcCCCC
Confidence 347999999874
No 9
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.98 E-value=2.5e-31 Score=268.97 Aligned_cols=263 Identities=15% Similarity=0.207 Sum_probs=197.7
Q ss_pred EEEEECCCCcEEECccC-CCcccCCCeeccCCeEEEecCCC---CC-----CceEEEEeCCCCCccccCCCCCCCccccc
Q 042303 50 SVLFDIETAKLKPLKIQ-TDTWCSSGGLTVDGHLVGTGGYQ---GG-----ANTVRYLWTCDTCDWIEYPTALAEPRWYS 120 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~llv~GG~~---~g-----~~~v~~ydp~~~~~W~~~~~~m~~~R~y~ 120 (519)
..+|||.+++|...+.. +..++..++++.+++||++||.. ++ .+.+++|||. +++|.++++ |+.+|.+|
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~ 103 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV-SSEWVGLPP-LPSARCLF 103 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT-TTEEEECSC-BSSCBCSC
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC-CCcEEECCC-CCcccccc
Confidence 46899999999884432 23466667788899999999953 11 1348999999 999999985 99999999
Q ss_pred eEEEcCCCcEEEEcCCCC------CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCC
Q 042303 121 TQVTLPDGGFIVVGGRGA------FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDG 193 (519)
Q Consensus 121 s~~~L~dG~V~viGG~~~------~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G 193 (519)
+++++ +++|||+||... .++++| |.+++|.. ..++...+ +-+..+..+|
T Consensus 104 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~r--------------------~~~~~~~~~~ 159 (318)
T 2woz_A 104 GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE---VKNLPIKV--------------------YGHNVISHNG 159 (318)
T ss_dssp EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE---ECCCSSCE--------------------ESCEEEEETT
T ss_pred ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeE---CCCCCCcc--------------------cccEEEEECC
Confidence 99988 999999999742 357899 99999952 22332111 1135566899
Q ss_pred cEEEEeCC--------ceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccc
Q 042303 194 NLFIFSNN--------RSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYY 265 (519)
Q Consensus 194 ~Ifv~Gg~--------~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~ 265 (519)
+||++||. +.++||+.+++|. .+++||. +|.. +++++ .+++||++||.....
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~--~~~~~-------------~~~~iyv~GG~~~~~--- 219 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKGDWK-DLAPMKT-PRSM--FGVAI-------------HKGKIVIAGGVTEDG--- 219 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTTEEE-EECCCSS-CCBS--CEEEE-------------ETTEEEEEEEEETTE---
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCCEEE-ECCCCCC-Cccc--ceEEE-------------ECCEEEEEcCcCCCC---
Confidence 99999984 3789999999998 6888874 4542 23332 289999999976311
Q ss_pred cccccccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccC-CCCCccccEEEeCCC
Q 042303 266 AEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWND-AEEPALAPALYKTKE 343 (519)
Q Consensus 266 ~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~-~~~~~~~~e~YdP~t 343 (519)
.++++++||+. +++|+.. +||.+|..|++++ .+++|||+||........+. .......+++|||++
T Consensus 220 ---------~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 220 ---------LSASVEAFDLK--TNKWEVMTEFPQERSSISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp ---------EEEEEEEEETT--TCCEEECCCCSSCCBSCEEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred ---------ccceEEEEECC--CCeEEECCCCCCcccceEEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 24678999987 7899999 9999999998655 59999999997531000000 012245789999999
Q ss_pred CCcceeeecCCCCcCCccceeeeEcCCCcEEEec
Q 042303 344 KRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAG 377 (519)
Q Consensus 344 ~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~G 377 (519)
+ +|+.+ ++.+|..|+++++ +++||+..
T Consensus 288 ~---~W~~~--~~~~r~~~~~~~~--~~~iyi~~ 314 (318)
T 2woz_A 288 K---EWAGM--LKEIRYASGASCL--ATRLNLFK 314 (318)
T ss_dssp T---EEEEE--ESCCGGGTTCEEE--EEEEEGGG
T ss_pred C---Eehhh--cccccccccceee--CCEEEEEE
Confidence 9 99998 8889999998887 99999874
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.97 E-value=4.8e-30 Score=256.85 Aligned_cols=248 Identities=17% Similarity=0.220 Sum_probs=194.2
Q ss_pred cCCeEEEecC-CCC--CCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCC----CceEEe-CCCCC
Q 042303 78 VDGHLVGTGG-YQG--GANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPQGQ 149 (519)
Q Consensus 78 ~dG~llv~GG-~~~--g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~----~~~E~y-P~~~~ 149 (519)
.+++||++|| ... ..+.+++||+. +++|..++. |+.+|.+++++++ +++||++||... ..+++| +.+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPK-TQEWSFLPS-ITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETT-TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCC-CCeEEeCCC-CChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 4789999999 442 25789999999 899999985 9999999998887 899999999763 468899 99998
Q ss_pred ---CCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-------ceEEeeCCCCeEEEEccC
Q 042303 150 ---SNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-------RSILFDPKANRVIREYPV 219 (519)
Q Consensus 150 ---w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-------~~~~yDp~t~~w~~~~p~ 219 (519)
|.. ..++...+ +-+..+..+++||++||. +.++||+.+++|. .+++
T Consensus 90 ~~~W~~---~~~~p~~r--------------------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~ 145 (301)
T 2vpj_A 90 DGVWYS---VAPMNVRR--------------------GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGD 145 (301)
T ss_dssp TCCCEE---ECCCSSCC--------------------BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEE
T ss_pred CCeeEE---CCCCCCCc--------------------cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCC
Confidence 852 22222111 113556679999999984 4789999999998 5888
Q ss_pred CCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCc
Q 042303 220 LTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPT 298 (519)
Q Consensus 220 ~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~ 298 (519)
||. +|.. .+++. .+++||++||.+.. ..++++++||+. +++|+.. +|+.
T Consensus 146 ~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~------------~~~~~~~~~d~~--~~~W~~~~~~p~ 195 (301)
T 2vpj_A 146 MQT-AREG---AGLVV------------ASGVIYCLGGYDGL------------NILNSVEKYDPH--TGHWTNVTPMAT 195 (301)
T ss_dssp CSS-CCBS---CEEEE------------ETTEEEEECCBCSS------------CBCCCEEEEETT--TTEEEEECCCSS
T ss_pred CCC-Cccc---ceEEE------------ECCEEEEECCCCCC------------cccceEEEEeCC--CCcEEeCCCCCc
Confidence 874 4532 22332 38999999997621 135789999998 7899998 9999
Q ss_pred ceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecC
Q 042303 299 RRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGS 378 (519)
Q Consensus 299 ~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG 378 (519)
+|..|+++++ +++|||+||.... .....+++||++++ +|+.+++++.+|..|+++++ +++||+.||
T Consensus 196 ~r~~~~~~~~-~~~i~v~GG~~~~--------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 261 (301)
T 2vpj_A 196 KRSGAGVALL-NDHIYVVGGFDGT--------AHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGATVL--RGRLYAIAG 261 (301)
T ss_dssp CCBSCEEEEE-TTEEEEECCBCSS--------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred ccccceEEEE-CCEEEEEeCCCCC--------cccceEEEEeCCCC---cEEECCCCCCcccceeEEEE--CCEEEEEcC
Confidence 9999987655 9999999997521 12447899999999 99999999999999998877 999999999
Q ss_pred CCCCCCccCCCCCceeeEEEEcCCCC
Q 042303 379 NTHDGYKFDHKYPTELRVEKFSPPYL 404 (519)
Q Consensus 379 ~~~~~~~~~~~~p~~~~vEiy~Ppyl 404 (519)
...... ..++|+|+|..-
T Consensus 262 ~~~~~~--------~~~v~~yd~~~~ 279 (301)
T 2vpj_A 262 YDGNSL--------LSSIECYDPIID 279 (301)
T ss_dssp BCSSSB--------EEEEEEEETTTT
T ss_pred cCCCcc--------cccEEEEcCCCC
Confidence 644321 358999998764
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.97 E-value=3.8e-31 Score=267.30 Aligned_cols=262 Identities=16% Similarity=0.158 Sum_probs=199.1
Q ss_pred EEEEECCCCcEEECccC--CCcccCCCeeccCCeEEEecCCC----C--C--CceEEEEeCCCCCccccCCCCCCCcccc
Q 042303 50 SVLFDIETAKLKPLKIQ--TDTWCSSGGLTVDGHLVGTGGYQ----G--G--ANTVRYLWTCDTCDWIEYPTALAEPRWY 119 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~llv~GG~~----~--g--~~~v~~ydp~~~~~W~~~~~~m~~~R~y 119 (519)
...|||.+++|+. ..+ +..++..+++..+++||++||.. . . .+.+++|||. +++|+.+++ |+.+|.+
T Consensus 15 ~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~ 91 (315)
T 4asc_A 15 AVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL-DSEWLGMPP-LPSPRCL 91 (315)
T ss_dssp EEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT-TTEEEECCC-BSSCEES
T ss_pred eEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC-CCeEEECCC-CCcchhc
Confidence 4689999999986 333 23566667777899999999952 1 1 2458999999 899999986 9999999
Q ss_pred ceEEEcCCCcEEEEcCCC----C---CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEee
Q 042303 120 STQVTLPDGGFIVVGGRG----A---FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVT 191 (519)
Q Consensus 120 ~s~~~L~dG~V~viGG~~----~---~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~ 191 (519)
|+++++ +++|||+||.+ . .++++| |.+++|.. ..++...+ +.+..+..
T Consensus 92 ~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~---~~~~p~~r--------------------~~~~~~~~ 147 (315)
T 4asc_A 92 FGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE---SDPLPYVV--------------------YGHTVLSH 147 (315)
T ss_dssp CEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE---CCCCSSCC--------------------BSCEEEEE
T ss_pred eeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE---CCCCCCcc--------------------cceeEEEE
Confidence 999988 99999999953 1 468999 99998952 22332111 12356678
Q ss_pred CCcEEEEeCC--------ceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcc
Q 042303 192 DGNLFIFSNN--------RSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAF 263 (519)
Q Consensus 192 ~G~Ifv~Gg~--------~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~ 263 (519)
+++||++||. +.++||+.+++|. .+++||. +|.. .+++. .+++||++||.+...
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~~- 209 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWK-ELAPMQT-ARSL---FGATV------------HDGRIIVAAGVTDTG- 209 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEE-ECCCCSS-CCBS---CEEEE------------ETTEEEEEEEECSSS-
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEE-ECCCCCC-chhc---eEEEE------------ECCEEEEEeccCCCC-
Confidence 9999999996 4789999999998 6898884 4542 22332 289999999976321
Q ss_pred cccccccccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCC---CCccccEEE
Q 042303 264 YYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAE---EPALAPALY 339 (519)
Q Consensus 264 ~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~---~~~~~~e~Y 339 (519)
.++++++||+. +++|+.. +|+.+|..++++++ +++|||+||.... .. .+.. .....+++|
T Consensus 210 -----------~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~-~~-~~~~~~~~~~~~v~~y 273 (315)
T 4asc_A 210 -----------LTSSAEVYSIT--DNKWAPFEAFPQERSSLSLVSL-VGTLYAIGGFATL-ET-ESGELVPTELNDIWRY 273 (315)
T ss_dssp -----------EEEEEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEEEE-EC-TTSCEEEEEEEEEEEE
T ss_pred -----------ccceEEEEECC--CCeEEECCCCCCcccceeEEEE-CCEEEEECCcccc-Cc-CCccccccccCcEEEe
Confidence 24678999997 7899999 99999999987655 9999999997421 00 0000 123468999
Q ss_pred eCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCC
Q 042303 340 KTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 340 dP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
||+++ +|+.+ ++.+|..|+++++ ++++|+....
T Consensus 274 d~~~~---~W~~~--~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 274 NEEEK---KWEGV--LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp ETTTT---EEEEE--ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred cCCCC---hhhhh--ccCCcCccceEEe--CCEEEEEEeh
Confidence 99999 99999 6778999998887 9999998753
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=6.7e-30 Score=262.23 Aligned_cols=261 Identities=15% Similarity=0.119 Sum_probs=185.8
Q ss_pred ECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCC-CCccccCCCCCC-CccccceEEEcCCCcEEEEcCC-C-
Q 042303 62 PLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCD-TCDWIEYPTALA-EPRWYSTQVTLPDGGFIVVGGR-G- 137 (519)
Q Consensus 62 ~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~-~~~W~~~~~~m~-~~R~y~s~~~L~dG~V~viGG~-~- 137 (519)
+++.++..++.+.+++.+++|||+||.. .+.+++||+.. +++|..+++ |+ .+|.+++++++ +|+|||+||. +
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~d~~~~~~~W~~~~~-~p~~~R~~~~~~~~-~~~lyv~GG~~~~ 77 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSA--GTAWYKLDTQAKDKKWTALAA-FPGGPRDQATSAFI-DGNLYVFGGIGKN 77 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGG--TTCEEEEETTSSSCCEEECCC-CTTCCCBSCEEEEE-TTEEEEECCEEEC
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcC--CCeEEEEccccCCCCeeECCC-CCCCcCccceEEEE-CCEEEEEcCCCCC
Confidence 3455666677777777799999999975 35799999972 489999986 99 89999999988 9999999998 2
Q ss_pred --C-----CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC--------
Q 042303 138 --A-----FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-------- 201 (519)
Q Consensus 138 --~-----~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-------- 201 (519)
. ..+++| |.+++|.. ..++. ...+ +-+..+..+++||++||.
T Consensus 78 ~~~~~~~~~~v~~yd~~~~~W~~---~~~~~-p~~r------------------~~~~~~~~~~~iyv~GG~~~~~~~~~ 135 (357)
T 2uvk_A 78 SEGLTQVFNDVHKYNPKTNSWVK---LMSHA-PMGM------------------AGHVTFVHNGKAYVTGGVNQNIFNGY 135 (357)
T ss_dssp TTSCEEECCCEEEEETTTTEEEE---CSCCC-SSCC------------------SSEEEEEETTEEEEEECCCHHHHHHH
T ss_pred CCccceeeccEEEEeCCCCcEEE---CCCCC-Cccc------------------ccceEEEECCEEEEEeCcCCCcCccc
Confidence 1 468999 99999952 22222 1111 113455689999999993
Q ss_pred ---------------------------------ceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCcccc
Q 042303 202 ---------------------------------RSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKII 248 (519)
Q Consensus 202 ---------------------------------~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~ 248 (519)
++++||+.+++|. .+++||...|. ..+++. .
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~~~~---~~~~~~------------~ 199 (357)
T 2uvk_A 136 FEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWS-YAGESPWYGTA---GAAVVN------------K 199 (357)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEE-EEEECSSCCCB---SCEEEE------------E
T ss_pred ccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEE-ECCCCCCCCcc---cccEEE------------E
Confidence 5789999999998 58888743332 122332 3
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCccee--eceeEEecCCcEEEEcCcCCCCCC
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRV--MGDMTILPTGDVLLVNGAQNGTSA 325 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~--~~~~vvLpdG~V~viGG~~~g~~g 325 (519)
+++||++||..... ..+..+++||+...+++|+.. +|+.+|. .+++ ++.+++|||+||.......
T Consensus 200 ~~~iyv~GG~~~~~-----------~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~~~iyv~GG~~~~~~~ 267 (357)
T 2uvk_A 200 GDKTWLINGEAKPG-----------LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFA-GISNDSLIFAGGAGFKGSR 267 (357)
T ss_dssp TTEEEEECCEEETT-----------EECCCEEEEECC---CEEEECCCSSTTTCCBSCEE-EEETTEEEEECCEECTTHH
T ss_pred CCEEEEEeeecCCC-----------cccCceEEEEecCCCCcEEecCCCCCCcccccceE-EEECCEEEEEcCccccCCc
Confidence 89999999975211 124567788873337899998 8877754 5554 4569999999997421000
Q ss_pred -------c--cCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 326 -------W--NDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 326 -------~--~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
+ ......+..+++|||+++ +|+.+++++.+|.+|+++++ +++|||.||...
T Consensus 268 ~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 327 (357)
T 2uvk_A 268 ENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGELSQGRAYGVSLPW--NNSLLIIGGETA 327 (357)
T ss_dssp HHHHTTCSSTTTTCCCEECCEEEECC------CEEEEECSSCCBSSEEEEE--TTEEEEEEEECG
T ss_pred ccccccceeccccccceeeEEEEecCCC---ceeeCCCCCCCcccceeEEe--CCEEEEEeeeCC
Confidence 0 011223457899999999 99999999999999998776 999999999654
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.96 E-value=5.9e-29 Score=251.16 Aligned_cols=249 Identities=13% Similarity=0.090 Sum_probs=185.8
Q ss_pred CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCC--CCccccceEEEcCCCcEEEEcCC-----CC-----CceEEe-C
Q 042303 79 DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTAL--AEPRWYSTQVTLPDGGFIVVGGR-----GA-----FSYEYI-P 145 (519)
Q Consensus 79 dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m--~~~R~y~s~~~L~dG~V~viGG~-----~~-----~~~E~y-P 145 (519)
...|+++|| +.+.+|||. +++|.. ++ | +.+|.+++++++ +++|||+||. .. ..++.| |
T Consensus 4 ~~~l~~~GG-----~~~~~yd~~-~~~W~~-~~-~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 4 QDLIFMISE-----EGAVAYDPA-ANECYC-AS-LSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp EEEEEEEET-----TEEEEEETT-TTEEEE-EE-CCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEET
T ss_pred ceEEEEEcC-----CceEEECCC-CCeEec-CC-CCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecC
Confidence 347889998 579999999 899986 43 6 458999988887 9999999995 11 136788 9
Q ss_pred CCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC----------ceEEeeCCCCeEEE
Q 042303 146 PQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN----------RSILFDPKANRVIR 215 (519)
Q Consensus 146 ~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~----------~~~~yDp~t~~w~~ 215 (519)
.+++|.. ..++...+. -+..+..+++||++||. +.++||+.+++|.
T Consensus 75 ~~~~W~~---~~~~p~~r~--------------------~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~- 130 (315)
T 4asc_A 75 LDSEWLG---MPPLPSPRC--------------------LFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG- 130 (315)
T ss_dssp TTTEEEE---CCCBSSCEE--------------------SCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-
T ss_pred CCCeEEE---CCCCCcchh--------------------ceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-
Confidence 9998852 223321111 13566679999999993 3789999999997
Q ss_pred EccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-
Q 042303 216 EYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE- 294 (519)
Q Consensus 216 ~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~- 294 (519)
.+++||. +|.. .+++. .+++||++||...+. ..++++++||+. +++|+..
T Consensus 131 ~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~~-----------~~~~~~~~yd~~--~~~W~~~~ 181 (315)
T 4asc_A 131 ESDPLPY-VVYG---HTVLS------------HMDLVYVIGGKGSDR-----------KCLNKMCVYDPK--KFEWKELA 181 (315)
T ss_dssp ECCCCSS-CCBS---CEEEE------------ETTEEEEECCBCTTS-----------CBCCCEEEEETT--TTEEEECC
T ss_pred ECCCCCC-cccc---eeEEE------------ECCEEEEEeCCCCCC-----------cccceEEEEeCC--CCeEEECC
Confidence 6888885 4532 22332 389999999984221 246789999998 7899999
Q ss_pred cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEE
Q 042303 295 MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVL 374 (519)
Q Consensus 295 ~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~ 374 (519)
+|+.+|..|+++++ +++|||+||... ......+++|||+++ +|+.+++++.+|..|+++++ +++||
T Consensus 182 ~~p~~r~~~~~~~~-~~~iyv~GG~~~--------~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~l~ 247 (315)
T 4asc_A 182 PMQTARSLFGATVH-DGRIIVAAGVTD--------TGLTSSAEVYSITDN---KWAPFEAFPQERSSLSLVSL--VGTLY 247 (315)
T ss_dssp CCSSCCBSCEEEEE-TTEEEEEEEECS--------SSEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEE
T ss_pred CCCCchhceEEEEE-CCEEEEEeccCC--------CCccceEEEEECCCC---eEEECCCCCCcccceeEEEE--CCEEE
Confidence 99999999997665 999999999752 123447899999999 99999999999999998877 99999
Q ss_pred EecCCCCCCCccCCCC--CceeeEEEEcCCCC
Q 042303 375 IAGSNTHDGYKFDHKY--PTELRVEKFSPPYL 404 (519)
Q Consensus 375 v~GG~~~~~~~~~~~~--p~~~~vEiy~Ppyl 404 (519)
+.||....... +..+ -...++|+|+|..-
T Consensus 248 v~GG~~~~~~~-~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 248 AIGGFATLETE-SGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEEEEEECT-TSCEEEEEEEEEEEEETTTT
T ss_pred EECCccccCcC-CccccccccCcEEEecCCCC
Confidence 99996421000 0000 01347999999874
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.96 E-value=2.6e-28 Score=246.75 Aligned_cols=249 Identities=16% Similarity=0.136 Sum_probs=184.1
Q ss_pred CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC--CccccceEEEcCCCcEEEEcCCC----C------CceEEe-C
Q 042303 79 DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA--EPRWYSTQVTLPDGGFIVVGGRG----A------FSYEYI-P 145 (519)
Q Consensus 79 dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~--~~R~y~s~~~L~dG~V~viGG~~----~------~~~E~y-P 145 (519)
++.|+++||. .+++|||. +++|... + |+ .+|.+++++++ +++|||+||.. . ..++.| |
T Consensus 15 ~~~i~~~GG~-----~~~~yd~~-~~~W~~~-~-~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~ 85 (318)
T 2woz_A 15 KDLILLVNDT-----AAVAYDPM-ENECYLT-A-LAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDN 85 (318)
T ss_dssp EEEEEEECSS-----EEEEEETT-TTEEEEE-E-ECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEEET
T ss_pred cchhhhcccc-----ceEEECCC-CCceecc-c-CCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEEeC
Confidence 5689999994 48999999 9999873 3 44 68988887776 99999999952 1 127788 9
Q ss_pred CCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC---------ceEEeeCCCCeEEEE
Q 042303 146 PQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN---------RSILFDPKANRVIRE 216 (519)
Q Consensus 146 ~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~---------~~~~yDp~t~~w~~~ 216 (519)
.+++|.. ..++...+ +-+..++.+++||++||. ++++||+.+++|. .
T Consensus 86 ~~~~W~~---~~~~p~~r--------------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~ 141 (318)
T 2woz_A 86 VSSEWVG---LPPLPSAR--------------------CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-E 141 (318)
T ss_dssp TTTEEEE---CSCBSSCB--------------------CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-E
T ss_pred CCCcEEE---CCCCCccc--------------------cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEe-E
Confidence 9998852 22332111 113566679999999984 3689999999998 5
Q ss_pred ccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-c
Q 042303 217 YPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-M 295 (519)
Q Consensus 217 ~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~ 295 (519)
+++||. +|.. .+++. .+++||++||...+. ..++++++||+. +++|+.. +
T Consensus 142 ~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~~-----------~~~~~~~~yd~~--~~~W~~~~~ 192 (318)
T 2woz_A 142 VKNLPI-KVYG---HNVIS------------HNGMIYCLGGKTDDK-----------KCTNRVFIYNPK--KGDWKDLAP 192 (318)
T ss_dssp ECCCSS-CEES---CEEEE------------ETTEEEEECCEESSS-----------CBCCCEEEEETT--TTEEEEECC
T ss_pred CCCCCC-cccc---cEEEE------------ECCEEEEEcCCCCCC-----------CccceEEEEcCC--CCEEEECCC
Confidence 888884 4432 22322 389999999974211 235789999998 7899999 9
Q ss_pred CCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEE
Q 042303 296 MPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLI 375 (519)
Q Consensus 296 M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v 375 (519)
|+.+|..|+++++ +++|||+||.... .....+++|||+++ +|+.+++++.+|..|+++++ +++||+
T Consensus 193 ~p~~r~~~~~~~~-~~~iyv~GG~~~~--------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v 258 (318)
T 2woz_A 193 MKTPRSMFGVAIH-KGKIVIAGGVTED--------GLSASVEAFDLKTN---KWEVMTEFPQERSSISLVSL--AGSLYA 258 (318)
T ss_dssp CSSCCBSCEEEEE-TTEEEEEEEEETT--------EEEEEEEEEETTTC---CEEECCCCSSCCBSCEEEEE--TTEEEE
T ss_pred CCCCcccceEEEE-CCEEEEEcCcCCC--------CccceEEEEECCCC---eEEECCCCCCcccceEEEEE--CCEEEE
Confidence 9999999997654 9999999997521 12347899999999 99999999999999988877 999999
Q ss_pred ecCCCCCCCccCCCC-C-ceeeEEEEcCCCC
Q 042303 376 AGSNTHDGYKFDHKY-P-TELRVEKFSPPYL 404 (519)
Q Consensus 376 ~GG~~~~~~~~~~~~-p-~~~~vEiy~Ppyl 404 (519)
.||....... .... + ...++++|+|...
T Consensus 259 ~GG~~~~~~~-~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 259 IGGFAMIQLE-SKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp ECCBCCBC-----CCBCCBCCCEEEEETTTT
T ss_pred ECCeeccCCC-CceeccceeeeEEEEeCCCC
Confidence 9996532100 0000 0 1347999999774
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=3.7e-28 Score=270.17 Aligned_cols=292 Identities=13% Similarity=0.104 Sum_probs=200.4
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeecc-CCeEEEecCCCC--------CCceEEEEeCCCCCccccCCCCCCCccccc
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTV-DGHLVGTGGYQG--------GANTVRYLWTCDTCDWIEYPTALAEPRWYS 120 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~llv~GG~~~--------g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~ 120 (519)
...|||.+++|+++..++. ...++++++ +|+||++||... +...+++|||. +++|++++. |+.+|..+
T Consensus 168 ~~~~dp~~~~W~~~~~~P~-~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~-t~~w~~~~~-~~~~~~~~ 244 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI-VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS-TGIVSDRTV-TVTKHDMF 244 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS-CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT-TCCBCCCEE-EECSCCCS
T ss_pred cccCCCCCCeeeeeccCCC-CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC-CCcEEeCcc-cCCCCCCc
Confidence 4568999999999877755 233344555 999999999752 23478999999 999999875 88777555
Q ss_pred --eEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEE
Q 042303 121 --TQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFI 197 (519)
Q Consensus 121 --s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv 197 (519)
+++++.||+|||+||.+..++++| |.+++|.. ..+|... ..|+.+.+++||+||+
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~---~~~~~~~-------------------R~~~s~~~~~dg~iyv 302 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIP---GPDMQVA-------------------RGYQSSATMSDGRVFT 302 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEE---CCCCSSC-------------------CSSCEEEECTTSCEEE
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeE---CCCCCcc-------------------ccccceEEecCCeEEE
Confidence 356677999999999877789999 99998852 2233211 1233445556999999
Q ss_pred EeCC--------ceEEeeCCCCeEEEEcc-----CCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCccc
Q 042303 198 FSNN--------RSILFDPKANRVIREYP-----VLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFY 264 (519)
Q Consensus 198 ~Gg~--------~~~~yDp~t~~w~~~~p-----~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~ 264 (519)
+||. +.|+||+.+++|. .++ +|+. .| ..+++ ..+++||++||.+...+.
T Consensus 303 ~GG~~~~~~~~~~~e~yd~~t~~W~-~~~~~~~~p~~~-~~----~~~~~------------~~~~~iyv~Gg~~g~~~~ 364 (656)
T 1k3i_A 303 IGGSWSGGVFEKNGEVYSPSSKTWT-SLPNAKVNPMLT-AD----KQGLY------------RSDNHAWLFGWKKGSVFQ 364 (656)
T ss_dssp ECCCCCSSSCCCCEEEEETTTTEEE-EETTSCSGGGCC-CC----TTGGG------------TTTCSCCEEECGGGCEEE
T ss_pred EeCcccCCcccccceEeCCCCCcce-eCCCcccccccc-cc----cccee------------ecCCceEEEECCCCcEEE
Confidence 9992 4799999999997 463 3432 12 11111 138899999997621110
Q ss_pred ccccccccccCCCceEEEEecCCCCceEec--cCCc------ceeeceeEE--ecCCcEEEEcCcCCCCCCccCCCCCcc
Q 042303 265 YAEDKKQFWPALQDCGRIRITEPNPVWKKE--MMPT------RRVMGDMTI--LPTGDVLLVNGAQNGTSAWNDAEEPAL 334 (519)
Q Consensus 265 ~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~--~M~~------~R~~~~~vv--LpdG~V~viGG~~~g~~g~~~~~~~~~ 334 (519)
...++.+++||+. ++.|... .++. +|..+.+++ ..+|+|||+||..... + ........
T Consensus 365 --------~~~~~~v~~yd~~--~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~-~-~~~~~~~~ 432 (656)
T 1k3i_A 365 --------AGPSTAMNWYYTS--GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQ-D-SDATTNAH 432 (656)
T ss_dssp --------CCSSSEEEEEECS--TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSS-S-SBCCCCEE
T ss_pred --------ecCccceeeeecC--CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCC-C-CCcCCcce
Confidence 1235678999987 6777653 3332 244555554 2599999999974210 0 00112223
Q ss_pred ccEEEeCCCCCcceeeecC--CCCcCCccceeeeEcCCCcEEEecCCCCCC-CccCCCCCceeeEEEEcCCC
Q 042303 335 APALYKTKEKRHHRFQELA--PTTIPRMYHSVSVLLPDGKVLIAGSNTHDG-YKFDHKYPTELRVEKFSPPY 403 (519)
Q Consensus 335 ~~e~YdP~t~~g~~W~~~~--~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~-~~~~~~~p~~~~vEiy~Ppy 403 (519)
.+++|||+++ +|+.+. +|+.+|..|+++ ++|||+|||.||...+. +. ... ...++|+|+|..
T Consensus 433 ~v~~yd~~~~---~W~~~~~~~mp~~R~~~~~~-~l~~g~i~v~GG~~~~~~~~--~~~-~~~~v~~ydp~t 497 (656)
T 1k3i_A 433 IITLGEPGTS---PNTVFASNGLYFARTFHTSV-VLPDGSTFITGGQRRGIPFE--DST-PVFTPEIYVPEQ 497 (656)
T ss_dssp EEECCSTTSC---CEEEECTTCCSSCCBSCEEE-ECTTSCEEEECCBSBCCTTC--CCS-BCCCCEEEEGGG
T ss_pred EEEcCCCCCC---CeeEEccCCCCCCcccCCeE-ECCCCCEEEECCcccCcCcC--CCC-cccceEEEcCCC
Confidence 6899999999 999886 999999999754 56999999999965321 11 001 135799999976
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.95 E-value=4.9e-27 Score=240.86 Aligned_cols=274 Identities=13% Similarity=0.099 Sum_probs=189.9
Q ss_pred eeeeeCCCCEEEEEecccccccCcCCCCCCCCccccCCCCCCCccceeEEEEECC--CCcEEECccCC-CcccCCCeecc
Q 042303 2 HAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIE--TAKLKPLKIQT-DTWCSSGGLTV 78 (519)
Q Consensus 2 h~~ll~~~g~vl~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~yDp~--t~~w~~l~~~~-~~~c~~~~~l~ 78 (519)
|++++ -+++||++||... ....+||+. +++|+.++.++ ..++..+++..
T Consensus 13 ~~~~~-~~~~iyv~GG~~~---------------------------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~ 64 (357)
T 2uvk_A 13 GTGAI-DNDTVYIGLGSAG---------------------------TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI 64 (357)
T ss_dssp CEEEE-ETTEEEEECGGGT---------------------------TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE
T ss_pred eEEEE-ECCEEEEEeCcCC---------------------------CeEEEEccccCCCCeeECCCCCCCcCccceEEEE
Confidence 56655 5999999998541 124589998 59999999887 67787788888
Q ss_pred CCeEEEecCC-C--CC----CceEEEEeCCCCCccccCCCCCC-CccccceEEEcCCCcEEEEcCCCC------------
Q 042303 79 DGHLVGTGGY-Q--GG----ANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPDGGFIVVGGRGA------------ 138 (519)
Q Consensus 79 dG~llv~GG~-~--~g----~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~dG~V~viGG~~~------------ 138 (519)
+++|||+||. . ++ .+.+++|||. +++|+.+++ |. .+|..++++++ +++|||+||.+.
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~-~~~W~~~~~-~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 141 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK-TNSWVKLMS-HAPMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDLNE 141 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETT-TTEEEECSC-CCSSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCC-CCcEEECCC-CCCcccccceEEEE-CCEEEEEeCcCCCcCcccccchhh
Confidence 9999999998 2 21 4689999999 899999986 88 99999988886 999999999752
Q ss_pred --------------------------CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEee
Q 042303 139 --------------------------FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVT 191 (519)
Q Consensus 139 --------------------------~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~ 191 (519)
..+|+| |.+++|.. ..++..... +.+..+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~---~~~~p~~~~-------------------~~~~~~~~ 199 (357)
T 2uvk_A 142 AGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSY---AGESPWYGT-------------------AGAAVVNK 199 (357)
T ss_dssp HTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEE---EEECSSCCC-------------------BSCEEEEE
T ss_pred cCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEE---CCCCCCCCc-------------------ccccEEEE
Confidence 468999 99999953 222221110 11356677
Q ss_pred CCcEEEEeCC--------ceEEeeC--CCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCC
Q 042303 192 DGNLFIFSNN--------RSILFDP--KANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWD 261 (519)
Q Consensus 192 ~G~Ifv~Gg~--------~~~~yDp--~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~ 261 (519)
+++||++||. +.++||+ .+++|. .+++|+. +|... ..++++ .+++||++||....
T Consensus 200 ~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~~~-~~~~~-~~~~~~------------~~~~iyv~GG~~~~ 264 (357)
T 2uvk_A 200 GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPVSS-PDGVA-GGFAGI------------SNDSLIFAGGAGFK 264 (357)
T ss_dssp TTEEEEECCEEETTEECCCEEEEECC---CEEE-ECCCSST-TTCCB-SCEEEE------------ETTEEEEECCEECT
T ss_pred CCEEEEEeeecCCCcccCceEEEEecCCCCcEE-ecCCCCC-Ccccc-cceEEE------------ECCEEEEEcCcccc
Confidence 9999999984 3567865 999997 5888863 33211 122332 38999999996421
Q ss_pred cccccccc-----cccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccc
Q 042303 262 AFYYAEDK-----KQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALA 335 (519)
Q Consensus 262 ~~~~~~~~-----~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~ 335 (519)
........ ......+.++++||+. +++|+.. +|+.+|..|++++ .+++|||+||.+.. ......
T Consensus 265 ~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~-------~~~~~~ 334 (357)
T 2uvk_A 265 GSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQGRAYGVSLP-WNNSLLIIGGETAG-------GKAVTD 334 (357)
T ss_dssp THHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEE-ETTEEEEEEEECGG-------GCEEEE
T ss_pred CCcccccccceeccccccceeeEEEEecC--CCceeeCCCCCCCcccceeEE-eCCEEEEEeeeCCC-------CCEeee
Confidence 10000000 0001123578899998 7899999 9999999998755 59999999997521 122456
Q ss_pred cEEEeCCCCCcceeeecCCCC
Q 042303 336 PALYKTKEKRHHRFQELAPTT 356 (519)
Q Consensus 336 ~e~YdP~t~~g~~W~~~~~~~ 356 (519)
+++|+.+++ +|..+.+.+
T Consensus 335 v~~l~~~~~---~~~~~~~~~ 352 (357)
T 2uvk_A 335 SVLITVKDN---KVTVQNLEH 352 (357)
T ss_dssp EEEEEC-CC---SCEEEC---
T ss_pred EEEEEEcCc---EeEeeeccc
Confidence 888999999 998876653
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=8.4e-25 Score=244.82 Aligned_cols=261 Identities=12% Similarity=0.081 Sum_probs=180.2
Q ss_pred cEEECccCCCcccCCCeeccCCeEEEecCCCC-CCceEEEEeCCCCCccccCC-C----CCCCccccceEEEcC-CCcEE
Q 042303 59 KLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQG-GANTVRYLWTCDTCDWIEYP-T----ALAEPRWYSTQVTLP-DGGFI 131 (519)
Q Consensus 59 ~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~-g~~~v~~ydp~~~~~W~~~~-~----~m~~~R~y~s~~~L~-dG~V~ 131 (519)
+|...+..+..+. ++++..+++||++||... ..+++++||+. +++|+.++ + .|+.+|++|+++++. +|+||
T Consensus 378 ~~~~~~~~p~rr~-g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~-~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ly 455 (695)
T 2zwa_A 378 QLLECECPINRKF-GDVDVAGNDVFYMGGSNPYRVNEILQLSIH-YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLL 455 (695)
T ss_dssp EEEECCCTTCCBS-CEEEECSSCEEEECCBSSSBCCCEEEEEEC-SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEE
T ss_pred eEeccCCCCCCce-eEEEEECCEEEEECCCCCCCcCcEEEEECC-CCeEEEeccCCCCCCCCccccceEEEEEccCCEEE
Confidence 3444433333333 345558999999999753 35689999999 89999876 2 388999999999987 99999
Q ss_pred EEcCCCC-----CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEe-eCCcEEEEeCC---
Q 042303 132 VVGGRGA-----FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLV-TDGNLFIFSNN--- 201 (519)
Q Consensus 132 viGG~~~-----~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~-~~G~Ifv~Gg~--- 201 (519)
|+||.+. .++++| +.+++|.. ..++...+. -+..++ .+|+||++||.
T Consensus 456 v~GG~~~~~~~~~dv~~yd~~t~~W~~---~~~~p~~R~--------------------~h~~~~~~~~~iyv~GG~~~~ 512 (695)
T 2zwa_A 456 LIGGRKAPHQGLSDNWIFDMKTREWSM---IKSLSHTRF--------------------RHSACSLPDGNVLILGGVTEG 512 (695)
T ss_dssp EECCBSSTTCBCCCCEEEETTTTEEEE---CCCCSBCCB--------------------SCEEEECTTSCEEEECCBCSS
T ss_pred EEcCCCCCCCccccEEEEeCCCCcEEE---CCCCCCCcc--------------------cceEEEEcCCEEEEECCCCCC
Confidence 9999764 468999 99999953 223322211 134455 59999999997
Q ss_pred -ceEEeeCCCCeEEEEccC---CCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCC
Q 042303 202 -RSILFDPKANRVIREYPV---LTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQ 277 (519)
Q Consensus 202 -~~~~yDp~t~~w~~~~p~---~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~ 277 (519)
+.++||+.+++|. .+++ +|. +|.. .+++.+. ...++||++||...+. ...++
T Consensus 513 ~~v~~yd~~t~~W~-~~~~~g~~p~-~r~~---~~a~v~~---------~~~~~iyv~GG~~~~~----------~~~~~ 568 (695)
T 2zwa_A 513 PAMLLYNVTEEIFK-DVTPKDEFFQ-NSLV---SAGLEFD---------PVSKQGIILGGGFMDQ----------TTVSD 568 (695)
T ss_dssp CSEEEEETTTTEEE-ECCCSSGGGG-SCCB---SCEEEEE---------TTTTEEEEECCBCTTS----------SCBCC
T ss_pred CCEEEEECCCCceE-EccCCCCCCC-cccc---eeEEEEe---------CCCCEEEEECCcCCCC----------CeeeC
Confidence 6899999999998 5765 553 3432 2223321 1138999999975211 02357
Q ss_pred ceEEEEecCCCCc------eEec-cC-CcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCccee
Q 042303 278 DCGRIRITEPNPV------WKKE-MM-PTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRF 349 (519)
Q Consensus 278 s~~~~d~~~~~~~------W~~~-~M-~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W 349 (519)
++++||+. +++ |+.. +| +.+|..|+++++-||+|||+||..... .......+++|||.++ +|
T Consensus 569 ~v~~yd~~--~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~v~~yd~~t~---~W 638 (695)
T 2zwa_A 569 KAIIFKYD--AENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSG-----LFDRTNSIISLDPLSE---TL 638 (695)
T ss_dssp EEEEEEEC--TTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSC-----CCCTTTSEEEEETTTT---EE
T ss_pred cEEEEEcc--CCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCC-----CCCCCCeEEEEECCCC---eE
Confidence 89999998 577 8887 76 589999997776449999999975211 1123457899999999 99
Q ss_pred eecCCCCc--------CCccceeeeEcCCCcEEEecCCC
Q 042303 350 QELAPTTI--------PRMYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 350 ~~~~~~~~--------~R~yhs~a~LlpdG~V~v~GG~~ 380 (519)
+.+. ++. .|..|++ +++.||+|||.||+.
T Consensus 639 ~~~~-~p~~~~~~~~p~~~gh~~-~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 639 TSIP-ISRRIWEDHSLMLAGFSL-VSTSMGTIHIIGGGA 675 (695)
T ss_dssp EECC-CCHHHHHHSCCCCSSCEE-ECC---CEEEECCEE
T ss_pred EEee-ccccccCCCCccceeeeE-EEeCCCEEEEEeCCc
Confidence 9542 221 2445764 445778999999973
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.91 E-value=2.8e-23 Score=232.45 Aligned_cols=240 Identities=14% Similarity=0.140 Sum_probs=168.0
Q ss_pred CCCEEEEEecccccccCcCCCCCCCCccccCCCCCCCccceeEEEEECCCCcEEECc-c-----CCCcccCCCeecc--C
Q 042303 8 KVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLK-I-----QTDTWCSSGGLTV--D 79 (519)
Q Consensus 8 ~~g~vl~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~-~-----~~~~~c~~~~~l~--d 79 (519)
-+++||++||... . ......+||+.+++|+.++ . ++..++..+++.. +
T Consensus 396 ~~~~iyv~GG~~~---~---------------------~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~ 451 (695)
T 2zwa_A 396 AGNDVFYMGGSNP---Y---------------------RVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRN 451 (695)
T ss_dssp CSSCEEEECCBSS---S---------------------BCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTT
T ss_pred ECCEEEEECCCCC---C---------------------CcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccC
Confidence 4899999999652 1 1134679999999999887 4 3444555555555 9
Q ss_pred CeEEEecCCCC---CCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCC-ceEEe-CCCCCCCCcc
Q 042303 80 GHLVGTGGYQG---GANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAF-SYEYI-PPQGQSNKQS 154 (519)
Q Consensus 80 G~llv~GG~~~---g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~-~~E~y-P~~~~w~~~~ 154 (519)
|+|||+||... ..+++++||+. +++|+.+++ |+.+|.+|+++++.+|+|||+||.+.. .+++| |.+++|..-.
T Consensus 452 ~~lyv~GG~~~~~~~~~dv~~yd~~-t~~W~~~~~-~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 452 NQLLLIGGRKAPHQGLSDNWIFDMK-TREWSMIKS-LSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TEEEEECCBSSTTCBCCCCEEEETT-TTEEEECCC-CSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CEEEEEcCCCCCCCccccEEEEeCC-CCcEEECCC-CCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 99999999764 25789999999 899999986 999999999998779999999998653 68999 9999995211
Q ss_pred cccccchhccccccCCcccccccccccCccceEEEeeC---CcEEEEeCC---------ceEEeeCCCCe------EEEE
Q 042303 155 IYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTD---GNLFIFSNN---------RSILFDPKANR------VIRE 216 (519)
Q Consensus 155 ~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~---G~Ifv~Gg~---------~~~~yDp~t~~------w~~~ 216 (519)
...++...+. -++.++.+ ++||++||. +.++||+.+++ |. .
T Consensus 530 ~~g~~p~~r~--------------------~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~-~ 588 (695)
T 2zwa_A 530 PKDEFFQNSL--------------------VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVI-K 588 (695)
T ss_dssp CSSGGGGSCC--------------------BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEE-E
T ss_pred CCCCCCCccc--------------------ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEE-E
Confidence 1001221111 12223334 899999985 26899999999 65 6
Q ss_pred ccCCCCCCCccCCCCcEEecccccccCCccccC-CeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEecc
Q 042303 217 YPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIH-SDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEM 295 (519)
Q Consensus 217 ~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~-gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~ 295 (519)
++++|..+|.. .+++++ + ++||++||.+.... ...++.+++||+. +++|+..+
T Consensus 589 ~~~~p~~~R~~---~~~~~~------------~~~~iyv~GG~~~~~~---------~~~~~~v~~yd~~--t~~W~~~~ 642 (695)
T 2zwa_A 589 KLQHPLFQRYG---SQIKYI------------TPRKLLIVGGTSPSGL---------FDRTNSIISLDPL--SETLTSIP 642 (695)
T ss_dssp EEECGGGCCBS---CEEEEE------------ETTEEEEECCBCSSCC---------CCTTTSEEEEETT--TTEEEECC
T ss_pred cCCCCCCCccc---ceEEEe------------CCCEEEEECCccCCCC---------CCCCCeEEEEECC--CCeEEEee
Confidence 76654234542 233332 5 99999999752110 1246789999998 78999655
Q ss_pred CCcc--------eeeceeEEecCCcEEEEcCcC
Q 042303 296 MPTR--------RVMGDMTILPTGDVLLVNGAQ 320 (519)
Q Consensus 296 M~~~--------R~~~~~vvLpdG~V~viGG~~ 320 (519)
++.. |..|+++++.||+|||+||..
T Consensus 643 ~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 643 ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp CCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred ccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 5432 456777777778999999963
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.82 E-value=0.0096 Score=57.88 Aligned_cols=245 Identities=11% Similarity=0.093 Sum_probs=124.5
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCcc-ccceEEEcCCC
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPR-WYSTQVTLPDG 128 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R-~y~s~~~L~dG 128 (519)
..+||..+++....-..+..........+||+++++|+.+ ..+++||.. +.+-.. .+.... .-.+....+++
T Consensus 47 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~-~~~~~~---~~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 47 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVS-SGKCLK---TLKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCEEE---EEECCSSCEEEEEECSSS
T ss_pred EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECC-CCcEEE---EEcCCCCCEEEEEEcCCC
Confidence 4578888777654322222222234456789999998854 578899976 443211 122111 12234455789
Q ss_pred cEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEE
Q 042303 129 GFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SIL 205 (519)
Q Consensus 129 ~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~ 205 (519)
+.++.|+.++ .+.+| ..+++- . ..+.... .... .+...++|++++.|+.+ ..+
T Consensus 120 ~~l~s~~~d~-~i~iwd~~~~~~-----~-~~~~~~~----------------~~v~-~~~~~~~~~~l~~~~~d~~i~~ 175 (312)
T 4ery_A 120 NLIVSGSFDE-SVRIWDVKTGKC-----L-KTLPAHS----------------DPVS-AVHFNRDGSLIVSSSYDGLCRI 175 (312)
T ss_dssp SEEEEEETTS-CEEEEETTTCCE-----E-EEECCCS----------------SCEE-EEEECTTSSEEEEEETTSCEEE
T ss_pred CEEEEEeCCC-cEEEEECCCCEE-----E-EEecCCC----------------CcEE-EEEEcCCCCEEEEEeCCCcEEE
Confidence 9999988764 46666 443311 1 1110000 0000 12234688888888754 668
Q ss_pred eeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEec
Q 042303 206 FDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRIT 285 (519)
Q Consensus 206 yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~ 285 (519)
||..+.+....+..- ...+ -..+. .. .+++.+++|+.+ ..+..+|+.
T Consensus 176 wd~~~~~~~~~~~~~----~~~~--~~~~~--~~--------~~~~~l~~~~~d-----------------~~i~iwd~~ 222 (312)
T 4ery_A 176 WDTASGQCLKTLIDD----DNPP--VSFVK--FS--------PNGKYILAATLD-----------------NTLKLWDYS 222 (312)
T ss_dssp EETTTCCEEEEECCS----SCCC--EEEEE--EC--------TTSSEEEEEETT-----------------TEEEEEETT
T ss_pred EECCCCceeeEEecc----CCCc--eEEEE--EC--------CCCCEEEEEcCC-----------------CeEEEEECC
Confidence 999887754333110 1100 01111 11 267788887654 134456654
Q ss_pred CCCCceEe--c-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCccee-eecCCCCcCCcc
Q 042303 286 EPNPVWKK--E-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRF-QELAPTTIPRMY 361 (519)
Q Consensus 286 ~~~~~W~~--~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-~~~~~~~~~R~y 361 (519)
. .+-.. . ..............++++.++.|+.+ | .+.+||..+. +- ..+... ...
T Consensus 223 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g------------~i~vwd~~~~---~~~~~~~~h-~~~-- 281 (312)
T 4ery_A 223 K--GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-N------------LVYIWNLQTK---EIVQKLQGH-TDV-- 281 (312)
T ss_dssp T--TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-S------------CEEEEETTTC---CEEEEECCC-SSC--
T ss_pred C--CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-C------------EEEEEECCCc---hhhhhhhcc-CCc--
Confidence 2 21111 1 11111111122334688988888764 1 4689998876 32 222111 011
Q ss_pred ceeeeEcCCCcEEEecCC
Q 042303 362 HSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 362 hs~a~LlpdG~V~v~GG~ 379 (519)
-.....-|++++++.++.
T Consensus 282 v~~~~~~p~~~~l~s~~~ 299 (312)
T 4ery_A 282 VISTACHPTENIIASAAL 299 (312)
T ss_dssp EEEEEECSSSSEEEEEEC
T ss_pred EEEEeecCcCCceEEEEc
Confidence 112335689999888764
No 20
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.74 E-value=0.0028 Score=61.88 Aligned_cols=216 Identities=14% Similarity=0.065 Sum_probs=117.8
Q ss_pred CCeEEEecCCCCCCceEEEEeCCC-CCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCC--CCCcc
Q 042303 79 DGHLVGTGGYQGGANTVRYLWTCD-TCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQ--SNKQS 154 (519)
Q Consensus 79 dG~llv~GG~~~g~~~v~~ydp~~-~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~--w~~~~ 154 (519)
.|+++++|.. ...+.++|+.+ .-.|+-... .....+.+..++||++|+.+ ...+..| | +++ |.
T Consensus 4 ~~~~lv~~~~---~~~v~~~d~~tG~~~w~~~~~---~~~~~~~~~~~pdG~ilvs~---~~~V~~~d~-~G~~~W~--- 70 (276)
T 3no2_A 4 PQHLLVGGSG---WNKIAIINKDTKEIVWEYPLE---KGWECNSVAATKAGEILFSY---SKGAKMITR-DGRELWN--- 70 (276)
T ss_dssp CCEEEEECTT---CSEEEEEETTTTEEEEEEECC---TTCCCCEEEECTTSCEEEEC---BSEEEEECT-TSCEEEE---
T ss_pred CCcEEEeeCC---CCEEEEEECCCCeEEEEeCCC---ccCCCcCeEECCCCCEEEeC---CCCEEEECC-CCCEEEE---
Confidence 4688888753 36788999851 233653221 11234677888999999943 2446666 6 442 31
Q ss_pred cccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC---ceEEeeCCCCeEEEEccCCCCCCCc-cCCC
Q 042303 155 IYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN---RSILFDPKANRVIREYPVLTGGSRN-YPAS 230 (519)
Q Consensus 155 ~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~---~~~~yDp~t~~w~~~~p~~p~~~r~-~~~~ 230 (519)
...... ...+ .+..++||++++.... ....+|+.....+ .+.--...... .+..
T Consensus 71 --~~~~~~------------------~~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~-~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 71 --IAAPAG------------------CEMQ-TARILPDGNALVAWCGHPSTILEVNMKGEVLS-KTEFETGIERPHAQFR 128 (276)
T ss_dssp --EECCTT------------------CEEE-EEEECTTSCEEEEEESTTEEEEEECTTSCEEE-EEEECCSCSSGGGSCS
T ss_pred --EcCCCC------------------cccc-ccEECCCCCEEEEecCCCCEEEEEeCCCCEEE-EEeccCCCCccccccc
Confidence 110000 0001 1345689999987543 4566798655322 23210100000 0111
Q ss_pred CcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEec
Q 042303 231 GMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILP 309 (519)
Q Consensus 231 g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLp 309 (519)
+.++ + .+|.++++...+ ..+.+||+. ..-.|+.. +. . .+++..++
T Consensus 129 ~v~~-~-----------~~G~~lv~~~~~-----------------~~v~~~d~~-G~~~w~~~~~~-~---~~~~~~~~ 174 (276)
T 3no2_A 129 QINK-N-----------KKGNYLVPLFAT-----------------SEVREIAPN-GQLLNSVKLSG-T---PFSSAFLD 174 (276)
T ss_dssp CCEE-C-----------TTSCEEEEETTT-----------------TEEEEECTT-SCEEEEEECSS-C---CCEEEECT
T ss_pred CceE-C-----------CCCCEEEEecCC-----------------CEEEEECCC-CCEEEEEECCC-C---ccceeEcC
Confidence 2232 1 278888876432 245677775 35568766 31 1 12346789
Q ss_pred CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCC-CCcCCc-cceeeeEcCCCcEEEec
Q 042303 310 TGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAP-TTIPRM-YHSVSVLLPDGKVLIAG 377 (519)
Q Consensus 310 dG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~-~~~~R~-yhs~a~LlpdG~V~v~G 377 (519)
+|+++|++... ..+..+||++.+ ..|+.-.. ..-.|+ +.+.+.+++||.|||+.
T Consensus 175 ~g~~~v~~~~~-------------~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 175 NGDCLVACGDA-------------HCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TSCEEEECBTT-------------SEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCCEEEEeCCC-------------CeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 99999987542 146899999651 14654321 121233 34556678999999997
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.64 E-value=0.013 Score=58.28 Aligned_cols=270 Identities=13% Similarity=0.105 Sum_probs=137.8
Q ss_pred eeEEEEECCCCcEEECccC---CC---cccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccc-cCCCCCCCccccc
Q 042303 48 AHSVLFDIETAKLKPLKIQ---TD---TWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWI-EYPTALAEPRWYS 120 (519)
Q Consensus 48 ~~~~~yDp~t~~w~~l~~~---~~---~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~-~~~~~m~~~R~y~ 120 (519)
.....||++|+++...-.. .. .+.. +..+.++++|++.. ....+.++|+. +.+-. +++. ...++
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~-~i~~~~~~lyv~~~---~~~~v~viD~~-t~~~~~~i~~-~~~p~--- 87 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQ-SMVIRDGIGWIVVN---NSHVIFAIDIN-TFKEVGRITG-FTSPR--- 87 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEE-EEEEETTEEEEEEG---GGTEEEEEETT-TCCEEEEEEC-CSSEE---
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccce-EEEEECCEEEEEEc---CCCEEEEEECc-ccEEEEEcCC-CCCCc---
Confidence 3566899999998753210 00 1111 23446788888864 23579999987 55542 2221 22232
Q ss_pred eEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEe
Q 042303 121 TQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFS 199 (519)
Q Consensus 121 s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~G 199 (519)
..+.-+||++||....+ ..+.++ +.+.+-.. ..+.-.. . ...-.|...++.+++||+..
T Consensus 88 ~i~~~~~g~lyv~~~~~-~~v~~iD~~t~~~~~---~i~~g~~--~--------------~~~~~p~~i~~~~~~lyv~~ 147 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWD-YRIFIINPKTYEITG---YIECPDM--D--------------MESGSTEQMVQYGKYVYVNC 147 (328)
T ss_dssp EEEEEETTEEEEEEBSC-SEEEEEETTTTEEEE---EEECTTC--C--------------TTTCBCCCEEEETTEEEEEE
T ss_pred EEEEeCCCeEEEEECCC-CeEEEEECCCCeEEE---EEEcCCc--c--------------ccCCCcceEEEECCEEEEEc
Confidence 23332689999987432 355666 66542110 1111000 0 00012334445789999985
Q ss_pred ---CCceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCC
Q 042303 200 ---NNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPAL 276 (519)
Q Consensus 200 ---g~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~ 276 (519)
+....++|+.+++..+.++. . . .| .+.++ ..+|++|+..-...... .+....
T Consensus 148 ~~~~~~v~viD~~t~~~~~~i~~-g--~--~p-~~i~~------------~~dG~l~v~~~~~~~~~-------~~~~~~ 202 (328)
T 3dsm_A 148 WSYQNRILKIDTETDKVVDELTI-G--I--QP-TSLVM------------DKYNKMWTITDGGYEGS-------PYGYEA 202 (328)
T ss_dssp CTTCCEEEEEETTTTEEEEEEEC-S--S--CB-CCCEE------------CTTSEEEEEBCCBCTTC-------SSCBCC
T ss_pred CCCCCEEEEEECCCCeEEEEEEc-C--C--Cc-cceEE------------cCCCCEEEEECCCccCC-------ccccCC
Confidence 34577899999987655532 1 1 12 12221 12789888764321000 000012
Q ss_pred CceEEEEecCCCCceEec-cCCcceeeceeEEecCC-cEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCC
Q 042303 277 QDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPTG-DVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAP 354 (519)
Q Consensus 277 ~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG-~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~ 354 (519)
..+.+||+. +.+.... .++....-...++-||| ++|+.++ .+.+||+++. +.....-
T Consensus 203 ~~v~~id~~--t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----------------~v~~~d~~t~---~~~~~~~ 261 (328)
T 3dsm_A 203 PSLYRIDAE--TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----------------DIWRMPVEAD---RVPVRPF 261 (328)
T ss_dssp CEEEEEETT--TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS----------------SEEEEETTCS---SCCSSCS
T ss_pred ceEEEEECC--CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc----------------EEEEEECCCC---ceeeeee
Confidence 467788875 4444433 44332222233455655 4666543 3568999887 4421111
Q ss_pred CCc-CCccceeeeEcC-CCcEEEecCCCCCCCccCCCCCceeeEEEEcCC
Q 042303 355 TTI-PRMYHSVSVLLP-DGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPP 402 (519)
Q Consensus 355 ~~~-~R~yhs~a~Llp-dG~V~v~GG~~~~~~~~~~~~p~~~~vEiy~Pp 402 (519)
.+. ...-.+.+ +-| +|+|||+.... |. ..-+|.+|+|.
T Consensus 262 ~~~~~~~p~gi~-vdp~~g~lyva~~~~---y~------~~~~V~v~d~~ 301 (328)
T 3dsm_A 262 LEFRDTKYYGLT-VNPNNGEVYVADAID---YQ------QQGIVYRYSPQ 301 (328)
T ss_dssp BCCCSSCEEEEE-ECTTTCCEEEEECTT---SS------SEEEEEEECTT
T ss_pred ecCCCCceEEEE-EcCCCCeEEEEcccc---cc------cCCEEEEECCC
Confidence 111 12223344 456 89999996211 11 13478888876
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.64 E-value=0.015 Score=57.58 Aligned_cols=244 Identities=10% Similarity=0.092 Sum_probs=125.0
Q ss_pred EEEEECCCCcEEECccC--CCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcC
Q 042303 50 SVLFDIETAKLKPLKIQ--TDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLP 126 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~ 126 (519)
..+||..+.+......+ +..........+++.++++|+.+ ..++++|.. +.+-... +.. ...-.+++.-+
T Consensus 60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D---~~i~lWd~~-~~~~~~~---~~~~~~~~~~~~~sp 132 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD---AHIRLWDLE-NGKQIKS---IDAGPVDAWTLAFSP 132 (321)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT-TTEEEEE---EECCTTCCCCEEECT
T ss_pred EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECC-CCCEEEE---EeCCCccEEEEEECC
Confidence 34677666544322111 11111122344678888888754 578899976 4432211 111 11122455667
Q ss_pred CCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--e
Q 042303 127 DGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--S 203 (519)
Q Consensus 127 dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~ 203 (519)
||+.++.|+.++ .+.+| ...++ ....+ .. .. .... .+...++|+.++.|+.+ .
T Consensus 133 dg~~l~~g~~dg-~v~i~~~~~~~-----~~~~~-~~-~~---------------~~v~-~~~~spdg~~lasg~~dg~i 188 (321)
T 3ow8_A 133 DSQYLATGTHVG-KVNIFGVESGK-----KEYSL-DT-RG---------------KFIL-SIAYSPDGKYLASGAIDGII 188 (321)
T ss_dssp TSSEEEEECTTS-EEEEEETTTCS-----EEEEE-EC-SS---------------SCEE-EEEECTTSSEEEEEETTSCE
T ss_pred CCCEEEEEcCCC-cEEEEEcCCCc-----eeEEe-cC-CC---------------ceEE-EEEECCCCCEEEEEcCCCeE
Confidence 999999998763 56666 43321 01111 00 00 0000 12334799999888754 6
Q ss_pred EEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEE
Q 042303 204 ILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIR 283 (519)
Q Consensus 204 ~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d 283 (519)
.+||..+.+....+. + . ..+.. ++.+ ..+++++++|+.+. .+..+|
T Consensus 189 ~iwd~~~~~~~~~~~---~-h-~~~v~--~l~~----------spd~~~l~s~s~dg-----------------~i~iwd 234 (321)
T 3ow8_A 189 NIFDIATGKLLHTLE---G-H-AMPIR--SLTF----------SPDSQLLVTASDDG-----------------YIKIYD 234 (321)
T ss_dssp EEEETTTTEEEEEEC---C-C-SSCCC--EEEE----------CTTSCEEEEECTTS-----------------CEEEEE
T ss_pred EEEECCCCcEEEEEc---c-c-CCcee--EEEE----------cCCCCEEEEEcCCC-----------------eEEEEE
Confidence 789999887544332 1 1 11111 1211 12788899888651 344566
Q ss_pred ecCCCCceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCccee-eecCCCCcCCcc
Q 042303 284 ITEPNPVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRF-QELAPTTIPRMY 361 (519)
Q Consensus 284 ~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-~~~~~~~~~R~y 361 (519)
+.. ...... .-...... +....|||+.++.|+.+. ++.+||..+. +- ..+... ...
T Consensus 235 ~~~--~~~~~~~~~h~~~v~-~~~~sp~~~~l~s~s~D~-------------~v~iwd~~~~---~~~~~~~~h---~~~ 292 (321)
T 3ow8_A 235 VQH--ANLAGTLSGHASWVL-NVAFCPDDTHFVSSSSDK-------------SVKVWDVGTR---TCVHTFFDH---QDQ 292 (321)
T ss_dssp TTT--CCEEEEECCCSSCEE-EEEECTTSSEEEEEETTS-------------CEEEEETTTT---EEEEEECCC---SSC
T ss_pred CCC--cceeEEEcCCCCceE-EEEECCCCCEEEEEeCCC-------------cEEEEeCCCC---EEEEEEcCC---CCc
Confidence 542 222111 11111121 224568999999987641 4689998776 32 122111 111
Q ss_pred ceeeeEcCCCcEEEecCCC
Q 042303 362 HSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 362 hs~a~LlpdG~V~v~GG~~ 380 (519)
-......|||+.++.||..
T Consensus 293 v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 293 VWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEEEEECTTSSEEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCC
Confidence 1223456899999998864
No 23
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.53 E-value=0.013 Score=57.92 Aligned_cols=91 Identities=11% Similarity=0.014 Sum_probs=53.6
Q ss_pred eEEEEECCCCcEEECccCC--CcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcC
Q 042303 49 HSVLFDIETAKLKPLKIQT--DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLP 126 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~ 126 (519)
...+||..++++..+.... ........+.+||+++++|+.+ ..+++||.. +.++............-.+++..+
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---g~i~vwd~~-~~~~~~~~~~~~~~~~v~~~~~~~ 106 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD---RNAYVWTLK-GRTWKPTLVILRINRAARCVRWAP 106 (372)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT---SCEEEEEEE-TTEEEEEEECCCCSSCEEEEEECT
T ss_pred EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC---CeEEEEECC-CCeeeeeEEeecCCCceeEEEECC
Confidence 3558888888765554332 2122233456789999998753 468888876 555543221011222233455557
Q ss_pred CCcEEEEcCCCCCceEEe
Q 042303 127 DGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 127 dG~V~viGG~~~~~~E~y 144 (519)
+|+.+++|+.++ .+.+|
T Consensus 107 ~~~~l~~~~~d~-~v~i~ 123 (372)
T 1k8k_C 107 NEKKFAVGSGSR-VISIC 123 (372)
T ss_dssp TSSEEEEEETTS-SEEEE
T ss_pred CCCEEEEEeCCC-EEEEE
Confidence 899999988764 45555
No 24
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.51 E-value=0.0091 Score=58.21 Aligned_cols=207 Identities=14% Similarity=0.116 Sum_probs=109.2
Q ss_pred eEEEEECCCCcEEECccCCC-cccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTD-TWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~d 127 (519)
...++|++|++..---.... ..+....+++||++|+.+ .+.+..|||.....|.-.. ......+++..++|
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~~G~~~W~~~~---~~~~~~~~~~~~~d 87 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY-----SKGAKMITRDGRELWNIAA---PAGCEMQTARILPD 87 (276)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEEC-----BSEEEEECTTSCEEEEEEC---CTTCEEEEEEECTT
T ss_pred EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeC-----CCCEEEECCCCCEEEEEcC---CCCccccccEECCC
Confidence 34578888875321111112 235556788999999953 2568999995344575322 11112356778899
Q ss_pred CcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeC--CceE
Q 042303 128 GGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSN--NRSI 204 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg--~~~~ 204 (519)
|++++........+-.+ | +++... ..++-..... .......+...++|++++... ..+.
T Consensus 88 G~~lv~~~~~~~~v~~vd~-~Gk~l~---~~~~~~~~~~--------------~~~~~~~v~~~~~G~~lv~~~~~~~v~ 149 (276)
T 3no2_A 88 GNALVAWCGHPSTILEVNM-KGEVLS---KTEFETGIER--------------PHAQFRQINKNKKGNYLVPLFATSEVR 149 (276)
T ss_dssp SCEEEEEESTTEEEEEECT-TSCEEE---EEEECCSCSS--------------GGGSCSCCEECTTSCEEEEETTTTEEE
T ss_pred CCEEEEecCCCCEEEEEeC-CCCEEE---EEeccCCCCc--------------ccccccCceECCCCCEEEEecCCCEEE
Confidence 99999865422233334 4 332100 0111000000 000011234567899888764 3477
Q ss_pred EeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEe
Q 042303 205 LFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRI 284 (519)
Q Consensus 205 ~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~ 284 (519)
+||++.+..+ .+.. + ..| .++. .++ ++.+++++... ..+..+|+
T Consensus 150 ~~d~~G~~~w-~~~~-~----~~~-~~~~-~~~-----------~g~~~v~~~~~-----------------~~v~~~d~ 193 (276)
T 3no2_A 150 EIAPNGQLLN-SVKL-S----GTP-FSSA-FLD-----------NGDCLVACGDA-----------------HCFVQLNL 193 (276)
T ss_dssp EECTTSCEEE-EEEC-S----SCC-CEEE-ECT-----------TSCEEEECBTT-----------------SEEEEECT
T ss_pred EECCCCCEEE-EEEC-C----CCc-ccee-EcC-----------CCCEEEEeCCC-----------------CeEEEEeC
Confidence 8999854433 2321 1 111 2222 222 78888876543 13456776
Q ss_pred cCCCCceEec--cCCccee--eceeEEecCCcEEEEc
Q 042303 285 TEPNPVWKKE--MMPTRRV--MGDMTILPTGDVLLVN 317 (519)
Q Consensus 285 ~~~~~~W~~~--~M~~~R~--~~~~vvLpdG~V~viG 317 (519)
....-.|+.. ..+..|. ..++.+++||.|||..
T Consensus 194 ~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 194 ESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred cCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 5334568864 3332231 2344678999999987
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.48 E-value=0.016 Score=56.05 Aligned_cols=246 Identities=13% Similarity=0.109 Sum_probs=125.1
Q ss_pred eEEEEECCCCcEE-ECcc----CCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCc-cccceE
Q 042303 49 HSVLFDIETAKLK-PLKI----QTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEP-RWYSTQ 122 (519)
Q Consensus 49 ~~~~yDp~t~~w~-~l~~----~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~-R~y~s~ 122 (519)
...+||..+++.. .+.. .+..........+|++.+++|+.+ ..+.+||.. +.+...... +... ..-.+.
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~-~~~~~~~~~-~~~~~~~i~~~ 147 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---STLSIWDLA-APTPRIKAE-LTSSAPACYAL 147 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---SEEEEEECC-CC--EEEEE-EECSSSCEEEE
T ss_pred eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEEECC-CCCcceeee-cccCCCceEEE
Confidence 4557887765421 1111 112222233456789888888743 578899987 554322221 2211 112344
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC
Q 042303 123 VTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN 201 (519)
Q Consensus 123 ~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~ 201 (519)
+..++|+.+++|+.++ .+.+| ..+.+. ...+.... .... .+...++|+.++.++.
T Consensus 148 ~~~~~~~~l~~~~~dg-~v~~~d~~~~~~------~~~~~~~~----------------~~i~-~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDG-NIAVWDLHNQTL------VRQFQGHT----------------DGAS-CIDISNDGTKLWTGGL 203 (337)
T ss_dssp EECTTSSEEEEEETTS-CEEEEETTTTEE------EEEECCCS----------------SCEE-EEEECTTSSEEEEEET
T ss_pred EECCCCCEEEEEeCCC-cEEEEeCCCCce------eeeeeccc----------------CceE-EEEECCCCCEEEEEec
Confidence 5567899999988764 46666 443211 11110000 0000 1233468888888775
Q ss_pred c--eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCce
Q 042303 202 R--SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDC 279 (519)
Q Consensus 202 ~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~ 279 (519)
+ ..+||..+.+-...+. .+. . -.++.+ ..+++.+++|+.+ ..+
T Consensus 204 dg~i~~~d~~~~~~~~~~~-~~~--~-----v~~~~~----------s~~~~~l~~~~~~-----------------~~i 248 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHD-FTS--Q-----IFSLGY----------CPTGEWLAVGMES-----------------SNV 248 (337)
T ss_dssp TSEEEEEETTTTEEEEEEE-CSS--C-----EEEEEE----------CTTSSEEEEEETT-----------------SCE
T ss_pred CCcEEEEECCCCceEeeec-CCC--c-----eEEEEE----------CCCCCEEEEEcCC-----------------CcE
Confidence 4 5689998877543321 110 0 011111 1267888888654 134
Q ss_pred EEEEecCCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCC
Q 042303 280 GRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPR 359 (519)
Q Consensus 280 ~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R 359 (519)
..+|+... ...+... ..... ......|||+.+++++.+ | .+.+||..+. +-.... ....
T Consensus 249 ~~~~~~~~-~~~~~~~-~~~~v-~~~~~~~~~~~l~~~~~d-g------------~i~~~~~~~~---~~~~~~--~~~~ 307 (337)
T 1gxr_A 249 EVLHVNKP-DKYQLHL-HESCV-LSLKFAYCGKWFVSTGKD-N------------LLNAWRTPYG---ASIFQS--KESS 307 (337)
T ss_dssp EEEETTSS-CEEEECC-CSSCE-EEEEECTTSSEEEEEETT-S------------EEEEEETTTC---CEEEEE--ECSS
T ss_pred EEEECCCC-CeEEEcC-Cccce-eEEEECCCCCEEEEecCC-C------------cEEEEECCCC---eEEEEe--cCCC
Confidence 56666521 1111111 11112 233457899999988753 1 4689998876 332111 1111
Q ss_pred ccceeeeEcCCCcEEEecCCC
Q 042303 360 MYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 360 ~yhs~a~LlpdG~V~v~GG~~ 380 (519)
. -....+.|||+.+++|+..
T Consensus 308 ~-v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 308 S-VLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp C-EEEEEECTTSCEEEEEETT
T ss_pred c-EEEEEECCCCCEEEEecCC
Confidence 1 1223457899999988764
No 26
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.48 E-value=0.015 Score=57.71 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=122.0
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCc--cccCCCCCCCcccc-ceEEEc
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCD--WIEYPTALAEPRWY-STQVTL 125 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~--W~~~~~~m~~~R~y-~s~~~L 125 (519)
...+||..+.+-...-..+..........++|+.+++||.+ ..+++||.. +.+ ..... .+...... .++...
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~-~~~~~~~~~~-~~~~h~~~v~~~~~~ 152 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLK-TREGNVRVSR-ELAGHTGYLSCCRFL 152 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETT-TCSBSCEEEE-EEECCSSCEEEEEEE
T ss_pred cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECc-cCCCcceeEE-EecCCCccEEEEEEC
Confidence 35578887765433222222222234566799999999864 578889875 322 11110 11111111 223334
Q ss_pred CCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--
Q 042303 126 PDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR-- 202 (519)
Q Consensus 126 ~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~-- 202 (519)
++++ ++.|+.+ .++.+| ..+++ ....+.. +. .... .+...++|++++.|+.+
T Consensus 153 ~~~~-l~s~s~d-~~i~~wd~~~~~------~~~~~~~-------h~---------~~v~-~~~~~~~~~~l~sg~~d~~ 207 (340)
T 1got_B 153 DDNQ-IVTSSGD-TTCALWDIETGQ------QTTTFTG-------HT---------GDVM-SLSLAPDTRLFVSGACDAS 207 (340)
T ss_dssp ETTE-EEEEETT-SCEEEEETTTTE------EEEEECC-------CS---------SCEE-EEEECTTSSEEEEEETTSC
T ss_pred CCCc-EEEEECC-CcEEEEECCCCc------EEEEEcC-------CC---------CceE-EEEECCCCCEEEEEeCCCc
Confidence 4666 4555544 456677 44331 1111100 00 0000 12344689999988754
Q ss_pred eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEE
Q 042303 203 SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRI 282 (519)
Q Consensus 203 ~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~ 282 (519)
..+||..+.+-...+. + ... .-.++.+ ..+++.+++|+.+ ..+..+
T Consensus 208 v~~wd~~~~~~~~~~~---~-h~~---~v~~v~~----------~p~~~~l~s~s~d-----------------~~v~iw 253 (340)
T 1got_B 208 AKLWDVREGMCRQTFT---G-HES---DINAICF----------FPNGNAFATGSDD-----------------ATCRLF 253 (340)
T ss_dssp EEEEETTTCSEEEEEC---C-CSS---CEEEEEE----------CTTSSEEEEEETT-----------------SCEEEE
T ss_pred EEEEECCCCeeEEEEc---C-CcC---CEEEEEE----------cCCCCEEEEEcCC-----------------CcEEEE
Confidence 6789998876443331 1 110 0011211 1267888888765 134456
Q ss_pred EecCCCCceEec-cCCcc-eeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCc
Q 042303 283 RITEPNPVWKKE-MMPTR-RVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRM 360 (519)
Q Consensus 283 d~~~~~~~W~~~-~M~~~-R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~ 360 (519)
|+.. .+-... ..... ..-.+...-|||+++++|+.+ + .+.+||..+.. .-..+.... .+
T Consensus 254 d~~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~~--~~~~~~~h~-~~- 314 (340)
T 1got_B 254 DLRA--DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-F------------NCNVWDALKAD--RAGVLAGHD-NR- 314 (340)
T ss_dssp ETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-S------------EEEEEETTTCC--EEEEEECCS-SC-
T ss_pred ECCC--CcEEEEEccCCcccceEEEEECCCCCEEEEECCC-C------------eEEEEEcccCc--EeeEeecCC-Cc-
Confidence 6542 111111 11110 011122346899999998764 1 46899987651 222222111 11
Q ss_pred cceeeeEcCCCcEEEecCCCC
Q 042303 361 YHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 361 yhs~a~LlpdG~V~v~GG~~~ 381 (519)
-.+...-|||+.++.||...
T Consensus 315 -v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 315 -VSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp -EEEEEECTTSSCEEEEETTS
T ss_pred -EEEEEEcCCCCEEEEEcCCc
Confidence 12233568999999988643
No 27
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.46 E-value=0.062 Score=52.53 Aligned_cols=248 Identities=11% Similarity=0.043 Sum_probs=118.9
Q ss_pred eeEEEEECCCCcEEECccCCCcccCCCeeccCCe-EEEecCCCCCCceEEEEeCCCCCccccCCCCCCCcc--------c
Q 042303 48 AHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGH-LVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPR--------W 118 (519)
Q Consensus 48 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R--------~ 118 (519)
.....||+.+++....-... ....+..+.+||+ +++.+.. ...+.+||+. +.+-...-. +.... .
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~-~~~~~~~~~-~~~~~~~~~~~~~~ 142 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTV---NSAVTAIDAK-TGEVKGRLV-LDDRKRTEEVRPLQ 142 (353)
T ss_dssp EEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETT---TTEEEEEETT-TCCEEEEEE-SCCCCCCSSCCCCE
T ss_pred ccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecC---CCEEEEEeCC-CCeeEEEEe-cCCCccccccCCCC
Confidence 35668999988764432221 1233445667886 6666543 2478899987 444221111 21111 1
Q ss_pred cceEEEcCCCc-EEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccce-EEEeeCCcE
Q 042303 119 YSTQVTLPDGG-FIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPF-VNLVTDGNL 195 (519)
Q Consensus 119 y~s~~~L~dG~-V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~-~~~~~~G~I 195 (519)
-...+.-+||+ +|+.+......+.+| +.+.+-. ...+.. . ..|. ....+||+.
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~---~~~~~~---~------------------~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLK---TAIQNT---G------------------KMSTGLALDSEGKR 198 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE---EEECCC---C------------------TTCCCCEEETTTTE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceE---EEecCC---C------------------CccceEEECCCCCE
Confidence 12345556776 555542333456666 5543110 011100 0 0011 234567775
Q ss_pred EEEeCC--ceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCe-EEEEcCCCCCccccccccccc
Q 042303 196 FIFSNN--RSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSD-ILVCGGAAWDAFYYAEDKKQF 272 (519)
Q Consensus 196 fv~Gg~--~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gk-I~v~GG~~~~~~~~~~~~~~~ 272 (519)
++++.. ...+||..+.+....++.-..++..++ .+ .++- .+++ +|+.....
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~-~~~s-----------~dg~~l~~~~~~~------------- 252 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEHFF-IN-ISLD-----------TARQRAFITDSKA------------- 252 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCE-EE-EEEE-----------TTTTEEEEEESSS-------------
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCccc-ce-EEEC-----------CCCCEEEEEeCCC-------------
Confidence 444443 356799998875543322111111111 01 1111 1444 65554221
Q ss_pred ccCCCceEEEEecCCCCceEec-cCCcceeeceeEEecCCc-EEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceee
Q 042303 273 WPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPTGD-VLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQ 350 (519)
Q Consensus 273 ~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~-V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~ 350 (519)
..+..+|+. +.+.... +...++ ....-|||+ +|+.+... ..+.+||..+. +..
T Consensus 253 ----~~v~~~d~~--~~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~~-------------~~v~~~d~~~~---~~~ 307 (353)
T 3vgz_A 253 ----AEVLVVDTR--NGNILAKVAAPESL---AVLFNPARNEAYVTHRQA-------------GKVSVIDAKSY---KVV 307 (353)
T ss_dssp ----SEEEEEETT--TCCEEEEEECSSCC---CEEEETTTTEEEEEETTT-------------TEEEEEETTTT---EEE
T ss_pred ----CEEEEEECC--CCcEEEEEEcCCCc---eEEECCCCCEEEEEECCC-------------CeEEEEECCCC---eEE
Confidence 245567765 3333333 444432 334678998 66665432 15689999887 543
Q ss_pred ecCCCCcCCccceeeeEcCCCc-EEEecCC
Q 042303 351 ELAPTTIPRMYHSVSVLLPDGK-VLIAGSN 379 (519)
Q Consensus 351 ~~~~~~~~R~yhs~a~LlpdG~-V~v~GG~ 379 (519)
..- +....-++.+ +-|||+ ||++...
T Consensus 308 ~~~--~~~~~~~~~~-~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 308 KTF--DTPTHPNSLA-LSADGKTLYVSVKQ 334 (353)
T ss_dssp EEE--ECCSEEEEEE-ECTTSCEEEEEEEC
T ss_pred EEE--ecCCCCCeEE-EcCCCCEEEEEEcc
Confidence 221 1122223333 568998 7777654
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.46 E-value=0.026 Score=55.27 Aligned_cols=273 Identities=10% Similarity=0.042 Sum_probs=127.4
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCc
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGG 129 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~ 129 (519)
..+||..+++....-..+..........+|++.+++|+.+ ..+.+||.. +.+.... +.....-.+.+..++|+
T Consensus 56 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~---~~~~~~v~~~~~~~~~~ 128 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD---YSIKLWDVS-NGQCVAT---WKSPVPVKRVEFSPCGN 128 (369)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---TEEEEEETT-TCCEEEE---EECSSCEEEEEECTTSS
T ss_pred EEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC-CCcEEEE---eecCCCeEEEEEccCCC
Confidence 4578887766533222122222223456789999988753 478899976 4433221 22233334566667999
Q ss_pred EEEEcCCC----CCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--
Q 042303 130 FIVVGGRG----AFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR-- 202 (519)
Q Consensus 130 V~viGG~~----~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~-- 202 (519)
.+++++.+ ...+.+| .....-......... ...... .++. .....-.+...++|+.++.|+.+
T Consensus 129 ~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~-~~~~~~-~~~~--------~~~~~~~~~~~~~~~~l~~~~~dg~ 198 (369)
T 3zwl_B 129 YFLAILDNVMKNPGSINIYEIERDSATHELTKVSE-EPIHKI-ITHE--------GLDAATVAGWSTKGKYIIAGHKDGK 198 (369)
T ss_dssp EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECS-SCSEEE-ECCT--------TCCCEEEEEECGGGCEEEEEETTSE
T ss_pred EEEEecCCccCCCCEEEEEEecCCccceeeccccc-ceeeec-cCCc--------CccceeEEEEcCCCCEEEEEcCCCE
Confidence 99888765 1345555 322211000000000 000000 0000 00000112334688888887654
Q ss_pred eEEeeCCC-CeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEE
Q 042303 203 SILFDPKA-NRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGR 281 (519)
Q Consensus 203 ~~~yDp~t-~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~ 281 (519)
..+||..+ .+....+..- .. .-.++.+ ..+++.+++|+.+ ..+..
T Consensus 199 i~i~d~~~~~~~~~~~~~~----~~---~v~~~~~----------~~~~~~l~~~~~d-----------------~~i~v 244 (369)
T 3zwl_B 199 ISKYDVSNNYEYVDSIDLH----EK---SISDMQF----------SPDLTYFITSSRD-----------------TNSFL 244 (369)
T ss_dssp EEEEETTTTTEEEEEEECC----SS---CEEEEEE----------CTTSSEEEEEETT-----------------SEEEE
T ss_pred EEEEECCCCcEeEEEEecC----CC---ceeEEEE----------CCCCCEEEEecCC-----------------ceEEE
Confidence 56899988 4433222111 00 0011111 1267778877654 13445
Q ss_pred EEecCCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCcc-CCCCCccccEEEeCCCCCcceeeecCCCCcCCc
Q 042303 282 IRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWN-DAEEPALAPALYKTKEKRHHRFQELAPTTIPRM 360 (519)
Q Consensus 282 ~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~-~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~ 360 (519)
+|+.. .+.... +............|+|+.+++|+...+..-+. ........+.+||..+.. .-..+... ..
T Consensus 245 ~d~~~--~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~---~~ 316 (369)
T 3zwl_B 245 VDVST--LQVLKK-YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE--EIGRVQGH---FG 316 (369)
T ss_dssp EETTT--CCEEEE-EECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC--EEEEEECC---SS
T ss_pred EECCC--Cceeee-ecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc--chhheecc---cC
Confidence 66542 222211 11111122335679999999988653211110 011122357889987761 11222111 11
Q ss_pred cceeeeEcCCCcEEEecCCCC
Q 042303 361 YHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 361 yhs~a~LlpdG~V~v~GG~~~ 381 (519)
.-.....-|||+.+++|+..+
T Consensus 317 ~v~~~~~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 317 PLNTVAISPQGTSYASGGEDG 337 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTS
T ss_pred cEEEEEECCCCCEEEEEcCCC
Confidence 112234578999999998643
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.36 E-value=0.014 Score=56.64 Aligned_cols=222 Identities=14% Similarity=0.141 Sum_probs=115.8
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCC---CCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTAL---AEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQS 150 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m---~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w 150 (519)
.+.+||+++++|+ + ..+++||.. +......-..+ .....-.+++..+||+.+++|+.+ ..+.+| ..+++.
T Consensus 58 ~~~~~~~~l~~~~-d---g~i~iw~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 58 TISNPTRHVYTGG-K---GCVKVWDIS-HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-STLSIWDLAAPTP 131 (337)
T ss_dssp EECSSSSEEEEEC-B---SEEEEEETT-STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-SEEEEEECCCC--
T ss_pred EEecCCcEEEEcC-C---CeEEEEECC-CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEECCCCCc
Confidence 4557899999987 2 478899976 33221111001 122333455666789999988765 356677 544321
Q ss_pred CCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC--ceEEeeCCCCeEEEEccCCCCCCCccC
Q 042303 151 NKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN--RSILFDPKANRVIREYPVLTGGSRNYP 228 (519)
Q Consensus 151 ~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~--~~~~yDp~t~~w~~~~p~~p~~~r~~~ 228 (519)
. ....+.... .... .+...++|+.++.|+. ...+||..+.+....+.... .
T Consensus 132 ~----~~~~~~~~~----------------~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~----~-- 184 (337)
T 1gxr_A 132 R----IKAELTSSA----------------PACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT----D-- 184 (337)
T ss_dssp E----EEEEEECSS----------------SCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS----S--
T ss_pred c----eeeecccCC----------------CceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeeccc----C--
Confidence 1 111110000 0000 1233468888888765 46789999887554332111 0
Q ss_pred CCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceeeceeEE
Q 042303 229 ASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTI 307 (519)
Q Consensus 229 ~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vv 307 (519)
.-.++.+ ..+++.+++|+.+ ..+..+|+.. .+-... ....+ -.....
T Consensus 185 -~i~~~~~----------~~~~~~l~~~~~d-----------------g~i~~~d~~~--~~~~~~~~~~~~--v~~~~~ 232 (337)
T 1gxr_A 185 -GASCIDI----------SNDGTKLWTGGLD-----------------NTVRSWDLRE--GRQLQQHDFTSQ--IFSLGY 232 (337)
T ss_dssp -CEEEEEE----------CTTSSEEEEEETT-----------------SEEEEEETTT--TEEEEEEECSSC--EEEEEE
T ss_pred -ceEEEEE----------CCCCCEEEEEecC-----------------CcEEEEECCC--CceEeeecCCCc--eEEEEE
Confidence 0111111 1267777777654 1345666642 221111 22211 123345
Q ss_pred ecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCC
Q 042303 308 LPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 308 LpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 380 (519)
.|||+.+++|+.+ + .+.+||..+. +-..+... . ..-......|||+.+++|+..
T Consensus 233 s~~~~~l~~~~~~-~------------~i~~~~~~~~---~~~~~~~~--~-~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 233 CPTGEWLAVGMES-S------------NVEVLHVNKP---DKYQLHLH--E-SCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp CTTSSEEEEEETT-S------------CEEEEETTSS---CEEEECCC--S-SCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCEEEEEcCC-C------------cEEEEECCCC---CeEEEcCC--c-cceeEEEECCCCCEEEEecCC
Confidence 6899999998753 1 4689998876 32222111 1 111233457899999998763
No 30
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.35 E-value=0.081 Score=52.81 Aligned_cols=250 Identities=14% Similarity=0.153 Sum_probs=125.1
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCc---cccCCCCCCC-ccccceEEE
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCD---WIEYPTALAE-PRWYSTQVT 124 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~---W~~~~~~m~~-~R~y~s~~~ 124 (519)
...+||..+.+....-..+..+-....+.++|..+++||.+ ..+.+|+.. ... .......+.. ...-.++..
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~-~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLT-FDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECC-CCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEe-ccccccccccceeeeccCCcEEEEEE
Confidence 45578887776543322333333344567899999999865 567788754 211 0000000111 111123344
Q ss_pred cCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEee--CCcEEEEeCC
Q 042303 125 LPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVT--DGNLFIFSNN 201 (519)
Q Consensus 125 L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~--~G~Ifv~Gg~ 201 (519)
.++++.++.|+.+ .++.+| ..+++. ...+.. +. .... .....+ +|+.++.|+.
T Consensus 163 ~~~~~~l~t~s~D-~~v~lwd~~~~~~------~~~~~~--h~--------------~~v~-~~~~~~~~~g~~l~sgs~ 218 (354)
T 2pbi_B 163 TNSDMQILTASGD-GTCALWDVESGQL------LQSFHG--HG--------------ADVL-CLDLAPSETGNTFVSGGC 218 (354)
T ss_dssp CSSSSEEEEEETT-SEEEEEETTTCCE------EEEEEC--CS--------------SCEE-EEEECCCSSCCEEEEEET
T ss_pred eCCCCEEEEEeCC-CcEEEEeCCCCeE------EEEEcC--CC--------------CCeE-EEEEEeCCCCCEEEEEeC
Confidence 4678777777765 467777 544321 111100 00 0000 011223 5788888875
Q ss_pred c--eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCce
Q 042303 202 R--SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDC 279 (519)
Q Consensus 202 ~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~ 279 (519)
+ ..+||..+.+..+.+.. ... .-.++.+ ..+++.++.|+.+ .++
T Consensus 219 Dg~v~~wd~~~~~~~~~~~~----h~~---~v~~v~~----------~p~~~~l~s~s~D-----------------~~v 264 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQAFET----HES---DVNSVRY----------YPSGDAFASGSDD-----------------ATC 264 (354)
T ss_dssp TSCEEEEETTTCCEEEEECC----CSS---CEEEEEE----------CTTSSEEEEEETT-----------------SCE
T ss_pred CCeEEEEECCCCcEEEEecC----CCC---CeEEEEE----------eCCCCEEEEEeCC-----------------CeE
Confidence 4 67899998876543321 111 0011211 1267788888765 134
Q ss_pred EEEEecCCCCceEec-cCCccee-eceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCc
Q 042303 280 GRIRITEPNPVWKKE-MMPTRRV-MGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTI 357 (519)
Q Consensus 280 ~~~d~~~~~~~W~~~-~M~~~R~-~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~ 357 (519)
..+|+.. .+-... .-..... -.....-|+|+++++|+.+. ++.+||..+.. .-..+...
T Consensus 265 ~lwd~~~--~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~-------------~i~vwd~~~~~--~~~~l~~h-- 325 (354)
T 2pbi_B 265 RLYDLRA--DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY-------------TINVWDVLKGS--RVSILFGH-- 325 (354)
T ss_dssp EEEETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-------------CEEEEETTTCS--EEEEECCC--
T ss_pred EEEECCC--CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC-------------cEEEEECCCCc--eEEEEECC--
Confidence 5566642 211111 1111011 11223468999999987541 46899986651 22222211
Q ss_pred CCccceeeeEcCCCcEEEecCCC
Q 042303 358 PRMYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 358 ~R~yhs~a~LlpdG~V~v~GG~~ 380 (519)
...-.....-|||+.++.|+..
T Consensus 326 -~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 326 -ENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp -SSCEEEEEECTTSSCEEEEETT
T ss_pred -CCcEEEEEECCCCCEEEEEcCC
Confidence 1112233456999999999864
No 31
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.33 E-value=0.029 Score=56.97 Aligned_cols=93 Identities=11% Similarity=0.034 Sum_probs=50.5
Q ss_pred eEEEEECCCCcEEECccC-----CCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceE
Q 042303 49 HSVLFDIETAKLKPLKIQ-----TDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQ 122 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~-----~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~ 122 (519)
...+||+.+++....... +........+.++|+++++++.. ..+++||.. +.+.... +. ....-.+.
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~v~~~d~~-~~~~~~~---~~~~~~~~~~~ 217 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---NAVHVFDLK-TLAYKAT---VDLTGKWSKIL 217 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---TEEEEEETT-TCCEEEE---EECSSSSEEEE
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---CEEEEEECC-CceEEEE---EcCCCCCeeEE
Confidence 366899999887653221 11111223445689999988742 578999986 4432211 21 11222344
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCC
Q 042303 123 VTLPDGGFIVVGGRGAFSYEYI-PPQG 148 (519)
Q Consensus 123 ~~L~dG~V~viGG~~~~~~E~y-P~~~ 148 (519)
+.-+||+.+++.+.....+.+| +.++
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 4556777554444333466677 5543
No 32
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.26 E-value=0.014 Score=57.66 Aligned_cols=94 Identities=7% Similarity=-0.120 Sum_probs=52.6
Q ss_pred eeEEEEECCCCcEEECccCCCccc-CCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEc
Q 042303 48 AHSVLFDIETAKLKPLKIQTDTWC-SSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTL 125 (519)
Q Consensus 48 ~~~~~yDp~t~~w~~l~~~~~~~c-~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L 125 (519)
.+...+|+++++++.+........ ...++-+||+||+++.. .....+.+||.. +.++..+.. +.. ...-...+.-
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~-~~~~~v~~~~~~-~g~~~~~~~-~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE-DDEGGIAAWQID-GQTAHKLNT-VVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE-TTEEEEEEEEEE-TTEEEEEEE-EEEESCCCSEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec-CCCceEEEEEec-CCcEEEeee-eecCCCCCEEEEEC
Confidence 456678999999877543322222 22345679997766531 123578888876 555544321 111 1222235556
Q ss_pred CCCcEEEEcCCCCCceEEe
Q 042303 126 PDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 126 ~dG~V~viGG~~~~~~E~y 144 (519)
+||+.+++.+.....+.+|
T Consensus 95 pdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp TTTTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEE
Confidence 7898555554444556666
No 33
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.26 E-value=0.027 Score=57.58 Aligned_cols=136 Identities=15% Similarity=0.127 Sum_probs=73.3
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~d 127 (519)
...+||..+++....-..+........+.++|+++++|+.+ ..+++||.. +.+-. .. +.. ...-.+++..++
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D---~~i~iwd~~-~~~~~--~~-~~~h~~~V~~v~~~p~ 203 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD---MTIKLWDFQ-GFECI--RT-MHGHDHNVSSVSIMPN 203 (410)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT---SCCCEEETT-SSCEE--EC-CCCCSSCEEEEEECSS
T ss_pred eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCC-CCcee--EE-EcCCCCCEEEEEEeCC
Confidence 34578888776432211121111223445789999999864 467888876 43322 11 322 122234556678
Q ss_pred CcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eE
Q 042303 128 GGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SI 204 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~ 204 (519)
|+.++.|+.+ .++.+| ..++.. ...+ .... .. .-.+...++|++++.|+.+ ..
T Consensus 204 ~~~l~s~s~D-~~i~~wd~~~~~~-----~~~~-~~h~----------------~~-v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 204 GDHIVSASRD-KTIKMWEVQTGYC-----VKTF-TGHR----------------EW-VRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp SSEEEEEETT-SEEEEEETTTCCE-----EEEE-ECCS----------------SC-EEEEEECTTSSEEEEEETTSCEE
T ss_pred CCEEEEEeCC-CeEEEEECCCCcE-----EEEE-eCCC----------------cc-EEEEEECCCCCEEEEEcCCCeEE
Confidence 9999988876 456677 444311 1111 0000 00 0012234689998888753 66
Q ss_pred EeeCCCCeEEE
Q 042303 205 LFDPKANRVIR 215 (519)
Q Consensus 205 ~yDp~t~~w~~ 215 (519)
+||..+.+...
T Consensus 260 vwd~~~~~~~~ 270 (410)
T 1vyh_C 260 VWVVATKECKA 270 (410)
T ss_dssp EEETTTCCEEE
T ss_pred EEECCCCceee
Confidence 88988876543
No 34
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.14 E-value=0.022 Score=57.58 Aligned_cols=237 Identities=8% Similarity=0.016 Sum_probs=116.4
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCC-CCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTAL-AEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNK 152 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m-~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~ 152 (519)
..-+||+++++|+.+ ..+++||.. +.+-... + .....-.+++..+||+.++.|+.+ ..+.+| ..+.+-
T Consensus 104 ~~~~~~~~l~~~~~d---g~i~iwd~~-~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~s~d-~~i~iwd~~~~~~-- 173 (420)
T 3vl1_A 104 TAKLQMRRFILGTTE---GDIKVLDSN-FNLQREI---DQAHVSEITKLKFFPSGEALISSSQD-MQLKIWSVKDGSN-- 173 (420)
T ss_dssp EECSSSCEEEEEETT---SCEEEECTT-SCEEEEE---TTSSSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTCCC--
T ss_pred EEecCCCEEEEEECC---CCEEEEeCC-Ccceeee---cccccCccEEEEECCCCCEEEEEeCC-CeEEEEeCCCCcC--
Confidence 345689999998753 468899976 4432221 2 122223345566799999988876 356677 443311
Q ss_pred cccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCC
Q 042303 153 QSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPAS 230 (519)
Q Consensus 153 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~ 230 (519)
... +.... ...+ .+...++|+.++.|+.+ ..+||..+.+-...+..... ... +.
T Consensus 174 ---~~~-~~~h~----------------~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~-~v- 229 (420)
T 3vl1_A 174 ---PRT-LIGHR----------------ATVT-DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN-PHD-GV- 229 (420)
T ss_dssp ---CEE-EECCS----------------SCEE-EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTB-TTC-CE-
T ss_pred ---ceE-EcCCC----------------CcEE-EEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCC-CCC-Cc-
Confidence 111 11000 0000 12334689888887753 67899988875543321110 000 00
Q ss_pred CcEEecccc--------cc--cCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEeccCCcce
Q 042303 231 GMSVLLPIK--------LH--AGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRR 300 (519)
Q Consensus 231 g~av~l~l~--------~~--~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R 300 (519)
....+.+-. .. ..-.-..+++.+++|+.+ ..+..+|+.......+. ......
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----------------g~i~i~d~~~~~~~~~~-~~~~~~ 291 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS-----------------GVITVHNVFSKEQTIQL-PSKFTC 291 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT-----------------SCEEEEETTTCCEEEEE-CCTTSS
T ss_pred cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC-----------------CeEEEEECCCCceeEEc-ccccCC
Confidence 000000000 00 000011267888888764 13556776521111111 111111
Q ss_pred eeceeEEecCCc-EEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCC
Q 042303 301 VMGDMTILPTGD-VLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 301 ~~~~~vvLpdG~-V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
.-.+....|+|+ ++++|+.+ | .+.+||..+..-. ...+.. .....-.++..+||+.+++|+.
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~d-g------------~i~vwd~~~~~~~-~~~~~~---~~~~~v~~~~~~~~~~l~s~~~ 354 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYEN-G------------MLAQWDLRSPECP-VGEFLI---NEGTPINNVYFAAGALFVSSGF 354 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETT-S------------EEEEEETTCTTSC-SEEEEE---STTSCEEEEEEETTEEEEEETT
T ss_pred CceeEEEeCCCCCEEEEEeCC-C------------eEEEEEcCCCcCc-hhhhhc---cCCCCceEEEeCCCCEEEEecC
Confidence 122334578998 88888754 1 4689998876110 111111 0111122345679999999875
Q ss_pred C
Q 042303 380 T 380 (519)
Q Consensus 380 ~ 380 (519)
.
T Consensus 355 d 355 (420)
T 3vl1_A 355 D 355 (420)
T ss_dssp T
T ss_pred C
Confidence 3
No 35
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.13 E-value=0.064 Score=52.12 Aligned_cols=88 Identities=14% Similarity=0.168 Sum_probs=52.8
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~d 127 (519)
...+||..+++-...-..+........+.++++++++|+.+ ..+++||.. +.+-. .. +. ....-.+++.-++
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~-~~~~~--~~-~~~h~~~v~~~~~~~~ 108 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN-TGEKV--VD-FEAHPDYIRSIAVHPT 108 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT-TCCEE--EE-EECCSSCEEEEEECSS
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECC-CCcEE--EE-EeCCCCcEEEEEEcCC
Confidence 45689988875432211222223334567899999998854 578999976 43321 11 22 1222335566678
Q ss_pred CcEEEEcCCCCCceEEe
Q 042303 128 GGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y 144 (519)
++.++.|+.+ .++.+|
T Consensus 109 ~~~l~sgs~D-~~v~lW 124 (304)
T 2ynn_A 109 KPYVLSGSDD-LTVKLW 124 (304)
T ss_dssp SSEEEEEETT-SCEEEE
T ss_pred CCEEEEECCC-CeEEEE
Confidence 9999988876 456666
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.08 E-value=0.12 Score=51.42 Aligned_cols=241 Identities=16% Similarity=0.173 Sum_probs=118.2
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeE-EEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCC
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHL-VGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDG 128 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l-lv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG 128 (519)
..+||..+++....-.... ......+.+||+. ++.|+. ...++++|.. +.+.... +.....-.+++.-+||
T Consensus 14 v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~---d~~i~v~d~~-~~~~~~~---~~~~~~v~~~~~spdg 85 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAH---SNDVSIIDTA-TNNVIAT---VPAGSSPQGVAVSPDG 85 (391)
T ss_dssp EEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGG---GTEEEEEETT-TTEEEEE---EECSSSEEEEEECTTS
T ss_pred EEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCC---CCeEEEEECC-CCeEEEE---EECCCCccceEECCCC
Confidence 4577777766543221111 1222345678864 466543 2578999987 5543321 2222333345566788
Q ss_pred cEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccce-EEEeeCCc-EEEEeCC--ce
Q 042303 129 GFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPF-VNLVTDGN-LFIFSNN--RS 203 (519)
Q Consensus 129 ~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~-~~~~~~G~-Ifv~Gg~--~~ 203 (519)
+.++++|.....+.+| ..+++. ...+.. . . .+. +...++|+ ||+.+.. ..
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~~~------~~~~~~--~---------------~--~~~~~~~s~dg~~l~~~~~~~~~v 140 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSNTV------AGTVKT--G---------------K--SPLGLALSPDGKKLYVTNNGDKTV 140 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEE------EEEEEC--S---------------S--SEEEEEECTTSSEEEEEETTTTEE
T ss_pred CEEEEEECCCCEEEEEECCCCeE------EEEEeC--C---------------C--CcceEEECCCCCEEEEEeCCCCEE
Confidence 8665555554567777 554321 111100 0 0 011 23346787 5566653 46
Q ss_pred EEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCC-eEEEEcCCCCCcccccccccccccCCCceEEE
Q 042303 204 ILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHS-DILVCGGAAWDAFYYAEDKKQFWPALQDCGRI 282 (519)
Q Consensus 204 ~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~g-kI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~ 282 (519)
.+||..+++....+.. ... + ..+.+ . .++ .|++.++.+ ..+..+
T Consensus 141 ~~~d~~~~~~~~~~~~---~~~--~---~~~~~--~--------~dg~~l~~~~~~~-----------------~~v~~~ 185 (391)
T 1l0q_A 141 SVINTVTKAVINTVSV---GRS--P---KGIAV--T--------PDGTKVYVANFDS-----------------MSISVI 185 (391)
T ss_dssp EEEETTTTEEEEEEEC---CSS--E---EEEEE--C--------TTSSEEEEEETTT-----------------TEEEEE
T ss_pred EEEECCCCcEEEEEec---CCC--c---ceEEE--C--------CCCCEEEEEeCCC-----------------CEEEEE
Confidence 7899998876543321 111 1 11211 1 144 455665543 235567
Q ss_pred EecCCCCceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceee-ecCCCCcCCc
Q 042303 283 RITEPNPVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQ-ELAPTTIPRM 360 (519)
Q Consensus 283 d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~ 360 (519)
|+. +.+.... .... .. ......|||+.+++++.... -..+.+||..+. +-. .+.. ...
T Consensus 186 d~~--~~~~~~~~~~~~-~~-~~~~~~~~g~~l~~~~~~~~----------~~~v~~~d~~~~---~~~~~~~~---~~~ 245 (391)
T 1l0q_A 186 DTV--TNSVIDTVKVEA-AP-SGIAVNPEGTKAYVTNVDKY----------FNTVSMIDTGTN---KITARIPV---GPD 245 (391)
T ss_dssp ETT--TTEEEEEEECSS-EE-EEEEECTTSSEEEEEEECSS----------CCEEEEEETTTT---EEEEEEEC---CSS
T ss_pred ECC--CCeEEEEEecCC-Cc-cceEECCCCCEEEEEecCcC----------CCcEEEEECCCC---eEEEEEec---CCC
Confidence 765 2222222 2211 11 23345689987777664210 115789999876 432 2211 111
Q ss_pred cceeeeEcCCCc-EEEecCC
Q 042303 361 YHSVSVLLPDGK-VLIAGSN 379 (519)
Q Consensus 361 yhs~a~LlpdG~-V~v~GG~ 379 (519)
.....+-|||+ ||++++.
T Consensus 246 -~~~~~~s~dg~~l~~s~~~ 264 (391)
T 1l0q_A 246 -PAGIAVTPDGKKVYVALSF 264 (391)
T ss_dssp -EEEEEECTTSSEEEEEETT
T ss_pred -ccEEEEccCCCEEEEEcCC
Confidence 12234568997 5566654
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.08 E-value=0.16 Score=50.95 Aligned_cols=88 Identities=5% Similarity=-0.059 Sum_probs=52.3
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~d 127 (519)
...+||..+++-...-..+..........+||+++++|+.+ ..+++||.. +.+- .. .+. ....-.+++..+|
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~-~~~~--~~-~~~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVK-DGSN--PR-TLIGHRATVTDIAIIDR 192 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCC--CE-EEECCSSCEEEEEEETT
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCcC--ce-EEcCCCCcEEEEEEcCC
Confidence 45688988776554322233333334556789999998754 578999976 3321 11 122 1222334556679
Q ss_pred CcEEEEcCCCCCceEEe
Q 042303 128 GGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y 144 (519)
|+.++.|+.++ .+.+|
T Consensus 193 ~~~l~s~~~d~-~v~iw 208 (420)
T 3vl1_A 193 GRNVLSASLDG-TIRLW 208 (420)
T ss_dssp TTEEEEEETTS-CEEEE
T ss_pred CCEEEEEcCCC-cEEEe
Confidence 99999888764 45555
No 38
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.03 E-value=0.11 Score=51.72 Aligned_cols=229 Identities=15% Similarity=0.173 Sum_probs=117.5
Q ss_pred eccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEeC-CCCCCCCcc
Q 042303 76 LTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIP-PQGQSNKQS 154 (519)
Q Consensus 76 ~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~yP-~~~~w~~~~ 154 (519)
+.+||+.+++|+.+ ..++++|.. +......-. + ...+-.+++.-++|+.++.||.++ .+.+|+ ....-....
T Consensus 72 ~s~d~~~l~s~s~D---g~v~vWd~~-~~~~~~~~~-~-~~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~~~~~~ 144 (354)
T 2pbi_B 72 WCKDKRRIVSSSQD---GKVIVWDSF-TTNKEHAVT-M-PCTWVMACAYAPSGCAIACGGLDN-KCSVYPLTFDKNENMA 144 (354)
T ss_dssp ECTTSSEEEEEETT---SEEEEEETT-TCCEEEEEE-C-SSSCCCEEEECTTSSEEEEESTTS-EEEEEECCCCTTCCSG
T ss_pred ECCCCCEEEEEeCC---CeEEEEECC-CCCcceEEe-c-CCCCEEEEEECCCCCEEEEeeCCC-CEEEEEEecccccccc
Confidence 45689999999864 578899976 433322111 2 123445666778999999999874 456662 221100000
Q ss_pred cccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCCCc
Q 042303 155 IYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPASGM 232 (519)
Q Consensus 155 ~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~ 232 (519)
.....+. ++ ....+ .+...++++.++.|+.+ ..+||..+++..+.+. + .. ..
T Consensus 145 ~~~~~~~-------~h---------~~~v~-~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~---~-h~-----~~ 198 (354)
T 2pbi_B 145 AKKKSVA-------MH---------TNYLS-ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH---G-HG-----AD 198 (354)
T ss_dssp GGCEEEE-------EC---------SSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---C-CS-----SC
T ss_pred ccceeee-------cc---------CCcEE-EEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc---C-CC-----CC
Confidence 0000000 00 00001 12234577766666543 5689998887544331 1 10 11
Q ss_pred EEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEecCC
Q 042303 233 SVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPTG 311 (519)
Q Consensus 233 av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG 311 (519)
...+.+.+ ..+++.+++|+.+. .+..+|+. +.+.... ........ +....|+|
T Consensus 199 v~~~~~~~------~~~g~~l~sgs~Dg-----------------~v~~wd~~--~~~~~~~~~~h~~~v~-~v~~~p~~ 252 (354)
T 2pbi_B 199 VLCLDLAP------SETGNTFVSGGCDK-----------------KAMVWDMR--SGQCVQAFETHESDVN-SVRYYPSG 252 (354)
T ss_dssp EEEEEECC------CSSCCEEEEEETTS-----------------CEEEEETT--TCCEEEEECCCSSCEE-EEEECTTS
T ss_pred eEEEEEEe------CCCCCEEEEEeCCC-----------------eEEEEECC--CCcEEEEecCCCCCeE-EEEEeCCC
Confidence 11111111 12567888887651 34566665 2222222 21122222 22356899
Q ss_pred cEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceee-ecCCCCcCCccceeeeEcCCCcEEEecCCC
Q 042303 312 DVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQ-ELAPTTIPRMYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 312 ~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 380 (519)
+.++.|+.+. ++.+||..++ +-. ....... .........-|||+++++|+..
T Consensus 253 ~~l~s~s~D~-------------~v~lwd~~~~---~~~~~~~~~~~-~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 253 DAFASGSDDA-------------TCRLYDLRAD---REVAIYSKESI-IFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp SEEEEEETTS-------------CEEEEETTTT---EEEEEECCTTC-CSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEeCCC-------------eEEEEECCCC---cEEEEEcCCCc-ccceeEEEEeCCCCEEEEEECC
Confidence 9999988641 4689998876 322 2211111 1112334456899999999864
No 39
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.03 E-value=0.23 Score=46.97 Aligned_cols=239 Identities=14% Similarity=0.104 Sum_probs=114.9
Q ss_pred EEEEECCCCcEEECccC-CCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCC
Q 042303 50 SVLFDIETAKLKPLKIQ-TDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPD 127 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~d 127 (519)
...||+. ++++..... ......+.++..+|++++.... ...+..||+. .++.... ++ ....-.+.+.-++
T Consensus 38 v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~--g~~~~~~--~~~~~~~~~~i~~~~~ 109 (299)
T 2z2n_A 38 ISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITKK--GIIKEYT--LPNPDSAPYGITEGPN 109 (299)
T ss_dssp EEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--SCEEEEE--CSSTTCCEEEEEECTT
T ss_pred EEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECCC--CcEEEEe--CCCcCCCceeeEECCC
Confidence 3467777 666554322 1112222334478999987542 2468889875 2333321 21 1122234555568
Q ss_pred CcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEE-EeeCCcEEEEeC--Cce
Q 042303 128 GGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVN-LVTDGNLFIFSN--NRS 203 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~-~~~~G~Ifv~Gg--~~~ 203 (519)
|++|+..... ..+..| + +++.. ..... .. ...|... ..++|+||+... ...
T Consensus 110 g~l~v~~~~~-~~i~~~d~-~g~~~----~~~~~-~~------------------~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 110 GDIWFTEMNG-NRIGRITD-DGKIR----EYELP-NK------------------GSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCEEEEETTT-TEEEEECT-TCCEE----EEECS-ST------------------TCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCEEEEecCC-ceEEEECC-CCCEE----EecCC-CC------------------CCCCceEEEcCCCCEEEEeCCCCEE
Confidence 9999975432 345556 5 33211 11000 00 0012233 335899998763 356
Q ss_pred EEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEE
Q 042303 204 ILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIR 283 (519)
Q Consensus 204 ~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d 283 (519)
.+||+ +++... +. ++.. ...| ..+.+ ..+++||+..... ..+.+||
T Consensus 165 ~~~~~-~g~~~~-~~-~~~~-~~~~---~~i~~----------~~~g~l~v~~~~~-----------------~~i~~~~ 210 (299)
T 2z2n_A 165 GRITE-SGDITE-FK-IPTP-ASGP---VGITK----------GNDDALWFVEIIG-----------------NKIGRIT 210 (299)
T ss_dssp EEECT-TCCEEE-EE-CSST-TCCE---EEEEE----------CTTSSEEEEETTT-----------------TEEEEEC
T ss_pred EEEcC-CCcEEE-ee-CCCC-CCcc---eeEEE----------CCCCCEEEEccCC-----------------ceEEEEC
Confidence 78999 666542 31 1211 1111 12221 1267888875322 1244565
Q ss_pred ecCCCCceEeccCC--cceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCcc
Q 042303 284 ITEPNPVWKKEMMP--TRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMY 361 (519)
Q Consensus 284 ~~~~~~~W~~~~M~--~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~y 361 (519)
+. .++....++ ..+. .+.+.-++|+||+..... ..+.+||| +. ++...........-
T Consensus 211 ~~---g~~~~~~~~~~~~~~-~~i~~~~~g~l~v~~~~~-------------~~i~~~d~-~g---~~~~~~~~~~~~~~ 269 (299)
T 2z2n_A 211 TS---GEITEFKIPTPNARP-HAITAGAGIDLWFTEWGA-------------NKIGRLTS-NN---IIEEYPIQIKSAEP 269 (299)
T ss_dssp TT---CCEEEEECSSTTCCE-EEEEECSTTCEEEEETTT-------------TEEEEEET-TT---EEEEEECSSSSCCE
T ss_pred CC---CcEEEEECCCCCCCc-eeEEECCCCCEEEeccCC-------------ceEEEECC-CC---ceEEEeCCCCCCcc
Confidence 52 233322222 1111 133445789999875221 13578998 45 44443211111112
Q ss_pred ceeeeEcCCCcEEEecC
Q 042303 362 HSVSVLLPDGKVLIAGS 378 (519)
Q Consensus 362 hs~a~LlpdG~V~v~GG 378 (519)
++.++ ++|++|++..
T Consensus 270 ~~i~~--~~g~l~v~~~ 284 (299)
T 2z2n_A 270 HGICF--DGETIWFAME 284 (299)
T ss_dssp EEEEE--CSSCEEEEET
T ss_pred ceEEe--cCCCEEEEec
Confidence 33443 8999999864
No 40
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.01 E-value=0.24 Score=48.84 Aligned_cols=224 Identities=15% Similarity=0.234 Sum_probs=113.9
Q ss_pred eccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCc
Q 042303 76 LTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQ 153 (519)
Q Consensus 76 ~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~ 153 (519)
..+||+++++|+.+ ..++++|.. +.+-... +. ...+-.+++.-++|+.++.||.+ ..+.+| ..+..-.
T Consensus 63 ~s~d~~~l~s~s~D---g~v~iWd~~-~~~~~~~---~~~~~~~v~~~~~s~~~~~l~s~~~d-~~v~iw~~~~~~~~-- 132 (340)
T 1got_B 63 WGTDSRLLLSASQD---GKLIIWDSY-TTNKVHA---IPLRSSWVMTCAYAPSGNYVACGGLD-NICSIYNLKTREGN-- 132 (340)
T ss_dssp ECTTSSEEEEEETT---TEEEEEETT-TCCEEEE---EECSSSCEEEEEECTTSSEEEEEETT-CEEEEEETTTCSBS--
T ss_pred ECCCCCEEEEEeCC---CcEEEEECC-CCCcceE---eecCCccEEEEEECCCCCEEEEEeCC-CeEEEEECccCCCc--
Confidence 45689999998854 578999976 4332211 11 12233455566799999999876 456677 4332110
Q ss_pred ccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-ceEEeeCCCCeEEEEccCCCCCCCccCCCCc
Q 042303 154 SIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-RSILFDPKANRVIREYPVLTGGSRNYPASGM 232 (519)
Q Consensus 154 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~ 232 (519)
......+. ++. .... .+...++++|+..+.. ...+||..+++....+ .+ .. +.
T Consensus 133 ~~~~~~~~-------~h~---------~~v~-~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~-h~-----~~ 186 (340)
T 1got_B 133 VRVSRELA-------GHT---------GYLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF---TG-HT-----GD 186 (340)
T ss_dssp CEEEEEEE-------CCS---------SCEE-EEEEEETTEEEEEETTSCEEEEETTTTEEEEEE---CC-CS-----SC
T ss_pred ceeEEEec-------CCC---------ccEE-EEEECCCCcEEEEECCCcEEEEECCCCcEEEEE---cC-CC-----Cc
Confidence 00000010 000 0000 1122356775544433 4678999988754333 21 11 11
Q ss_pred EEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEecCC
Q 042303 233 SVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPTG 311 (519)
Q Consensus 233 av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG 311 (519)
..-+.. ..++++++.|+.+. .+..+|+.. ..-... .-...... +....|||
T Consensus 187 v~~~~~--------~~~~~~l~sg~~d~-----------------~v~~wd~~~--~~~~~~~~~h~~~v~-~v~~~p~~ 238 (340)
T 1got_B 187 VMSLSL--------APDTRLFVSGACDA-----------------SAKLWDVRE--GMCRQTFTGHESDIN-AICFFPNG 238 (340)
T ss_dssp EEEEEE--------CTTSSEEEEEETTS-----------------CEEEEETTT--CSEEEEECCCSSCEE-EEEECTTS
T ss_pred eEEEEE--------CCCCCEEEEEeCCC-----------------cEEEEECCC--CeeEEEEcCCcCCEE-EEEEcCCC
Confidence 111111 12678888887651 344566542 211111 11111222 22456899
Q ss_pred cEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceee-ecCCCCcCCccceeeeEcCCCcEEEecCCC
Q 042303 312 DVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQ-ELAPTTIPRMYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 312 ~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 380 (519)
+.+++|+.+ + ++.+||..+. +-. ........ ..-.....-|||+.+++|+..
T Consensus 239 ~~l~s~s~d-~------------~v~iwd~~~~---~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 239 NAFATGSDD-A------------TCRLFDLRAD---QELMTYSHDNII-CGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp SEEEEEETT-S------------CEEEEETTTT---EEEEEECCTTCC-SCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEcCC-C------------cEEEEECCCC---cEEEEEccCCcc-cceEEEEECCCCCEEEEECCC
Confidence 999998864 1 4689998876 321 11111110 111223456999999999864
No 41
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.96 E-value=0.24 Score=47.77 Aligned_cols=223 Identities=12% Similarity=0.177 Sum_probs=115.7
Q ss_pred eccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCc
Q 042303 76 LTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQ 153 (519)
Q Consensus 76 ~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~ 153 (519)
+.+||+.+++|+.+ ..++++|.. +.+.... +. ....-.+++..+||+.++.|+.+ ..+.+| ..+++
T Consensus 31 ~s~~~~~l~s~~~d---g~i~iw~~~-~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d-~~i~vwd~~~~~---- 98 (312)
T 4ery_A 31 FSPNGEWLASSSAD---KLIKIWGAY-DGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDD-KTLKIWDVSSGK---- 98 (312)
T ss_dssp ECTTSSEEEEEETT---SCEEEEETT-TCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTCC----
T ss_pred ECCCCCEEEEeeCC---CeEEEEeCC-Ccccchh---hccCCCceEEEEEcCCCCEEEEECCC-CEEEEEECCCCc----
Confidence 45688888888754 468888876 4444321 21 11222345556799999999876 356677 44331
Q ss_pred ccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCCC
Q 042303 154 SIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPASG 231 (519)
Q Consensus 154 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g 231 (519)
....+.... .... .+...+++++++.|+.+ ..+||..+++..+.+..- . .+ -
T Consensus 99 --~~~~~~~~~----------------~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----~-~~--v 152 (312)
T 4ery_A 99 --CLKTLKGHS----------------NYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH----S-DP--V 152 (312)
T ss_dssp --EEEEEECCS----------------SCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC----S-SC--E
T ss_pred --EEEEEcCCC----------------CCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC----C-Cc--E
Confidence 111111000 0000 12234688888888754 678999887754433211 1 00 0
Q ss_pred cEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceeeceeEEecC
Q 042303 232 MSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDMTILPT 310 (519)
Q Consensus 232 ~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpd 310 (519)
.++.+ ..+++++++|+.+ ..+..+|+.. .+.... .............-|+
T Consensus 153 ~~~~~----------~~~~~~l~~~~~d-----------------~~i~~wd~~~--~~~~~~~~~~~~~~~~~~~~~~~ 203 (312)
T 4ery_A 153 SAVHF----------NRDGSLIVSSSYD-----------------GLCRIWDTAS--GQCLKTLIDDDNPPVSFVKFSPN 203 (312)
T ss_dssp EEEEE----------CTTSSEEEEEETT-----------------SCEEEEETTT--CCEEEEECCSSCCCEEEEEECTT
T ss_pred EEEEE----------cCCCCEEEEEeCC-----------------CcEEEEECCC--CceeeEEeccCCCceEEEEECCC
Confidence 11111 1267888888765 1344566542 222111 1111111112245689
Q ss_pred CcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceee-ecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 311 GDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQ-ELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 311 G~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
|+.+++|+.+ + .+.+||..+. +-. .+................++++.+++|+..+
T Consensus 204 ~~~l~~~~~d-~------------~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 259 (312)
T 4ery_A 204 GKYILAATLD-N------------TLKLWDYSKG---KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259 (312)
T ss_dssp SSEEEEEETT-T------------EEEEEETTTT---EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS
T ss_pred CCEEEEEcCC-C------------eEEEEECCCC---cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC
Confidence 9999988753 1 4689998776 321 2221111111112233357899999988654
No 42
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.95 E-value=0.26 Score=47.68 Aligned_cols=92 Identities=14% Similarity=0.045 Sum_probs=50.8
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCe-EEEecCCCCCCceEEEEeCCCCCcc-ccCCCCCCCccccce-EEEc
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGH-LVGTGGYQGGANTVRYLWTCDTCDW-IEYPTALAEPRWYST-QVTL 125 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-llv~GG~~~g~~~v~~ydp~~~~~W-~~~~~~m~~~R~y~s-~~~L 125 (519)
...+||+++++....-....... ..++.+||+ +++++.. ...+.+||+. +.+. ... +........ .+.-
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---~~~i~~~d~~-~~~~~~~~---~~~~~~~~~~~~~s 92 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---CQTLVQIETQ-LEPPKVVA---IQEGQSSMADVDIT 92 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---TCEEEEEECS-SSSCEEEE---EEECSSCCCCEEEC
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---CCeEEEEECC-CCceeEEe---cccCCCCccceEEC
Confidence 45689999998865433222222 445667887 5555442 3488999987 5543 111 111111122 4556
Q ss_pred CCCcEEEEcCCCCC--ceEEe-CCCC
Q 042303 126 PDGGFIVVGGRGAF--SYEYI-PPQG 148 (519)
Q Consensus 126 ~dG~V~viGG~~~~--~~E~y-P~~~ 148 (519)
+||+.++++...+. .+.+| ..++
T Consensus 93 ~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 93 PDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp TTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred CCCCEEEEecCCCCcccEEEEECCCC
Confidence 78886665544333 67777 5443
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.94 E-value=0.083 Score=53.46 Aligned_cols=112 Identities=16% Similarity=0.179 Sum_probs=63.4
Q ss_pred CeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCC
Q 042303 74 GGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSN 151 (519)
Q Consensus 74 ~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~ 151 (519)
..+.+||+.+++|+.+ ..+++||.. +.+-... +. ....-.+++..++|+.++.|+.+ .++.+| ..+++.
T Consensus 129 v~~s~dg~~l~s~~~d---~~i~iwd~~-~~~~~~~---~~~h~~~v~~~~~~p~~~~l~s~s~d-~~v~iwd~~~~~~- 199 (393)
T 1erj_A 129 VCFSPDGKFLATGAED---RLIRIWDIE-NRKIVMI---LQGHEQDIYSLDYFPSGDKLVSGSGD-RTVRIWDLRTGQC- 199 (393)
T ss_dssp EEECTTSSEEEEEETT---SCEEEEETT-TTEEEEE---ECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTTEE-
T ss_pred EEECCCCCEEEEEcCC---CeEEEEECC-CCcEEEE---EccCCCCEEEEEEcCCCCEEEEecCC-CcEEEEECCCCee-
Confidence 3456799999998854 578899976 4432211 22 12222345556789999888876 456677 443311
Q ss_pred CcccccccchhccccccCCcccccccccccCccceEEEee-CCcEEEEeCCc--eEEeeCCCCeEEEEc
Q 042303 152 KQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVT-DGNLFIFSNNR--SILFDPKANRVIREY 217 (519)
Q Consensus 152 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~-~G~Ifv~Gg~~--~~~yDp~t~~w~~~~ 217 (519)
.. .+.. . .... .+...+ +|++++.|+.+ ..+||..+.+....+
T Consensus 200 ----~~-~~~~-~----------------~~v~-~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 200 ----SL-TLSI-E----------------DGVT-TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 245 (393)
T ss_dssp ----EE-EEEC-S----------------SCEE-EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred ----EE-EEEc-C----------------CCcE-EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEee
Confidence 00 0000 0 0000 122334 88998888754 678999887654333
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.91 E-value=0.12 Score=52.30 Aligned_cols=252 Identities=12% Similarity=0.129 Sum_probs=126.4
Q ss_pred eEEEEECCCCcEEECccC-CCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQ-TDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~d 127 (519)
...+||..+++....... +..........+||+++++|+.+ ..+.+||.. +.+... .+......-..... +
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~-~~~~~~---~~~~~~~~v~~~~~-~ 185 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVE-SQTKLR---TMAGHQARVGCLSW-N 185 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT-TCCEEE---EECCCSSCEEEEEE-E
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECc-CCeEEE---EecCCCCceEEEEE-C
Confidence 355788888877654333 22222233456689999998753 468899976 443221 12222222233444 7
Q ss_pred CcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC--ceE
Q 042303 128 GGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN--RSI 204 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~--~~~ 204 (519)
++.++.|+.++ .+.+| .....- ....+ .... .... .+...++|++++.|+. ...
T Consensus 186 ~~~l~~~~~dg-~i~i~d~~~~~~----~~~~~-~~~~----------------~~v~-~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 186 RHVLSSGSRSG-AIHHHDVRIANH----QIGTL-QGHS----------------SEVC-GLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp TTEEEEEETTS-EEEEEETTSSSC----EEEEE-ECCS----------------SCEE-EEEECTTSSEEEEEETTSCEE
T ss_pred CCEEEEEcCCC-CEEEEecccCcc----eeeEE-cCCC----------------CCee-EEEEcCCCCEEEEEeCCCeEE
Confidence 88888888763 55666 432210 11111 0000 0000 1223468999888875 467
Q ss_pred EeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEe
Q 042303 205 LFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRI 284 (519)
Q Consensus 205 ~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~ 284 (519)
+||..+.+-...+.... .+... ....| ....++++||...+ ..+..+|+
T Consensus 243 iwd~~~~~~~~~~~~~~-----~~v~~-~~~~p----------~~~~ll~~~~gs~d---------------~~i~i~d~ 291 (401)
T 4aez_A 243 IWDARSSIPKFTKTNHN-----AAVKA-VAWCP----------WQSNLLATGGGTMD---------------KQIHFWNA 291 (401)
T ss_dssp EEETTCSSEEEEECCCS-----SCCCE-EEECT----------TSTTEEEEECCTTT---------------CEEEEEET
T ss_pred EccCCCCCccEEecCCc-----ceEEE-EEECC----------CCCCEEEEecCCCC---------------CEEEEEEC
Confidence 89998876443332111 00111 11211 14567887752111 23456665
Q ss_pred cCCCCceEeccCCcceeeceeEEecCCcEEEEc-CcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccce
Q 042303 285 TEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVN-GAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHS 363 (519)
Q Consensus 285 ~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viG-G~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs 363 (519)
.. .+-.. .+.....-.+....++|+.+++. |...| .+.+||..+. +......+......-.
T Consensus 292 ~~--~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~g~~dg------------~i~v~~~~~~---~~~~~~~~~~h~~~v~ 353 (401)
T 4aez_A 292 AT--GARVN-TVDAGSQVTSLIWSPHSKEIMSTHGFPDN------------NLSIWSYSSS---GLTKQVDIPAHDTRVL 353 (401)
T ss_dssp TT--CCEEE-EEECSSCEEEEEECSSSSEEEEEECTTTC------------EEEEEEEETT---EEEEEEEEECCSSCCC
T ss_pred CC--CCEEE-EEeCCCcEEEEEECCCCCeEEEEeecCCC------------cEEEEecCCc---cceeEEEecCCCCCEE
Confidence 42 22111 11111112233456899888873 32211 5689998876 5544322211111112
Q ss_pred eeeEcCCCcEEEecCCC
Q 042303 364 VSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 364 ~a~LlpdG~V~v~GG~~ 380 (519)
...+-|||+.+++|+..
T Consensus 354 ~~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 354 YSALSPDGRILSTAASD 370 (401)
T ss_dssp EEEECTTSSEEEEECTT
T ss_pred EEEECCCCCEEEEEeCC
Confidence 23457899999998864
No 45
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.87 E-value=0.36 Score=48.36 Aligned_cols=50 Identities=12% Similarity=0.220 Sum_probs=32.4
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTC 101 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~ 101 (519)
...+||..+.+-...-..+...-....+.+||+.+++||.+ ..+.+||..
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~ 138 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLS 138 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECC
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECC
Confidence 45689988876543222233333345677899999999865 456778764
No 46
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.87 E-value=0.011 Score=59.05 Aligned_cols=68 Identities=12% Similarity=0.010 Sum_probs=41.9
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCcc-ccceEEEcCCCcEEEEcCCCCCceEEe-CCCC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPR-WYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQG 148 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R-~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~ 148 (519)
.+.+||+++++|+.+ ..+++||.. +..|..... +.... .-.+++..+||+.++.|+.++ ++.+| ..++
T Consensus 18 ~~s~~g~~l~~~~~d---~~i~iw~~~-~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~d~-~v~vwd~~~~ 87 (377)
T 3dwl_C 18 AFNSQRTEFVTTTAT---NQVELYEQD-GNGWKHART-FSDHDKIVTCVDWAPKSNRIVTCSQDR-NAYVYEKRPD 87 (377)
T ss_dssp EECSSSSEEECCCSS---SCBCEEEEE-TTEEEECCC-BCCCSSCEEEEEECTTTCCEEEEETTS-SEEEC-----
T ss_pred EECCCCCEEEEecCC---CEEEEEEcc-CCceEEEEE-EecCCceEEEEEEeCCCCEEEEEeCCC-eEEEEEcCCC
Confidence 455689999998754 467788877 666655543 44322 223455567899999888763 56666 4443
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.83 E-value=0.52 Score=48.09 Aligned_cols=91 Identities=7% Similarity=0.022 Sum_probs=50.5
Q ss_pred eEEEEECCCCcEEECccC--CCcccCCCeecc-CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEc
Q 042303 49 HSVLFDIETAKLKPLKIQ--TDTWCSSGGLTV-DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTL 125 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~-dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L 125 (519)
...+||..+++...+... +........+.+ |+.+|++|+.+ ..++++|.. +.........-...-+..+...-
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~ 218 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME---GTTRLQDFK-GNILRVFASSDTINIWFCSLDVS 218 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS---SCEEEEETT-SCEEEEEECCSSCSCCCCCEEEE
T ss_pred EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC---CEEEEeecc-CCceeEEeccCCCCccEEEEEEC
Confidence 456788877654332221 111111122333 78888888854 468889976 44332222101122334455566
Q ss_pred CCCcEEEEcCCCCCceEEe
Q 042303 126 PDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 126 ~dG~V~viGG~~~~~~E~y 144 (519)
+||+++++|+.++ .+.+|
T Consensus 219 ~~~~~l~~g~~dg-~i~~w 236 (435)
T 4e54_B 219 ASSRMVVTGDNVG-NVILL 236 (435)
T ss_dssp TTTTEEEEECSSS-BEEEE
T ss_pred CCCCEEEEEeCCC-cEeee
Confidence 7999999998764 45666
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.82 E-value=0.26 Score=48.94 Aligned_cols=91 Identities=5% Similarity=-0.000 Sum_probs=53.1
Q ss_pred eEEEEECCCCcEEECccC--CCcccCCCeecc-CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEc
Q 042303 49 HSVLFDIETAKLKPLKIQ--TDTWCSSGGLTV-DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTL 125 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~-dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L 125 (519)
...+||..+.+....-.. +..........+ +++++++|+.+ ..++++|.. +.........-....+-.+++..
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~ 172 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR---GATTLRDFS-GSVIQVFAKTDSWDYWYCCVDVS 172 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT---TEEEEEETT-SCEEEEEECCCCSSCCEEEEEEE
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC---CEEEEEECC-CCceEEEeccCCCCCCeEEEEEC
Confidence 356889888776654322 222222234455 67888888753 578899987 44433322101111233455666
Q ss_pred CCCcEEEEcCCCCCceEEe
Q 042303 126 PDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 126 ~dG~V~viGG~~~~~~E~y 144 (519)
++++.+++|+.+ ..+.+|
T Consensus 173 ~~~~~l~~~~~d-~~i~i~ 190 (383)
T 3ei3_B 173 VSRQMLATGDST-GRLLLL 190 (383)
T ss_dssp TTTTEEEEEETT-SEEEEE
T ss_pred CCCCEEEEECCC-CCEEEE
Confidence 799999998876 356666
No 49
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.79 E-value=0.8 Score=50.87 Aligned_cols=221 Identities=11% Similarity=0.063 Sum_probs=109.6
Q ss_pred cCCeEEEecCCCCCCceEEEEeCCCCCccccCCCC-CCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCccc
Q 042303 78 VDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTA-LAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSI 155 (519)
Q Consensus 78 ~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~-m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~ 155 (519)
.+|+|++ |... ..+.+||+. +.++...... +.... -.+.+.-.+|++++... ..+-+| |.+++|..
T Consensus 416 ~~g~lWi-gt~~---~Gl~~~~~~-~~~~~~~~~~~~~~~~-v~~i~~d~~g~lwigt~---~Gl~~~~~~~~~~~~--- 483 (781)
T 3v9f_A 416 SEGNLWF-GTYL---GNISYYNTR-LKKFQIIELEKNELLD-VRVFYEDKNKKIWIGTH---AGVFVIDLASKKVIH--- 483 (781)
T ss_dssp TTSCEEE-EETT---EEEEEECSS-SCEEEECCSTTTCCCC-EEEEEECTTSEEEEEET---TEEEEEESSSSSCCE---
T ss_pred CCCCEEE-Eecc---CCEEEEcCC-CCcEEEeccCCCCCCe-EEEEEECCCCCEEEEEC---CceEEEeCCCCeEEe---
Confidence 3677776 3221 357889998 7777665421 22222 22334444688887532 235566 77765531
Q ss_pred ccccchhccccccCCcccccccccccCccce-EEEeeCCcEEEEeC-CceEEeeCCCCeEEEEccCCCCCCCccCCCCcE
Q 042303 156 YLPLLRETHDQLAGHFGTENFYRIENNLYPF-VNLVTDGNLFIFSN-NRSILFDPKANRVIREYPVLTGGSRNYPASGMS 233 (519)
Q Consensus 156 ~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~-~~~~~~G~Ifv~Gg-~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~a 233 (519)
....... . ... .+.. ...-.+|+|++... ....+||+.++++.. +..-.+.+.+. -.+
T Consensus 484 -~~~~~~~-~-------------~~~-~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~l~~~~---i~~ 543 (781)
T 3v9f_A 484 -HYDTSNS-Q-------------LLE-NFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRK-FNQYEGFCSNT---INQ 543 (781)
T ss_dssp -EECTTTS-S-------------CSC-SCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEE-ECTTTTCSCSC---EEE
T ss_pred -cccCccc-c-------------ccc-ceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEE-ccCCCCCCCCe---eEE
Confidence 1100000 0 000 0111 22335789987653 457789999998763 43211101010 012
Q ss_pred EecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEe---c-cCCcceeeceeEEec
Q 042303 234 VLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKK---E-MMPTRRVMGDMTILP 309 (519)
Q Consensus 234 v~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~---~-~M~~~R~~~~~vvLp 309 (519)
++. ..+|+|++... . |- +.+||+. +.+++. . .++..... +.+.-.
T Consensus 544 i~~----------d~~g~lWi~T~-~-Gl----------------v~~~d~~--~~~~~~~~~~~gl~~~~i~-~i~~d~ 592 (781)
T 3v9f_A 544 IYR----------SSKGQMWLATG-E-GL----------------VCFPSAR--NFDYQVFQRKEGLPNTHIR-AISEDK 592 (781)
T ss_dssp EEE----------CTTSCEEEEET-T-EE----------------EEESCTT--TCCCEEECGGGTCSCCCCC-EEEECS
T ss_pred EEE----------CCCCCEEEEEC-C-Cc----------------eEEECCC--CCcEEEccccCCCCCceEE-EEEECC
Confidence 211 12677777532 1 11 0233433 233332 1 34433332 334456
Q ss_pred CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecC---CCCcCCccceeeeEcCCCcEEEecCC
Q 042303 310 TGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELA---PTTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 310 dG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~---~~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
+|+|++.+. .| +.+|||++. ++.... .++.......+++..+||+||++|.+
T Consensus 593 ~g~lW~~t~--~G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~ 647 (781)
T 3v9f_A 593 NGNIWASTN--TG-------------ISCYITSKK---CFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSIN 647 (781)
T ss_dssp SSCEEEECS--SC-------------EEEEETTTT---EEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETT
T ss_pred CCCEEEEcC--Cc-------------eEEEECCCC---ceEEecccCCccccccccCceEECCCCEEEEECCC
Confidence 799988642 12 368999988 766543 23333222234556789999998864
No 50
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.77 E-value=0.24 Score=48.87 Aligned_cols=187 Identities=10% Similarity=0.011 Sum_probs=98.6
Q ss_pred CCceEEEEeCCCCCccccCC----CCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccc
Q 042303 91 GANTVRYLWTCDTCDWIEYP----TALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHD 165 (519)
Q Consensus 91 g~~~v~~ydp~~~~~W~~~~----~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~ 165 (519)
...++.+|||. +.++...- +....+..-... ++.++++||+... ...+.++ +.+.+-.. ..+..
T Consensus 15 ~~~~l~~~d~~-t~~~~~~i~~~~n~~~lg~~~~~i-~~~~~~lyv~~~~-~~~v~viD~~t~~~~~---~i~~~----- 83 (328)
T 3dsm_A 15 SNATLSYYDPA-TCEVENEVFYRANGFKLGDVAQSM-VIRDGIGWIVVNN-SHVIFAIDINTFKEVG---RITGF----- 83 (328)
T ss_dssp CCBEEEEEETT-TTEEECSHHHHHHSSCCBSCEEEE-EEETTEEEEEEGG-GTEEEEEETTTCCEEE---EEECC-----
T ss_pred CCceEEEEECC-CCEEhhhhHhhhcCcccCccceEE-EEECCEEEEEEcC-CCEEEEEECcccEEEE---EcCCC-----
Confidence 35689999998 66654311 001122222233 3458899998653 2467777 76543210 11110
Q ss_pred cccCCcccccccccccCccceEEEe-eCCcEEEEe--CCceEEeeCCCCeEEEEccCCCCC--CCccCCCCcEEeccccc
Q 042303 166 QLAGHFGTENFYRIENNLYPFVNLV-TDGNLFIFS--NNRSILFDPKANRVIREYPVLTGG--SRNYPASGMSVLLPIKL 240 (519)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~yp~~~~~-~~G~Ifv~G--g~~~~~yDp~t~~w~~~~p~~p~~--~r~~~~~g~av~l~l~~ 240 (519)
-.|+.++. ++|++|+.. +....++|+.+++..+.++. ... ....| .+.++
T Consensus 84 -----------------~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~-g~~~~~~~~p-~~i~~------ 138 (328)
T 3dsm_A 84 -----------------TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC-PDMDMESGST-EQMVQ------ 138 (328)
T ss_dssp -----------------SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC-TTCCTTTCBC-CCEEE------
T ss_pred -----------------CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc-CCccccCCCc-ceEEE------
Confidence 12344555 899999987 34577899999886544432 110 01122 23232
Q ss_pred ccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cC-CcceeeceeEEecCCcEEEEcC
Q 042303 241 HAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MM-PTRRVMGDMTILPTGDVLLVNG 318 (519)
Q Consensus 241 ~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M-~~~R~~~~~vvLpdG~V~viGG 318 (519)
.++++|+..-.. ...+.+||+. +.+.... +. ..+ ...++-+||++|+..-
T Consensus 139 -------~~~~lyv~~~~~----------------~~~v~viD~~--t~~~~~~i~~g~~p---~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 139 -------YGKYVYVNCWSY----------------QNRILKIDTE--TDKVVDELTIGIQP---TSLVMDKYNKMWTITD 190 (328)
T ss_dssp -------ETTEEEEEECTT----------------CCEEEEEETT--TTEEEEEEECSSCB---CCCEECTTSEEEEEBC
T ss_pred -------ECCEEEEEcCCC----------------CCEEEEEECC--CCeEEEEEEcCCCc---cceEEcCCCCEEEEEC
Confidence 278899875210 1346678876 3443322 22 122 2335568999998864
Q ss_pred cCCCCCCccCCCCCccccEEEeCCCC
Q 042303 319 AQNGTSAWNDAEEPALAPALYKTKEK 344 (519)
Q Consensus 319 ~~~g~~g~~~~~~~~~~~e~YdP~t~ 344 (519)
.......|.. ....+.++|+++.
T Consensus 191 ~~~~~~~~~~---~~~~v~~id~~t~ 213 (328)
T 3dsm_A 191 GGYEGSPYGY---EAPSLYRIDAETF 213 (328)
T ss_dssp CBCTTCSSCB---CCCEEEEEETTTT
T ss_pred CCccCCcccc---CCceEEEEECCCC
Confidence 3211000000 0135789999988
No 51
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.74 E-value=0.24 Score=49.76 Aligned_cols=237 Identities=12% Similarity=0.178 Sum_probs=114.0
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCc
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQ 153 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~ 153 (519)
.+.+||+.+++|+.+ ..++++|.. +.+-...-. . ...+-.+++.-+||+.++.||.+. .+.+| .....-...
T Consensus 73 ~~sp~~~~l~s~s~D---~~v~iWd~~-~~~~~~~~~-~-h~~~v~~~~~s~~g~~las~~~d~-~v~iw~~~~~~~~~~ 145 (380)
T 3iz6_a 73 DWTPEKNWIVSASQD---GRLIVWNAL-TSQKTHAIK-L-HCPWVMECAFAPNGQSVACGGLDS-ACSIFNLSSQADRDG 145 (380)
T ss_dssp EECTTSSCEEEEETT---SEEEEEETT-TTEEEEEEE-C-CCTTCCCCEECTTSSEEEECCSSS-CCEEEECCCCSSCCC
T ss_pred EEcCCCCEEEEEeCC---CeEEEEECC-CCccceEEe-c-CCCCEEEEEECCCCCEEEEeeCCC-cEEEEECCCCccccC
Confidence 345689999998854 578999976 443221111 1 123334556668999999999874 45555 322110000
Q ss_pred ccccccchhccccccCCcccccccccccCccceEEEee-CCcEEEEeCC--ceEEeeCCCCeEEEEccC-CCCCCCccCC
Q 042303 154 SIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVT-DGNLFIFSNN--RSILFDPKANRVIREYPV-LTGGSRNYPA 229 (519)
Q Consensus 154 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~-~G~Ifv~Gg~--~~~~yDp~t~~w~~~~p~-~p~~~r~~~~ 229 (519)
..+.. .+. .||-+ .... +...+ ++..++.|+. ...+||..+++....+.. .+.+.
T Consensus 146 --~~~~~-~~~---~gh~~---------~v~~-~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h----- 204 (380)
T 3iz6_a 146 --NMPVS-RVL---TGHKG---------YASS-CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH----- 204 (380)
T ss_dssp --SSTTC-CBC---CCCSS---------CCCC-CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC-----
T ss_pred --Cccce-eec---cCCCc---------ceEE-EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC-----
Confidence 01110 000 01100 0000 11123 3444555554 366899998875433311 11110
Q ss_pred CCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEeccCCcceeeceeEEec
Q 042303 230 SGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILP 309 (519)
Q Consensus 230 ~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLp 309 (519)
.....-+.. ...++.+++.|+.+ ..+..+|+......-....-...... +....|
T Consensus 205 ~~~v~~~~~-------~~~~~~~l~sgs~D-----------------~~v~~wd~~~~~~~~~~~~~h~~~v~-~v~~~p 259 (380)
T 3iz6_a 205 TADVLSLSI-------NSLNANMFISGSCD-----------------TTVRLWDLRITSRAVRTYHGHEGDIN-SVKFFP 259 (380)
T ss_dssp CSCEEEEEE-------CSSSCCEEEEEETT-----------------SCEEEEETTTTCCCCEEECCCSSCCC-EEEECT
T ss_pred ccCeEEEEe-------ecCCCCEEEEEECC-----------------CeEEEEECCCCCcceEEECCcCCCeE-EEEEec
Confidence 111111111 11267888888765 13456776421111111111111121 234578
Q ss_pred CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCccee-eecCCCCcC----CccceeeeEcCCCcEEEecCCC
Q 042303 310 TGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRF-QELAPTTIP----RMYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 310 dG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-~~~~~~~~~----R~yhs~a~LlpdG~V~v~GG~~ 380 (519)
||+.++.|+.+. ++.+||..++ +- ..+...... ...-.....-|||+.+++|+..
T Consensus 260 ~~~~l~s~s~D~-------------~i~lwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 260 DGQRFGTGSDDG-------------TCRLFDMRTG---HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp TSSEEEEECSSS-------------CEEEEETTTT---EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred CCCeEEEEcCCC-------------eEEEEECCCC---cEEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence 999999988641 4689998876 32 111111100 0011233456899999999764
No 52
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.72 E-value=0.44 Score=46.70 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=76.4
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~d 127 (519)
...+||..+++-...-...........+.+||+.+++|+.. ..+++||.. +.+-.. . +. ....-.+++.-+|
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~-~~~~~~--~-~~~~~~~v~~~~~spd 175 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVE-SGKKEY--S-LDTRGKFILSIAYSPD 175 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETT-TCSEEE--E-EECSSSCEEEEEECTT
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcC-CCceeE--E-ecCCCceEEEEEECCC
Confidence 45589998876433211122222334567899999998854 578889876 332111 1 21 1222345556679
Q ss_pred CcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eE
Q 042303 128 GGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SI 204 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~ 204 (519)
|+.++.|+.++ .+.+| ..+++ ....+.... .... .+...++|++++.|+.+ ..
T Consensus 176 g~~lasg~~dg-~i~iwd~~~~~------~~~~~~~h~----------------~~v~-~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 176 GKYLASGAIDG-IINIFDIATGK------LLHTLEGHA----------------MPIR-SLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp SSEEEEEETTS-CEEEEETTTTE------EEEEECCCS----------------SCCC-EEEECTTSCEEEEECTTSCEE
T ss_pred CCEEEEEcCCC-eEEEEECCCCc------EEEEEcccC----------------Ccee-EEEEcCCCCEEEEEcCCCeEE
Confidence 99999998764 56677 44331 111111000 0000 12334789999988764 67
Q ss_pred EeeCCCCeEEE
Q 042303 205 LFDPKANRVIR 215 (519)
Q Consensus 205 ~yDp~t~~w~~ 215 (519)
+||..+.+...
T Consensus 232 iwd~~~~~~~~ 242 (321)
T 3ow8_A 232 IYDVQHANLAG 242 (321)
T ss_dssp EEETTTCCEEE
T ss_pred EEECCCcceeE
Confidence 89998876543
No 53
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.71 E-value=0.4 Score=44.86 Aligned_cols=226 Identities=15% Similarity=0.124 Sum_probs=110.2
Q ss_pred eeccCCeEEE-ecCCCCCCceEEEEeCCCCCccccCCC-CCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCC
Q 042303 75 GLTVDGHLVG-TGGYQGGANTVRYLWTCDTCDWIEYPT-ALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSN 151 (519)
Q Consensus 75 ~~l~dG~llv-~GG~~~g~~~v~~ydp~~~~~W~~~~~-~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~ 151 (519)
++..+|++++ .... ...+..||+. +........ .+.. -.+.+.-++|++||... ...+..| +.....
T Consensus 30 ~~~~~g~l~v~~~~~---~~~i~~~~~~-~~~~~~~~~~~~~~---p~~i~~~~~g~l~v~~~--~~~i~~~d~~~~~~- 99 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGM---YGRVVKLATG-STGTTVLPFNGLYQ---PQGLAVDGAGTVYVTDF--NNRVVTLAAGSNNQ- 99 (270)
T ss_dssp EECTTCCEEEEECSS---SCEEEEECC------EECCCCSCCS---CCCEEECTTCCEEEEET--TTEEEEECTTCSCC-
T ss_pred EECCCCCEEEEccCC---CCcEEEecCC-CcccceEeeCCcCC---cceeEECCCCCEEEEcC--CCEEEEEeCCCceE-
Confidence 3446899888 5332 3468889886 444332211 1222 23455556899999876 3355566 544321
Q ss_pred CcccccccchhccccccCCcccccccccccCccceEEE-eeCCcEEEEeC--CceEEeeCCCCeEEEEccCCCCCCCccC
Q 042303 152 KQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNL-VTDGNLFIFSN--NRSILFDPKANRVIREYPVLTGGSRNYP 228 (519)
Q Consensus 152 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~-~~~G~Ifv~Gg--~~~~~yDp~t~~w~~~~p~~p~~~r~~~ 228 (519)
..... . ....|.... .++|+||+... ....+||..+..... ... . ....|
T Consensus 100 ---~~~~~--~------------------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-~~~-~--~~~~p 152 (270)
T 1rwi_B 100 ---TVLPF--D------------------GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LPF-T--GLNDP 152 (270)
T ss_dssp ---EECCC--C------------------SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE-CCC-C--SCCSC
T ss_pred ---eeeec--C------------------CcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe-ecc-c--cCCCc
Confidence 11110 0 001233333 35899998753 346678877655331 211 1 11112
Q ss_pred CCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec---cCCcceeecee
Q 042303 229 ASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE---MMPTRRVMGDM 305 (519)
Q Consensus 229 ~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~---~M~~~R~~~~~ 305 (519)
.+.++ ..+++||+..... ..+.+||+. +..-... .+..++ +.
T Consensus 153 -~~i~~------------~~~g~l~v~~~~~-----------------~~i~~~~~~--~~~~~~~~~~~~~~p~---~i 197 (270)
T 1rwi_B 153 -DGVAV------------DNSGNVYVTDTDN-----------------NRVVKLEAE--SNNQVVLPFTDITAPW---GI 197 (270)
T ss_dssp -CCEEE------------CTTCCEEEEEGGG-----------------TEEEEECTT--TCCEEECCCSSCCSEE---EE
T ss_pred -eeEEE------------eCCCCEEEEECCC-----------------CEEEEEecC--CCceEeecccCCCCce---EE
Confidence 12221 1267888875322 234556654 2221111 222222 33
Q ss_pred EEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCCCCCc
Q 042303 306 TILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYK 385 (519)
Q Consensus 306 vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~ 385 (519)
++-++|+||+...... .+.+||+... .-........ ..-.+ ..+-+||+||++....+
T Consensus 198 ~~d~~g~l~v~~~~~~-------------~v~~~~~~~~---~~~~~~~~~~-~~p~~-i~~~~~g~l~v~~~~~~---- 255 (270)
T 1rwi_B 198 AVDEAGTVYVTEHNTN-------------QVVKLLAGST---TSTVLPFTGL-NTPLA-VAVDSDRTVYVADRGND---- 255 (270)
T ss_dssp EECTTCCEEEEETTTS-------------CEEEECTTCS---CCEECCCCSC-SCEEE-EEECTTCCEEEEEGGGT----
T ss_pred EECCCCCEEEEECCCC-------------cEEEEcCCCC---cceeeccCCC-CCcee-EEECCCCCEEEEECCCC----
Confidence 4557899999764321 3678998765 3222211111 11123 33468999999875422
Q ss_pred cCCCCCceeeEEEEcCCC
Q 042303 386 FDHKYPTELRVEKFSPPY 403 (519)
Q Consensus 386 ~~~~~p~~~~vEiy~Ppy 403 (519)
+|.+|..+.
T Consensus 256 ---------~v~~~~~~~ 264 (270)
T 1rwi_B 256 ---------RVVKLTSLE 264 (270)
T ss_dssp ---------EEEEECCCG
T ss_pred ---------EEEEEcCCC
Confidence 577776554
No 54
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.69 E-value=0.16 Score=50.60 Aligned_cols=134 Identities=14% Similarity=0.112 Sum_probs=70.5
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDG 128 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG 128 (519)
...+||+.+++....-.... ......+.+||+.++++|.. ...+.+||.. +.+.... +.....-.+.+..+||
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~--~~~v~v~d~~-~~~~~~~---~~~~~~~~~~~~s~dg 127 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMA--SSTLSVIDTT-SNTVAGT---VKTGKSPLGLALSPDG 127 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETT--TTEEEEEETT-TTEEEEE---EECSSSEEEEEECTTS
T ss_pred eEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECC--CCEEEEEECC-CCeEEEE---EeCCCCcceEEECCCC
Confidence 45679998887654322222 22234456788755544432 2579999987 5543321 2222333455566788
Q ss_pred cEE-EEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccce-EEEeeCCc-EEEEeCC--c
Q 042303 129 GFI-VVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPF-VNLVTDGN-LFIFSNN--R 202 (519)
Q Consensus 129 ~V~-viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~-~~~~~~G~-Ifv~Gg~--~ 202 (519)
+.+ +.++.+ ..+.+| ..+++. ...+.. . ..+. +...++|+ ||+.+.. .
T Consensus 128 ~~l~~~~~~~-~~v~~~d~~~~~~------~~~~~~-~------------------~~~~~~~~~~dg~~l~~~~~~~~~ 181 (391)
T 1l0q_A 128 KKLYVTNNGD-KTVSVINTVTKAV------INTVSV-G------------------RSPKGIAVTPDGTKVYVANFDSMS 181 (391)
T ss_dssp SEEEEEETTT-TEEEEEETTTTEE------EEEEEC-C------------------SSEEEEEECTTSSEEEEEETTTTE
T ss_pred CEEEEEeCCC-CEEEEEECCCCcE------EEEEec-C------------------CCcceEEECCCCCEEEEEeCCCCE
Confidence 744 665443 466677 544321 111100 0 0011 23346775 5566544 3
Q ss_pred eEEeeCCCCeEEE
Q 042303 203 SILFDPKANRVIR 215 (519)
Q Consensus 203 ~~~yDp~t~~w~~ 215 (519)
..+||..+++...
T Consensus 182 v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 182 ISVIDTVTNSVID 194 (391)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCeEEE
Confidence 6789999887654
No 55
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.67 E-value=0.15 Score=51.32 Aligned_cols=232 Identities=12% Similarity=0.119 Sum_probs=113.6
Q ss_pred eecc-CCeEEEecCCCCCCceEEEEeCCCCCcccc-----CCCCCC-CccccceEEEcCCC-cEEEEcCCCCCceEEe-C
Q 042303 75 GLTV-DGHLVGTGGYQGGANTVRYLWTCDTCDWIE-----YPTALA-EPRWYSTQVTLPDG-GFIVVGGRGAFSYEYI-P 145 (519)
Q Consensus 75 ~~l~-dG~llv~GG~~~g~~~v~~ydp~~~~~W~~-----~~~~m~-~~R~y~s~~~L~dG-~V~viGG~~~~~~E~y-P 145 (519)
.+.+ +++++++|+.+ ..+++||.. +..... .. .+. ....-.+++..++| .+++.|+.++ .+.+| .
T Consensus 88 ~~~p~~~~~l~s~s~d---g~v~vw~~~-~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~ 161 (402)
T 2aq5_A 88 AWCPHNDNVIASGSED---CTVMVWEIP-DGGLVLPLREPVI-TLEGHTKRVGIVAWHPTAQNVLLSAGCDN-VILVWDV 161 (402)
T ss_dssp EECTTCTTEEEEEETT---SEEEEEECC-TTCCSSCBCSCSE-EEECCSSCEEEEEECSSBTTEEEEEETTS-CEEEEET
T ss_pred EeCCCCCCEEEEEeCC---CeEEEEEcc-CCCCccccCCceE-EecCCCCeEEEEEECcCCCCEEEEEcCCC-EEEEEEC
Confidence 3445 78899998754 478899976 443321 11 121 12222345556677 6888888763 56676 4
Q ss_pred CCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCC
Q 042303 146 PQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGG 223 (519)
Q Consensus 146 ~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~ 223 (519)
.+++. ...+....+. .... .+...++|+.++.|+.+ ..+||..+.+....+.....+
T Consensus 162 ~~~~~------~~~~~~~~~~--------------~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 162 GTGAA------VLTLGPDVHP--------------DTIY-SVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp TTTEE------EEEECTTTCC--------------SCEE-EEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS
T ss_pred CCCCc------cEEEecCCCC--------------CceE-EEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC
Confidence 43311 1111000000 0000 12234688888888654 668999988755433111111
Q ss_pred CCccCCCCcEEecccccccCCccccCCeEEEEc---CCCCCcccccccccccccCCCceEEEEecCCCCceEeccCCcce
Q 042303 224 SRNYPASGMSVLLPIKLHAGHQKIIHSDILVCG---GAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRR 300 (519)
Q Consensus 224 ~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~G---G~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R 300 (519)
.+ ....+.. .+++++++| +.+ ..+..+|+......-....+....
T Consensus 221 ~~----~~~~~~~-----------~~~~~l~~g~~~~~d-----------------~~i~iwd~~~~~~~~~~~~~~~~~ 268 (402)
T 2aq5_A 221 TR----PVHAVFV-----------SEGKILTTGFSRMSE-----------------RQVALWDTKHLEEPLSLQELDTSS 268 (402)
T ss_dssp SS----CCEEEEC-----------STTEEEEEEECTTCC-----------------EEEEEEETTBCSSCSEEEECCCCS
T ss_pred Cc----ceEEEEc-----------CCCcEEEEeccCCCC-----------------ceEEEEcCccccCCceEEeccCCC
Confidence 10 1112222 278888888 332 234567765311111111222222
Q ss_pred eeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCC
Q 042303 301 VMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 301 ~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
.-.....-|||+.+++.|...| .+.+||..+... ....+....... ........|||++++.+++
T Consensus 269 ~v~~~~~s~~~~~l~~~g~~dg------------~i~i~d~~~~~~-~~~~l~~~~~~~-~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 269 GVLLPFFDPDTNIVYLCGKGDS------------SIRYFEITSEAP-FLHYLSMFSSKE-SQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp SCEEEEEETTTTEEEEEETTCS------------CEEEEEECSSTT-CEEEEEEECCSS-CCSEEEECCGGGSCGGGTE
T ss_pred ceeEEEEcCCCCEEEEEEcCCC------------eEEEEEecCCCc-ceEeecccccCC-cccceEEecccccceecce
Confidence 2223345689988765543222 467899887620 022222211111 1123345789998877654
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.65 E-value=0.041 Score=54.11 Aligned_cols=240 Identities=13% Similarity=0.089 Sum_probs=114.1
Q ss_pred eccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEE-cCC--CcEEEEcCCCCCceEEe-CCCCCCC
Q 042303 76 LTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVT-LPD--GGFIVVGGRGAFSYEYI-PPQGQSN 151 (519)
Q Consensus 76 ~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~-L~d--G~V~viGG~~~~~~E~y-P~~~~w~ 151 (519)
+.+||+.+++|+.+ ..+++||.. ..++..... +......-.... .++ ++.++.|+.++ .+.+| ..+++|.
T Consensus 19 ~s~~~~~l~~~~~d---g~i~iw~~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 19 LDYYGKRLATCSSD---KTIKIFEVE-GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENGRWS 92 (379)
T ss_dssp ECSSSSEEEEEETT---SCEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEEETTEEE
T ss_pred EcCCCCEEEEEECC---CcEEEEecC-CCcceeeeE-ecCCCCcEEEEEeCCCCCCCEEEEeccCC-EEEEEEcCCCcee
Confidence 44688888888753 457788765 344443322 332222222233 244 89999988764 45666 4433221
Q ss_pred CcccccccchhccccccCCcccccccccccCccceEEEeeC--CcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCcc
Q 042303 152 KQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTD--GNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNY 227 (519)
Q Consensus 152 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~--G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~ 227 (519)
....+.... .... .+...++ |++++.|+.+ ..+||..+....... .+.. .. .
T Consensus 93 ----~~~~~~~~~----------------~~v~-~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~-~~-~ 148 (379)
T 3jrp_A 93 ----QIAVHAVHS----------------ASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDA-HA-I 148 (379)
T ss_dssp ----EEEEECCCS----------------SCEE-EEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE-EEEC-CT-T
T ss_pred ----EeeeecCCC----------------cceE-EEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE-EecC-CC-C
Confidence 111100000 0000 1223456 8888888754 567888776311101 0110 00 0
Q ss_pred CCCCcEEeccccccc-----CCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcc-e
Q 042303 228 PASGMSVLLPIKLHA-----GHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTR-R 300 (519)
Q Consensus 228 ~~~g~av~l~l~~~~-----~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~-R 300 (519)
.-.++.+ .|.. ......+++.+++|+.+ ..+..+|+......|... .+... .
T Consensus 149 --~v~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d-----------------g~i~i~d~~~~~~~~~~~~~~~~h~~ 207 (379)
T 3jrp_A 149 --GVNSASW--APATIEEDGEHNGTKESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSD 207 (379)
T ss_dssp --CEEEEEE--CCCC----------CTTCEEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred --ceEEEEE--cCccccccccccCCCCCCEEEEEeCC-----------------CeEEEEEecCCCcceeeEEEEecccC
Confidence 0011111 0000 00000147788888764 235577876444455544 33221 1
Q ss_pred eeceeEEecC---CcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcc-eeeecCCCCcCCccceeeeEcCCCcEEEe
Q 042303 301 VMGDMTILPT---GDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHH-RFQELAPTTIPRMYHSVSVLLPDGKVLIA 376 (519)
Q Consensus 301 ~~~~~vvLpd---G~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~-~W~~~~~~~~~R~yhs~a~LlpdG~V~v~ 376 (519)
.-.+...-|+ ++++++|+.+ | .+.+||..+.... ............. -.....-|||+.+++
T Consensus 208 ~v~~~~~sp~~~~~~~l~s~~~d-g------------~i~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~~ 273 (379)
T 3jrp_A 208 WVRDVAWSPTVLLRSYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDV-LWRASWSLSGNVLAL 273 (379)
T ss_dssp CEEEEEECCCCSSSEEEEEEETT-S------------CEEEEEESSTTSCCEEEESSSSCCSSC-EEEEEECSSSCCEEE
T ss_pred cEeEEEECCCCCCCCeEEEEeCC-C------------EEEEEeCCCCCccceeeeeccccCCCc-EEEEEEcCCCCEEEE
Confidence 1123345688 8999998764 1 4689998775211 1111111111111 122345699999998
Q ss_pred cCCC
Q 042303 377 GSNT 380 (519)
Q Consensus 377 GG~~ 380 (519)
|+..
T Consensus 274 ~~~d 277 (379)
T 3jrp_A 274 SGGD 277 (379)
T ss_dssp EESS
T ss_pred ecCC
Confidence 8764
No 57
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.64 E-value=0.4 Score=47.25 Aligned_cols=94 Identities=17% Similarity=-0.041 Sum_probs=50.0
Q ss_pred eeEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCC-CCCceEEEE--eCCCCCccccCCCCCCCccccceEEE
Q 042303 48 AHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQ-GGANTVRYL--WTCDTCDWIEYPTALAEPRWYSTQVT 124 (519)
Q Consensus 48 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~-~g~~~v~~y--dp~~~~~W~~~~~~m~~~R~y~s~~~ 124 (519)
.+...+|+++++++.+.......-...++-+||+.+.+.... +....+.+| |+. +.+...+.. ....-..+....
T Consensus 29 i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~-~g~~~~~~~-~~~~~~~p~~~~ 106 (361)
T 3scy_A 29 IYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE-KGTLHLLNT-QKTMGADPCYLT 106 (361)
T ss_dssp EEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT-TTEEEEEEE-EECSSSCEEEEE
T ss_pred EEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC-CCcEEEeeE-eccCCCCcEEEE
Confidence 456678999999987765422222234566889855555432 123455555 444 344444332 222222344444
Q ss_pred cCCCcEEEEcCCCCCceEEe
Q 042303 125 LPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 125 L~dG~V~viGG~~~~~~E~y 144 (519)
+ ||+.+++......++.+|
T Consensus 107 ~-dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 107 T-NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp E-CSSEEEEEETTTTEEEEE
T ss_pred E-CCCEEEEEECCCCEEEEE
Confidence 5 777555554444566777
No 58
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.64 E-value=0.48 Score=44.79 Aligned_cols=239 Identities=17% Similarity=0.135 Sum_probs=114.9
Q ss_pred EEEECCCCcEEECccCCC-cccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCCC
Q 042303 51 VLFDIETAKLKPLKIQTD-TWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPDG 128 (519)
Q Consensus 51 ~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~dG 128 (519)
..||+. ++++.+..... ....+.++..+|++++.... ...+..||+. .++.... +. ....-.+.+.-++|
T Consensus 44 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~--g~~~~~~--~~~~~~~~~~i~~~~~g 115 (300)
T 2qc5_A 44 SSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK--GGFTEYP--LPQPDSGPYGITEGLNG 115 (300)
T ss_dssp EEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--SCEEEEE--CSSTTCCEEEEEECSTT
T ss_pred EEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC--CCeEEec--CCCCCCCCccceECCCC
Confidence 456776 66654332211 12222334568999987532 3468889986 3343321 21 11222344555689
Q ss_pred cEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEe-eCCcEEEEe--CCceE
Q 042303 129 GFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLV-TDGNLFIFS--NNRSI 204 (519)
Q Consensus 129 ~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~-~~G~Ifv~G--g~~~~ 204 (519)
++|+..... ..+..| +. ++.. ..... . ....|..... ++|+||+.. +....
T Consensus 116 ~l~v~~~~~-~~i~~~~~~-g~~~----~~~~~-~------------------~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 116 DIWFTQLNG-DRIGKLTAD-GTIY----EYDLP-N------------------KGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp CEEEEETTT-TEEEEECTT-SCEE----EEECS-S------------------TTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CEEEEccCC-CeEEEECCC-CCEE----EccCC-C------------------CCCCceeEEECCCCCEEEEecCCCeEE
Confidence 999876432 345555 54 3211 11110 0 0012333333 689999876 34567
Q ss_pred EeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEe
Q 042303 205 LFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRI 284 (519)
Q Consensus 205 ~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~ 284 (519)
+||+ +++... +. ++. ....| ..+.+ ..+++||++.... ..+.+||+
T Consensus 171 ~~~~-~g~~~~-~~-~~~-~~~~~---~~i~~----------d~~g~l~v~~~~~-----------------~~i~~~~~ 216 (300)
T 2qc5_A 171 RITN-TGKLEE-YP-LPT-NAAAP---VGITS----------GNDGALWFVEIMG-----------------NKIGRITT 216 (300)
T ss_dssp EECT-TCCEEE-EE-CSS-TTCCE---EEEEE----------CTTSSEEEEETTT-----------------TEEEEECT
T ss_pred EECC-CCcEEE-ee-CCC-CCCCc---ceEEE----------CCCCCEEEEccCC-----------------CEEEEEcC
Confidence 8998 555442 32 221 11111 12221 1267888865321 12445654
Q ss_pred cCCCCceEeccCC--cceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccc
Q 042303 285 TEPNPVWKKEMMP--TRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYH 362 (519)
Q Consensus 285 ~~~~~~W~~~~M~--~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yh 362 (519)
. .++....++ ..+. .+.++-++|+||+..-.. ..+.+||+ +. ++....-......-+
T Consensus 217 ~---g~~~~~~~~~~~~~~-~~i~~d~~g~l~v~~~~~-------------~~i~~~~~-~g---~~~~~~~~~~~~~~~ 275 (300)
T 2qc5_A 217 T---GEISEYDIPTPNARP-HAITAGKNSEIWFTEWGA-------------NQIGRITN-DN---TIQEYQLQTENAEPH 275 (300)
T ss_dssp T---CCEEEEECSSTTCCE-EEEEECSTTCEEEEETTT-------------TEEEEECT-TS---CEEEEECCSTTCCCC
T ss_pred C---CcEEEEECCCCCCCc-eEEEECCCCCEEEeccCC-------------CeEEEECC-CC---cEEEEECCccCCccc
Confidence 2 333322221 1111 233455789999876321 14578998 44 444331110011113
Q ss_pred eeeeEcCCCcEEEecC
Q 042303 363 SVSVLLPDGKVLIAGS 378 (519)
Q Consensus 363 s~a~LlpdG~V~v~GG 378 (519)
+. .+.+||+||++..
T Consensus 276 ~i-~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 276 GI-TFGKDGSVWFALK 290 (300)
T ss_dssp CE-EECTTSCEEEECS
T ss_pred ee-EeCCCCCEEEEcc
Confidence 33 3468999999875
No 59
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.63 E-value=0.11 Score=50.33 Aligned_cols=223 Identities=13% Similarity=0.138 Sum_probs=113.4
Q ss_pred eccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCc-cccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCc
Q 042303 76 LTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEP-RWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQ 153 (519)
Q Consensus 76 ~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~-R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~ 153 (519)
+-+||+++++|+.+ ..++++|.. +..-.. . +... ..-.++...++|+.++.|+.+ .++.+| ..+++-
T Consensus 21 fsp~~~~l~s~~~d---g~v~lWd~~-~~~~~~--~-~~~~~~~v~~~~~~~~~~~l~s~s~d-~~i~vwd~~~~~~--- 89 (304)
T 2ynn_A 21 FHPTEPWVLTTLYS---GRVELWNYE-TQVEVR--S-IQVTETPVRAGKFIARKNWIIVGSDD-FRIRVFNYNTGEK--- 89 (304)
T ss_dssp ECSSSSEEEEEETT---SEEEEEETT-TTEEEE--E-EECCSSCEEEEEEEGGGTEEEEEETT-SEEEEEETTTCCE---
T ss_pred ECCCCCEEEEEcCC---CcEEEEECC-CCceeE--E-eeccCCcEEEEEEeCCCCEEEEECCC-CEEEEEECCCCcE---
Confidence 45689999998854 578899976 433211 1 2211 112344556789999998876 456777 544311
Q ss_pred ccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCCC
Q 042303 154 SIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPASG 231 (519)
Q Consensus 154 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g 231 (519)
...+ .... .... .+...+++++++.|+.+ ..+||..++.-. ...+.+ ... .-
T Consensus 90 --~~~~-~~h~----------------~~v~-~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~--~~~~~~-h~~---~v 143 (304)
T 2ynn_A 90 --VVDF-EAHP----------------DYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWAL--EQTFEG-HEH---FV 143 (304)
T ss_dssp --EEEE-ECCS----------------SCEE-EEEECSSSSEEEEEETTSCEEEEEGGGTTEE--EEEECC-CCS---CE
T ss_pred --EEEE-eCCC----------------CcEE-EEEEcCCCCEEEEECCCCeEEEEECCCCcch--hhhhcc-cCC---cE
Confidence 1111 1000 0000 12334788888888754 678898776321 111111 111 00
Q ss_pred cEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEeccCCcceeeceeEE--ec
Q 042303 232 MSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTI--LP 309 (519)
Q Consensus 232 ~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vv--Lp 309 (519)
.++.+ .| .++.+++.|+.+ .++..+|+........... ...+.-..... .+
T Consensus 144 ~~v~~--~p-------~~~~~l~sgs~D-----------------~~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 196 (304)
T 2ynn_A 144 MCVAF--NP-------KDPSTFASGCLD-----------------RTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLP 196 (304)
T ss_dssp EEEEE--CT-------TCTTEEEEEETT-----------------SEEEEEETTCSSCSEEEEC-CCTTCEEEEEECCST
T ss_pred EEEEE--CC-------CCCCEEEEEeCC-----------------CeEEEEECCCCCccceecc-CCcCcEEEEEEEEcC
Confidence 11211 11 156788888765 1344566643222222211 11111111111 35
Q ss_pred CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCccee-eecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 310 TGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRF-QELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 310 dG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
|++.++.|+.+. ++.+||..+. +- ..+.. -...-.....-|++++++.|+...
T Consensus 197 ~~~~l~s~s~D~-------------~i~iWd~~~~---~~~~~~~~---h~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 197 DKPYMITASDDL-------------TIKIWDYQTK---SCVATLEG---HMSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp TCCEEEEEETTS-------------EEEEEETTTT---EEEEEEEC---CSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCEEEEEcCCC-------------eEEEEeCCCC---ccceeeCC---CCCCEEEEEECCCCCEEEEEcCCC
Confidence 888888887641 5789998876 32 12211 111112345679999999998643
No 60
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.33 Score=48.42 Aligned_cols=267 Identities=9% Similarity=0.070 Sum_probs=123.3
Q ss_pred eEEEEECCCCcEE-ECccC-CCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCC--ccccCCCCCCC-ccccceEE
Q 042303 49 HSVLFDIETAKLK-PLKIQ-TDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTC--DWIEYPTALAE-PRWYSTQV 123 (519)
Q Consensus 49 ~~~~yDp~t~~w~-~l~~~-~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~--~W~~~~~~m~~-~R~y~s~~ 123 (519)
...+||..+++-. ++... +..........+||+++++|+.+ ..+++||.. +. ....... +.. ...-.+++
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~vw~~~-~~~~~~~~~~~-~~~h~~~v~~~~ 120 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN---GSLELYSTN-EANNAINSMAR-FSNHSSSVKTVK 120 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS---SCEEEECCS-STTSCCCEEEE-CCCSSSCCCEEE
T ss_pred eEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC---CeEEEeecc-cccccccchhh-ccCCccceEEEE
Confidence 3568888876532 22111 11112223445789999988753 468889876 31 1111111 221 12223445
Q ss_pred EcCC-CcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeC-CcEEEEeC
Q 042303 124 TLPD-GGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTD-GNLFIFSN 200 (519)
Q Consensus 124 ~L~d-G~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~-G~Ifv~Gg 200 (519)
..++ +++++.|+.++ .+.+| ..+.+-... ...+....... ++ ..... .+...++ +++++.|+
T Consensus 121 ~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~~~-~~~~~~~~~~~---~~---------~~~v~-~~~~~~~~~~~l~~~~ 185 (416)
T 2pm9_A 121 FNAKQDNVLASGGNNG-EIFIWDMNKCTESPS-NYTPLTPGQSM---SS---------VDEVI-SLAWNQSLAHVFASAG 185 (416)
T ss_dssp ECSSSTTBEEEECSSS-CEEBCBTTTTSSCTT-TCCCBCCCCSC---CS---------SCCCC-EEEECSSCTTEEEEES
T ss_pred EcCCCCCEEEEEcCCC-eEEEEECCCCccccc-ccccccccccc---CC---------CCCee-EEEeCCCCCcEEEEEc
Confidence 5566 88888888763 45566 433210000 00000000000 00 00111 1223456 78888887
Q ss_pred Cc--eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCc
Q 042303 201 NR--SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQD 278 (519)
Q Consensus 201 ~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s 278 (519)
.+ ..+||..+.+....+.. ..........-.++.+ .| ...+++++|+.+.. ...
T Consensus 186 ~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~v~~~~~--~~-------~~~~~l~~~~~d~~--------------~~~ 241 (416)
T 2pm9_A 186 SSNFASIWDLKAKKEVIHLSY-TSPNSGIKQQLSVVEW--HP-------KNSTRVATATGSDN--------------DPS 241 (416)
T ss_dssp SSSCEEEEETTTTEEEEEECC-CCCSSCCCCCEEEEEE--CS-------SCTTEEEEEECCSS--------------SCC
T ss_pred CCCCEEEEECCCCCcceEEec-cccccccCCceEEEEE--CC-------CCCCEEEEEECCCC--------------Cce
Confidence 54 67899998875543321 1000000000111111 11 12357777765410 013
Q ss_pred eEEEEecCCCCceEeccCC--cceeeceeEEec-CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCccee-eecCC
Q 042303 279 CGRIRITEPNPVWKKEMMP--TRRVMGDMTILP-TGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRF-QELAP 354 (519)
Q Consensus 279 ~~~~d~~~~~~~W~~~~M~--~~R~~~~~vvLp-dG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-~~~~~ 354 (519)
+..+|+... .-....+. ....-.+....| |++++++|+.+ + .+.+||..+. +- ..+..
T Consensus 242 i~~~d~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-g------------~v~~wd~~~~---~~~~~~~~ 303 (416)
T 2pm9_A 242 ILIWDLRNA--NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-N------------TVLLWNPESA---EQLSQFPA 303 (416)
T ss_dssp CCEEETTST--TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-S------------EEEEECSSSC---CEEEEEEC
T ss_pred EEEEeCCCC--CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-C------------CEEEeeCCCC---ccceeecC
Confidence 456776531 11111221 111122223456 89999998864 1 4689998776 32 22211
Q ss_pred CCcCCccceeeeEcCCC-cEEEecCCC
Q 042303 355 TTIPRMYHSVSVLLPDG-KVLIAGSNT 380 (519)
Q Consensus 355 ~~~~R~yhs~a~LlpdG-~V~v~GG~~ 380 (519)
.. ..-.....-||| +++++|+..
T Consensus 304 ~~---~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 304 RG---NWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp SS---SCCCCEEECTTCTTEEEECCSS
T ss_pred CC---CceEEEEECCCCCCEEEEEecC
Confidence 11 111223456898 899998864
No 61
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.56 E-value=0.22 Score=58.19 Aligned_cols=254 Identities=11% Similarity=0.082 Sum_probs=123.0
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcC--
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLP-- 126 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~-- 126 (519)
..+||..+++....-..+........+.+||+.+++|+.+ ..+.++|.. +.+.... +.. ...-.+++..+
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~v~vwd~~-~~~~~~~---~~~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD---KKVKIWDSA-TGKLVHT---YDEHSEQVNCCHFTNKS 711 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCEEEE---EECCSSCEEEEEECSSS
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEECC-CCceEEE---EcCCCCcEEEEEEecCC
Confidence 4588888876432211222222234566799999998753 578999987 4433211 211 12222333334
Q ss_pred CCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--e
Q 042303 127 DGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--S 203 (519)
Q Consensus 127 dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~ 203 (519)
++.+++.|+.+ ..+.+| ..+++. ...+ .... .... .+...++|+.++.|+.+ .
T Consensus 712 ~~~~l~sg~~d-~~v~vwd~~~~~~-----~~~~-~~h~----------------~~v~-~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 712 NHLLLATGSND-FFLKLWDLNQKEC-----RNTM-FGHT----------------NSVN-HCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp SCCEEEEEETT-SCEEEEETTSSSE-----EEEE-CCCS----------------SCEE-EEEECSSTTEEEEEESSSEE
T ss_pred CceEEEEEeCC-CeEEEEECCCcch-----hhee-cCCC----------------CCEE-EEEEecCCCEEEEEECCCeE
Confidence 45577777655 456666 443311 1111 0000 0000 12345789988888754 5
Q ss_pred EEeeCCCCeEEEEccCCC--CCCCccC--CCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCce
Q 042303 204 ILFDPKANRVIREYPVLT--GGSRNYP--ASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDC 279 (519)
Q Consensus 204 ~~yDp~t~~w~~~~p~~p--~~~r~~~--~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~ 279 (519)
.+||..+.+....+.... ......+ .......+.. ..+++.+++++.. .+
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--------s~dg~~l~~~~~~------------------~v 821 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW--------SADGDKIIVAAKN------------------KV 821 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB--------CTTSSEEEEEETT------------------EE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEE--------CCCCCEEEEEcCC------------------cE
Confidence 678988776443221100 0000000 0000000111 1267777766421 23
Q ss_pred EEEEecCCCCceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceee-ecCCCCc
Q 042303 280 GRIRITEPNPVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQ-ELAPTTI 357 (519)
Q Consensus 280 ~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~ 357 (519)
..+|+. +...... .......-......|+|+.+++|+.+ | .+.+||..+. +-. .+.. ..
T Consensus 822 ~~~d~~--~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-g------------~v~vwd~~~~---~~~~~~~~-h~ 882 (1249)
T 3sfz_A 822 LLFDIH--TSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ-Y------------CVELWNIDSR---LKVADCRG-HL 882 (1249)
T ss_dssp EEEETT--TCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS-S------------CEEEEETTTT---EEEEEECC-CS
T ss_pred EEEEec--CCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC-C------------eEEEEEcCCC---ceeeecCC-Cc
Confidence 456654 2222221 11111222233567899999998764 1 4689998876 321 1211 11
Q ss_pred CCccceeeeEcCCCcEEEecCCCC
Q 042303 358 PRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 358 ~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
..-......|||+.+++|+...
T Consensus 883 --~~v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 883 --SWVHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp --SCEEEEEECTTSSEEEEEETTS
T ss_pred --cceEEEEECCCCCEEEEEeCCC
Confidence 1112334578999988888654
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.089 Score=52.47 Aligned_cols=24 Identities=4% Similarity=0.153 Sum_probs=17.0
Q ss_pred EeeCCcEEEEeCCc--eEEeeCCCCe
Q 042303 189 LVTDGNLFIFSNNR--SILFDPKANR 212 (519)
Q Consensus 189 ~~~~G~Ifv~Gg~~--~~~yDp~t~~ 212 (519)
..++|+.++.|+.+ ..+||..+.+
T Consensus 255 ~~~~~~~l~~~~~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 255 FNDTNKLLLSASDDGTLRIWHGGNGN 280 (425)
T ss_dssp EETTTTEEEEEETTSCEEEECSSSBS
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 34688888887643 6678887755
No 63
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.55 E-value=0.3 Score=47.09 Aligned_cols=92 Identities=13% Similarity=0.024 Sum_probs=45.6
Q ss_pred EEEEECC-CCcEEECccC-CCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCC-CCccccCCCCCCCccccceEEEcC
Q 042303 50 SVLFDIE-TAKLKPLKIQ-TDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCD-TCDWIEYPTALAEPRWYSTQVTLP 126 (519)
Q Consensus 50 ~~~yDp~-t~~w~~l~~~-~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~-~~~W~~~~~~m~~~R~y~s~~~L~ 126 (519)
..+||.. +++++.+... ........++.+||+.+++++..+ ..+.+|+... +.++..+.. +.....-...+.-+
T Consensus 17 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~ 93 (343)
T 1ri6_A 17 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFAAE-SALPGSLTHISTDH 93 (343)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEE-EECSSCCSEEEECT
T ss_pred EEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCCCCceeeccc-cccCCCCcEEEEcC
Confidence 3466653 4444443322 111223345667888666665432 4677766430 345544332 32222223455557
Q ss_pred CCcEEEEcCCCCCceEEe
Q 042303 127 DGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 127 dG~V~viGG~~~~~~E~y 144 (519)
||+.+++++.....+.+|
T Consensus 94 dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 94 QGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp TSSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEecCCCeEEEE
Confidence 888555555444456666
No 64
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.55 E-value=0.065 Score=53.17 Aligned_cols=89 Identities=11% Similarity=0.027 Sum_probs=50.7
Q ss_pred EEEEECCCCcEEECccCCC--cccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCc-cccCCCCCC-CccccceEEEc
Q 042303 50 SVLFDIETAKLKPLKIQTD--TWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCD-WIEYPTALA-EPRWYSTQVTL 125 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~--~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~-W~~~~~~m~-~~R~y~s~~~L 125 (519)
..+||..++.|..+..+.. .......+.+||+++++|+.+ ..+++||.. +.. |..... +. ....-.+++..
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~-~~~~~~~~~~-~~~~~~~v~~~~~~ 109 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKR-PDGTWKQTLV-LLRLNRAATFVRWS 109 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---SSEEEC-------CCCCEEE-CCCCSSCEEEEECC
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---CeEEEEEcC-CCCceeeeeE-ecccCCceEEEEEC
Confidence 3478888888777665532 122233456789999998754 468888876 444 443322 22 22223344455
Q ss_pred CCCcEEEEcCCCCCceEEe
Q 042303 126 PDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 126 ~dG~V~viGG~~~~~~E~y 144 (519)
+||+.++.|+.++ .+.+|
T Consensus 110 ~~~~~l~~~~~d~-~i~iw 127 (377)
T 3dwl_C 110 PNEDKFAVGSGAR-VISVC 127 (377)
T ss_dssp TTSSCCEEEESSS-CEEEC
T ss_pred CCCCEEEEEecCC-eEEEE
Confidence 6899999988763 45566
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.53 E-value=0.25 Score=49.10 Aligned_cols=62 Identities=13% Similarity=-0.062 Sum_probs=36.5
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
.+.+||+++++|+.+ ..+.+||.. ......+.. ....-.+++..++|+.+++|+.++ .+.+|
T Consensus 115 ~~s~~~~~l~~~~~d---g~i~i~~~~-~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw 176 (425)
T 1r5m_A 115 AWSHDGNSIVTGVEN---GELRLWNKT-GALLNVLNF---HRAPIVSVKWNKDGTHIISMDVEN-VTILW 176 (425)
T ss_dssp EECTTSSEEEEEETT---SCEEEEETT-SCEEEEECC---CCSCEEEEEECTTSSEEEEEETTC-CEEEE
T ss_pred EEcCCCCEEEEEeCC---CeEEEEeCC-CCeeeeccC---CCccEEEEEECCCCCEEEEEecCC-eEEEE
Confidence 456789999998754 468888843 222222211 122233455567899888887653 34455
No 66
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.50 E-value=0.25 Score=48.46 Aligned_cols=92 Identities=12% Similarity=0.023 Sum_probs=47.7
Q ss_pred eEEEEECCCCcEEECccCC--CcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC----------Cc
Q 042303 49 HSVLFDIETAKLKPLKIQT--DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA----------EP 116 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~----------~~ 116 (519)
...+||..+++++.+.... .......++.+||+.+++.+.. ...+.+||.....+...+.. +. ..
T Consensus 64 ~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~~g~~~~~~~-~~~~~~~p~~~~~~ 140 (347)
T 3hfq_A 64 GIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAADGALTLTDT-VQHSGHGPRPEQDG 140 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECTTSCEEEEEE-EECCCCCSSTTCSS
T ss_pred eEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCCCCCeeecce-eecCCCCCCccccC
Confidence 3457898888877665421 1122234556889855555432 24677777531222222111 10 01
Q ss_pred cccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 117 RWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 117 R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
.+-+.++.-+||++|+.+.. ...+.+|
T Consensus 141 ~~~~~~~~spdg~l~v~~~~-~~~v~~~ 167 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLG-SDKVYVY 167 (347)
T ss_dssp CCEEEEEECTTSCEEEEETT-TTEEEEE
T ss_pred CCceEEEECCCCcEEEEeCC-CCEEEEE
Confidence 12234566689997766543 3456677
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.14 Score=50.26 Aligned_cols=89 Identities=13% Similarity=0.158 Sum_probs=50.8
Q ss_pred EEEEECCCCcEEECccCCC--cccCCCeeccC--CeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEE
Q 042303 50 SVLFDIETAKLKPLKIQTD--TWCSSGGLTVD--GHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVT 124 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~--~~c~~~~~l~d--G~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~ 124 (519)
..+||...+++..+..+.. .........++ ++++++|+.+ ..+++||.. +.+|..... +.. ...-.+++.
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iwd~~-~~~~~~~~~-~~~~~~~v~~~~~ 109 (379)
T 3jrp_A 35 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE-NGRWSQIAV-HAVHSASVNSVQW 109 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEE
T ss_pred EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC---CEEEEEEcC-CCceeEeee-ecCCCcceEEEEe
Confidence 4577777666655443321 11111223344 8889988754 468888877 666654432 322 222334455
Q ss_pred cCC--CcEEEEcCCCCCceEEe
Q 042303 125 LPD--GGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 125 L~d--G~V~viGG~~~~~~E~y 144 (519)
.++ |+.+++|+.++ .+.+|
T Consensus 110 ~~~~~~~~l~~~~~d~-~i~v~ 130 (379)
T 3jrp_A 110 APHEYGPLLLVASSDG-KVSVV 130 (379)
T ss_dssp CCGGGCSEEEEEETTS-EEEEE
T ss_pred CCCCCCCEEEEecCCC-cEEEE
Confidence 566 88999988763 45666
No 68
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.48 E-value=0.61 Score=44.19 Aligned_cols=220 Identities=13% Similarity=0.203 Sum_probs=105.7
Q ss_pred eccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCC--CCCccccceEEEc--CCCcEEEEcCCCCCceEEeCCCCCCC
Q 042303 76 LTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTA--LAEPRWYSTQVTL--PDGGFIVVGGRGAFSYEYIPPQGQSN 151 (519)
Q Consensus 76 ~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~--m~~~R~y~s~~~L--~dG~V~viGG~~~~~~E~yP~~~~w~ 151 (519)
+.++|+++++... ...+.+||+. .......... -...-..+...++ .+|++||.+......+..|..+++.
T Consensus 37 ~~~~g~l~v~~~~---~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~- 111 (286)
T 1q7f_A 37 VNAQNDIIVADTN---NHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQF- 111 (286)
T ss_dssp ECTTCCEEEEEGG---GTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCE-
T ss_pred ECCCCCEEEEECC---CCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcE-
Confidence 3457888887532 2468889876 3322222110 0011123334444 5899999874322345566222211
Q ss_pred CcccccccchhccccccCCcccccccccccCccceEE-EeeCCcEEEEeC--CceEEeeCCCCeEEEEccCCCCCCCccC
Q 042303 152 KQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVN-LVTDGNLFIFSN--NRSILFDPKANRVIREYPVLTGGSRNYP 228 (519)
Q Consensus 152 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~-~~~~G~Ifv~Gg--~~~~~yDp~t~~w~~~~p~~p~~~r~~~ 228 (519)
...+... ....|... +.++|+||+... ....+||+...... .+.. +. ....|
T Consensus 112 ----~~~~~~~------------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~-~~~~p 166 (286)
T 1q7f_A 112 ----VRKFGAT------------------ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-KFGC-SK-HLEFP 166 (286)
T ss_dssp ----EEEECTT------------------TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE-EEEC-TT-TCSSE
T ss_pred ----EEEecCc------------------cCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE-EeCC-CC-ccCCc
Confidence 0001000 00123333 346899998853 34678998765433 3321 11 11111
Q ss_pred CCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec----cCCcceeece
Q 042303 229 ASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE----MMPTRRVMGD 304 (519)
Q Consensus 229 ~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~----~M~~~R~~~~ 304 (519)
..+.+ ..+++||+....+ ..+.+||+. ....... .+..++ +
T Consensus 167 ---~~i~~----------~~~g~l~v~~~~~-----------------~~i~~~~~~--g~~~~~~~~~g~~~~p~---~ 211 (286)
T 1q7f_A 167 ---NGVVV----------NDKQEIFISDNRA-----------------HCVKVFNYE--GQYLRQIGGEGITNYPI---G 211 (286)
T ss_dssp ---EEEEE----------CSSSEEEEEEGGG-----------------TEEEEEETT--CCEEEEESCTTTSCSEE---E
T ss_pred ---EEEEE----------CCCCCEEEEECCC-----------------CEEEEEcCC--CCEEEEEccCCccCCCc---E
Confidence 12221 1268888875432 235567753 2211111 123332 2
Q ss_pred eEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCC-CCcCCccceeeeEcCCCcEEEec
Q 042303 305 MTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAP-TTIPRMYHSVSVLLPDGKVLIAG 377 (519)
Q Consensus 305 ~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~-~~~~R~yhs~a~LlpdG~V~v~G 377 (519)
.++-+||+|||...... ..+.+||+... ....+.. .... .-++.+ +-|||++||+.
T Consensus 212 i~~d~~G~l~v~~~~~~------------~~i~~~~~~g~---~~~~~~~~~~~~-~~~~i~-~~~~g~l~vs~ 268 (286)
T 1q7f_A 212 VGINSNGEILIADNHNN------------FNLTIFTQDGQ---LISALESKVKHA-QCFDVA-LMDDGSVVLAS 268 (286)
T ss_dssp EEECTTCCEEEEECSSS------------CEEEEECTTSC---EEEEEEESSCCS-CEEEEE-EETTTEEEEEE
T ss_pred EEECCCCCEEEEeCCCC------------EEEEEECCCCC---EEEEEcccCCCC-cceeEE-ECCCCcEEEEC
Confidence 24458999999874321 14689997654 3222221 1111 112343 45899999984
No 69
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.43 E-value=0.23 Score=52.22 Aligned_cols=241 Identities=12% Similarity=0.116 Sum_probs=119.5
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCc
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGG 129 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~ 129 (519)
..+||..+.....+.... ......++.+||+.+++|+.+ ..+++||.. ...-..+.. ....-.+++.-+||+
T Consensus 327 i~~w~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~-~~~~~~~~~---~~~~v~~~~~s~dg~ 398 (577)
T 2ymu_A 327 VKLWNRNGQHLQTLTGHS-SSVWGVAFSPDGQTIASASDD---KTVKLWNRN-GQLLQTLTG---HSSSVRGVAFSPDGQ 398 (577)
T ss_dssp EEEEETTSCEEEEECCCS-SCEEEEEECTTSSEEEEEETT---SEEEEEETT-CCEEEEEEC---CSSCEEEEEECTTSS
T ss_pred EEEEeCCCCeeEEEeCCC-CCEEEEEECCCCCEEEEEeCC---CEEEEEcCC-CCEEEEecC---CCCCeEEEEECCCCC
Confidence 346777666554443221 122224566799999998743 468888864 222211111 111122345557999
Q ss_pred EEEEcCCCCCceEEeCCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEee
Q 042303 130 FIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFD 207 (519)
Q Consensus 130 V~viGG~~~~~~E~yP~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yD 207 (519)
.++.|+.+ ..+.+|..+.+ ....+.. +. .... .+...+|++.++.++.+ ..+||
T Consensus 399 ~l~~~~~d-~~v~~~~~~~~------~~~~~~~--~~--------------~~v~-~~~~s~d~~~l~~~~~d~~v~~w~ 454 (577)
T 2ymu_A 399 TIASASDD-KTVKLWNRNGQ------LLQTLTG--HS--------------SSVW-GVAFSPDDQTIASASDDKTVKLWN 454 (577)
T ss_dssp CEEEEETT-SEEEEECTTCC------EEEEEEC--CS--------------SCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEEEeCC-CEEEEEeCCCC------EEEEecC--CC--------------CCeE-EEEECCCCCEEEEEcCCCEEEEEE
Confidence 99988865 35666632221 1111100 00 0000 12335789888887654 56788
Q ss_pred CCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCC
Q 042303 208 PKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEP 287 (519)
Q Consensus 208 p~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~ 287 (519)
...... +.+..- .. + -.++.+ ..++++++.|+.+. .+..+|..
T Consensus 455 ~~~~~~-~~~~~~----~~-~--v~~~~~----------spd~~~las~~~d~-----------------~i~iw~~~-- 497 (577)
T 2ymu_A 455 RNGQLL-QTLTGH----SS-S--VRGVAF----------SPDGQTIASASDDK-----------------TVKLWNRN-- 497 (577)
T ss_dssp TTSCEE-EEEECC----SS-C--EEEEEE----------CTTSCEEEEEETTS-----------------EEEEEETT--
T ss_pred CCCCEE-EEEcCC----CC-C--EEEEEE----------cCCCCEEEEEeCCC-----------------EEEEEcCC--
Confidence 655432 223211 10 0 011111 12788888887641 23345532
Q ss_pred CCceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeee
Q 042303 288 NPVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSV 366 (519)
Q Consensus 288 ~~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ 366 (519)
.+-... .-...+.. +....|||+.++.++.+ + .+.+||.... ....+.... .+ -....
T Consensus 498 -~~~~~~~~~h~~~v~-~l~~s~dg~~l~s~~~d-g------------~v~lwd~~~~---~~~~~~~h~-~~--v~~~~ 556 (577)
T 2ymu_A 498 -GQLLQTLTGHSSSVR-GVAFSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTGHS-SS--VWGVA 556 (577)
T ss_dssp -SCEEEEEECCSSCEE-EEEECTTSSCEEEEETT-S------------EEEEECTTSC---EEEEEECCS-SC--EEEEE
T ss_pred -CCEEEEEeCCCCCEE-EEEEcCCCCEEEEEECc-C------------EEEEEeCCCC---EEEEEcCCC-CC--EEEEE
Confidence 111111 11112222 22356999999998764 1 4688995433 333332110 01 11234
Q ss_pred EcCCCcEEEecCCC
Q 042303 367 LLPDGKVLIAGSNT 380 (519)
Q Consensus 367 LlpdG~V~v~GG~~ 380 (519)
..|||+.++.||..
T Consensus 557 fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 557 FSPDGQTIASASSD 570 (577)
T ss_dssp ECTTSSCEEEEETT
T ss_pred EcCCCCEEEEEeCC
Confidence 57999999988764
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.35 E-value=0.3 Score=53.87 Aligned_cols=88 Identities=13% Similarity=0.151 Sum_probs=52.6
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~d 127 (519)
...+||..+++....-..+..........+||+.+++|+.+ ..+.+||.. +.+.... +.. ...-.+.+.-+|
T Consensus 36 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~-~~~~~~~---~~~~~~~v~~~~~s~~ 108 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN-TGEKVVD---FEAHPDYIRSIAVHPT 108 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT-TCCEEEE---EECCSSCEEEEEECSS
T ss_pred EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC---CeEEEEECC-CCcEEEE---EecCCCCEEEEEEeCC
Confidence 35688888876543222233333345567799999998753 578899976 4443321 221 122234455578
Q ss_pred CcEEEEcCCCCCceEEe
Q 042303 128 GGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y 144 (519)
|+.+++|+.+ ..+.+|
T Consensus 109 ~~~l~~~~~d-g~i~vw 124 (814)
T 3mkq_A 109 KPYVLSGSDD-LTVKLW 124 (814)
T ss_dssp SSEEEEEETT-SEEEEE
T ss_pred CCEEEEEcCC-CEEEEE
Confidence 9888888765 356666
No 71
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.043 Score=61.14 Aligned_cols=241 Identities=12% Similarity=0.037 Sum_probs=115.6
Q ss_pred ccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccc-eEEEcCC--CcEEEEcCCCCCceEEe-CCCCCCCC
Q 042303 77 TVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYS-TQVTLPD--GGFIVVGGRGAFSYEYI-PPQGQSNK 152 (519)
Q Consensus 77 l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~-s~~~L~d--G~V~viGG~~~~~~E~y-P~~~~w~~ 152 (519)
-+||+.+++||.+ ..+++||.. ..++..... +...+..- +++..++ |..++.|+.++ .+.+| ..+++|.
T Consensus 18 s~dg~~latg~~d---g~I~vwd~~-~~~~~~~~~-l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-~I~vwd~~~~~~~- 90 (753)
T 3jro_A 18 DYYGKRLATCSSD---KTIKIFEVE-GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENGRWS- 90 (753)
T ss_dssp CSSSCCEEEEETT---TEEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEECCTTSCSEEEEEETTS-CEEEEEEETTEEE-
T ss_pred CCCCCeEEEEECC---CcEEEEecC-CCCCcccee-ccCCcCceEEEEecCCCCCCEEEEEeCCC-eEEEEECCCCccc-
Confidence 3578888888753 478888875 455544332 33222222 2333355 89999998764 45566 4443221
Q ss_pred cccccccchhccccccCCcccccccccccCccceEEEeeC--CcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccC
Q 042303 153 QSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTD--GNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYP 228 (519)
Q Consensus 153 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~--G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~ 228 (519)
....+.... .... .+...++ |++++.|+.+ ..+||..++.-.... .+.+ ...
T Consensus 91 ---~~~~~~~h~----------------~~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~-~~~~-~~~-- 146 (753)
T 3jro_A 91 ---QIAVHAVHS----------------ASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDA-HAI-- 146 (753)
T ss_dssp ---EEEEECCCS----------------SCEE-EEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-EEEC-CSS--
T ss_pred ---ccccccCCC----------------CCeE-EEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-Eeec-CCC--
Confidence 000000000 0000 1223456 8888888764 567888765211000 0010 000
Q ss_pred CCCcEEeccccccc-----CCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCc-cee
Q 042303 229 ASGMSVLLPIKLHA-----GHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPT-RRV 301 (519)
Q Consensus 229 ~~g~av~l~l~~~~-----~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~-~R~ 301 (519)
.-.++.+ .|.. ......+++++++|+.+ ..+..+|+......+... .+.. ...
T Consensus 147 -~v~~l~~--~p~~~~~~~~~~~~~d~~~l~sgs~d-----------------g~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 147 -GVNSASW--APATIEEDGEHNGTKESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp -CEEEEEE--CCCC---------CGGGCCEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred -ceEEEEe--cCcccccccccccCCCCCEEEEEECC-----------------CeEEEEeccCCcccceeeeeecCCCCc
Confidence 0011111 0000 00000146777777764 235567776444445443 3321 111
Q ss_pred eceeEEecC---CcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecC
Q 042303 302 MGDMTILPT---GDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGS 378 (519)
Q Consensus 302 ~~~~vvLpd---G~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG 378 (519)
-.+...-|+ |+++++||.+ | .+.+||..+.....-..+.........-.....-|||+.+++||
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~D-g------------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESS-S------------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred EEEEEeccCCCCCCEEEEEecC-C------------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 223345688 8999998864 1 46899988762211111111111111112234568999999988
Q ss_pred CCC
Q 042303 379 NTH 381 (519)
Q Consensus 379 ~~~ 381 (519)
..+
T Consensus 274 ~Dg 276 (753)
T 3jro_A 274 GDN 276 (753)
T ss_dssp SSS
T ss_pred CCC
Confidence 643
No 72
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.34 E-value=0.71 Score=44.52 Aligned_cols=92 Identities=11% Similarity=0.015 Sum_probs=50.5
Q ss_pred eEEEEECCCCcE-EECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCC
Q 042303 49 HSVLFDIETAKL-KPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w-~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~d 127 (519)
....||+.+++. ..........+.+.++.+||+.++++....+...+.+||.. +.+.... +.........+.-+|
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~-~~~~~~~---~~~~~~~~~~~~spd 138 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL-KNKFIST---IPIPYDAVGIAISPN 138 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT-TTEEEEE---EECCTTEEEEEECTT
T ss_pred eEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC-CCCeEEE---EECCCCccceEECCC
Confidence 456789988875 22211222223335667888866654332222389999987 5544322 222222345666689
Q ss_pred Cc-EEEEcCCCCCceEEe
Q 042303 128 GG-FIVVGGRGAFSYEYI 144 (519)
Q Consensus 128 G~-V~viGG~~~~~~E~y 144 (519)
|+ +|+.+......+.+|
T Consensus 139 g~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 139 GNGLILIDRSSANTVRRF 156 (331)
T ss_dssp SSCEEEEEETTTTEEEEE
T ss_pred CCEEEEEecCCCceEEEE
Confidence 86 676654433326666
No 73
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.34 E-value=0.41 Score=46.06 Aligned_cols=93 Identities=13% Similarity=-0.006 Sum_probs=44.3
Q ss_pred eEEEEECC--CCcEEECccCC-CcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEc
Q 042303 49 HSVLFDIE--TAKLKPLKIQT-DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTL 125 (519)
Q Consensus 49 ~~~~yDp~--t~~w~~l~~~~-~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L 125 (519)
...+||.. +++++.+.... .......++.+||+.+++++.. ...+.+||..+......... +.....-.+.+.-
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~s 137 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN--AGNVSVTRLEDGLPVGVVDV-VEGLDGCHSANIS 137 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT--TTEEEEEEEETTEEEEEEEE-ECCCTTBCCCEEC
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC--CCeEEEEECCCCcccccccc-ccCCCCceEEEEC
Confidence 45567766 77877654332 1122233456788865555433 24677888620111111111 2222222344555
Q ss_pred CCCcEEEEcCCCCCceEEe
Q 042303 126 PDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 126 ~dG~V~viGG~~~~~~E~y 144 (519)
+||+.+++++.....+.+|
T Consensus 138 ~dg~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 138 PDNRTLWVPALKQDRICLF 156 (343)
T ss_dssp TTSSEEEEEEGGGTEEEEE
T ss_pred CCCCEEEEecCCCCEEEEE
Confidence 7886444443222456666
No 74
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.34 E-value=0.67 Score=44.93 Aligned_cols=69 Identities=9% Similarity=-0.116 Sum_probs=36.0
Q ss_pred eeccCC-eEEEecCCCC---CCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCc-EEEEcCCCCCceEEe-CCCC
Q 042303 75 GLTVDG-HLVGTGGYQG---GANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGG-FIVVGGRGAFSYEYI-PPQG 148 (519)
Q Consensus 75 ~~l~dG-~llv~GG~~~---g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~-V~viGG~~~~~~E~y-P~~~ 148 (519)
++.+|| ++++...... ....+.++|+. +.+.... ......-...+.-+||+ +|+.+..+ ..+.+| +.++
T Consensus 47 ~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~-~~~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~ 121 (353)
T 3vgz_A 47 AYSQQENALWLATSQSRKLDKGGVVYRLDPV-TLEVTQA---IHNDLKPFGATINNTTQTLWFGNTVN-SAVTAIDAKTG 121 (353)
T ss_dssp EEETTTTEEEEEECCCTTTEESEEEEEECTT-TCCEEEE---EEESSCCCSEEEETTTTEEEEEETTT-TEEEEEETTTC
T ss_pred EECCCCCEEEEEcCCCcCCCCCccEEEEcCC-CCeEEEE---EecCCCcceEEECCCCCEEEEEecCC-CEEEEEeCCCC
Confidence 345576 4555442211 14578999987 5443221 11122223455557887 66665543 466677 6554
No 75
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.32 E-value=0.7 Score=49.69 Aligned_cols=92 Identities=9% Similarity=0.004 Sum_probs=48.3
Q ss_pred eEEEEECCCCcEEE-Ccc------CCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCcc-ccc
Q 042303 49 HSVLFDIETAKLKP-LKI------QTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPR-WYS 120 (519)
Q Consensus 49 ~~~~yDp~t~~w~~-l~~------~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R-~y~ 120 (519)
...+||..+++... +.. .+........+.+||+.+++|+.+ +.++++|.. +.+....-. +...- ...
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~-~~~~~~~~~-~~~~~~~~~ 287 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVA-TLKVEKTIP-VGTRIEDQQ 287 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEEEE-CCSSGGGCE
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCceeeeec-CCCCcccee
Confidence 34578888776533 211 111122223456799999998854 579999986 544332111 11110 011
Q ss_pred eEEEcCCCcEEEEcCCCCCceEEe-CCC
Q 042303 121 TQVTLPDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 121 s~~~L~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
..+.. +++.++.++.++ .+.+| +..
T Consensus 288 ~~~~~-~~~~l~s~s~d~-~i~~~~~~~ 313 (611)
T 1nr0_A 288 LGIIW-TKQALVSISANG-FINFVNPEL 313 (611)
T ss_dssp EEEEE-CSSCEEEEETTC-CEEEEETTT
T ss_pred EEEEE-cCCEEEEEeCCC-cEEEEeCCC
Confidence 12233 777777777653 45666 443
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.32 E-value=0.28 Score=57.24 Aligned_cols=246 Identities=10% Similarity=0.053 Sum_probs=122.6
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCc
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGG 129 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~ 129 (519)
..+||..+++....-..+........+.+||+.+++|+.+ ..+++||.. +.+..... .....-.+.+..++++
T Consensus 985 i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d---g~i~vwd~~-~~~~~~~~---~~~~~v~~~~~~~~~~ 1057 (1249)
T 3sfz_A 985 IKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED---SVIQVWNWQ-TGDYVFLQ---AHQETVKDFRLLQDSR 1057 (1249)
T ss_dssp CEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS---SBEEEEETT-TTEEECCB---CCSSCEEEEEECSSSE
T ss_pred EEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC-CCceEEEe---cCCCcEEEEEEcCCCc
Confidence 4577877765433222222233334566799999998854 478899987 55544321 2223334455566666
Q ss_pred EEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEe
Q 042303 130 FIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILF 206 (519)
Q Consensus 130 V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~y 206 (519)
+ +.|+.+ ..+.+| ..+++-. ..+ .... .... .+...+||+.++.|+.+ ..+|
T Consensus 1058 l-~~~~~d-g~v~vwd~~~~~~~-----~~~-~~~~----------------~~v~-~~~~s~d~~~l~s~s~d~~v~iw 1112 (1249)
T 3sfz_A 1058 L-LSWSFD-GTVKVWNVITGRIE-----RDF-TCHQ----------------GTVL-SCAISSDATKFSSTSADKTAKIW 1112 (1249)
T ss_dssp E-EEEESS-SEEEEEETTTTCCC-----EEE-ECCS----------------SCCC-CEEECSSSSSCEEECCSSCCCEE
T ss_pred E-EEEECC-CcEEEEECCCCcee-----EEE-cccC----------------CcEE-EEEECCCCCEEEEEcCCCcEEEE
Confidence 5 445544 356677 4443211 011 0000 0000 13445788888888754 5578
Q ss_pred eCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecC
Q 042303 207 DPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITE 286 (519)
Q Consensus 207 Dp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~ 286 (519)
|..+.+- +..+.+ . .+...-+.. ..+++++++|+.+. .+..+|+..
T Consensus 1113 d~~~~~~---~~~l~~-h-----~~~v~~~~~--------s~dg~~lat~~~dg-----------------~i~vwd~~~ 1158 (1249)
T 3sfz_A 1113 SFDLLSP---LHELKG-H-----NGCVRCSAF--------SLDGILLATGDDNG-----------------EIRIWNVSD 1158 (1249)
T ss_dssp CSSSSSC---SBCCCC-C-----SSCEEEEEE--------CSSSSEEEEEETTS-----------------CCCEEESSS
T ss_pred ECCCcce---eeeecc-C-----CCcEEEEEE--------CCCCCEEEEEeCCC-----------------EEEEEECCC
Confidence 8776552 222221 1 111111111 12788899887651 233566542
Q ss_pred CCCceEecc-------CCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCC
Q 042303 287 PNPVWKKEM-------MPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPR 359 (519)
Q Consensus 287 ~~~~W~~~~-------M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R 359 (519)
........+ ......-.+....|||+.++.+| | .+.+||..++ +-. .......
T Consensus 1159 ~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~---g------------~v~vwd~~~g---~~~--~~~~~~~ 1218 (1249)
T 3sfz_A 1159 GQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG---G------------YLKWWNVATG---DSS--QTFYTNG 1218 (1249)
T ss_dssp SCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES---S------------SEEEBCSSSC---BCC--CCCCCSS
T ss_pred CceEEEeccccccccccccCceEEEEEECCCCCEEEECC---C------------eEEEEECCCC---cee--eeeeccC
Confidence 111111100 11111112234568999998876 1 3578998776 321 1111111
Q ss_pred ccceeeeEcCCCcEEEecCCCC
Q 042303 360 MYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 360 ~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
..-.....-|||+.+++|+..+
T Consensus 1219 ~~i~~~~~s~dg~~l~~~~~dg 1240 (1249)
T 3sfz_A 1219 TNLKKIHVSPDFRTYVTVDNLG 1240 (1249)
T ss_dssp CCCCCCEECSSSCCEEEECTTC
T ss_pred CcccEEEECCCCCEEEEecCCc
Confidence 1111234568999999887643
No 77
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.31 E-value=0.69 Score=47.08 Aligned_cols=243 Identities=15% Similarity=0.092 Sum_probs=117.2
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDG 128 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG 128 (519)
...+||..+++....-..+.. .-..+..++..+++|+.+ ..+.+||.. +.+-.. .+......-..... +|
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~l~s~s~d---g~i~~wd~~-~~~~~~---~~~~~~~~v~~~~~-~~ 249 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTS--TVRCMHLHEKRVVSGSRD---ATLRVWDIE-TGQCLH---VLMGHVAAVRCVQY-DG 249 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSS--CEEEEEEETTEEEEEETT---SEEEEEESS-SCCEEE---EEECCSSCEEEEEE-CS
T ss_pred eEEEEECCcCcEEEEECCCCC--cEEEEEecCCEEEEEeCC---CEEEEEECC-CCcEEE---EEcCCcccEEEEEE-CC
Confidence 345678777654322111111 111222356667777643 578899976 433211 12211222233344 88
Q ss_pred cEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEE
Q 042303 129 GFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SIL 205 (519)
Q Consensus 129 ~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~ 205 (519)
+.+++|+.++ .+.+| ..+.+ ....+.. +.-+...+..+|+.++.|+.+ ..+
T Consensus 250 ~~l~~~~~dg-~i~iwd~~~~~------~~~~~~~-------------------~~~~v~~~~~~~~~l~~~~~d~~i~i 303 (445)
T 2ovr_B 250 RRVVSGAYDF-MVKVWDPETET------CLHTLQG-------------------HTNRVYSLQFDGIHVVSGSLDTSIRV 303 (445)
T ss_dssp SCEEEEETTS-CEEEEEGGGTE------EEEEECC-------------------CSSCEEEEEECSSEEEEEETTSCEEE
T ss_pred CEEEEEcCCC-EEEEEECCCCc------EeEEecC-------------------CCCceEEEEECCCEEEEEeCCCeEEE
Confidence 8888888764 45566 43321 1101100 000112333488888887653 678
Q ss_pred eeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEec
Q 042303 206 FDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRIT 285 (519)
Q Consensus 206 yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~ 285 (519)
||..+.+....+. + ... ....+ ..+++.+++|+.+ ..+..+|+.
T Consensus 304 ~d~~~~~~~~~~~---~-~~~----~v~~~-----------~~~~~~l~~~~~d-----------------g~i~vwd~~ 347 (445)
T 2ovr_B 304 WDVETGNCIHTLT---G-HQS----LTSGM-----------ELKDNILVSGNAD-----------------STVKIWDIK 347 (445)
T ss_dssp EETTTCCEEEEEC---C-CCS----CEEEE-----------EEETTEEEEEETT-----------------SCEEEEETT
T ss_pred EECCCCCEEEEEc---C-Ccc----cEEEE-----------EEeCCEEEEEeCC-----------------CeEEEEECC
Confidence 9998877543332 1 111 11111 1256678888765 134566764
Q ss_pred CCCCceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceee-ecCCCC--cCCcc
Q 042303 286 EPNPVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQ-ELAPTT--IPRMY 361 (519)
Q Consensus 286 ~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~--~~R~y 361 (519)
......+.. .... .....+ +..+++.+++|+.+ | .+.+||..+. +.. .+.... .....
T Consensus 348 ~~~~~~~~~~~~~~-~~~v~~-~~~~~~~l~s~~~d-g------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~ 409 (445)
T 2ovr_B 348 TGQCLQTLQGPNKH-QSAVTC-LQFNKNFVITSSDD-G------------TVKLWDLKTG---EFIRNLVTLESGGSGGV 409 (445)
T ss_dssp TCCEEEEECSTTSC-SSCEEE-EEECSSEEEEEETT-S------------EEEEEETTTC---CEEEEEEECTTGGGTCE
T ss_pred CCcEEEEEccCCCC-CCCEEE-EEECCCEEEEEeCC-C------------eEEEEECCCC---ceeeeeeccccCCCCce
Confidence 211111111 1111 111222 33488999988764 1 5689998887 432 221110 00110
Q ss_pred ceeeeEcCCCcEEEecCCCC
Q 042303 362 HSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 362 hs~a~LlpdG~V~v~GG~~~ 381 (519)
-.....-|||+++++|+..+
T Consensus 410 v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 410 VWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp EEEEEECSSEEEEEEECSSS
T ss_pred EEEEEecCCEEEEEEcccCC
Confidence 11123458999999998754
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.29 E-value=0.054 Score=53.28 Aligned_cols=64 Identities=16% Similarity=0.111 Sum_probs=40.8
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
.+.+||+++++|+.+ ..+++||.. +.+|..... +.. ...-.+++..+||+.+++|+.++ .+.+|
T Consensus 15 ~~s~~~~~l~~~~~d---~~v~i~~~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~dg-~i~vw 79 (372)
T 1k8k_C 15 AWNKDRTQIAICPNN---HEVHIYEKS-GNKWVQVHE-LKEHNGQVTGVDWAPDSNRIVTCGTDR-NAYVW 79 (372)
T ss_dssp EECTTSSEEEEECSS---SEEEEEEEE-TTEEEEEEE-EECCSSCEEEEEEETTTTEEEEEETTS-CEEEE
T ss_pred EECCCCCEEEEEeCC---CEEEEEeCC-CCcEEeeee-ecCCCCcccEEEEeCCCCEEEEEcCCC-eEEEE
Confidence 345688999998753 578899987 565544332 332 22223455557899999988764 45566
No 79
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.27 E-value=0.61 Score=45.10 Aligned_cols=142 Identities=12% Similarity=0.110 Sum_probs=69.2
Q ss_pred eEEEEECCCCcEEECccC-CCcccCCCeeccC---CeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCcccc-ceE-
Q 042303 49 HSVLFDIETAKLKPLKIQ-TDTWCSSGGLTVD---GHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWY-STQ- 122 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~d---G~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y-~s~- 122 (519)
...+||..+++....... +........+.++ |+++++|+.+ ..+.+||.. +.+- ... .+...... .+.
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~-~~~~-~~~-~~~~~~~~v~~~~ 118 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLE-APEM-PVY-SVKGHKEIINAID 118 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTT-SCSS-CSE-EECCCSSCEEEEE
T ss_pred EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCC-CCCc-cEE-EEEecccceEEEe
Confidence 456899998887654322 2112222334455 7888888754 468889876 3320 111 11111111 111
Q ss_pred -----EEcCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEE---EeeCC
Q 042303 123 -----VTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVN---LVTDG 193 (519)
Q Consensus 123 -----~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~---~~~~G 193 (519)
+.-+|++.++.|+.++ .+.+| ....... ......... . .....+...+ ..+++
T Consensus 119 ~~~~~~~s~~~~~l~~~~~d~-~i~vwd~~~~~~~--~~~~~~~~~--~-------------~~~~v~~~~~~~~~~~~~ 180 (357)
T 3i2n_A 119 GIGGLGIGEGAPEIVTGSRDG-TVKVWDPRQKDDP--VANMEPVQG--E-------------NKRDCWTVAFGNAYNQEE 180 (357)
T ss_dssp EESGGGCC-CCCEEEEEETTS-CEEEECTTSCSSC--SEEECCCTT--S-------------CCCCEEEEEEECCCC-CC
T ss_pred eccccccCCCccEEEEEeCCC-eEEEEeCCCCCCc--ceeccccCC--C-------------CCCceEEEEEEeccCCCC
Confidence 1125888999888763 56677 4433210 000100000 0 0001111111 12689
Q ss_pred cEEEEeCC--ceEEeeCCCCeEE
Q 042303 194 NLFIFSNN--RSILFDPKANRVI 214 (519)
Q Consensus 194 ~Ifv~Gg~--~~~~yDp~t~~w~ 214 (519)
++++.|+. ...+||..+.+-.
T Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 181 RVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp CEEEEEETTSEEEEEETTTTEEE
T ss_pred CEEEEEccCCeEEEEECccCcee
Confidence 99888875 4668999887743
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.26 E-value=0.26 Score=52.06 Aligned_cols=252 Identities=8% Similarity=0.005 Sum_probs=121.3
Q ss_pred eEEEEECCCC----c-EEECccCCCcc-cCCCeecc--CCeEEEecCCCCCCceEEEEeCCCCC------ccccCCCCCC
Q 042303 49 HSVLFDIETA----K-LKPLKIQTDTW-CSSGGLTV--DGHLVGTGGYQGGANTVRYLWTCDTC------DWIEYPTALA 114 (519)
Q Consensus 49 ~~~~yDp~t~----~-w~~l~~~~~~~-c~~~~~l~--dG~llv~GG~~~g~~~v~~ydp~~~~------~W~~~~~~m~ 114 (519)
...+||..+. + ...+.. +... -....+.+ ||+++++|+.+ ..+++||.. +. +...... +.
T Consensus 40 ~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~~l~s~~~d---g~v~vw~~~-~~~~~~~~~~~~~~~-~~ 113 (615)
T 1pgu_A 40 SAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIKGSQYLCSGDES---GKVIVWGWT-FDKESNSVEVNVKSE-FQ 113 (615)
T ss_dssp EEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSSTTCCEEEEEETT---SEEEEEEEE-EEGGGTEEEEEEEEE-EE
T ss_pred eEEEEECCCCCCccccceEEec-CCCceEEEEEECcCCCCCEEEEecCC---CEEEEEeCC-CCcccccccccccch-hh
Confidence 4567888766 3 222221 1111 22334667 99999998853 467888864 22 1211111 22
Q ss_pred -CccccceEEEcCCCcEEEEcCCCCC---ceEEeCCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEe
Q 042303 115 -EPRWYSTQVTLPDGGFIVVGGRGAF---SYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLV 190 (519)
Q Consensus 115 -~~R~y~s~~~L~dG~V~viGG~~~~---~~E~yP~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~ 190 (519)
....-.+++.-+||+.+++++.+.. .+.+|- .++ ....+ .... .... .+...
T Consensus 114 ~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~-----~~~~~-~~~~----------------~~v~-~~~~~ 169 (615)
T 1pgu_A 114 VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGN-----SLGEV-SGHS----------------QRIN-ACHLK 169 (615)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCC-----EEEEC-CSCS----------------SCEE-EEEEC
T ss_pred cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCC-----cceee-ecCC----------------ccEE-EEEEC
Confidence 1223345566679999999886531 233332 110 01111 0000 0000 12334
Q ss_pred eCCc-EEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccC-CeEEEEcCCCCCccccc
Q 042303 191 TDGN-LFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIH-SDILVCGGAAWDAFYYA 266 (519)
Q Consensus 191 ~~G~-Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~-gkI~v~GG~~~~~~~~~ 266 (519)
++|+ +++.|+.+ ..+||..+.+....+..-. ....+ -.++.+ . .+ ++.+++|+.+
T Consensus 170 ~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~--~~~~~--v~~~~~--~--------~~~~~~l~~~~~d------- 228 (615)
T 1pgu_A 170 QSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH--KQGSF--VRDVEF--S--------PDSGEFVITVGSD------- 228 (615)
T ss_dssp SSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS--CTTCC--EEEEEE--C--------STTCCEEEEEETT-------
T ss_pred CCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC--CCCce--EEEEEE--C--------CCCCCEEEEEeCC-------
Confidence 6776 67776643 6689988876544332110 00000 011111 1 25 7888888765
Q ss_pred ccccccccCCCceEEEEecCCCCceEeccC-----CcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeC
Q 042303 267 EDKKQFWPALQDCGRIRITEPNPVWKKEMM-----PTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKT 341 (519)
Q Consensus 267 ~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M-----~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP 341 (519)
..+..+|+.. .+... .+ .....-.+.... +++.+++++.+ + .+.+||.
T Consensus 229 ----------g~i~vwd~~~--~~~~~-~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d-~------------~i~~wd~ 281 (615)
T 1pgu_A 229 ----------RKISCFDGKS--GEFLK-YIEDDQEPVQGGIFALSWL-DSQKFATVGAD-A------------TIRVWDV 281 (615)
T ss_dssp ----------CCEEEEETTT--CCEEE-ECCBTTBCCCSCEEEEEES-SSSEEEEEETT-S------------EEEEEET
T ss_pred ----------CeEEEEECCC--CCEeE-EecccccccCCceEEEEEc-CCCEEEEEcCC-C------------cEEEEEC
Confidence 1344566542 22111 22 222111222233 99999988764 1 4689998
Q ss_pred CCCCcceeee-cCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 342 KEKRHHRFQE-LAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 342 ~t~~g~~W~~-~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
.+. +... +.....+......++..++++.+++|+...
T Consensus 282 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 282 TTS---KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp TTT---EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred CCC---cEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 876 4321 111111111222344456888888887644
No 81
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.26 E-value=0.81 Score=48.00 Aligned_cols=242 Identities=13% Similarity=0.155 Sum_probs=116.6
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCc
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGG 129 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~ 129 (519)
..+||........+..... .....++.+||+.+++|+.+ ..++++|.. ...-..+.. . ...-.+++..+||+
T Consensus 286 i~~w~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~-~~~~~~~~~-~--~~~v~~~~~s~~g~ 357 (577)
T 2ymu_A 286 VKLWNRNGQLLQTLTGHSS-SVWGVAFSPDGQTIASASDD---KTVKLWNRN-GQHLQTLTG-H--SSSVWGVAFSPDGQ 357 (577)
T ss_dssp EEEEETTSCEEEEECCCSS-CEEEEEECTTSSEEEEEETT---SCEEEEETT-SCEEEEECC-C--SSCEEEEEECTTSS
T ss_pred EEEEeCCCcEEEEEecCCC-CeEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCeeEEEeC-C--CCCEEEEEECCCCC
Confidence 3467765444333322111 11123456789988888753 467888865 332222211 1 11122455567999
Q ss_pred EEEEcCCCCCceEEeCCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEee
Q 042303 130 FIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFD 207 (519)
Q Consensus 130 V~viGG~~~~~~E~yP~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yD 207 (519)
.++.|+.+ ..+.+|..+.+ ....+.. +. .... .+...+||+.++.|+.+ ..+||
T Consensus 358 ~l~~~~~d-g~v~~~~~~~~------~~~~~~~--~~--------------~~v~-~~~~s~dg~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 358 TIASASDD-KTVKLWNRNGQ------LLQTLTG--HS--------------SSVR-GVAFSPDGQTIASASDDKTVKLWN 413 (577)
T ss_dssp EEEEEETT-SEEEEEETTCC------EEEEEEC--CS--------------SCEE-EEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEEeCC-CEEEEEcCCCC------EEEEecC--CC--------------CCeE-EEEECCCCCEEEEEeCCCEEEEEe
Confidence 99998765 35666632211 1111100 00 0000 12334789888887654 55788
Q ss_pred CCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCC
Q 042303 208 PKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEP 287 (519)
Q Consensus 208 p~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~ 287 (519)
..... .+.+. + ... .-.++.+ . .+++.+++++.+. .+..+|..
T Consensus 414 ~~~~~-~~~~~---~-~~~---~v~~~~~--s--------~d~~~l~~~~~d~-----------------~v~~w~~~-- 456 (577)
T 2ymu_A 414 RNGQL-LQTLT---G-HSS---SVWGVAF--S--------PDDQTIASASDDK-----------------TVKLWNRN-- 456 (577)
T ss_dssp TTCCE-EEEEE---C-CSS---CEEEEEE--C--------TTSSEEEEEETTS-----------------EEEEEETT--
T ss_pred CCCCE-EEEec---C-CCC---CeEEEEE--C--------CCCCEEEEEcCCC-----------------EEEEEECC--
Confidence 54433 22232 1 110 0011111 1 2677788776541 23445543
Q ss_pred CCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeE
Q 042303 288 NPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVL 367 (519)
Q Consensus 288 ~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~L 367 (519)
...-....-..... .+...-|||+++++++.+. .+.+||.... .-..+.... ... .....
T Consensus 457 ~~~~~~~~~~~~~v-~~~~~spd~~~las~~~d~-------------~i~iw~~~~~---~~~~~~~h~-~~v--~~l~~ 516 (577)
T 2ymu_A 457 GQLLQTLTGHSSSV-RGVAFSPDGQTIASASDDK-------------TVKLWNRNGQ---LLQTLTGHS-SSV--RGVAF 516 (577)
T ss_dssp SCEEEEEECCSSCE-EEEEECTTSCEEEEEETTS-------------EEEEEETTSC---EEEEEECCS-SCE--EEEEE
T ss_pred CCEEEEEcCCCCCE-EEEEEcCCCCEEEEEeCCC-------------EEEEEcCCCC---EEEEEeCCC-CCE--EEEEE
Confidence 11111111111122 2334579999999987541 4688995443 222221110 111 12235
Q ss_pred cCCCcEEEecCCC
Q 042303 368 LPDGKVLIAGSNT 380 (519)
Q Consensus 368 lpdG~V~v~GG~~ 380 (519)
-|||+.+++|+..
T Consensus 517 s~dg~~l~s~~~d 529 (577)
T 2ymu_A 517 SPDGQTIASASDD 529 (577)
T ss_dssp CTTSSCEEEEETT
T ss_pred cCCCCEEEEEECc
Confidence 6999999998864
No 82
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.22 E-value=0.84 Score=43.14 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=48.3
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDG 128 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG 128 (519)
...+||..+++....-..+..........++++.+++|+.+ ..+++++............ +......-..... ++
T Consensus 40 ~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~-~~ 114 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD---TMINGVPLFATSGEDPLYT-LIGHQGNVCSLSF-QD 114 (313)
T ss_dssp EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT---SCEEEEETTCCTTSCC-CE-ECCCSSCEEEEEE-ET
T ss_pred cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC---CeEEEEEeeecCCCCcccc-hhhcccCEEEEEe-cC
Confidence 45578887766544332333333344566799999998854 3567777542111222221 3222222233444 78
Q ss_pred cEEEEcCCCCCceEEe
Q 042303 129 GFIVVGGRGAFSYEYI 144 (519)
Q Consensus 129 ~V~viGG~~~~~~E~y 144 (519)
+.++.|+.++ .+.+|
T Consensus 115 ~~l~~~~~d~-~i~~~ 129 (313)
T 3odt_A 115 GVVISGSWDK-TAKVW 129 (313)
T ss_dssp TEEEEEETTS-EEEEE
T ss_pred CEEEEEeCCC-CEEEE
Confidence 8888888763 44454
No 83
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.20 E-value=0.11 Score=51.51 Aligned_cols=190 Identities=16% Similarity=0.168 Sum_probs=98.1
Q ss_pred ccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC--CccccceEEEcCCCcEEEEcCCCCCceEEe-CC
Q 042303 70 WCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA--EPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PP 146 (519)
Q Consensus 70 ~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~--~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~ 146 (519)
.|.....-+||+++++||.+ ..++++|.. +.+|..... +. ....-.+++.-+||+.++.|+.++ ++.+| ..
T Consensus 18 ~v~~l~~sp~g~~las~~~D---~~i~iw~~~-~~~~~~~~~-~~~~h~~~v~~~~~sp~g~~l~s~s~D~-~v~iw~~~ 91 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGD---RRIRIWGTE-GDSWICKSV-LSEGHQRTVRKVAWSPCGNYLASASFDA-TTCIWKKN 91 (345)
T ss_dssp CEEEEEECTTSSCEEEEETT---SCEEEEEEE-TTEEEEEEE-ECSSCSSCEEEEEECTTSSEEEEEETTS-CEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEcCC---CeEEEEEcC-CCcceeeee-eccccCCcEEEEEECCCCCEEEEEECCC-cEEEEEcc
Confidence 34445566799999999854 568889877 666643211 21 222233445557999999998764 45566 33
Q ss_pred CCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCC
Q 042303 147 QGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGGS 224 (519)
Q Consensus 147 ~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~ 224 (519)
.+.+. ....+.. +. .... .+...++|++++.|+.+ ..+||..+..-...+..+.+ .
T Consensus 92 ~~~~~----~~~~~~~-------h~---------~~v~-~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-h 149 (345)
T 3fm0_A 92 QDDFE----CVTTLEG-------HE---------NEVK-SVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS-H 149 (345)
T ss_dssp CC-EE----EEEEECC-------CS---------SCEE-EEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC-C
T ss_pred CCCeE----EEEEccC-------CC---------CCce-EEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC-c
Confidence 32110 1111110 00 0000 12234689999988754 56788766432111221211 1
Q ss_pred CccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCC--ccee
Q 042303 225 RNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMP--TRRV 301 (519)
Q Consensus 225 r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~ 301 (519)
.. .-.++.+ ..++++++.|+.+ ..+..+|.. ...|... .+. ....
T Consensus 150 ~~---~v~~~~~----------~p~~~~l~s~s~d-----------------~~i~~w~~~--~~~~~~~~~~~~h~~~v 197 (345)
T 3fm0_A 150 TQ---DVKHVVW----------HPSQELLASASYD-----------------DTVKLYREE--EDDWVCCATLEGHESTV 197 (345)
T ss_dssp CS---CEEEEEE----------CSSSSCEEEEETT-----------------SCEEEEEEE--TTEEEEEEEECCCSSCE
T ss_pred CC---CeEEEEE----------CCCCCEEEEEeCC-----------------CcEEEEEec--CCCEEEEEEecCCCCce
Confidence 10 0011111 1267788888765 134567765 4556543 222 1122
Q ss_pred eceeEEecCCcEEEEcCcC
Q 042303 302 MGDMTILPTGDVLLVNGAQ 320 (519)
Q Consensus 302 ~~~~vvLpdG~V~viGG~~ 320 (519)
. +...-|||+.++.|+.+
T Consensus 198 ~-~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 198 W-SLAFDPSGQRLASCSDD 215 (345)
T ss_dssp E-EEEECTTSSEEEEEETT
T ss_pred E-EEEECCCCCEEEEEeCC
Confidence 2 22356899999998864
No 84
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.09 E-value=1.3 Score=44.00 Aligned_cols=243 Identities=14% Similarity=0.183 Sum_probs=113.1
Q ss_pred eEEEEECCCCc--EEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCC--ccccCCC-CCCCccccceEE
Q 042303 49 HSVLFDIETAK--LKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTC--DWIEYPT-ALAEPRWYSTQV 123 (519)
Q Consensus 49 ~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~--~W~~~~~-~m~~~R~y~s~~ 123 (519)
....||++|++ |+.- ..... ....++.+++|++... ...+..||+. +. .|..... .....+...+.+
T Consensus 114 ~l~a~d~~tG~~~W~~~--~~~~~-~~~p~~~~~~v~v~~~----~g~l~~~d~~-tG~~~W~~~~~~~~~~~~~~~~~~ 185 (376)
T 3q7m_A 114 QVYALNTSDGTVAWQTK--VAGEA-LSRPVVSDGLVLIHTS----NGQLQALNEA-DGAVKWTVNLDMPSLSLRGESAPT 185 (376)
T ss_dssp EEEEEETTTCCEEEEEE--CSSCC-CSCCEEETTEEEEECT----TSEEEEEETT-TCCEEEEEECCC-----CCCCCCE
T ss_pred EEEEEECCCCCEEEEEe--CCCce-EcCCEEECCEEEEEcC----CCeEEEEECC-CCcEEEEEeCCCCceeecCCCCcE
Confidence 45678998886 4331 11111 2233455787777543 2378899986 44 4764322 011112223333
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCC--CCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeC
Q 042303 124 TLPDGGFIVVGGRGAFSYEYI-PPQGQ--SNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSN 200 (519)
Q Consensus 124 ~L~dG~V~viGG~~~~~~E~y-P~~~~--w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg 200 (519)
. .+|.||+ |..+ ..+-.+ +.+++ |.. ........... +.+ ..... ..++.+|.||+.+.
T Consensus 186 ~-~~~~v~~-g~~~-g~l~~~d~~tG~~~w~~---~~~~~~~~~~~-------~~~--~~~~~---~p~~~~~~v~~~~~ 247 (376)
T 3q7m_A 186 T-AFGAAVV-GGDN-GRVSAVLMEQGQMIWQQ---RISQATGSTEI-------DRL--SDVDT---TPVVVNGVVFALAY 247 (376)
T ss_dssp E-ETTEEEE-CCTT-TEEEEEETTTCCEEEEE---ECCC--------------------CCCC---CCEEETTEEEEECT
T ss_pred E-ECCEEEE-EcCC-CEEEEEECCCCcEEEEE---ecccCCCCccc-------ccc--cccCC---CcEEECCEEEEEec
Confidence 3 3777766 4332 234445 55542 310 00000000000 000 00000 12345788888763
Q ss_pred -CceEEeeCCCCe--EEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCC
Q 042303 201 -NRSILFDPKANR--VIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQ 277 (519)
Q Consensus 201 -~~~~~yDp~t~~--w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~ 277 (519)
....++|+++++ |.. + .. . ..... ..+++||+.... .
T Consensus 248 ~g~l~~~d~~tG~~~w~~--~-~~----~----~~~~~-----------~~~~~l~~~~~~------------------g 287 (376)
T 3q7m_A 248 NGNLTALDLRSGQIMWKR--E-LG----S----VNDFI-----------VDGNRIYLVDQN------------------D 287 (376)
T ss_dssp TSCEEEEETTTCCEEEEE--C-CC----C----EEEEE-----------EETTEEEEEETT------------------C
T ss_pred CcEEEEEECCCCcEEeec--c-CC----C----CCCce-----------EECCEEEEEcCC------------------C
Confidence 356789998765 432 1 11 0 01111 127788876432 1
Q ss_pred ceEEEEecCCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCc
Q 042303 278 DCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTI 357 (519)
Q Consensus 278 s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~ 357 (519)
.+.++|+......|+...+... .... .++.+|+||+.... | .+.+||+++.+ ..|+.-.. .
T Consensus 288 ~l~~~d~~tG~~~w~~~~~~~~-~~~~-~~~~~~~l~v~~~~--g------------~l~~~d~~tG~-~~~~~~~~--~ 348 (376)
T 3q7m_A 288 RVMALTIDGGVTLWTQSDLLHR-LLTS-PVLYNGNLVVGDSE--G------------YLHWINVEDGR-FVAQQKVD--S 348 (376)
T ss_dssp CEEEEETTTCCEEEEECTTTTS-CCCC-CEEETTEEEEECTT--S------------EEEEEETTTCC-EEEEEECC--T
T ss_pred eEEEEECCCCcEEEeecccCCC-cccC-CEEECCEEEEEeCC--C------------eEEEEECCCCc-EEEEEecC--C
Confidence 3456787644556876533322 2223 23458888875321 1 35789998872 13543211 1
Q ss_pred CCccceeeeEcCCCcEEEecC
Q 042303 358 PRMYHSVSVLLPDGKVLIAGS 378 (519)
Q Consensus 358 ~R~yhs~a~LlpdG~V~v~GG 378 (519)
.....+.+ ..+|+||+...
T Consensus 349 ~~~~~~~~--~~~~~l~v~~~ 367 (376)
T 3q7m_A 349 SGFQTEPV--AADGKLLIQAK 367 (376)
T ss_dssp TCBCSCCE--EETTEEEEEBT
T ss_pred CcceeCCE--EECCEEEEEeC
Confidence 11222222 34999988754
No 85
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.07 E-value=0.19 Score=49.43 Aligned_cols=90 Identities=11% Similarity=0.046 Sum_probs=48.4
Q ss_pred eEEEEECCCCcEEECccC----CCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCC-----ccccCCCCCC-Cccc
Q 042303 49 HSVLFDIETAKLKPLKIQ----TDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTC-----DWIEYPTALA-EPRW 118 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~-----~W~~~~~~m~-~~R~ 118 (519)
...+||..++.++.+..+ +........+-++|+++++|+.+ ..+++||.. .. ++..... +. ....
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~-~~~~~~~~~~~~~~-~~~h~~~ 109 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKE-ESADRTFEMDLLAI-IEGHENE 109 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC--------CCCEEEEE-EC----C
T ss_pred EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcc-cCcCccccceeEEE-EcCCCCc
Confidence 345788887655443322 21112223455789999998864 468888864 21 1211111 21 1112
Q ss_pred cceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 119 YSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 119 y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
-.+++.-+||+.++.|+.+ .++.+|
T Consensus 110 V~~v~~sp~g~~las~s~D-~~v~iw 134 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRD-KSVWIW 134 (330)
T ss_dssp EEEEEECTTSCEEEEEETT-SCEEEE
T ss_pred EEEEEECCCCCEEEEEeCC-CEEEEE
Confidence 2234445789999998876 356676
No 86
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.03 E-value=0.98 Score=42.10 Aligned_cols=131 Identities=13% Similarity=0.073 Sum_probs=64.0
Q ss_pred EEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEE
Q 042303 52 LFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFI 131 (519)
Q Consensus 52 ~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~ 131 (519)
.||+.+.+.............+.++..+|++++... ...+..||+. +....... ......-...+.-++|++|
T Consensus 50 ~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~----~~~i~~~d~~-~~~~~~~~--~~~~~~p~~i~~~~~g~l~ 122 (270)
T 1rwi_B 50 KLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF----NNRVVTLAAG-SNNQTVLP--FDGLNYPEGLAVDTQGAVY 122 (270)
T ss_dssp EECC-----EECCCCSCCSCCCEEECTTCCEEEEET----TTEEEEECTT-CSCCEECC--CCSCSSEEEEEECTTCCEE
T ss_pred EecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC----CCEEEEEeCC-CceEeeee--cCCcCCCcceEECCCCCEE
Confidence 566666554443222111222344556899988865 2478899987 44433222 1111222344555689999
Q ss_pred EEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEE-EeeCCcEEEEeC--CceEEee
Q 042303 132 VVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVN-LVTDGNLFIFSN--NRSILFD 207 (519)
Q Consensus 132 viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~-~~~~G~Ifv~Gg--~~~~~yD 207 (519)
+....+ ..+..| +.+... ..... . ....|... .-++|+||+... ....+||
T Consensus 123 v~~~~~-~~i~~~~~~~~~~----~~~~~--~------------------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 123 VADRGN-NRVVKLAAGSKTQ----TVLPF--T------------------GLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp EEEGGG-TEEEEECTTCCSC----EECCC--C------------------SCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred EEECCC-CEEEEEECCCcee----Eeecc--c------------------cCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 875432 245555 322211 00000 0 00012233 346899998753 3567899
Q ss_pred CCCCeEE
Q 042303 208 PKANRVI 214 (519)
Q Consensus 208 p~t~~w~ 214 (519)
+.+....
T Consensus 178 ~~~~~~~ 184 (270)
T 1rwi_B 178 AESNNQV 184 (270)
T ss_dssp TTTCCEE
T ss_pred cCCCceE
Confidence 9887643
No 87
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.00 E-value=1.3 Score=43.45 Aligned_cols=26 Identities=15% Similarity=0.322 Sum_probs=17.0
Q ss_pred EEeeCCc-EEEEe--CCceEEeeCCCCeE
Q 042303 188 NLVTDGN-LFIFS--NNRSILFDPKANRV 213 (519)
Q Consensus 188 ~~~~~G~-Ifv~G--g~~~~~yDp~t~~w 213 (519)
...+||+ +|+.. .....+||..+++.
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 3457897 66655 23467888877765
No 88
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.96 E-value=1.1 Score=43.11 Aligned_cols=60 Identities=13% Similarity=0.167 Sum_probs=37.1
Q ss_pred CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcCC--CcEEEEcCCCCCceEEe
Q 042303 79 DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLPD--GGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 79 dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~d--G~V~viGG~~~~~~E~y 144 (519)
+|+++++|+.+ ..++++|.. +.+|..... +.. ...-.+++..++ |++++.|+.+ .++.+|
T Consensus 66 ~g~~l~s~s~D---~~v~iWd~~-~~~~~~~~~-~~~h~~~v~~v~~~p~~~g~~l~s~s~d-~~v~~w 128 (297)
T 2pm7_B 66 FGTILASCSYD---GKVMIWKEE-NGRWSQIAV-HAVHSASVNSVQWAPHEYGPMLLVASSD-GKVSVV 128 (297)
T ss_dssp GCSEEEEEETT---TEEEEEEBS-SSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETT-SEEEEE
T ss_pred cCCEEEEEcCC---CEEEEEEcC-CCceEEEEE-eecCCCceeEEEeCcCCCCcEEEEEECC-CcEEEE
Confidence 48899998854 579999987 666654432 221 112223334444 7888888876 356666
No 89
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.90 E-value=0.78 Score=44.06 Aligned_cols=69 Identities=10% Similarity=-0.058 Sum_probs=39.4
Q ss_pred eccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEc-C--CCcEEEEcCCCCCceEEe-CCCCCC
Q 042303 76 LTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTL-P--DGGFIVVGGRGAFSYEYI-PPQGQS 150 (519)
Q Consensus 76 ~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L-~--dG~V~viGG~~~~~~E~y-P~~~~w 150 (519)
+-+||+.+++|+.+ ..+++||.. ..+...+. .+......-..+.. + +|++++.|+.+ .++.+| ..+++|
T Consensus 17 ~s~~g~~las~s~D---~~v~iw~~~-~~~~~~~~-~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 17 MDYYGKRMATCSSD---KTIKIFEVE-GETHKLID-TLTGHEGPVWRVDWAHPKFGTILASCSYD-GKVMIWKEENGRW 89 (297)
T ss_dssp ECTTSSEEEEEETT---SCEEEEEBC-SSCBCCCE-EECCCSSCEEEEEECCGGGCSEEEEEETT-TEEEEEEBSSSCB
T ss_pred ECCCCCEEEEEeCC---CEEEEEecC-CCCcEEEE-EEccccCCeEEEEecCCCcCCEEEEEcCC-CEEEEEEcCCCce
Confidence 44689999999854 568899875 33332222 13221111122222 2 38899988876 467777 555443
No 90
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.90 E-value=0.63 Score=46.29 Aligned_cols=67 Identities=15% Similarity=0.083 Sum_probs=34.8
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCC-C-CCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPT-A-LAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~-~-m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
.+.+|+++++.+.. ..+++||.. +.+-..... . ......-.+++..+||+.++.|+.++ ++.+| ..+
T Consensus 101 ~~s~d~~~l~~s~d----g~v~lWd~~-~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-~v~iwd~~~ 170 (357)
T 4g56_B 101 AWVSEKGILVASDS----GAVELWEIL-EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-SVKVWDLSQ 170 (357)
T ss_dssp EEETTTEEEEEETT----SCEEEC---------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-CEEEEETTT
T ss_pred EEcCCCCEEEEECC----CEEEEeecc-ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCC
Confidence 45678988776542 368888876 433211111 0 11122233556668999999998764 56666 443
No 91
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.86 E-value=1 Score=43.56 Aligned_cols=90 Identities=11% Similarity=0.024 Sum_probs=48.7
Q ss_pred EEEEECCCCcEEECcc--CCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEE--c
Q 042303 50 SVLFDIETAKLKPLKI--QTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVT--L 125 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~--L 125 (519)
..+||..+........ .+..........+||+.+++|+.+ ..+++||.. +.+..... .....-.+++. -
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~-~~~~~~~~---~~~~~v~~~~~~~~ 138 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLS-SNQAIQIA---QHDAPVKTIHWIKA 138 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEEE---ECSSCEEEEEEEEC
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC---CcEEEEEcC-CCCceeec---cccCceEEEEEEeC
Confidence 4578877633222111 112222223456689988888753 478899977 44433221 11111222333 4
Q ss_pred CCCcEEEEcCCCCCceEEe-CCC
Q 042303 126 PDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 126 ~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
++++.++.|+.++ .+.+| ..+
T Consensus 139 ~~~~~l~~~~~dg-~i~vwd~~~ 160 (368)
T 3mmy_A 139 PNYSCVMTGSWDK-TLKFWDTRS 160 (368)
T ss_dssp SSCEEEEEEETTS-EEEEECSSC
T ss_pred CCCCEEEEccCCC-cEEEEECCC
Confidence 6889899888763 56677 444
No 92
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.85 E-value=1.6 Score=43.05 Aligned_cols=75 Identities=17% Similarity=0.322 Sum_probs=44.1
Q ss_pred CCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCC--CcCCccceee
Q 042303 288 NPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPT--TIPRMYHSVS 365 (519)
Q Consensus 288 ~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~--~~~R~yhs~a 365 (519)
...|+....+..+.....+..++|++|+++.. | .+.+.+ ++.|.+|+.+..- +.....++++
T Consensus 193 G~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~--G------------~~~~s~--~D~G~tW~~~~~~~~~~~~~~~~v~ 256 (327)
T 2xbg_A 193 QTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNG--G------------KIAFSD--PDNSENWGELLSPLRRNSVGFLDLA 256 (327)
T ss_dssp CSSCEEEECCSSSCEEEEEECTTSCEEEEETT--T------------EEEEEE--TTEEEEECCCBCTTSSCCSCEEEEE
T ss_pred CCceeECCCCCCCccceeEECCCCCEEEEeCC--c------------eEEEec--CCCCCeeEeccCCcccCCcceEEEE
Confidence 46898874344455556566789999987642 1 112222 3456799876532 2222234433
Q ss_pred eEcCCCcEEEecCC
Q 042303 366 VLLPDGKVLIAGSN 379 (519)
Q Consensus 366 ~LlpdG~V~v~GG~ 379 (519)
..+++++|++|++
T Consensus 257 -~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 257 -YRTPNEVWLAGGA 269 (327)
T ss_dssp -ESSSSCEEEEEST
T ss_pred -ecCCCEEEEEeCC
Confidence 3578999998864
No 93
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.84 E-value=0.64 Score=47.18 Aligned_cols=111 Identities=8% Similarity=0.062 Sum_probs=62.1
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNK 152 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~ 152 (519)
.+-+++.++++|+.+ ..+++||.. +.+.... +.. ...-.+++.-++|++++.|+.++ ++.+| ..+.+
T Consensus 115 ~~~p~~~~l~s~s~D---g~i~vwd~~-~~~~~~~---l~~h~~~V~~v~~~~~~~~l~sgs~D~-~i~iwd~~~~~--- 183 (410)
T 1vyh_C 115 IFHPVFSVMVSASED---ATIKVWDYE-TGDFERT---LKGHTDSVQDISFDHSGKLLASCSADM-TIKLWDFQGFE--- 183 (410)
T ss_dssp EECSSSSEEEEEESS---SCEEEEETT-TCCCCEE---ECCCSSCEEEEEECTTSSEEEEEETTS-CCCEEETTSSC---
T ss_pred EEcCCCCEEEEEeCC---CeEEEEECC-CCcEEEE---EeccCCcEEEEEEcCCCCEEEEEeCCC-eEEEEeCCCCc---
Confidence 345688999998854 478899976 4433211 221 12223445557899999998764 45566 43221
Q ss_pred cccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCeEEEE
Q 042303 153 QSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANRVIRE 216 (519)
Q Consensus 153 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~ 216 (519)
....+.. + ..... .+...++|+.++.|+.+ ..+||..++...+.
T Consensus 184 ---~~~~~~~-------h---------~~~V~-~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~ 229 (410)
T 1vyh_C 184 ---CIRTMHG-------H---------DHNVS-SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 229 (410)
T ss_dssp ---EEECCCC-------C---------SSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ---eeEEEcC-------C---------CCCEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 1111100 0 00000 12334688888888764 56799988775443
No 94
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.82 E-value=0.53 Score=47.70 Aligned_cols=87 Identities=10% Similarity=0.094 Sum_probs=50.9
Q ss_pred eEEEEECCCCcEEECccCCC--cccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcC
Q 042303 49 HSVLFDIETAKLKPLKIQTD--TWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLP 126 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~--~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~ 126 (519)
...+||..|++...+-.... ..-.+..+.+||+.+++|+.+ ..++++|.. +.+-.. . +........+.. .
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~-~~~~~~--~-~~~h~~~v~~~s-~ 197 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ-QQKRLR--N-MTSHSARVGSLS-W 197 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT-TTEEEE--E-ECCCSSCEEEEE-E
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcC-CCcEEE--E-EeCCCCceEEEe-e
Confidence 35679999998765433321 122234456799999999854 468899976 443221 1 222222222233 4
Q ss_pred CCcEEEEcCCCCCceEEe
Q 042303 127 DGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 127 dG~V~viGG~~~~~~E~y 144 (519)
|+++++.|+.+. .+..+
T Consensus 198 ~~~~l~sgs~d~-~i~~~ 214 (420)
T 4gga_A 198 NSYILSSGSRSG-HIHHH 214 (420)
T ss_dssp ETTEEEEEETTS-EEEEE
T ss_pred CCCEEEEEeCCC-ceeEe
Confidence 889999888764 34444
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.81 E-value=0.95 Score=44.31 Aligned_cols=111 Identities=8% Similarity=0.012 Sum_probs=61.4
Q ss_pred eecc--CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCC
Q 042303 75 GLTV--DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSN 151 (519)
Q Consensus 75 ~~l~--dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~ 151 (519)
...+ +|+.+++|+.+ ..+++||.. +.+-..... ........+++.-+||++++.|+.++ .+.+| ..+.+-.
T Consensus 132 ~~~~~~~~~~l~s~s~d---g~i~~wd~~-~~~~~~~~~-~~~~~~i~~~~~~pdg~~lasg~~dg-~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 132 YGHNEVNTEYFIWADNR---GTIGFQSYE-DDSQYIVHS-AKSDVEYSSGVLHKDSLLLALYSPDG-ILDVYNLSSPDQA 205 (343)
T ss_dssp ECCC---CCEEEEEETT---CCEEEEESS-SSCEEEEEC-CCSSCCCCEEEECTTSCEEEEECTTS-CEEEEESSCTTSC
T ss_pred EcCCCCCCCEEEEEeCC---CcEEEEECC-CCcEEEEEe-cCCCCceEEEEECCCCCEEEEEcCCC-EEEEEECCCCCCC
Confidence 3455 88899988854 468899976 444322211 12222344566678999999998764 57777 5543211
Q ss_pred CcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-ceEEeeCCCCe
Q 042303 152 KQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-RSILFDPKANR 212 (519)
Q Consensus 152 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-~~~~yDp~t~~ 212 (519)
...+ .. .+. .... .+...++|+.++.|+. ...+||..+.+
T Consensus 206 ----~~~~-~~-~h~--------------~~v~-~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 206 ----SSRF-PV-DEE--------------AKIK-EVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp ----CEEC-CC-CTT--------------SCEE-EEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred ----ccEE-ec-cCC--------------CCEE-EEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 0011 00 000 0000 1223468888887764 46678988765
No 96
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.71 E-value=0.12 Score=51.10 Aligned_cols=142 Identities=15% Similarity=0.153 Sum_probs=77.0
Q ss_pred eeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccc
Q 042303 190 VTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAE 267 (519)
Q Consensus 190 ~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~ 267 (519)
.++|+.++.|+.+ ..+||..++.+. .+..+.+ ... + -.++.+ ..++++++.|+.+
T Consensus 70 sp~g~~l~s~s~D~~v~iw~~~~~~~~-~~~~~~~-h~~-~--v~~v~~----------sp~~~~l~s~s~D-------- 126 (345)
T 3fm0_A 70 SPCGNYLASASFDATTCIWKKNQDDFE-CVTTLEG-HEN-E--VKSVAW----------APSGNLLATCSRD-------- 126 (345)
T ss_dssp CTTSSEEEEEETTSCEEEEEECCC-EE-EEEEECC-CSS-C--EEEEEE----------CTTSSEEEEEETT--------
T ss_pred CCCCCEEEEEECCCcEEEEEccCCCeE-EEEEccC-CCC-C--ceEEEE----------eCCCCEEEEEECC--------
Confidence 4689998888754 567888776543 2222221 110 0 011111 1268888888765
Q ss_pred cccccccCCCceEEEEecCCCCceEec-cCC--cceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCC
Q 042303 268 DKKQFWPALQDCGRIRITEPNPVWKKE-MMP--TRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEK 344 (519)
Q Consensus 268 ~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 344 (519)
.++..+|+.. ...+... .+. ..... .....|+|++++.|+.+. .+.+||..++
T Consensus 127 ---------~~v~iwd~~~-~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~-------------~i~~w~~~~~ 182 (345)
T 3fm0_A 127 ---------KSVWVWEVDE-EDEYECVSVLNSHTQDVK-HVVWHPSQELLASASYDD-------------TVKLYREEED 182 (345)
T ss_dssp ---------SCEEEEEECT-TSCEEEEEEECCCCSCEE-EEEECSSSSCEEEEETTS-------------CEEEEEEETT
T ss_pred ---------CeEEEEECCC-CCCeEEEEEecCcCCCeE-EEEECCCCCEEEEEeCCC-------------cEEEEEecCC
Confidence 2345677653 2233322 111 11121 224568999999987641 4689998888
Q ss_pred CcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 345 RHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 345 ~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
+|..+..+.--...-.....-|||+.++.|+...
T Consensus 183 ---~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 183 ---DWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp ---EEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ---CEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 7764332221111112233568999999998654
No 97
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=95.71 E-value=0.49 Score=48.50 Aligned_cols=73 Identities=12% Similarity=0.170 Sum_probs=40.1
Q ss_pred eceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEe-CCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCC
Q 042303 302 MGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYK-TKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 302 ~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~Yd-P~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 380 (519)
.|.+++.-||+||..|-...|.-|..... ....+..-+ |... +...++ .-.+|++|+ .-||+||.-|-+.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~-~~~~p~~v~~~~~~---~v~~va----~G~~hs~al-t~~G~v~~wG~n~ 357 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNL-DQCSPVQVRFPDDQ---KVVQVS----CGWRHTLAV-TERNNVFAWGRGT 357 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSS-CEEEEEEECCGGGC---CEEEEE----ECSSEEEEE-ETTSCEEEEECCT
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCC-CCccCEEEeccCCC---cEEEEE----eCCCeEEEE-eCCCCEEEecCCC
Confidence 45667778999999996554433221111 111121111 1112 343332 234677654 5899999999877
Q ss_pred CCC
Q 042303 381 HDG 383 (519)
Q Consensus 381 ~~~ 383 (519)
++.
T Consensus 358 ~Gq 360 (406)
T 4d9s_A 358 NGQ 360 (406)
T ss_dssp TST
T ss_pred CCc
Confidence 654
No 98
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.61 E-value=2.2 Score=45.78 Aligned_cols=84 Identities=12% Similarity=0.024 Sum_probs=44.4
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~d 127 (519)
...+||+.+.+-...-.-+...-....+-+||+++++|+.+ ..++++|.. +.+...... +. ....-.+++--+|
T Consensus 40 ~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d---~~v~lWd~~-~~~~~~~~~-~~~~~~~v~~v~fs~d 114 (611)
T 1nr0_A 40 SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH---GNVRIWDTT-QTTHILKTT-IPVFSGPVKDISWDSE 114 (611)
T ss_dssp EEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEESS-STTCCEEEE-EECSSSCEEEEEECTT
T ss_pred EEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCC---CCEEEeECC-CCcceeeEe-ecccCCceEEEEECCC
Confidence 34577776543221111111111223456899999999864 579999975 332211110 11 1122234555578
Q ss_pred CcEEEEcCCC
Q 042303 128 GGFIVVGGRG 137 (519)
Q Consensus 128 G~V~viGG~~ 137 (519)
|+.++.+|.+
T Consensus 115 g~~l~~~~~~ 124 (611)
T 1nr0_A 115 SKRIAAVGEG 124 (611)
T ss_dssp SCEEEEEECC
T ss_pred CCEEEEEECC
Confidence 9988888764
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.57 E-value=1.7 Score=41.77 Aligned_cols=87 Identities=6% Similarity=-0.068 Sum_probs=46.8
Q ss_pred EEEEECCCCc----EEECccCCCcccCCCeeccCCe-EEEecCCCCCCceEEEEeC-CCCCccccCCCCCCCccccceEE
Q 042303 50 SVLFDIETAK----LKPLKIQTDTWCSSGGLTVDGH-LVGTGGYQGGANTVRYLWT-CDTCDWIEYPTALAEPRWYSTQV 123 (519)
Q Consensus 50 ~~~yDp~t~~----w~~l~~~~~~~c~~~~~l~dG~-llv~GG~~~g~~~v~~ydp-~~~~~W~~~~~~m~~~R~y~s~~ 123 (519)
..+||..+++ ...+.. +..........++++ .+++|+.+ ..+.+||. . +.+...+.. ......-.+.+
T Consensus 35 v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d---g~i~~wd~~~-~~~~~~~~~-~~~~~~v~~l~ 108 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGTVQ---GEILKVDLIG-SPSFQALTN-NEANLGICRIC 108 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEEEETT---SCEEEECSSS-SSSEEECBS-CCCCSCEEEEE
T ss_pred EEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEEEcCC---CeEEEEEecc-CCceEeccc-cCCCCceEEEE
Confidence 4577776665 332221 122222234566899 88888753 47889998 6 444332221 10222222344
Q ss_pred EcCCCcEEEEcCCCCCceEEe
Q 042303 124 TLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 124 ~L~dG~V~viGG~~~~~~E~y 144 (519)
..+ ++.++.|+.++ .+.+|
T Consensus 109 ~~~-~~~l~s~~~d~-~i~iw 127 (342)
T 1yfq_A 109 KYG-DDKLIAASWDG-LIEVI 127 (342)
T ss_dssp EET-TTEEEEEETTS-EEEEE
T ss_pred eCC-CCEEEEEcCCC-eEEEE
Confidence 455 78888887663 45555
No 100
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.57 E-value=2.3 Score=46.26 Aligned_cols=63 Identities=14% Similarity=0.094 Sum_probs=39.3
Q ss_pred CeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 74 GGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 74 ~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
..+.+||+++++|+.+ ..++++|.. +..-.. . +. ....-.+++..+||+.++.|+.+. ++.+|
T Consensus 436 v~~s~~g~~l~sgs~D---g~v~vwd~~-~~~~~~--~-~~~h~~~v~~~~~s~~~~~l~s~s~D~-~i~iw 499 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWD---GELRLWDLA-AGVSTR--R-FVGHTKDVLSVAFSLDNRQIVSASRDR-TIKLW 499 (694)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT-TTEEEE--E-EECCSSCEEEEEECTTSSCEEEEETTS-CEEEE
T ss_pred EEECCCCCEEEEEeCC---CcEEEEECC-CCccee--E-EeCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Confidence 3456799999999864 578999976 432211 1 21 112223445557899999888763 56666
No 101
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.57 E-value=2.4 Score=43.06 Aligned_cols=103 Identities=10% Similarity=0.142 Sum_probs=58.3
Q ss_pred EeeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCccccc
Q 042303 189 LVTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYA 266 (519)
Q Consensus 189 ~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 266 (519)
..++|+.++.|+.+ ..+||..+.+-...+. + .. .....+ ..+++.+++|+.+
T Consensus 318 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~---~-h~----~~v~~~-----------~~~~~~l~s~s~d------- 371 (464)
T 3v7d_B 318 YDHERKRCISASMDTTIRIWDLENGELMYTLQ---G-HT----ALVGLL-----------RLSDKFLVSAAAD------- 371 (464)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEEC---C-CS----SCEEEE-----------EECSSEEEEEETT-------
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe---C-CC----CcEEEE-----------EEcCCEEEEEeCC-------
Confidence 34688888888754 6789998887544332 1 11 111111 1256778888765
Q ss_pred ccccccccCCCceEEEEecCCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCC
Q 042303 267 EDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEK 344 (519)
Q Consensus 267 ~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 344 (519)
..+..+|+......+... ..........-++|++++.|+ + | .+.+||..++
T Consensus 372 ----------g~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 372 ----------GSIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp ----------SEEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred ----------CcEEEEECCCCceeeeec---CCCCccEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 134567765322222221 111122234568999999886 2 2 4789999887
No 102
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.55 E-value=0.88 Score=45.71 Aligned_cols=137 Identities=12% Similarity=0.030 Sum_probs=70.3
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEE-EecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLV-GTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~ll-v~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~d 127 (519)
...+||+.+.+....-..+........+.+||+.+ +.+.. ...+.+||+. +.+.... +.....-.+++.-+|
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~i~~~d~~-~~~~~~~---~~~~~~~~~~~~~~~ 264 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI---SEDISVIDRK-TKLEIRK---TDKIGLPRGLLLSKD 264 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT---TTEEEEEETT-TTEEEEE---CCCCSEEEEEEECTT
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC---CCcEEEEECC-CCcEEEE---ecCCCCceEEEEcCC
Confidence 45689988876543222222222234556677655 55432 2478999987 5544322 222222334555578
Q ss_pred CcEEEEcCCCC-------CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccce-EEEeeCCc-EEE
Q 042303 128 GGFIVVGGRGA-------FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPF-VNLVTDGN-LFI 197 (519)
Q Consensus 128 G~V~viGG~~~-------~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~-~~~~~~G~-Ifv 197 (519)
|+.+++++... ..+.+| +.+++ ....... . . .+. +...++|+ +|+
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~------~~~~~~~-~----------------~--~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEK------LIDTIGP-P----------------G--NKRHIVSGNTENKIYV 319 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTE------EEEEEEE-E----------------E--CEEEEEECSSTTEEEE
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCc------EEeeccC-C----------------C--CcceEEECCCCCEEEE
Confidence 87777776422 244566 54331 1111100 0 0 011 23346774 777
Q ss_pred EeCC--ceEEeeCCCCeEEEEc
Q 042303 198 FSNN--RSILFDPKANRVIREY 217 (519)
Q Consensus 198 ~Gg~--~~~~yDp~t~~w~~~~ 217 (519)
.+.. ...+||..+.+....+
T Consensus 320 ~~~~~~~v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 320 SDMCCSKIEVYDLKEKKVQKSI 341 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCEEEEEECCCCcEEEEe
Confidence 7553 4678999988755444
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.47 E-value=2.5 Score=42.76 Aligned_cols=135 Identities=14% Similarity=0.108 Sum_probs=69.1
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCc
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGG 129 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~ 129 (519)
..+||..+.+....-..+.. .-..+..|++++++|+.+ ..+++||.. +.+... .+......-..... ++.
T Consensus 155 i~iwd~~~~~~~~~~~~h~~--~v~~l~~~~~~l~sg~~d---g~i~vwd~~-~~~~~~---~~~~h~~~v~~l~~-~~~ 224 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTG--SVLCLQYDERVIITGSSD---STVRVWDVN-TGEMLN---TLIHHCEAVLHLRF-NNG 224 (435)
T ss_dssp EEEEESSSCCEEEEECCCSS--CEEEEECCSSEEEEEETT---SCEEEEESS-SCCEEE---EECCCCSCEEEEEC-CTT
T ss_pred EEEEeCCCCeEEEEEcCCCC--cEEEEEECCCEEEEEcCC---CeEEEEECC-CCcEEE---EEcCCCCcEEEEEE-cCC
Confidence 45788877765432211111 111222388999998854 468899976 443221 12222222233444 667
Q ss_pred EEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEe
Q 042303 130 FIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILF 206 (519)
Q Consensus 130 V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~y 206 (519)
.++.|+.++ .+.+| ..+..-. .....+.. +-.+...+..+|+.++.|+.+ ..+|
T Consensus 225 ~l~s~s~dg-~i~vwd~~~~~~~---~~~~~~~~-------------------~~~~v~~~~~~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 225 MMVTCSKDR-SIAVWDMASPTDI---TLRRVLVG-------------------HRAAVNVVDFDDKYIVSASGDRTIKVW 281 (435)
T ss_dssp EEEEEETTS-CEEEEECSSSSCC---EEEEEECC-------------------CSSCEEEEEEETTEEEEEETTSEEEEE
T ss_pred EEEEeeCCC-cEEEEeCCCCCCc---eeeeEecC-------------------CCCcEEEEEeCCCEEEEEeCCCeEEEE
Confidence 888887663 56666 4332110 00011100 001122334488888887654 5689
Q ss_pred eCCCCeEEEEc
Q 042303 207 DPKANRVIREY 217 (519)
Q Consensus 207 Dp~t~~w~~~~ 217 (519)
|..+.+-...+
T Consensus 282 d~~~~~~~~~~ 292 (435)
T 1p22_A 282 NTSTCEFVRTL 292 (435)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCcCcEEEEE
Confidence 99887754433
No 104
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.44 E-value=1.1 Score=43.14 Aligned_cols=140 Identities=12% Similarity=0.080 Sum_probs=70.4
Q ss_pred EEEEECCCCcEEECccCCCc-ccCCCeeccCCe-EEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-----ccccceE
Q 042303 50 SVLFDIETAKLKPLKIQTDT-WCSSGGLTVDGH-LVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-----PRWYSTQ 122 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~-~c~~~~~l~dG~-llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-----~R~y~s~ 122 (519)
..+||+.+++....-..... .....++.+||+ +++.+.. ...+.+||+. +.+....-. +.. ...-...
T Consensus 23 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~-t~~~~~~~~-~~~~~~~~~~~~~~~ 97 (349)
T 1jmx_B 23 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLD-TCKNTFHAN-LSSVPGEVGRSMYSF 97 (349)
T ss_dssp EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETT-TTEEEEEEE-SCCSTTEEEECSSCE
T ss_pred EEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCC-CCcEEEEEE-cccccccccccccce
Confidence 45789888876432222221 122345567886 5666532 3578899987 554332111 211 1112344
Q ss_pred EEcCCCcEEEEcCCC-----------CCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccce-EEE
Q 042303 123 VTLPDGGFIVVGGRG-----------AFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPF-VNL 189 (519)
Q Consensus 123 ~~L~dG~V~viGG~~-----------~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~-~~~ 189 (519)
+.-+||+.+++++.+ ...+.+| ..+++-. ....... .+. .+. +..
T Consensus 98 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~-----------------~~~--~~~~~~~ 155 (349)
T 1jmx_B 98 AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA---KPVRTFP-----------------MPR--QVYLMRA 155 (349)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB---CCSEEEE-----------------CCS--SCCCEEE
T ss_pred EECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc---ceeeecc-----------------CCC--cccceeE
Confidence 556789877776632 2345555 4332100 0000000 000 111 224
Q ss_pred eeCCcEEEEeCCceEEeeCCCCeEEEEc
Q 042303 190 VTDGNLFIFSNNRSILFDPKANRVIREY 217 (519)
Q Consensus 190 ~~~G~Ifv~Gg~~~~~yDp~t~~w~~~~ 217 (519)
.+||++|+. +.+..+||..+.+....+
T Consensus 156 s~dg~l~~~-~~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 156 ADDGSLYVA-GPDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp CTTSCEEEE-SSSEEEECTTTCCEEEEE
T ss_pred CCCCcEEEc-cCcEEEEeCCCCceeccc
Confidence 579997774 555888999988765444
No 105
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.43 E-value=2.2 Score=41.70 Aligned_cols=151 Identities=13% Similarity=0.060 Sum_probs=76.8
Q ss_pred eEEEEECCCCcEEECccCCC-cccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCc-c-ccCCCCC-----CCccccc
Q 042303 49 HSVLFDIETAKLKPLKIQTD-TWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCD-W-IEYPTAL-----AEPRWYS 120 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~-W-~~~~~~m-----~~~R~y~ 120 (519)
....||+.+++......... ....+.++.++|+||++... ...+..||+. ... . ..+.... ...-..+
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~---~~~v~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~P 145 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA---LHQVFKLDPH-SKEGPLLILGRSMQPGSDQNHFCQP 145 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT---TTEEEEECTT-CSSCCSEEESBTTBCCCSTTCCSSE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC---CCEEEEEeCC-CCeEEEEEecccCCCCCCccccCCC
Confidence 46689999888754321111 12223455679999998653 3578999986 331 1 1111000 0111123
Q ss_pred -eEEEcC-CCcEEEEcCCCCCceEEeCCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEe-eC-CcEE
Q 042303 121 -TQVTLP-DGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLV-TD-GNLF 196 (519)
Q Consensus 121 -s~~~L~-dG~V~viGG~~~~~~E~yP~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~-~~-G~If 196 (519)
.++.-+ +|++||..+.....+..|...++. ...+-...... .. . ...-.+|...++ ++ |+||
T Consensus 146 ~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~-----~~~~~~~g~~~---~~-~-----~~~~~~p~gia~d~~~g~l~ 211 (329)
T 3fvz_A 146 TDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF-----VTQWGEESSGS---SP-R-----PGQFSVPHSLALVPHLDQLC 211 (329)
T ss_dssp EEEEECTTTCCEEEEECSSCCEEEEECTTSCE-----EEEECEECCSS---SC-C-----TTEESCEEEEEEETTTTEEE
T ss_pred cEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE-----EEEeccCCCCC---CC-C-----CcccCCCcEEEEECCCCEEE
Confidence 344555 799999986433456666322211 00000000000 00 0 001123555554 56 8999
Q ss_pred EEeC--CceEEeeCCCCeEEEEc
Q 042303 197 IFSN--NRSILFDPKANRVIREY 217 (519)
Q Consensus 197 v~Gg--~~~~~yDp~t~~w~~~~ 217 (519)
+... ....+||+.+++..+.+
T Consensus 212 v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 212 VADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EEETTTTEEEEEETTTCCEEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEE
Confidence 9863 45788999977766544
No 106
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.40 E-value=2.7 Score=42.64 Aligned_cols=134 Identities=10% Similarity=0.159 Sum_probs=71.0
Q ss_pred EEeeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccc
Q 042303 188 NLVTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYY 265 (519)
Q Consensus 188 ~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~ 265 (519)
.+.+++++++.|+.+ ..+||..+.+....+. + ... .-.++.+ ..+++.+++|+.+
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~---~-~~~---~v~~~~~----------~~~~~~l~sg~~d------ 331 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS---G-HTD---RIYSTIY----------DHERKRCISASMD------ 331 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEEC---C-CSS---CEEEEEE----------ETTTTEEEEEETT------
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec---C-CCC---CEEEEEE----------cCCCCEEEEEeCC------
Confidence 445788888888754 6789998877544332 1 111 0111211 1267778888765
Q ss_pred cccccccccCCCceEEEEecCCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCC
Q 042303 266 AEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKR 345 (519)
Q Consensus 266 ~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~ 345 (519)
..+..+|+.. .+-.. .+........++. .+++.++.|+.+ | .+.+||..+..
T Consensus 332 -----------g~i~vwd~~~--~~~~~-~~~~h~~~v~~~~-~~~~~l~s~s~d-g------------~v~vwd~~~~~ 383 (464)
T 3v7d_B 332 -----------TTIRIWDLEN--GELMY-TLQGHTALVGLLR-LSDKFLVSAAAD-G------------SIRGWDANDYS 383 (464)
T ss_dssp -----------SCEEEEETTT--TEEEE-EECCCSSCEEEEE-ECSSEEEEEETT-S------------EEEEEETTTCC
T ss_pred -----------CcEEEEECCC--CcEEE-EEeCCCCcEEEEE-EcCCEEEEEeCC-C------------cEEEEECCCCc
Confidence 1345666542 21111 2211111223233 478888888764 1 46899988761
Q ss_pred cceeeecCCCCcCCccceeeeEcCCCcEEEecC
Q 042303 346 HHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGS 378 (519)
Q Consensus 346 g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG 378 (519)
..+..- .... .....+-+||+++++|+
T Consensus 384 -~~~~~~----~~~~-~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 384 -RKFSYH----HTNL-SAITTFYVSDNILVSGS 410 (464)
T ss_dssp -EEEEEE----CTTC-CCEEEEEECSSEEEEEE
T ss_pred -eeeeec----CCCC-ccEEEEEeCCCEEEEec
Confidence 112211 1111 12344568999999987
No 107
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.36 E-value=2.5 Score=42.27 Aligned_cols=87 Identities=14% Similarity=0.137 Sum_probs=47.1
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~d 127 (519)
...+||..+++....-..+.. .-..+..+++++++|+.+ ..+.+||.. ...- .... +. ....-.+.+..+|
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~~~d---g~i~i~d~~-~~~~-~~~~-~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQA--RVGCLSWNRHVLSSGSRS---GAIHHHDVR-IANH-QIGT-LQGHSSEVCGLAWRSD 228 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSS--CEEEEEEETTEEEEEETT---SEEEEEETT-SSSC-EEEE-EECCSSCEEEEEECTT
T ss_pred eEEEEECcCCeEEEEecCCCC--ceEEEEECCCEEEEEcCC---CCEEEEecc-cCcc-eeeE-EcCCCCCeeEEEEcCC
Confidence 456788887764332111111 111223377888888754 578899975 2211 1111 21 1122234555679
Q ss_pred CcEEEEcCCCCCceEEe
Q 042303 128 GGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y 144 (519)
|+.+++|+.++ .+.+|
T Consensus 229 ~~~l~s~~~d~-~v~iw 244 (401)
T 4aez_A 229 GLQLASGGNDN-VVQIW 244 (401)
T ss_dssp SSEEEEEETTS-CEEEE
T ss_pred CCEEEEEeCCC-eEEEc
Confidence 99999998764 56666
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.31 E-value=0.39 Score=53.28 Aligned_cols=90 Identities=13% Similarity=0.158 Sum_probs=52.9
Q ss_pred eEEEEECCCCcEEECccCCCc--ccCCCeeccC--CeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEE
Q 042303 49 HSVLFDIETAKLKPLKIQTDT--WCSSGGLTVD--GHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQV 123 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~--~c~~~~~l~d--G~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~ 123 (519)
...+||..++++..+...... ........++ |+.+++|+.+ ..+.+||.. +.+|..... +.. ...-.+++
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~-~~~~~~~~~-~~~h~~~V~~v~ 106 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE-NGRWSQIAV-HAVHSASVNSVQ 106 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEE-TTEEEEEEE-ECCCSSCEEEEE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---CeEEEEECC-CCccccccc-ccCCCCCeEEEE
Confidence 355788877776665443221 1112233355 8899998864 468888877 666544432 322 22233445
Q ss_pred EcCC--CcEEEEcCCCCCceEEe
Q 042303 124 TLPD--GGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 124 ~L~d--G~V~viGG~~~~~~E~y 144 (519)
..++ |+++++|+.++ .+-+|
T Consensus 107 ~sp~~~~~~l~sgs~dg-~I~vw 128 (753)
T 3jro_A 107 WAPHEYGPLLLVASSDG-KVSVV 128 (753)
T ss_dssp ECCGGGCSEEEEEETTS-EEEEE
T ss_pred ECCCCCCCEEEEEeCCC-cEEEE
Confidence 5567 89999998764 45566
No 109
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.31 E-value=0.3 Score=48.28 Aligned_cols=66 Identities=14% Similarity=0.074 Sum_probs=36.2
Q ss_pred Ceecc-CCeEEEecCCCCCCceEEEEeCCCCCccccCCC----------CCC-CccccceEEEcC-CCcEEEEcCCCCCc
Q 042303 74 GGLTV-DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPT----------ALA-EPRWYSTQVTLP-DGGFIVVGGRGAFS 140 (519)
Q Consensus 74 ~~~l~-dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~----------~m~-~~R~y~s~~~L~-dG~V~viGG~~~~~ 140 (519)
..+.+ +|+++++|+.+ ..+++||.. +.+...... .+. ....-.+++..+ ++.+++.|+.+ ..
T Consensus 49 ~~~s~~~~~~l~~~~~d---g~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-~~ 123 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSD---GVIVLYDLE-NSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD-KT 123 (408)
T ss_dssp EEECTTTCCEEEEEETT---SCEEEEECC-CCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-SE
T ss_pred EEEecCCCCEEEEEcCC---CeEEEEECC-CCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-Ce
Confidence 34556 89999998854 468888876 333221100 000 112223344445 67788888765 35
Q ss_pred eEEe
Q 042303 141 YEYI 144 (519)
Q Consensus 141 ~E~y 144 (519)
+.+|
T Consensus 124 i~iw 127 (408)
T 4a11_B 124 LKVW 127 (408)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5666
No 110
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.28 E-value=0.47 Score=46.20 Aligned_cols=68 Identities=13% Similarity=-0.029 Sum_probs=38.5
Q ss_pred ccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEc-C--CCcEEEEcCCCCCceEEe-CCCCCC
Q 042303 77 TVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTL-P--DGGFIVVGGRGAFSYEYI-PPQGQS 150 (519)
Q Consensus 77 l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L-~--dG~V~viGG~~~~~~E~y-P~~~~w 150 (519)
-+||+.+++|+.+ ..+++||.. +.+...+.. +......-..+.. + +|++++.|+.+ .++.+| ..+++|
T Consensus 22 s~~g~~lasgs~D---~~v~lwd~~-~~~~~~~~~-l~gH~~~V~~v~~~~~~~~~~l~s~s~D-~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 22 DYYGTRLATCSSD---RSVKIFDVR-NGGQILIAD-LRGHEGPVWQVAWAHPMYGNILASCSYD-RKVIIWREENGTW 93 (316)
T ss_dssp CGGGCEEEEEETT---TEEEEEEEE-TTEEEEEEE-EECCSSCEEEEEECCGGGSSCEEEEETT-SCEEEECCSSSCC
T ss_pred cCCCCEEEEEeCC---CeEEEEEec-CCCcEEEEE-EcCCCccEEEEEeCCCCCCCEEEEEECC-CEEEEEECCCCcc
Confidence 4688899998854 578899876 443221211 2211111122332 2 48888888876 457777 555444
No 111
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.16 E-value=2.4 Score=40.79 Aligned_cols=91 Identities=10% Similarity=-0.091 Sum_probs=50.0
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeecc-CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTV-DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLP 126 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~ 126 (519)
...+||..+++-...-..+..........+ +++++++|+.+ ..+++||.. +.+-...-..+. ....-.+++..+
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQ-TDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETT-TTEEEEEECSTTSCSSCEEEEEECT
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEee-cCeEEEEecccccccCceeEEEECC
Confidence 345788877654332111222222334556 88999998753 468899976 443221110012 222233445557
Q ss_pred CCcEEEEcCCCCCceEEe
Q 042303 127 DGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 127 dG~V~viGG~~~~~~E~y 144 (519)
+|+.++.|+.++ .+.+|
T Consensus 172 ~~~~l~~~~~dg-~i~i~ 188 (366)
T 3k26_A 172 LGEKIMSCGMDH-SLKLW 188 (366)
T ss_dssp TSSEEEEEETTS-CEEEE
T ss_pred CCCEEEEecCCC-CEEEE
Confidence 899999998764 45565
No 112
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.16 E-value=5.1 Score=44.41 Aligned_cols=250 Identities=10% Similarity=0.082 Sum_probs=118.5
Q ss_pred EEECCCCcEEECccCC--------CcccCCCeeccCCe-EEEecCCCCCCceEEEEeCCCCCccccCCC---CCCCcccc
Q 042303 52 LFDIETAKLKPLKIQT--------DTWCSSGGLTVDGH-LVGTGGYQGGANTVRYLWTCDTCDWIEYPT---ALAEPRWY 119 (519)
Q Consensus 52 ~yDp~t~~w~~l~~~~--------~~~c~~~~~l~dG~-llv~GG~~~g~~~v~~ydp~~~~~W~~~~~---~m~~~R~y 119 (519)
.||+.+++++...... .....+.....+|+ |++ |... ..+.+||+. +.++..... .+...+ -
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~---~Gl~~~d~~-~~~~~~~~~~~~~l~~~~-v 454 (795)
T 4a2l_A 381 LYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA---GGLSILHRN-SGQVENFNQRNSQLVNEN-V 454 (795)
T ss_dssp EECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT---TEEEEEETT-TCCEEEECTTTSCCSCSC-E
T ss_pred EEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc---CceeEEeCC-CCcEEEeecCCCCcCCCe-e
Confidence 5677777776553211 01111111234687 555 3322 247889987 666654431 122222 2
Q ss_pred ceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEE
Q 042303 120 STQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIF 198 (519)
Q Consensus 120 ~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~ 198 (519)
.+.+.-.+|++++... . ..-+| |.+++|. .......... + .....+ ....-.+|+|++.
T Consensus 455 ~~i~~d~~g~lwigt~-~--Gl~~~~~~~~~~~----~~~~~~~~~~--~----------~~~~i~-~i~~d~~g~lWig 514 (795)
T 4a2l_A 455 YAILPDGEGNLWLGTL-S--ALVRFNPEQRSFT----TIEKEKDGTP--V----------VSKQIT-TLFRDSHKRLWIG 514 (795)
T ss_dssp EEEEECSSSCEEEEES-S--CEEEEETTTTEEE----ECCBCTTCCB--C----------CCCCEE-EEEECTTCCEEEE
T ss_pred EEEEECCCCCEEEEec-C--ceeEEeCCCCeEE----Eccccccccc--c----------CCceEE-EEEECCCCCEEEE
Confidence 2334445688887543 2 34556 7665442 1110000000 0 000011 1223357899887
Q ss_pred eCCceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCc
Q 042303 199 SNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQD 278 (519)
Q Consensus 199 Gg~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s 278 (519)
......+||+.++++ + +...... ...+......++ ...+|+|++.... |
T Consensus 515 t~~Gl~~~~~~~~~~-~-~~~~~~~-~~l~~~~i~~i~---------~d~~g~lWigT~~--G----------------- 563 (795)
T 4a2l_A 515 GEEGLSVFKQEGLDI-Q-KASILPV-SNVTKLFTNCIY---------EASNGIIWVGTRE--G----------------- 563 (795)
T ss_dssp ESSCEEEEEEETTEE-E-ECCCSCS-CGGGGSCEEEEE---------ECTTSCEEEEESS--C-----------------
T ss_pred eCCceEEEeCCCCeE-E-EecCCCC-CCCCCCeeEEEE---------ECCCCCEEEEeCC--C-----------------
Confidence 665577899998886 3 3211000 000000111111 0126777774321 1
Q ss_pred eEEEEecCCCCceEec----cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCC
Q 042303 279 CGRIRITEPNPVWKKE----MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAP 354 (519)
Q Consensus 279 ~~~~d~~~~~~~W~~~----~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~ 354 (519)
..+||+. +.+++.. .++..... +.+.-.+|+|++... .| ..+|||++. ++.....
T Consensus 564 l~~~d~~--~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lWi~t~--~G-------------l~~~~~~~~---~~~~~~~ 622 (795)
T 4a2l_A 564 FYCFNEK--DKQIKRYNTTNGLPNNVVY-GILEDSFGRLWLSTN--RG-------------ISCFNPETE---KFRNFTE 622 (795)
T ss_dssp EEEEETT--TTEEEEECGGGTCSCSCEE-EEEECTTSCEEEEET--TE-------------EEEEETTTT---EEEEECG
T ss_pred ceeECCC--CCcEEEeCCCCCCchhheE-EEEECCCCCEEEEcC--Cc-------------eEEEcCCCC---cEEEcCC
Confidence 2355554 3444331 34443332 223345788888653 12 368999998 7765432
Q ss_pred ---CCcCCccceeeeEcCCCcEEEecCC
Q 042303 355 ---TTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 355 ---~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
++.......+++..+||++|++|.+
T Consensus 623 ~dGl~~~~f~~~~~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 623 SDGLQSNQFNTASYCRTSVGQMYFGGIN 650 (795)
T ss_dssp GGTCSCSCEEEEEEEECTTSCEEEEETT
T ss_pred cCCCccccCccCceeECCCCeEEEecCC
Confidence 3322222234556789999998764
No 113
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.13 E-value=1.2 Score=44.10 Aligned_cols=67 Identities=12% Similarity=0.023 Sum_probs=37.5
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCC-CC-CCccccceEEEcCCCcEEEEcCCCCCceEEe-CCC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPT-AL-AEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~-~m-~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
.+.+|++++ +|+.+ ..+++||.. +++-..... .+ .....-.+++..+||+.++.|+.++ ++.+| ..+
T Consensus 89 ~~s~d~~l~-~~s~d---g~v~lWd~~-~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-~i~iwd~~~ 158 (344)
T 4gqb_B 89 TWVGERGIL-VASDS---GAVELWELD-ENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-CIKVWDLAQ 158 (344)
T ss_dssp EEETTTEEE-EEETT---SEEEEEEEC-TTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTT
T ss_pred EEeCCCeEE-EEECC---CEEEEEecc-CCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCC
Confidence 345677665 45432 478999976 443211110 01 1122234556668999999998764 56677 544
No 114
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.12 E-value=1.1 Score=44.33 Aligned_cols=89 Identities=8% Similarity=-0.057 Sum_probs=45.4
Q ss_pred eEEEEECCCCc-------EEECccCCCcccCCCeeccC----C---eEEEecCCCCCCceEEEEeCCCCCc------ccc
Q 042303 49 HSVLFDIETAK-------LKPLKIQTDTWCSSGGLTVD----G---HLVGTGGYQGGANTVRYLWTCDTCD------WIE 108 (519)
Q Consensus 49 ~~~~yDp~t~~-------w~~l~~~~~~~c~~~~~l~d----G---~llv~GG~~~g~~~v~~ydp~~~~~------W~~ 108 (519)
...+||..+.+ ...+.. +..........++ | +++++|+.+ ..+++||.. +.+ +..
T Consensus 37 ~i~iw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d---g~i~iw~~~-~~~~~~~~~~~~ 111 (397)
T 1sq9_A 37 YLKVWDNKLLDNENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELCLVATTSFS---GDLLFYRIT-REDETKKVIFEK 111 (397)
T ss_dssp EEEEEESBCCTTCCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEEEEEEEETT---SCEEEEEEE-ECTTTCCEEEEE
T ss_pred EEEEEECCCcccccCCCcceEEec-CCCcEEEEEEecccccCCccccEEEEEcCC---CCEEEEEcc-CCccccccccee
Confidence 34567777765 222221 1112222344567 8 899988754 467788865 333 433
Q ss_pred CCCCCCC---ccccceEEEc----CCCcE-EEEcCCCCCceEEe
Q 042303 109 YPTALAE---PRWYSTQVTL----PDGGF-IVVGGRGAFSYEYI 144 (519)
Q Consensus 109 ~~~~m~~---~R~y~s~~~L----~dG~V-~viGG~~~~~~E~y 144 (519)
+.. ... ...-.+++.. ++++. +++|+.++ .+.+|
T Consensus 112 ~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-~i~iw 153 (397)
T 1sq9_A 112 LDL-LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-TTYIW 153 (397)
T ss_dssp ECC-SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-CEEEE
T ss_pred ecc-cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-cEEEE
Confidence 322 110 1222344555 68998 88887764 45555
No 115
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.11 E-value=0.51 Score=50.38 Aligned_cols=91 Identities=7% Similarity=-0.004 Sum_probs=53.2
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeC--CCCCccccCCCCCCCccccceEEEcC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWT--CDTCDWIEYPTALAEPRWYSTQVTLP 126 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp--~~~~~W~~~~~~m~~~R~y~s~~~L~ 126 (519)
...+||..+++....-..... ..+..+.+||+.+.+++.. ..+.+||. . +.+- +. .+....+-.+++.-+
T Consensus 160 ~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~-t~~~--~~-~i~~g~~p~~va~sp 231 (543)
T 1nir_A 160 QIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRD---ARIDMIDLWAK-EPTK--VA-EIKIGIEARSVESSK 231 (543)
T ss_dssp EEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETT---SEEEEEETTSS-SCEE--EE-EEECCSEEEEEEECC
T ss_pred eEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCC---CeEEEEECcCC-CCcE--EE-EEecCCCcceEEeCC
Confidence 456789998876432111111 2334577899877777643 68999998 4 3322 22 244444333445556
Q ss_pred ----CCcEEEEcCCCCCceEEe-CCC
Q 042303 127 ----DGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 127 ----dG~V~viGG~~~~~~E~y-P~~ 147 (519)
||+.++++.....++-+| ..+
T Consensus 232 ~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 232 FKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp STTCTTTEEEEEEEESSEEEEEETTT
T ss_pred CcCCCCCEEEEEEccCCeEEEEeccc
Confidence 898877776554566666 443
No 116
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.09 E-value=2.9 Score=41.30 Aligned_cols=67 Identities=13% Similarity=0.022 Sum_probs=38.1
Q ss_pred eeccCCe-EEEecCCCC-------CCceEEEEeCCCCCccc-cCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 75 GLTVDGH-LVGTGGYQG-------GANTVRYLWTCDTCDWI-EYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 75 ~~l~dG~-llv~GG~~~-------g~~~v~~ydp~~~~~W~-~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
...+||+ ++++|.... ....+++||.. +.+-. ... .+.....-.+++.-+||+.++.|+.+ ..+.+|
T Consensus 19 ~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~-~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d-g~v~vw 94 (416)
T 2pm9_A 19 AWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLL-AADSEKPIA-SLQVDSKFNDLDWSHNNKIIAGALDN-GSLELY 94 (416)
T ss_dssp CBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESS-SGGGCSCSC-CCCCSSCEEEEEECSSSSCEEEEESS-SCEEEE
T ss_pred eeCCCCCCEEEEEecCcccccccCCCCeEEEEEcc-CCCCCcEEE-EEecCCceEEEEECCCCCeEEEEccC-CeEEEe
Confidence 3456776 888884321 12468899976 43321 121 13222223345555789999988765 356677
No 117
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.06 E-value=1.7 Score=43.52 Aligned_cols=91 Identities=20% Similarity=0.114 Sum_probs=52.6
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcC-C
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLP-D 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~-d 127 (519)
...+||..+++....-..+........+.++|+.+++|+.+ ..+++||.. +.+.... +.....-.+++..+ |
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~-~~~~~~~---~~~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVRIWDLR-TGQCSLT---LSIEDGVTTVAVSPGD 218 (393)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEE---EECSSCEEEEEECSTT
T ss_pred eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEEEEECC-CCeeEEE---EEcCCCcEEEEEECCC
Confidence 34578888876543222222222223456789888888754 578999986 4433211 22222223444445 8
Q ss_pred CcEEEEcCCCCCceEEe-CCC
Q 042303 128 GGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y-P~~ 147 (519)
|+.++.|+.++ .+.+| ..+
T Consensus 219 ~~~l~~~s~d~-~v~iwd~~~ 238 (393)
T 1erj_A 219 GKYIAAGSLDR-AVRVWDSET 238 (393)
T ss_dssp CCEEEEEETTS-CEEEEETTT
T ss_pred CCEEEEEcCCC-cEEEEECCC
Confidence 99999988764 56677 544
No 118
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.05 E-value=2.8 Score=41.65 Aligned_cols=58 Identities=16% Similarity=0.209 Sum_probs=36.1
Q ss_pred EEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCccee-eecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 306 TILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRF-QELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 306 vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
..-|||+++++|+.+. ++.+||..+. +- ..+........ .....-|||+.++.|+..+
T Consensus 276 ~~Spdg~~lasgs~D~-------------~V~iwd~~~~---~~~~~~~~gH~~~V--~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 276 DVDMKGELAVLASNDN-------------SIALVKLKDL---SMSKIFKQAHSFAI--TEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EECTTSCEEEEEETTS-------------CEEEEETTTT---EEEEEETTSSSSCE--EEEEECTTSCEEEEEETTS
T ss_pred EECCCCCceEEEcCCC-------------EEEEEECCCC---cEEEEecCcccCCE--EEEEECCCCCEEEEEeCCC
Confidence 3569999999998641 5789998876 32 11111111111 1233569999999998643
No 119
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.99 E-value=0.45 Score=46.13 Aligned_cols=65 Identities=11% Similarity=0.027 Sum_probs=38.9
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcCCCcEEEEcCCCCCceEEe-CCC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
.+.+||+++++|+.+ ..+++||.. +.+-.. . +.. ...-.+++..+||+.++.|+.++ .+.+| ..+
T Consensus 39 ~~s~~~~~l~~~~~d---g~i~vwd~~-~~~~~~--~-~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~ 105 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKD---SSASVWYSL-NGERLG--T-LDGHTGTIWSIDVDCFTKYCVTGSADY-SIKLWDVSN 105 (369)
T ss_dssp EECTTSCEEEEEESS---SCEEEEETT-TCCEEE--E-ECCCSSCEEEEEECTTSSEEEEEETTT-EEEEEETTT
T ss_pred EEcCCCCEEEEEeCC---CEEEEEeCC-Cchhhh--h-hhhcCCcEEEEEEcCCCCEEEEEeCCC-eEEEEECCC
Confidence 345688999988753 468899876 433221 1 221 12223445556899999988763 56666 443
No 120
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.94 E-value=1.2 Score=44.10 Aligned_cols=120 Identities=10% Similarity=0.078 Sum_probs=57.6
Q ss_pred CeeccCCeEEEecCCCCC---CceEEEEeCCCCCc--cccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCC
Q 042303 74 GGLTVDGHLVGTGGYQGG---ANTVRYLWTCDTCD--WIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 74 ~~~l~dG~llv~GG~~~g---~~~v~~ydp~~~~~--W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
..+-+||++|+.|+.... ...+++|+.. +.. .......+...-.-.+++-.+|+++++.+ .+ .++.+| ..+
T Consensus 48 v~fSpDG~~las~s~d~~~~wd~~v~~~~~~-~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s-~d-g~v~lWd~~~ 124 (357)
T 4g56_B 48 VRYRRDGALLLAASSLSSRTWGGSIWVFKDP-EGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS-DS-GAVELWEILE 124 (357)
T ss_dssp EEECSSSCEEEEEECSSSSSCCEEEEEESSC-C---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-TT-SCEEEC----
T ss_pred EEECCCCCEEEEEcCCCCccccCeEEEEECC-CCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-CC-CEEEEeeccc
Confidence 356689999999985422 2367888754 221 11111001111112234455788876644 33 357777 443
Q ss_pred CCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCeEEE
Q 042303 148 GQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANRVIR 215 (519)
Q Consensus 148 ~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~ 215 (519)
++-. ...... .. ++ ..... .+...+||+.++.|+.+ ..+||..+++...
T Consensus 125 ~~~~---~~~~~~-~~-----~h---------~~~V~-~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 125 KESL---LVNKFA-KY-----EH---------DDIVK-TLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK 175 (357)
T ss_dssp -------CCCCEE-EC-----CC---------SSCEE-EEEECSSSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccee---EEEeec-cC-----CC---------CCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 3211 001110 00 00 00000 12335799999988754 6789999887554
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.94 E-value=3.6 Score=41.57 Aligned_cols=239 Identities=14% Similarity=0.144 Sum_probs=114.7
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDG 128 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG 128 (519)
...+||..+++-...-..+.. .-..+..++.++++|+.+ ..+++||.. +.+-.. .+......-..... ++
T Consensus 140 ~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~l~s~~~d---g~i~vwd~~-~~~~~~---~~~~h~~~v~~~~~-~~ 209 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVGHTG--GVWSSQMRDNIIISGSTD---RTLKVWNAE-TGECIH---TLYGHTSTVRCMHL-HE 209 (445)
T ss_dssp CEEEEETTTCCEEEECCCCSS--CEEEEEEETTEEEEEETT---SCEEEEETT-TTEEEE---EECCCSSCEEEEEE-ET
T ss_pred cEEEEECCCCcEEEEEcCCCC--CEEEEEecCCEEEEEeCC---CeEEEEECC-cCcEEE---EECCCCCcEEEEEe-cC
Confidence 345788877764322111111 011122246678887754 468899976 443221 12211212233344 67
Q ss_pred cEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEE
Q 042303 129 GFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SIL 205 (519)
Q Consensus 129 ~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~ 205 (519)
+.+++|+.+ .++.+| ..+++- ...+.. +..+...+..+|+.++.|+.+ ..+
T Consensus 210 ~~l~s~s~d-g~i~~wd~~~~~~------~~~~~~-------------------~~~~v~~~~~~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 210 KRVVSGSRD-ATLRVWDIETGQC------LHVLMG-------------------HVAAVRCVQYDGRRVVSGAYDFMVKV 263 (445)
T ss_dssp TEEEEEETT-SEEEEEESSSCCE------EEEEEC-------------------CSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred CEEEEEeCC-CEEEEEECCCCcE------EEEEcC-------------------CcccEEEEEECCCEEEEEcCCCEEEE
Confidence 788888766 356666 443311 111100 000112333488888887653 668
Q ss_pred eeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEec
Q 042303 206 FDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRIT 285 (519)
Q Consensus 206 yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~ 285 (519)
||..+.+....+. + ... ....+ ..+++.+++|+.+ ..+..+|+.
T Consensus 264 wd~~~~~~~~~~~---~-~~~----~v~~~-----------~~~~~~l~~~~~d-----------------~~i~i~d~~ 307 (445)
T 2ovr_B 264 WDPETETCLHTLQ---G-HTN----RVYSL-----------QFDGIHVVSGSLD-----------------TSIRVWDVE 307 (445)
T ss_dssp EEGGGTEEEEEEC---C-CSS----CEEEE-----------EECSSEEEEEETT-----------------SCEEEEETT
T ss_pred EECCCCcEeEEec---C-CCC----ceEEE-----------EECCCEEEEEeCC-----------------CeEEEEECC
Confidence 9988876543332 1 110 11111 1267777887764 134566765
Q ss_pred CCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceee
Q 042303 286 EPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVS 365 (519)
Q Consensus 286 ~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a 365 (519)
.....++. .... .... .+-++++.+++|+.+ | .+.+||..+.. .-..+.... .. ...+.
T Consensus 308 ~~~~~~~~-~~~~--~~v~-~~~~~~~~l~~~~~d-g------------~i~vwd~~~~~--~~~~~~~~~-~~-~~~v~ 366 (445)
T 2ovr_B 308 TGNCIHTL-TGHQ--SLTS-GMELKDNILVSGNAD-S------------TVKIWDIKTGQ--CLQTLQGPN-KH-QSAVT 366 (445)
T ss_dssp TCCEEEEE-CCCC--SCEE-EEEEETTEEEEEETT-S------------CEEEEETTTCC--EEEEECSTT-SC-SSCEE
T ss_pred CCCEEEEE-cCCc--ccEE-EEEEeCCEEEEEeCC-C------------eEEEEECCCCc--EEEEEccCC-CC-CCCEE
Confidence 21111111 1111 1112 233588888888754 1 46899987761 122221110 00 01122
Q ss_pred eEcCCCcEEEecCCC
Q 042303 366 VLLPDGKVLIAGSNT 380 (519)
Q Consensus 366 ~LlpdG~V~v~GG~~ 380 (519)
.+-.+++.+++|+..
T Consensus 367 ~~~~~~~~l~s~~~d 381 (445)
T 2ovr_B 367 CLQFNKNFVITSSDD 381 (445)
T ss_dssp EEEECSSEEEEEETT
T ss_pred EEEECCCEEEEEeCC
Confidence 233488999988864
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.85 E-value=2 Score=40.60 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=48.0
Q ss_pred eEEEEECCCCcEEECccCC--CcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcC
Q 042303 49 HSVLFDIETAKLKPLKIQT--DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLP 126 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~ 126 (519)
...+||..|++...+-... ..........++|+.+++|+.+ ..++++|.. +.+-...-. -...+ .. +.-.
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D---g~v~iw~~~-~~~~~~~~~-~h~~~--~~-~~~~ 117 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ-QQKRLRNMT-SHSAR--VG-SLSW 117 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEEEE-CCSSC--EE-EEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC---CcEEEeecC-CceeEEEec-Cccce--EE-Eeec
Confidence 3568999998876543222 2222334567899999999864 578899976 443221111 11122 12 2223
Q ss_pred CCcEEEEcCCCC
Q 042303 127 DGGFIVVGGRGA 138 (519)
Q Consensus 127 dG~V~viGG~~~ 138 (519)
++++++.|+.+.
T Consensus 118 ~~~~l~s~~~~~ 129 (318)
T 4ggc_A 118 NSYILSSGSRSG 129 (318)
T ss_dssp ETTEEEEEETTS
T ss_pred CCCEEEEEecCC
Confidence 788888887654
No 123
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.83 E-value=0.63 Score=45.02 Aligned_cols=66 Identities=9% Similarity=0.101 Sum_probs=36.0
Q ss_pred eccCC-eEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCC---CcEEEEcCCCCCceEEe
Q 042303 76 LTVDG-HLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPD---GGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 76 ~l~dG-~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~d---G~V~viGG~~~~~~E~y 144 (519)
+.++| +++++|+...+...+++||.. +.+...... ......-.+++..++ |+.+++|+.++ .+.+|
T Consensus 26 ~~p~~~~l~~~~s~~~~d~~v~iw~~~-~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-~i~iw 95 (357)
T 3i2n_A 26 WVPCSAKFVTMGNFARGTGVIQLYEIQ-HGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGG-NLHIW 95 (357)
T ss_dssp ECTTSSEEEEEEC--CCCEEEEEEEEC-SSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTS-CEEEE
T ss_pred EcCCCceEEEecCccCCCcEEEEEeCC-CCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCC-eEEEE
Confidence 34566 677777653234678899976 554432221 222222233444455 68888888663 46666
No 124
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.82 E-value=0.98 Score=49.66 Aligned_cols=223 Identities=12% Similarity=0.135 Sum_probs=113.9
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNK 152 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~ 152 (519)
..-+||+++++|+.+ ..+.+||.. +.+.... +.. ...-.+.+--+||+.+++|+.+ ..+.+| ..+++.
T Consensus 20 ~~sp~~~~la~~~~~---g~v~iwd~~-~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vw~~~~~~~-- 89 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYS---GRVEIWNYE-TQVEVRS---IQVTETPVRAGKFIARKNWIIVGSDD-FRIRVFNYNTGEK-- 89 (814)
T ss_dssp EECSSSSEEEEEETT---SEEEEEETT-TTEEEEE---EECCSSCEEEEEEEGGGTEEEEEETT-SEEEEEETTTCCE--
T ss_pred EECCCCCEEEEEeCC---CEEEEEECC-CCceEEE---EecCCCcEEEEEEeCCCCEEEEEeCC-CeEEEEECCCCcE--
Confidence 445688888888743 478899976 4433211 221 1112344555799999999875 356667 444321
Q ss_pred cccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCC-eEEEEccCCCCCCCccCC
Q 042303 153 QSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKAN-RVIREYPVLTGGSRNYPA 229 (519)
Q Consensus 153 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~-~w~~~~p~~p~~~r~~~~ 229 (519)
...+.... .... .+...++|+.++.|+.+ ..+||..++ .....+ .+ ....
T Consensus 90 ----~~~~~~~~----------------~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~---~~-~~~~-- 142 (814)
T 3mkq_A 90 ----VVDFEAHP----------------DYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF---EG-HEHF-- 142 (814)
T ss_dssp ----EEEEECCS----------------SCEE-EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE---EC-CSSC--
T ss_pred ----EEEEecCC----------------CCEE-EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE---cC-CCCc--
Confidence 11110000 0000 12234688877777653 568898876 332222 11 1100
Q ss_pred CCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEeccCCcceeeceeEEec
Q 042303 230 SGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILP 309 (519)
Q Consensus 230 ~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLp 309 (519)
-.++.+ .| .+++++++|+.+ ..+..+|+......+.... ...+........|
T Consensus 143 -v~~~~~--~p-------~~~~~l~~~~~d-----------------g~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~ 194 (814)
T 3mkq_A 143 -VMCVAF--NP-------KDPSTFASGCLD-----------------RTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYP 194 (814)
T ss_dssp -EEEEEE--ET-------TEEEEEEEEETT-----------------SEEEEEETTCSSCSEEEEC-CCTTCCCEEEECC
T ss_pred -EEEEEE--Ec-------CCCCEEEEEeCC-----------------CeEEEEECCCCcceeEEec-CCCCCEEEEEEEE
Confidence 011111 10 156778887664 1345667653233333321 1111112223345
Q ss_pred --CCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCccee-eecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 310 --TGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRF-QELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 310 --dG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
||+.+++|+.+ | .+.+||..+. +- ..+.. ....-.....-|||+++++|+..+
T Consensus 195 ~~~~~~l~~~~~d-g------------~i~~~d~~~~---~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 195 LPDKPYMITASDD-L------------TIKIWDYQTK---SCVATLEG---HMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp STTCCEEEEECTT-S------------EEEEEETTTT---EEEEEEEC---CSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCCCEEEEEeCC-C------------EEEEEECCCC---cEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCC
Confidence 99999998764 1 4689998776 32 12211 111123344679999999888643
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.77 E-value=1.8 Score=46.10 Aligned_cols=110 Identities=9% Similarity=0.018 Sum_probs=63.8
Q ss_pred eccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-C--CCCCCCC
Q 042303 76 LTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-P--PQGQSNK 152 (519)
Q Consensus 76 ~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P--~~~~w~~ 152 (519)
+-+++++|+++.. ...+.++|.. +.+-.. .+..+..-++++.-+||+.+.+++.+ .++.+| . .+.+
T Consensus 145 ~~p~~~~~vs~~~---d~~V~v~D~~-t~~~~~---~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~--- 213 (543)
T 1nir_A 145 LDLPNLFSVTLRD---AGQIALVDGD-SKKIVK---VIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPT--- 213 (543)
T ss_dssp CCGGGEEEEEEGG---GTEEEEEETT-TCCEEE---EEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCE---
T ss_pred cCCCCEEEEEEcC---CCeEEEEECC-CceEEE---EEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCCc---
Confidence 5568999998753 3578899987 554322 12222223456666799877777766 677777 5 3321
Q ss_pred cccccccchhccccccCCcccccccccccCccceEE-Eee----CCcEEEEeC---CceEEeeCCCCeEEEEcc
Q 042303 153 QSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVN-LVT----DGNLFIFSN---NRSILFDPKANRVIREYP 218 (519)
Q Consensus 153 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~-~~~----~G~Ifv~Gg---~~~~~yDp~t~~w~~~~p 218 (519)
....+. . ...|+.+ ..+ ||+.+++++ ....+||..+.+..+.++
T Consensus 214 ---~~~~i~-~------------------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 214 ---KVAEIK-I------------------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp ---EEEEEE-C------------------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred ---EEEEEe-c------------------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 111110 0 0123333 346 898766665 346789999887655443
No 126
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.64 E-value=3.9 Score=40.66 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=56.9
Q ss_pred eeCC-cEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCccccc
Q 042303 190 VTDG-NLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYA 266 (519)
Q Consensus 190 ~~~G-~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 266 (519)
.++| ++++.|+.+ ..+||..+++....+.. .. ... .-.++.+ ..+++.+++|+.+
T Consensus 140 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~-~~~---~v~~~~~----------~~~~~~l~~~~~d------- 197 (402)
T 2aq5_A 140 HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP-DV-HPD---TIYSVDW----------SRDGALICTSCRD------- 197 (402)
T ss_dssp CSSBTTEEEEEETTSCEEEEETTTTEEEEEECT-TT-CCS---CEEEEEE----------CTTSSCEEEEETT-------
T ss_pred CcCCCCEEEEEcCCCEEEEEECCCCCccEEEec-CC-CCC---ceEEEEE----------CCCCCEEEEEecC-------
Confidence 4676 688877653 67899998876544410 10 000 0011111 1267778887754
Q ss_pred ccccccccCCCceEEEEecCCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCC
Q 042303 267 EDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEK 344 (519)
Q Consensus 267 ~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~ 344 (519)
..+..+|+.......+.........-...+..+||+++++|..... -..+.+||..+.
T Consensus 198 ----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~----------d~~i~iwd~~~~ 255 (402)
T 2aq5_A 198 ----------KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS----------ERQVALWDTKHL 255 (402)
T ss_dssp ----------SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTC----------CEEEEEEETTBC
T ss_pred ----------CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCC----------CceEEEEcCccc
Confidence 1345667652111111101111111123356789999998832100 015789998775
No 127
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.64 E-value=2.7 Score=40.69 Aligned_cols=136 Identities=16% Similarity=0.173 Sum_probs=69.6
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcC--
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLP-- 126 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~-- 126 (519)
...+||..+++-...-..+........+.+++.++++|+.+ ..+++||.. ...-..+. ....+-.+....+
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~-~~~~~~~~---~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK-GQCLATLL---GHNDWVSQVRVVPNE 160 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT-SCEEEEEC---CCSSCEEEEEECCC-
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC-CCeEEEEe---ccCCcEEEEEEccCC
Confidence 45589998886432211122222223455789999998864 468888875 32211111 1112222333333
Q ss_pred ----CCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC
Q 042303 127 ----DGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN 201 (519)
Q Consensus 127 ----dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~ 201 (519)
++..++.|+.+ ..+.+| ..+.+ ....+. . + ..... .+...++|+.++.|+.
T Consensus 161 ~~~~~~~~l~s~~~d-~~i~~wd~~~~~-----~~~~~~-~-------h---------~~~v~-~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 161 KADDDSVTIISAGND-KMVKAWNLNQFQ-----IEADFI-G-------H---------NSNIN-TLTASPDGTLIASAGK 216 (319)
T ss_dssp -----CCEEEEEETT-SCEEEEETTTTE-----EEEEEC-C-------C---------CSCEE-EEEECTTSSEEEEEET
T ss_pred CCCCCccEEEEEeCC-CEEEEEECCcch-----hheeec-C-------C---------CCcEE-EEEEcCCCCEEEEEeC
Confidence 45577777765 456666 33221 011110 0 0 00000 1234579999998876
Q ss_pred c--eEEeeCCCCeEEE
Q 042303 202 R--SILFDPKANRVIR 215 (519)
Q Consensus 202 ~--~~~yDp~t~~w~~ 215 (519)
+ ..+||..+.+-..
T Consensus 217 dg~i~iwd~~~~~~~~ 232 (319)
T 3frx_A 217 DGEIMLWNLAAKKAMY 232 (319)
T ss_dssp TCEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEE
Confidence 4 5689998877543
No 128
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.60 E-value=3.9 Score=41.39 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=48.7
Q ss_pred EEEEECCCCcEEECccCC--CcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCc-cccceEEEcC
Q 042303 50 SVLFDIETAKLKPLKIQT--DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEP-RWYSTQVTLP 126 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~-R~y~s~~~L~ 126 (519)
..+||.+++....+.... ...+....+.+||+++++|+.+ ..+.++|.. ... +.. +... ..-.+++.-+
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~-~~~---~~~-~~~h~~~v~~v~~~p 260 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMD-GKE---LWN-LRMHKKKVTHVALNP 260 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESS-SCB---CCC-SBCCSSCEEEEEECT
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccC-cce---eEE-EecccceEEeeeecC
Confidence 457898887766544322 2223334566799999999854 468899975 332 221 2221 1222333445
Q ss_pred CCc-EEEEcCCCCCceEEe
Q 042303 127 DGG-FIVVGGRGAFSYEYI 144 (519)
Q Consensus 127 dG~-V~viGG~~~~~~E~y 144 (519)
++. +++.|+.+ .++.+|
T Consensus 261 ~~~~~~~s~s~d-~~v~iw 278 (435)
T 4e54_B 261 CCDWFLATASVD-QTVKIW 278 (435)
T ss_dssp TCSSEEEEEETT-SBCCEE
T ss_pred CCceEEEEecCc-ceeeEE
Confidence 665 67677665 355566
No 129
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.57 E-value=3 Score=38.99 Aligned_cols=131 Identities=13% Similarity=0.030 Sum_probs=65.9
Q ss_pred EEEEECCCCcEEECccC-CCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCC
Q 042303 50 SVLFDIETAKLKPLKIQ-TDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPD 127 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~d 127 (519)
...||+. ++++.+... ......+.+..++|++++.... ...+..||+. .+..... +. ....-.+.+.-++
T Consensus 80 i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~--g~~~~~~--~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITDD--GKIREYE--LPNKGSYPSFITLGSD 151 (299)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--CCEEEEE--CSSTTCCEEEEEECTT
T ss_pred EEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECCC--CCEEEec--CCCCCCCCceEEEcCC
Confidence 4467775 455444321 1112222344568999987532 2468888884 3333221 11 1122234555568
Q ss_pred CcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEE-eeCCcEEEEe--CCce
Q 042303 128 GGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNL-VTDGNLFIFS--NNRS 203 (519)
Q Consensus 128 G~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~-~~~G~Ifv~G--g~~~ 203 (519)
|++|+..-. ...+..| + +++.. ..+.. . ....|.... -++|+||+.. +...
T Consensus 152 g~l~v~~~~-~~~i~~~~~-~g~~~----~~~~~--~-----------------~~~~~~~i~~~~~g~l~v~~~~~~~i 206 (299)
T 2z2n_A 152 NALWFTENQ-NNAIGRITE-SGDIT----EFKIP--T-----------------PASGPVGITKGNDDALWFVEIIGNKI 206 (299)
T ss_dssp SCEEEEETT-TTEEEEECT-TCCEE----EEECS--S-----------------TTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred CCEEEEeCC-CCEEEEEcC-CCcEE----EeeCC--C-----------------CCCcceeEEECCCCCEEEEccCCceE
Confidence 999987532 2345566 5 43221 11110 0 001233333 3579999876 3457
Q ss_pred EEeeCCCCeEE
Q 042303 204 ILFDPKANRVI 214 (519)
Q Consensus 204 ~~yDp~t~~w~ 214 (519)
.+||+ +++..
T Consensus 207 ~~~~~-~g~~~ 216 (299)
T 2z2n_A 207 GRITT-SGEIT 216 (299)
T ss_dssp EEECT-TCCEE
T ss_pred EEECC-CCcEE
Confidence 78999 66654
No 130
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.48 E-value=1.3 Score=43.79 Aligned_cols=28 Identities=14% Similarity=0.339 Sum_probs=19.7
Q ss_pred eeCCcEEEEeCCc-----eEEeeCCCCeEEEEc
Q 042303 190 VTDGNLFIFSNNR-----SILFDPKANRVIREY 217 (519)
Q Consensus 190 ~~~G~Ifv~Gg~~-----~~~yDp~t~~w~~~~ 217 (519)
.++|++++.|+.+ ..+||..+.+-...+
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 4689988888754 457998887654433
No 131
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.32 E-value=3.9 Score=39.30 Aligned_cols=69 Identities=9% Similarity=-0.130 Sum_probs=39.5
Q ss_pred CeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCC---CCceEEe-CCCC
Q 042303 74 GGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRG---AFSYEYI-PPQG 148 (519)
Q Consensus 74 ~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~---~~~~E~y-P~~~ 148 (519)
.+..+||+|++++... ..+.+||+. +.++..... . ....-.+.+.-+||++|+....+ ...+-.| +...
T Consensus 50 ~~~~~~g~l~~~~~~~---~~i~~~d~~-~~~~~~~~~-~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFE---GNIFKINPE-TKEIKRPFV-S-HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp EEECTTSCEEEEETTT---CEEEEECTT-TCCEEEEEE-C-SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred cEECCCCCEEEEECCC---CEEEEEeCC-CCcEEEEee-C-CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 3455789999886532 478999987 666544321 1 11222234444689999876432 1245556 5443
No 132
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.22 E-value=2.2 Score=40.14 Aligned_cols=139 Identities=12% Similarity=0.183 Sum_probs=70.9
Q ss_pred ceEEEe--eCCcEEEEeC---CceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCC
Q 042303 185 PFVNLV--TDGNLFIFSN---NRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAA 259 (519)
Q Consensus 185 p~~~~~--~~G~Ifv~Gg---~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~ 259 (519)
|...++ .+|+||+... ....+||+.... .+.+..- ....| ..+.+ ..+++||++...+
T Consensus 79 p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~-~~~~~~~---~~~~~---~~i~~----------~~~g~l~v~~~~~ 141 (286)
T 1q7f_A 79 PNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQF-VRKFGAT---ILQHP---RGVTV----------DNKGRIIVVECKV 141 (286)
T ss_dssp EEEEEEETTTTEEEEEECGGGCEEEEECTTSCE-EEEECTT---TCSCE---EEEEE----------CTTSCEEEEETTT
T ss_pred ceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcE-EEEecCc---cCCCc---eEEEE----------eCCCCEEEEECCC
Confidence 445555 5899999873 456789965543 3334211 11111 11211 1268898876432
Q ss_pred CCcccccccccccccCCCceEEEEecCCCCceEec----cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccc
Q 042303 260 WDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE----MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALA 335 (519)
Q Consensus 260 ~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~----~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~ 335 (519)
..+.+||+. ....... .+..++ +.++-+||+||+.+... ..
T Consensus 142 -----------------~~i~~~~~~--g~~~~~~~~~~~~~~p~---~i~~~~~g~l~v~~~~~-------------~~ 186 (286)
T 1q7f_A 142 -----------------MRVIIFDQN--GNVLHKFGCSKHLEFPN---GVVVNDKQEIFISDNRA-------------HC 186 (286)
T ss_dssp -----------------TEEEEECTT--SCEEEEEECTTTCSSEE---EEEECSSSEEEEEEGGG-------------TE
T ss_pred -----------------CEEEEEcCC--CCEEEEeCCCCccCCcE---EEEECCCCCEEEEECCC-------------CE
Confidence 134455543 1111111 233333 33456789999976432 14
Q ss_pred cEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCC
Q 042303 336 PALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 336 ~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
+.+||+... ....+..-... .+.....+-+||++||+...
T Consensus 187 i~~~~~~g~---~~~~~~~~g~~-~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 187 VKVFNYEGQ---YLRQIGGEGIT-NYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp EEEEETTCC---EEEEESCTTTS-CSEEEEEECTTCCEEEEECS
T ss_pred EEEEcCCCC---EEEEEccCCcc-CCCcEEEECCCCCEEEEeCC
Confidence 689998665 44443321100 11122335689999999754
No 133
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.18 E-value=4.5 Score=39.36 Aligned_cols=223 Identities=15% Similarity=0.198 Sum_probs=104.6
Q ss_pred eEEEEeCCCCCccccCCC--CCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCC
Q 042303 94 TVRYLWTCDTCDWIEYPT--ALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGH 170 (519)
Q Consensus 94 ~v~~ydp~~~~~W~~~~~--~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~ 170 (519)
.+.++|+. +.+...... .+..+ ...++-++|++||....+ ..+..| +.... . ....+-.. ... |
T Consensus 70 ~i~~~d~~-~g~~~~~~~~~~~~~p---~gia~d~~g~l~v~d~~~-~~v~~~~~~g~~-~---~~~~~~~~-~~~--g- 136 (329)
T 3fvz_A 70 TILVIDPN-NAEILQSSGKNLFYLP---HGLSIDTDGNYWVTDVAL-HQVFKLDPHSKE-G---PLLILGRS-MQP--G- 136 (329)
T ss_dssp CEEEECTT-TCCEEEEECTTTCSSE---EEEEECTTSCEEEEETTT-TEEEEECTTCSS-C---CSEEESBT-TBC--C-
T ss_pred cEEEEECC-CCeEEeccCCCccCCc---eEEEECCCCCEEEEECCC-CEEEEEeCCCCe-E---EEEEeccc-CCC--C-
Confidence 68899987 554432111 12222 245555789999886543 356666 43221 0 00000000 000 0
Q ss_pred cccccccccccCccceEEEe-e-CCcEEEEeC---CceEEeeCCCCeEEEEccCCCC------CCCccCCCCcEEecccc
Q 042303 171 FGTENFYRIENNLYPFVNLV-T-DGNLFIFSN---NRSILFDPKANRVIREYPVLTG------GSRNYPASGMSVLLPIK 239 (519)
Q Consensus 171 ~~~~~~~~~~~~~yp~~~~~-~-~G~Ifv~Gg---~~~~~yDp~t~~w~~~~p~~p~------~~r~~~~~g~av~l~l~ 239 (519)
. ....-.+|..+++ + +|+||+... ....+||+.... ...+..... +...+| .+.++ .
T Consensus 137 --~----~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~-~~~~~~~g~~~~~~~~~~~~p-~gia~--d-- 204 (329)
T 3fvz_A 137 --S----DQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF-VTQWGEESSGSSPRPGQFSVP-HSLAL--V-- 204 (329)
T ss_dssp --C----STTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCE-EEEECEECCSSSCCTTEESCE-EEEEE--E--
T ss_pred --C----CccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE-EEEeccCCCCCCCCCcccCCC-cEEEE--E--
Confidence 0 0001124555554 5 799999874 346789966544 333421110 011122 12221 1
Q ss_pred cccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCC--cceeeceeEEecCCcEEEE
Q 042303 240 LHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMP--TRRVMGDMTILPTGDVLLV 316 (519)
Q Consensus 240 ~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~~vvLpdG~V~vi 316 (519)
...++||++...+ ..+.+||+. +.+.... ..+ ..+.. +...-| |.+|+.
T Consensus 205 -------~~~g~l~v~d~~~-----------------~~I~~~~~~--~G~~~~~~~~~~~~~~~~-~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 205 -------PHLDQLCVADREN-----------------GRIQCFKTD--TKEFVREIKHASFGRNVF-AISYIP-GFLFAV 256 (329)
T ss_dssp -------TTTTEEEEEETTT-----------------TEEEEEETT--TCCEEEEECCTTTTTCEE-EEEEET-TEEEEE
T ss_pred -------CCCCEEEEEECCC-----------------CEEEEEECC--CCcEEEEEeccccCCCcc-eeeecC-CEEEEe
Confidence 1138999986543 245667764 2333322 111 11222 223345 777877
Q ss_pred cCcCCCCCCccCCCCCccccEEEeCCCCCcceee-ecCCCCcCCc-cceeeeEcCCCcEEEecCC
Q 042303 317 NGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQ-ELAPTTIPRM-YHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 317 GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~-yhs~a~LlpdG~V~v~GG~ 379 (519)
.|... .+ ......+.+||+.+. +.. .+.+....-. =++++ +-+||.|||+...
T Consensus 257 ~g~~~-v~-----~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~ia-~~~dG~lyvad~~ 311 (329)
T 3fvz_A 257 NGKPY-FG-----DQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHDIV-ASEDGTVYIGDAH 311 (329)
T ss_dssp ECCCC-TT-----CSCCCCEEEEETTTC---CEEEEECCSSSCCSSEEEEE-ECTTSEEEEEESS
T ss_pred CCCEE-ec-----cCCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeEEE-ECCCCCEEEEECC
Confidence 77532 11 111235789998877 443 2221111111 12444 5799999999765
No 134
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.97 E-value=4.5 Score=39.00 Aligned_cols=186 Identities=10% Similarity=0.032 Sum_probs=97.0
Q ss_pred ceEEEcCCCcEEEEcCCC-CCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEE
Q 042303 120 STQVTLPDGGFIVVGGRG-AFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFI 197 (519)
Q Consensus 120 ~s~~~L~dG~V~viGG~~-~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv 197 (519)
+..+.-+||++|+..|.. ..++..+ +.+++=. ...++ +.+.++..+.+.+++||+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~---~~i~l--------------------~~~~fgeGi~~~g~~lyv 80 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVE---NIHKM--------------------DDSYFGEGLTLLNEKLYQ 80 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEE---EEEEC--------------------CTTCCEEEEEEETTEEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEE---EEEec--------------------CCCcceEEEEEeCCEEEE
Confidence 455555569999998753 3567777 7765311 01111 112233455666779999
Q ss_pred EeC--CceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccC
Q 042303 198 FSN--NRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPA 275 (519)
Q Consensus 198 ~Gg--~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a 275 (519)
..- ....+||+.+.+....++. + .. .|..+. ....++|++-|.
T Consensus 81 ~t~~~~~v~viD~~t~~v~~~i~~---g-~~---~g~glt-----------~Dg~~l~vs~gs----------------- 125 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIKNFTH---Q-MK---DGWGLA-----------TDGKILYGSDGT----------------- 125 (266)
T ss_dssp EETTCSEEEEEETTTTEEEEEEEC---C-SS---SCCEEE-----------ECSSSEEEECSS-----------------
T ss_pred EEecCCEEEEEECCCCcEEEEEEC---C-CC---CeEEEE-----------ECCCEEEEECCC-----------------
Confidence 874 3577899999876555532 1 00 233321 125667776542
Q ss_pred CCceEEEEecCCCCceEec-c---CCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeee
Q 042303 276 LQDCGRIRITEPNPVWKKE-M---MPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQE 351 (519)
Q Consensus 276 ~~s~~~~d~~~~~~~W~~~-~---M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~ 351 (519)
+.+..+|+. +.+-... . .+.+-...+.+...||+||+....+ .++.+-||++.+-..|-.
T Consensus 126 -~~l~viD~~--t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~-------------~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 126 -SILYEIDPH--TFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQT-------------DCIARISAKDGTLLGWIL 189 (266)
T ss_dssp -SEEEEECTT--TCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTS-------------SEEEEEETTTCCEEEEEE
T ss_pred -CeEEEEECC--CCcEEEEEEECCCCcccccceeEEEECCEEEEecCCC-------------CeEEEEECCCCcEEEEEE
Confidence 234456654 2221111 1 1112112223334499999865332 157889999985444444
Q ss_pred cCCCC-------cC--CccceeeeEcCCC-cEEEecCCC
Q 042303 352 LAPTT-------IP--RMYHSVSVLLPDG-KVLIAGSNT 380 (519)
Q Consensus 352 ~~~~~-------~~--R~yhs~a~LlpdG-~V~v~GG~~ 380 (519)
++.+. .+ -.-++.|. -||| ++||+|..-
T Consensus 190 ~~g~~~~~~~~~~~~~~v~nGIa~-~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 190 LPNLRKKLIDEGFRDIDVLNGIAW-DQENKRIFVTGKLW 227 (266)
T ss_dssp CHHHHHHHHHTTCTTCCCEEEEEE-ETTTTEEEEEETTC
T ss_pred CCCcccccccccccccCceEEEEE-cCCCCEEEEECCCC
Confidence 33110 00 01145554 4665 789998764
No 135
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.96 E-value=2.3 Score=44.57 Aligned_cols=68 Identities=6% Similarity=-0.083 Sum_probs=41.2
Q ss_pred ccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCcc--ccCCCCCCCcc-c-cceEEEcC--CCcEEEEcCCCCCceEE
Q 042303 70 WCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDW--IEYPTALAEPR-W-YSTQVTLP--DGGFIVVGGRGAFSYEY 143 (519)
Q Consensus 70 ~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W--~~~~~~m~~~R-~-y~s~~~L~--dG~V~viGG~~~~~~E~ 143 (519)
......+-+||+++++|+. ..+.+||.. +..- .... .+.... . -.+++.-+ ||+.+++|+.++ .+.+
T Consensus 20 ~v~~~~~spdg~~l~~~~~----~~v~v~~~~-~~~~~~~~~~-~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg-~v~v 92 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCG----KSAFVRCLD-DGDSKVPPVV-QFTGHGSSVVTTVKFSPIKGSQYLCSGDESG-KVIV 92 (615)
T ss_dssp CCCCCEEETTTTEEEEEET----TEEEEEECC-SSCCSSCSEE-EECTTTTSCEEEEEECSSTTCCEEEEEETTS-EEEE
T ss_pred ceeEEEECCCCCEEEEecC----CeEEEEECC-CCCCccccce-EEecCCCceEEEEEECcCCCCCEEEEecCCC-EEEE
Confidence 3444567789999988872 478999976 4300 1111 132222 2 23556667 999999998763 4556
Q ss_pred e
Q 042303 144 I 144 (519)
Q Consensus 144 y 144 (519)
|
T Consensus 93 w 93 (615)
T 1pgu_A 93 W 93 (615)
T ss_dssp E
T ss_pred E
Confidence 5
No 136
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.88 E-value=4.8 Score=38.71 Aligned_cols=180 Identities=7% Similarity=0.020 Sum_probs=94.1
Q ss_pred cCCCcEEEEcCCCC-CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeC--
Q 042303 125 LPDGGFIVVGGRGA-FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSN-- 200 (519)
Q Consensus 125 L~dG~V~viGG~~~-~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg-- 200 (519)
+.||.+|+..|..+ .++..+ +++++-. ...++ +...|.......+++||+.-.
T Consensus 50 ~~~~~LyestG~~g~S~v~~vD~~Tgkv~---~~~~l--------------------~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 50 YRNGYFYESTGLNGRSSIRKVDIESGKTL---QQIEL--------------------GKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTTCCEE---EEEEC--------------------CTTCCEEEEEEETTEEEEEESSS
T ss_pred EECCEEEEECCCCCCceEEEEECCCCcEE---EEEec--------------------CCccceeEEEEeCCEEEEEEeeC
Confidence 34899999998765 456677 7765311 01111 112233345566889999873
Q ss_pred CceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceE
Q 042303 201 NRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCG 280 (519)
Q Consensus 201 ~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 280 (519)
....+||+++.+...+++- + ..|-++. ....++|+.-|. +.+.
T Consensus 107 ~~v~v~D~~t~~~~~ti~~-~-------~eG~glt-----------~dg~~L~~SdGs------------------~~i~ 149 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNY-D-------GEGWGLT-----------HNDQYLIMSDGT------------------PVLR 149 (262)
T ss_dssp SEEEEEETTTCCEEEEEEC-S-------SCCCCEE-----------ECSSCEEECCSS------------------SEEE
T ss_pred CEEEEEECccCcEEEEEEC-C-------CCceEEe-----------cCCCEEEEECCC------------------CeEE
Confidence 4578899999886655542 1 1233322 124556665442 2344
Q ss_pred EEEecCCCCceEe-ccC---CcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCC
Q 042303 281 RIRITEPNPVWKK-EMM---PTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTT 356 (519)
Q Consensus 281 ~~d~~~~~~~W~~-~~M---~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~ 356 (519)
.+|+. +.+-.. ... ..+-...+-....||+||+..=.+ ..+.+-||++.+-..|-.++.+.
T Consensus 150 ~iDp~--T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~-------------~~I~vIDp~tG~V~~~Id~~~L~ 214 (262)
T 3nol_A 150 FLDPE--SLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQT-------------NKIVRIDPETGKVTGIIDLNGIL 214 (262)
T ss_dssp EECTT--TCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTS-------------SEEEEECTTTCBEEEEEECTTGG
T ss_pred EEcCC--CCeEEEEEEeccCCccccccceeEEECCEEEEEEccC-------------CeEEEEECCCCcEEEEEECCcCc
Confidence 56654 222111 111 122112222233499999743111 15788999998655555554332
Q ss_pred c------CC--ccceeeeEcCCCcEEEecCC
Q 042303 357 I------PR--MYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 357 ~------~R--~yhs~a~LlpdG~V~v~GG~ 379 (519)
- +. .-.+.|.---..++||+|-+
T Consensus 215 ~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 215 AEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp GGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred cccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 1 11 22455554235778888853
No 137
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=93.88 E-value=4.3 Score=38.07 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=36.3
Q ss_pred cCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 78 VDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 78 ~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
+++..+++|+.+ ..+++||.. +..-...- ......-.+++..++|+.+++|+.++ .+.+|
T Consensus 27 ~~~~~l~s~~~d---g~v~vw~~~-~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~~ 86 (313)
T 3odt_A 27 VDDSKVASVSRD---GTVRLWSKD-DQWLGTVV--YTGQGFLNSVCYDSEKELLLFGGKDT-MINGV 86 (313)
T ss_dssp EETTEEEEEETT---SEEEEEEES-SSEEEEEE--EECSSCEEEEEEETTTTEEEEEETTS-CEEEE
T ss_pred cCCCEEEEEEcC---CcEEEEECC-CCEEEEEe--ecCCccEEEEEECCCCCEEEEecCCC-eEEEE
Confidence 788888888753 478889876 43322111 11122233555667999999998764 34444
No 138
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.73 E-value=5.8 Score=39.09 Aligned_cols=111 Identities=16% Similarity=0.124 Sum_probs=56.9
Q ss_pred CCeeccCCeEEEecCCCCCCceEEEEeCCC-CCccccCCCC-CC----CccccceEEEcCCCcEEEEcCCCCCceEEe-C
Q 042303 73 SGGLTVDGHLVGTGGYQGGANTVRYLWTCD-TCDWIEYPTA-LA----EPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-P 145 (519)
Q Consensus 73 ~~~~l~dG~llv~GG~~~g~~~v~~ydp~~-~~~W~~~~~~-m~----~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P 145 (519)
..-++.+++||+.... ..+.+||+.+ ...|...... .. ......+..+..+|+||+.... ..+-.+ +
T Consensus 47 ~~p~v~~~~v~~~~~~----g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~--g~l~a~d~ 120 (376)
T 3q7m_A 47 LHPALADNVVYAADRA----GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK--AQVYALNT 120 (376)
T ss_dssp CCCEEETTEEEEECTT----SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT--SEEEEEET
T ss_pred eccEEECCEEEEEcCC----CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC--CEEEEEEC
Confidence 3556678888887542 3788999862 3357543210 00 0112223344558888886432 234445 5
Q ss_pred CCCC--CCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-ceEEeeCCCCe--EEE
Q 042303 146 PQGQ--SNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-RSILFDPKANR--VIR 215 (519)
Q Consensus 146 ~~~~--w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-~~~~yDp~t~~--w~~ 215 (519)
.+++ |. .+..... . ...++.+|+||+.... ....||+++++ |..
T Consensus 121 ~tG~~~W~-----~~~~~~~--------------------~-~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~ 169 (376)
T 3q7m_A 121 SDGTVAWQ-----TKVAGEA--------------------L-SRPVVSDGLVLIHTSNGQLQALNEADGAVKWTV 169 (376)
T ss_dssp TTCCEEEE-----EECSSCC--------------------C-SCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEE-----EeCCCce--------------------E-cCCEEECCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 5553 31 1110000 0 0123457888876543 36789998775 653
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.71 E-value=4.2 Score=37.44 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=50.7
Q ss_pred eeEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCC-CccccCCCCCCCccccceEEEcC
Q 042303 48 AHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDT-CDWIEYPTALAEPRWYSTQVTLP 126 (519)
Q Consensus 48 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~-~~W~~~~~~m~~~R~y~s~~~L~ 126 (519)
....+||+.+++.+.+... ..........+||+.+++++ ...+.++|.. + .+...+.. ........+.+.-+
T Consensus 22 ~~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~----~~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNS----EGLLYRLSLA-GDPSPEKVDT-GFATICNNDHGISP 94 (297)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEE----TTEEEEEESS-SCCSCEECCC-TTCCCBCSCCEECT
T ss_pred eeEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEc----CCeEEEEeCC-CCCCceEecc-ccccccccceEECC
Confidence 3456899999887765432 22233345678999888875 2478999987 5 55544332 22112233455567
Q ss_pred CCcEEEEcCC
Q 042303 127 DGGFIVVGGR 136 (519)
Q Consensus 127 dG~V~viGG~ 136 (519)
||+.++.++.
T Consensus 95 dg~~l~~~~~ 104 (297)
T 2ojh_A 95 DGALYAISDK 104 (297)
T ss_dssp TSSEEEEEEC
T ss_pred CCCEEEEEEe
Confidence 9988888774
No 140
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=93.66 E-value=4.2 Score=39.22 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=39.4
Q ss_pred CeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 74 GGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 74 ~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
..+.+||+.+++|+.+ ..+++||.. +.+-.. .+.. ...-.+++.-++++.++.|+.++ ++.+|
T Consensus 71 ~~~s~dg~~l~s~s~D---~~v~~wd~~-~~~~~~---~~~~h~~~v~~~~~~~~~~~l~s~s~D~-~i~vw 134 (319)
T 3frx_A 71 CTLTADGAYALSASWD---KTLRLWDVA-TGETYQ---RFVGHKSDVMSVDIDKKASMIISGSRDK-TIKVW 134 (319)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT-TTEEEE---EEECCSSCEEEEEECTTSCEEEEEETTS-CEEEE
T ss_pred EEECCCCCEEEEEeCC---CEEEEEECC-CCCeeE---EEccCCCcEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 3456799999999864 579999986 443211 1211 11123444557899999988764 56666
No 141
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.63 E-value=1.2 Score=42.97 Aligned_cols=88 Identities=14% Similarity=0.149 Sum_probs=47.8
Q ss_pred eEEEEECCCCcE-EECccC----CCcccCCCeeccC----CeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-Cccc
Q 042303 49 HSVLFDIETAKL-KPLKIQ----TDTWCSSGGLTVD----GHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRW 118 (519)
Q Consensus 49 ~~~~yDp~t~~w-~~l~~~----~~~~c~~~~~l~d----G~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~ 118 (519)
...+||..+++. ..+... +..........++ |+++++|+.+ ..+.+||.. +.+-. .. +. ....
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---g~i~v~d~~-~~~~~--~~-~~~~~~~ 117 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR---GIIRIINPI-TMQCI--KH-YVGHGNA 117 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT---CEEEEECTT-TCCEE--EE-EESCCSC
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC---CEEEEEEch-hceEe--ee-ecCCCCc
Confidence 456788776543 222211 1111222334455 7899998754 478899976 43321 11 22 1222
Q ss_pred cceEEEcC-CCcEEEEcCCCCCceEEe
Q 042303 119 YSTQVTLP-DGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 119 y~s~~~L~-dG~V~viGG~~~~~~E~y 144 (519)
-.+.+..+ ++++++.|+.++ .+.+|
T Consensus 118 i~~~~~~~~~~~~l~s~~~dg-~i~iw 143 (366)
T 3k26_A 118 INELKFHPRDPNLLLSVSKDH-ALRLW 143 (366)
T ss_dssp EEEEEECSSCTTEEEEEETTS-CEEEE
T ss_pred EEEEEECCCCCCEEEEEeCCC-eEEEE
Confidence 23444556 889999988764 46666
No 142
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.50 E-value=6.2 Score=38.68 Aligned_cols=88 Identities=10% Similarity=0.106 Sum_probs=51.5
Q ss_pred eEEEEECCCCcEEECccCC--CcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcC
Q 042303 49 HSVLFDIETAKLKPLKIQT--DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLP 126 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~ 126 (519)
...+||..++....+.... ........+.++++.+++|+.+ ..+.+||.. ...-..+. .....-.+++..+
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~-~~~~~~~~---~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLD-GHEIFKEK---LHKAKVTHAEFNP 214 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETT-SCEEEEEE---CSSSCEEEEEECS
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECC-CCEEEEec---cCCCcEEEEEECC
Confidence 3457888876665554322 1222234556789999998754 578899975 33222211 1122234555667
Q ss_pred CCc-EEEEcCCCCCceEEe
Q 042303 127 DGG-FIVVGGRGAFSYEYI 144 (519)
Q Consensus 127 dG~-V~viGG~~~~~~E~y 144 (519)
+++ +++.|+.+ ..+.+|
T Consensus 215 ~~~~~l~s~~~d-~~i~iw 232 (383)
T 3ei3_B 215 RCDWLMATSSVD-ATVKLW 232 (383)
T ss_dssp SCTTEEEEEETT-SEEEEE
T ss_pred CCCCEEEEEeCC-CEEEEE
Confidence 888 88888876 356676
No 143
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.09 E-value=1.8 Score=41.98 Aligned_cols=90 Identities=11% Similarity=0.121 Sum_probs=48.1
Q ss_pred eEEEEECCCCcEEECccCC--CcccCCCeecc--CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEE
Q 042303 49 HSVLFDIETAKLKPLKIQT--DTWCSSGGLTV--DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQV 123 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~--dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~ 123 (519)
...+||..+++...+..+. ...-......+ +|+++++|+.+ ..++++|.. +.+|..... +.. ...-.+++
T Consensus 36 ~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D---~~v~iWd~~-~~~~~~~~~-~~~h~~~V~~v~ 110 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD---RKVIIWREE-NGTWEKSHE-HAGHDSSVNSVC 110 (316)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT---SCEEEECCS-SSCCCEEEE-ECCCSSCCCEEE
T ss_pred eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC---CEEEEEECC-CCcceEEEE-ccCCCCceEEEE
Confidence 3457888776543332221 11000111222 47888888754 578999987 666644321 221 11223344
Q ss_pred EcCC--CcEEEEcCCCCCceEEe
Q 042303 124 TLPD--GGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 124 ~L~d--G~V~viGG~~~~~~E~y 144 (519)
.-++ |++++.|+.++ ++.+|
T Consensus 111 ~~p~~~g~~lasgs~D~-~i~lw 132 (316)
T 3bg1_A 111 WAPHDYGLILACGSSDG-AISLL 132 (316)
T ss_dssp ECCTTTCSCEEEECSSS-CEEEE
T ss_pred ECCCCCCcEEEEEcCCC-CEEEE
Confidence 4455 78889888764 45555
No 144
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.07 E-value=8.4 Score=39.00 Aligned_cols=64 Identities=8% Similarity=-0.059 Sum_probs=34.7
Q ss_pred eeccCCeEE-EecCCCCCCceEEEEeCCCCCccccCCCCCC---CccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 75 GLTVDGHLV-GTGGYQGGANTVRYLWTCDTCDWIEYPTALA---EPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 75 ~~l~dG~ll-v~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~---~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
.+.+||+.| ++|+.+ ..+++||.. ..+...... +. .+..-.+++.-+||+.+++|+.++ .+..|
T Consensus 109 ~~s~d~~~l~~~~~~d---g~v~iwd~~-~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~~g-~v~~~ 176 (450)
T 2vdu_B 109 RLTSDESRLIACADSD---KSLLVFDVD-KTSKNVLKL-RKRFCFSKRPNAISIAEDDTTVIIADKFG-DVYSI 176 (450)
T ss_dssp EECTTSSEEEEEEGGG---TEEEEEEEC-SSSSSCEEE-EEEEECSSCEEEEEECTTSSEEEEEETTS-EEEEE
T ss_pred EEcCCCCEEEEEECCC---CeEEEEECc-CCCCceeee-eecccCCCCceEEEEcCCCCEEEEEeCCC-cEEEE
Confidence 456788875 777643 468888864 212222111 21 112223445557899999987643 34444
No 145
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.92 E-value=6.5 Score=37.34 Aligned_cols=64 Identities=17% Similarity=0.138 Sum_probs=36.3
Q ss_pred CeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 74 GGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 74 ~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
..+.+||+.+++|+.+ ..+++++.. ........ .............++++.++.|+.++ .+.+|
T Consensus 92 ~~~s~dg~~l~s~~~d---~~i~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~l~s~s~d~-~~~~~ 155 (340)
T 4aow_A 92 VVISSDGQFALSGSWD---GTLRLWDLT-TGTTTRRF--VGHTKDVLSVAFSSDNRQIVSGSRDK-TIKLW 155 (340)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT-TTEEEEEE--ECCSSCEEEEEECTTSSCEEEEETTS-CEEEE
T ss_pred EEECCCCCEEEEEccc---ccceEEeec-ccceeeee--cCCCCceeEEEEeecCccceeecCCC-eEEEE
Confidence 3455799999998864 467777765 33222111 11122223344556788888887664 34444
No 146
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.92 E-value=7.2 Score=42.18 Aligned_cols=139 Identities=14% Similarity=0.154 Sum_probs=71.1
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDG 128 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG 128 (519)
...+||..+++-...-..+........+.+||+.+++|+.+ ..++++|....+.+...........+-.+++..+++
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 45578888775432211122222223456789989998754 578889865222222111101122223344444555
Q ss_pred --cEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--e
Q 042303 129 --GFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--S 203 (519)
Q Consensus 129 --~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~ 203 (519)
..++.|+.+ .++.+| ....+ ....+.. |. .... .+...++|++++.|+.+ .
T Consensus 530 ~~~~l~s~s~d-~~v~vwd~~~~~------~~~~~~~-------h~---------~~v~-~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 530 LQPTIVSASWD-KTVKVWNLSNCK------LRSTLAG-------HT---------GYVS-TVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp SSCEEEEEETT-SCEEEEETTTCC------EEEEECC-------CS---------SCEE-EEEECTTSSEEEEEETTSBC
T ss_pred CcceEEEEeCC-CeEEEEECCCCc------EEEEEcC-------CC---------CCEE-EEEEeCCCCEEEEEeCCCeE
Confidence 467777665 457777 43321 1111100 00 0000 12345799999998754 6
Q ss_pred EEeeCCCCeEE
Q 042303 204 ILFDPKANRVI 214 (519)
Q Consensus 204 ~~yDp~t~~w~ 214 (519)
.+||..+.+-.
T Consensus 586 ~iwd~~~~~~~ 596 (694)
T 3dm0_A 586 LLWDLAEGKKL 596 (694)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCceE
Confidence 78999888743
No 147
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.43 E-value=7.6 Score=36.88 Aligned_cols=119 Identities=13% Similarity=0.103 Sum_probs=65.5
Q ss_pred cccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCC
Q 042303 69 TWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 69 ~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
.|..+- .+.+++||+..|.. |.++++.+|+. +.+-..... +...-...+.+.. ++++|++...+ ..+-+| +.+
T Consensus 21 ~ftqGL-~~~~~~LyestG~~-g~S~v~~vD~~-tgkv~~~~~-l~~~~fgeGi~~~-~~~ly~ltw~~-~~v~v~D~~t 94 (243)
T 3mbr_X 21 AFTEGL-FYLRGHLYESTGET-GRSSVRKVDLE-TGRILQRAE-VPPPYFGAGIVAW-RDRLIQLTWRN-HEGFVYDLAT 94 (243)
T ss_dssp CCEEEE-EEETTEEEEEECCT-TSCEEEEEETT-TCCEEEEEE-CCTTCCEEEEEEE-TTEEEEEESSS-SEEEEEETTT
T ss_pred cccccE-EEECCEEEEECCCC-CCceEEEEECC-CCCEEEEEe-CCCCcceeEEEEe-CCEEEEEEeeC-CEEEEEECCc
Confidence 344433 34568999998853 56789999998 665443222 4332222344444 88999986443 445566 554
Q ss_pred CCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-ceEEeeCCCCeEEEEcc
Q 042303 148 GQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-RSILFDPKANRVIREYP 218 (519)
Q Consensus 148 ~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-~~~~yDp~t~~w~~~~p 218 (519)
-+-. ...+. . ..++..+.-++++|+.=|. ....+||.+.+..+.++
T Consensus 95 l~~~---~ti~~--~--------------------~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 95 LTPR---ARFRY--P--------------------GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp TEEE---EEEEC--S--------------------SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred CcEE---EEEeC--C--------------------CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 3110 01111 0 0122333334566666443 35678999988665553
No 148
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.29 E-value=3.8 Score=41.09 Aligned_cols=65 Identities=8% Similarity=0.053 Sum_probs=38.6
Q ss_pred Ceecc-CCeEEEecCCCCCCceEEEEeCCCC---Cc-cccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 74 GGLTV-DGHLVGTGGYQGGANTVRYLWTCDT---CD-WIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 74 ~~~l~-dG~llv~GG~~~g~~~v~~ydp~~~---~~-W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
..+.+ ||+++++|+.+ ..+++||.. + .. +.... .+.....-.+++..++++.++.|+.++ ++.+|
T Consensus 69 ~~~s~~~~~~l~s~s~d---g~v~vwd~~-~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s~dg-~i~vw 138 (437)
T 3gre_A 69 SAVSPGETPYLITGSDQ---GVIKIWNLK-EIIVGEVYSSSL-TYDCSSTVTQITMIPNFDAFAVSSKDG-QIIVL 138 (437)
T ss_dssp EEEECSSSCEEEEEETT---SEEEEEEHH-HHHTTCCCSCSE-EEECSSCEEEEEECTTSSEEEEEETTS-EEEEE
T ss_pred EEECCCCCCEEEEecCC---ceEEEeECc-ccccCcccceee-eccCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Confidence 34667 89999999854 578899865 2 11 11110 012222334555667899999998764 44444
No 149
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.26 E-value=5.2 Score=40.32 Aligned_cols=63 Identities=16% Similarity=0.110 Sum_probs=38.1
Q ss_pred eccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCC
Q 042303 76 LTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 76 ~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
+-.||+.+++|+.+ ..+++||.. +.+-.. .+......-.+... |++.+++|+.++ ++.+| ..+
T Consensus 139 ~~~d~~~l~~g~~d---g~i~iwd~~-~~~~~~---~~~~h~~~v~~l~~-~~~~l~sg~~dg-~i~vwd~~~ 202 (435)
T 1p22_A 139 LQYDDQKIVSGLRD---NTIKIWDKN-TLECKR---ILTGHTGSVLCLQY-DERVIITGSSDS-TVRVWDVNT 202 (435)
T ss_dssp EECCSSEEEEEESS---SCEEEEESS-SCCEEE---EECCCSSCEEEEEC-CSSEEEEEETTS-CEEEEESSS
T ss_pred EEECCCEEEEEeCC---CeEEEEeCC-CCeEEE---EEcCCCCcEEEEEE-CCCEEEEEcCCC-eEEEEECCC
Confidence 34488999998754 478899976 433221 12222222334444 899999998764 56666 443
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.68 E-value=9.1 Score=36.16 Aligned_cols=52 Identities=13% Similarity=0.040 Sum_probs=29.1
Q ss_pred EEEEECCCCcEEECccCCCc--ccCCCeeccCCe-EEEecCCCCCCceEEEEeCCCCCc
Q 042303 50 SVLFDIETAKLKPLKIQTDT--WCSSGGLTVDGH-LVGTGGYQGGANTVRYLWTCDTCD 105 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~--~c~~~~~l~dG~-llv~GG~~~g~~~v~~ydp~~~~~ 105 (519)
..+||+.+++....-..... .....++.+||+ +++.+.. ...+.++|.. +.+
T Consensus 13 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~-~~~ 67 (337)
T 1pby_B 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLV-TGE 67 (337)
T ss_dssp EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETT-TCC
T ss_pred EEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECC-CCC
Confidence 45678777765432222221 233455667884 5666542 3578899986 444
No 151
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.33 E-value=10 Score=35.98 Aligned_cols=26 Identities=19% Similarity=0.415 Sum_probs=19.5
Q ss_pred EeeCCcEEEEeCCc--eEEeeCCCCeEE
Q 042303 189 LVTDGNLFIFSNNR--SILFDPKANRVI 214 (519)
Q Consensus 189 ~~~~G~Ifv~Gg~~--~~~yDp~t~~w~ 214 (519)
..++|++++.|+.+ ..+||..+.+-.
T Consensus 223 ~s~~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 223 VSPDGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp ECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEEeccCcee
Confidence 34789999988764 567899887644
No 152
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.24 E-value=14 Score=37.34 Aligned_cols=59 Identities=19% Similarity=0.272 Sum_probs=38.3
Q ss_pred EEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 306 TILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 306 vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
..-|||+.+++++...+ ...+.+||.++. +...+.... . ......-|||+.++.++...
T Consensus 317 ~~spdG~~l~~~~~~~g----------~~~i~~~d~~~~---~~~~l~~~~---~-~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 317 DVSSDGKFMVMVSSNGG----------QQHIAKQDLATG---GVQVLSSTF---L-DETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp EECTTSSEEEEEEECSS----------CEEEEEEETTTC---CEEECCCSS---S-CEEEEECTTSSEEEEEEEET
T ss_pred EECCCCCEEEEEECcCC----------ceEEEEEECCCC---CEEEecCCC---C-cCCeEEcCCCCEEEEEEcCC
Confidence 45699998887765321 135789999988 666554332 2 22344579999888877543
No 153
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=91.20 E-value=11 Score=36.39 Aligned_cols=62 Identities=13% Similarity=0.096 Sum_probs=38.8
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
.+.++++++++|+.+ ..++++|.. +.+... . +. ....-.+++.-+||+.++.||.++ ++.+|
T Consensus 83 ~~~~~~~~l~s~s~D---~~v~lwd~~-~~~~~~--~-~~~h~~~v~~v~~sp~~~~l~s~~~d~-~i~~w 145 (343)
T 2xzm_R 83 ALSQENCFAISSSWD---KTLRLWDLR-TGTTYK--R-FVGHQSEVYSVAFSPDNRQILSAGAER-EIKLW 145 (343)
T ss_dssp EECSSTTEEEEEETT---SEEEEEETT-SSCEEE--E-EECCCSCEEEEEECSSTTEEEEEETTS-CEEEE
T ss_pred EECCCCCEEEEEcCC---CcEEEEECC-CCcEEE--E-EcCCCCcEEEEEECCCCCEEEEEcCCC-EEEEE
Confidence 445789999998854 579999986 443221 1 21 112223455567999999988764 45555
No 154
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.16 E-value=13 Score=37.08 Aligned_cols=101 Identities=14% Similarity=0.193 Sum_probs=58.0
Q ss_pred CeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCcc-ccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCccccc
Q 042303 80 GHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPR-WYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYL 157 (519)
Q Consensus 80 G~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R-~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~ 157 (519)
+.+|.+|- .++|+++|.. +.+....-. +.... +-.+++--+||+.+++|+.+ .++.+| ..+++ ..
T Consensus 116 ~n~lAvgl----d~tV~lWd~~-tg~~~~~~~-~~~~~~~V~sv~fspdg~~lasgs~D-g~v~iWd~~~~~------~~ 182 (420)
T 4gga_A 116 GNVLAVAL----DNSVYLWSAS-SGDILQLLQ-MEQPGEYISSVAWIKEGNYLAVGTSS-AEVQLWDVQQQK------RL 182 (420)
T ss_dssp TSEEEEEE----TTEEEEEETT-TCCEEEEEE-CCSTTCCEEEEEECTTSSEEEEEETT-SCEEEEETTTTE------EE
T ss_pred CCEEEEEe----CCEEEEEECC-CCCEEEEEE-ecCCCCcEEEEEECCCCCEEEEEECC-CeEEEEEcCCCc------EE
Confidence 45677763 2589999988 666554332 43322 22345556799999999876 457777 54431 11
Q ss_pred ccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCe
Q 042303 158 PLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANR 212 (519)
Q Consensus 158 p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~ 212 (519)
..+.. + --....+..++++++.|+.+ ..++|.....
T Consensus 183 ~~~~~-------h------------~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 183 RNMTS-------H------------SARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp EEECC-------C------------SSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EEEeC-------C------------CCceEEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 11100 0 00123455689999888765 4567766543
No 155
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.96 E-value=2 Score=41.45 Aligned_cols=64 Identities=11% Similarity=0.015 Sum_probs=37.1
Q ss_pred eeccC---CeEEEecCCCCCCceEEEEeCCCCCccccCCCCCC-CccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 75 GLTVD---GHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALA-EPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 75 ~~l~d---G~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~-~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
.+.++ |+++++|+.+ ..+++||.. +........ +. ....-.+++..+||+.++.|+.+ ..+.+|
T Consensus 46 ~~~~~~~~g~~l~~~~~d---g~i~iw~~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d-g~v~iw 113 (368)
T 3mmy_A 46 SFSPPTLPGNFLIAGSWA---NDVRCWEVQ-DSGQTIPKA-QQMHTGPVLDVCWSDDGSKVFTASCD-KTAKMW 113 (368)
T ss_dssp EECCTTSSSEEEEEEETT---SEEEEEEEC-TTSCEEEEE-EEECSSCEEEEEECTTSSEEEEEETT-SEEEEE
T ss_pred EEcCCCCCceEEEEECCC---CcEEEEEcC-CCCceeEEE-eccccCCEEEEEECcCCCEEEEEcCC-CcEEEE
Confidence 34455 6999998754 468888876 322211111 21 11222345556789999988866 356677
No 156
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.95 E-value=11 Score=35.78 Aligned_cols=48 Identities=4% Similarity=-0.056 Sum_probs=27.9
Q ss_pred eEEEEEC-CCCcEEECcc--CCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCC
Q 042303 49 HSVLFDI-ETAKLKPLKI--QTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTC 101 (519)
Q Consensus 49 ~~~~yDp-~t~~w~~l~~--~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~ 101 (519)
...+||. .+++...+.. .... .......+ +.++++|+.+ ..+++||..
T Consensus 80 ~i~~wd~~~~~~~~~~~~~~~~~~-v~~l~~~~-~~~l~s~~~d---~~i~iwd~~ 130 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTNNEANLG-ICRICKYG-DDKLIAASWD---GLIEVIDPR 130 (342)
T ss_dssp CEEEECSSSSSSEEECBSCCCCSC-EEEEEEET-TTEEEEEETT---SEEEEECHH
T ss_pred eEEEEEeccCCceEeccccCCCCc-eEEEEeCC-CCEEEEEcCC---CeEEEEccc
Confidence 3557888 8777765543 2111 11123334 7777777653 578888865
No 157
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=90.88 E-value=11 Score=35.46 Aligned_cols=63 Identities=16% Similarity=0.197 Sum_probs=36.0
Q ss_pred CCeEEEecCCCCCCceEEEEeCCCCC-------ccccCCCCCCCc-cccceEEEcCC--CcEEEEcCCCCCceEEe-CCC
Q 042303 79 DGHLVGTGGYQGGANTVRYLWTCDTC-------DWIEYPTALAEP-RWYSTQVTLPD--GGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 79 dG~llv~GG~~~g~~~v~~ydp~~~~-------~W~~~~~~m~~~-R~y~s~~~L~d--G~V~viGG~~~~~~E~y-P~~ 147 (519)
|++++++|+.+ ..+++||.. +. .|..... +... ..-.+++..++ ++.++.|+.++ .+.+| ..+
T Consensus 70 d~~~l~s~~~d---g~v~vwd~~-~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-~v~iwd~~~ 143 (351)
T 3f3f_A 70 YGRIIASASYD---KTVKLWEED-PDQEECSGRRWNKLCT-LNDSKGSLYSVKFAPAHLGLKLACLGNDG-ILRLYDALE 143 (351)
T ss_dssp GCSEEEEEETT---SCEEEEEEC-TTSCTTSSCSEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTC-EEEEEECSS
T ss_pred CCCEEEEEcCC---CeEEEEecC-CCcccccccCcceeee-ecccCCceeEEEEcCCCCCcEEEEecCCC-cEEEecCCC
Confidence 58899998864 467888865 32 1222211 2211 12234455566 88899888763 56666 443
No 158
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=90.86 E-value=20 Score=38.65 Aligned_cols=86 Identities=10% Similarity=-0.064 Sum_probs=50.3
Q ss_pred eEEEEECCCCcEEECccCCCc------------------------ccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDT------------------------WCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTC 104 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~------------------------~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~ 104 (519)
...+||..+++.+.+...... ........+||+.++++.. ..++++|.. +.
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~-~~ 139 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK-QE 139 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET----TEEEEEESS-SC
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC----CcEEEEECC-CC
Confidence 455788888887665432111 1234567789998887753 689999987 54
Q ss_pred ---ccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe
Q 042303 105 ---DWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 105 ---~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
.-..+.. ....-...+.-+||+.++.+.. ..+.++
T Consensus 140 ~~~~~~~l~~---~~~~~~~~~~SPDG~~la~~~~--~~i~~~ 177 (741)
T 2ecf_A 140 GKAAVRQLTH---GEGFATDAKLSPKGGFVSFIRG--RNLWVI 177 (741)
T ss_dssp STTSCCBCCC---SSSCEEEEEECTTSSEEEEEET--TEEEEE
T ss_pred CcceEEEccc---CCcccccccCCCCCCEEEEEeC--CcEEEE
Confidence 3333321 1222334555679987666543 244455
No 159
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.71 E-value=12 Score=35.60 Aligned_cols=180 Identities=9% Similarity=0.028 Sum_probs=96.6
Q ss_pred cCCCcEEEEcCCCC-CceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeC--
Q 042303 125 LPDGGFIVVGGRGA-FSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSN-- 200 (519)
Q Consensus 125 L~dG~V~viGG~~~-~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg-- 200 (519)
+.++.+|+..|..+ .++..+ +.+++=. ...++ +...|.......+++||+...
T Consensus 28 ~~~~~LyestG~~g~S~v~~vD~~tgkv~---~~~~l--------------------~~~~fgeGi~~~~~~ly~ltw~~ 84 (243)
T 3mbr_X 28 YLRGHLYESTGETGRSSVRKVDLETGRIL---QRAEV--------------------PPPYFGAGIVAWRDRLIQLTWRN 84 (243)
T ss_dssp EETTEEEEEECCTTSCEEEEEETTTCCEE---EEEEC--------------------CTTCCEEEEEEETTEEEEEESSS
T ss_pred EECCEEEEECCCCCCceEEEEECCCCCEE---EEEeC--------------------CCCcceeEEEEeCCEEEEEEeeC
Confidence 34789999999865 456777 7765311 01111 112233455667899999874
Q ss_pred CceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceE
Q 042303 201 NRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCG 280 (519)
Q Consensus 201 ~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 280 (519)
....+||+++-+....++- + ..|-++. ...+++|+.-|.+ .+.
T Consensus 85 ~~v~v~D~~tl~~~~ti~~-~-------~~Gwglt-----------~dg~~L~vSdgs~------------------~l~ 127 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRY-P-------GEGWALT-----------SDDSHLYMSDGTA------------------VIR 127 (243)
T ss_dssp SEEEEEETTTTEEEEEEEC-S-------SCCCEEE-----------ECSSCEEEECSSS------------------EEE
T ss_pred CEEEEEECCcCcEEEEEeC-C-------CCceEEe-----------eCCCEEEEECCCC------------------eEE
Confidence 3577899999886655542 1 1233332 1256677765532 234
Q ss_pred EEEecCCCCce----EeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCC
Q 042303 281 RIRITEPNPVW----KKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTT 356 (519)
Q Consensus 281 ~~d~~~~~~~W----~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~ 356 (519)
.+|+. +.+- +....+.+-.+.+-....||+||+..-.+ ..+.+-||++.+-..|-.++.+.
T Consensus 128 ~iDp~--t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s-------------~~I~vIDp~tG~V~~~idl~~l~ 192 (243)
T 3mbr_X 128 KLDPD--TLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLT-------------SRIARIDPASGKVVAWIDLQALV 192 (243)
T ss_dssp EECTT--TCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTT-------------TEEEEECTTTCBEEEEEECGGGS
T ss_pred EEeCC--CCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCC-------------CeEEEEECCCCCEEEEEECCcCc
Confidence 45554 2221 11122223222233344599999654211 15788999998655555544331
Q ss_pred c-------CC--ccceeeeEcCCCcEEEecCC
Q 042303 357 I-------PR--MYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 357 ~-------~R--~yhs~a~LlpdG~V~v~GG~ 379 (519)
- +. .--+.|.---.+|+||+|-.
T Consensus 193 ~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 193 PDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp TTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred cccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 1 11 11344543235788999853
No 160
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=90.36 E-value=12 Score=35.22 Aligned_cols=68 Identities=9% Similarity=-0.127 Sum_probs=35.7
Q ss_pred eccCCeEEEecCC----CCCCceEEEEeCCCCCccccCCC-CCC-CccccceEEEcCC-CcEEEEcCCCCCceEEe-CC
Q 042303 76 LTVDGHLVGTGGY----QGGANTVRYLWTCDTCDWIEYPT-ALA-EPRWYSTQVTLPD-GGFIVVGGRGAFSYEYI-PP 146 (519)
Q Consensus 76 ~l~dG~llv~GG~----~~g~~~v~~ydp~~~~~W~~~~~-~m~-~~R~y~s~~~L~d-G~V~viGG~~~~~~E~y-P~ 146 (519)
...+|+++++... ......+..||+. +.++..... ... ....-.+.+.-+| |++||....+ .+..| +.
T Consensus 25 ~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--~l~~~d~~ 100 (314)
T 1pjx_A 25 FDKNGDFYIVAPEVEVNGKPAGEILRIDLK-TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GLLVVQTD 100 (314)
T ss_dssp ECTTSCEEEEETTCEETTEECCEEEEECTT-TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--EEEEEETT
T ss_pred ECCCCCEEEEEeccccCCCCCCEEEEEeCC-CCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--CEEEEeCC
Confidence 3467888887110 0012468899987 666654321 000 1112234445567 8999876432 45556 55
No 161
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.16 E-value=17 Score=36.73 Aligned_cols=64 Identities=8% Similarity=-0.013 Sum_probs=34.4
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCc-EEEEcCCCCCceEEe-CC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGG-FIVVGGRGAFSYEYI-PP 146 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~-V~viGG~~~~~~E~y-P~ 146 (519)
++.++|+||++... ...++.||+. +..-........ .- + .+.-++|+ +|+........+..+ +.
T Consensus 137 a~d~~g~lyv~d~~---~~~I~~id~~-~g~~~~~~~~~~--~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 137 AAVGNNTVLAYQRD---DPRVRLISVD-DNKVTTVHPGFK--GG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp EECSTTEEEEEETT---TTEEEEEETT-TTEEEEEEETCC--BC-B-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred EEeCCCCEEEEecC---CCcEEEEECC-CCEEEEeeccCC--CC-c-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 34478999998642 3689999987 554433322111 11 2 45556776 455443222245555 44
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.97 E-value=2.9 Score=40.07 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=18.3
Q ss_pred eCCcEEEEeCC--ceEEeeCCCCeEEEEc
Q 042303 191 TDGNLFIFSNN--RSILFDPKANRVIREY 217 (519)
Q Consensus 191 ~~G~Ifv~Gg~--~~~~yDp~t~~w~~~~ 217 (519)
.++++|+.++. ...+||..+++..+.+
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~ 37 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSC 37 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence 46677776543 4668999998765444
No 163
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.81 E-value=15 Score=35.42 Aligned_cols=69 Identities=10% Similarity=0.034 Sum_probs=43.6
Q ss_pred cCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeC--C
Q 042303 125 LPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSN--N 201 (519)
Q Consensus 125 L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg--~ 201 (519)
+.++.+|+..|..+. +..+ +++++-.. .. +. ...|.......+++||+... .
T Consensus 62 ~~~~~Ly~stG~~g~-v~~iD~~Tgkv~~---~~--l~-------------------~~~FgeGit~~g~~Ly~ltw~~~ 116 (268)
T 3nok_A 62 FHQGHFFESTGHQGT-LRQLSLESAQPVW---ME--RL-------------------GNIFAEGLASDGERLYQLTWTEG 116 (268)
T ss_dssp EETTEEEEEETTTTE-EEECCSSCSSCSE---EE--EC-------------------TTCCEEEEEECSSCEEEEESSSC
T ss_pred EECCEEEEEcCCCCE-EEEEECCCCcEEe---EE--CC-------------------CCcceeEEEEeCCEEEEEEccCC
Confidence 347899999998654 6667 77653211 11 11 11222345566789999873 4
Q ss_pred ceEEeeCCCCeEEEEcc
Q 042303 202 RSILFDPKANRVIREYP 218 (519)
Q Consensus 202 ~~~~yDp~t~~w~~~~p 218 (519)
...+||+++.+...+++
T Consensus 117 ~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEECCcCcEEEEEe
Confidence 57789999988666554
No 164
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=89.05 E-value=7.6 Score=36.65 Aligned_cols=136 Identities=12% Similarity=0.016 Sum_probs=73.2
Q ss_pred eEEEEECCCCcEEECccCC----CcccCCCeeccCCeEEEe----cCC----------CCCCceEEEEeCCCCCccccCC
Q 042303 49 HSVLFDIETAKLKPLKIQT----DTWCSSGGLTVDGHLVGT----GGY----------QGGANTVRYLWTCDTCDWIEYP 110 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~----~~~c~~~~~l~dG~llv~----GG~----------~~g~~~v~~ydp~~~~~W~~~~ 110 (519)
....||+++++++.+.... ..+....++.++|+++++ |.. ..+...+..||+. .+.....
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~ 168 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLSAPI 168 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEEEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEEEee
Confidence 3567999898887653221 112334566789999997 431 1123478888875 2232222
Q ss_pred CCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CC-CCCC-CCcccccccchhccccccCCcccccccccccCccce-
Q 042303 111 TALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PP-QGQS-NKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPF- 186 (519)
Q Consensus 111 ~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~-~~~w-~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~- 186 (519)
..+..+ .+.+.-+||+++ +.......+.+| .. .++. .. ...+ ... .-+|.
T Consensus 169 ~~~~~~---~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~----~~~~-~~~-----------------~~~p~~ 222 (296)
T 3e5z_A 169 RDRVKP---NGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQ----GVHF-TVE-----------------PGKTDG 222 (296)
T ss_dssp CCCSSE---EEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEE----EEEE-CCS-----------------SSCCCS
T ss_pred cCCCCC---ccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCC----CeEe-eCC-----------------CCCCCe
Confidence 112222 245555789988 444444556666 43 2211 00 0000 000 01122
Q ss_pred EEEeeCCcEEEEeCCceEEeeCCCCe
Q 042303 187 VNLVTDGNLFIFSNNRSILFDPKANR 212 (519)
Q Consensus 187 ~~~~~~G~Ifv~Gg~~~~~yDp~t~~ 212 (519)
+..-++|+||+..+....+||+....
T Consensus 223 i~~d~~G~l~v~~~~~v~~~~~~g~~ 248 (296)
T 3e5z_A 223 LRVDAGGLIWASAGDGVHVLTPDGDE 248 (296)
T ss_dssp EEEBTTSCEEEEETTEEEEECTTSCE
T ss_pred EEECCCCCEEEEcCCeEEEECCCCCE
Confidence 23447899999886678899998554
No 165
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.04 E-value=7.6 Score=37.37 Aligned_cols=34 Identities=9% Similarity=-0.038 Sum_probs=23.7
Q ss_pred ceEEEe-eCCcEEEEeC----CceEEeeCCCCeEEEEcc
Q 042303 185 PFVNLV-TDGNLFIFSN----NRSILFDPKANRVIREYP 218 (519)
Q Consensus 185 p~~~~~-~~G~Ifv~Gg----~~~~~yDp~t~~w~~~~p 218 (519)
|+.... +||++|+..| .....+|+.+++..+.++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~ 61 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK 61 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe
Confidence 334444 4699999865 356789999999776553
No 166
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=88.48 E-value=13 Score=35.80 Aligned_cols=91 Identities=13% Similarity=0.006 Sum_probs=55.7
Q ss_pred eEEEEECCCCcEEECcc-CCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC--ccccceEEEc
Q 042303 49 HSVLFDIETAKLKPLKI-QTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE--PRWYSTQVTL 125 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~--~R~y~s~~~L 125 (519)
...+||..+++-..+.. .....+....+.+||+++++|+.+ ..+++||.. +.+-.. . .+.. ...-.+++--
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d---g~i~iwd~~-~~~~~~-~-~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD---GILDVYNLS-SPDQAS-S-RFPVDEEAKIKEVKFA 223 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT---SCEEEEESS-CTTSCC-E-ECCCCTTSCEEEEEEC
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC-CCCCCc-c-EEeccCCCCEEEEEEe
Confidence 45689998887644322 222234445667899999999854 579999987 443220 1 1222 2222344555
Q ss_pred CCCcEEEEcCCCCCceEEe-CCC
Q 042303 126 PDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 126 ~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
+||+.++.|+. . .+.+| ..+
T Consensus 224 ~~g~~l~s~~~-~-~v~iwd~~~ 244 (343)
T 3lrv_A 224 DNGYWMVVECD-Q-TVVCFDLRK 244 (343)
T ss_dssp TTSSEEEEEES-S-BEEEEETTS
T ss_pred CCCCEEEEEeC-C-eEEEEEcCC
Confidence 79999999883 3 78888 544
No 167
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=88.44 E-value=7.7 Score=37.17 Aligned_cols=84 Identities=13% Similarity=0.001 Sum_probs=46.6
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCC-CCCceEEEEeCCCCCcccc-CCCCCCCccccceEEEcCC
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQ-GGANTVRYLWTCDTCDWIE-YPTALAEPRWYSTQVTLPD 127 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~-~g~~~v~~ydp~~~~~W~~-~~~~m~~~R~y~s~~~L~d 127 (519)
...||+++++++.+.........+.+..+||++++..... .....+.+||+. +..... +.. ......-...+.-++
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN-GDNLQDIIED-LSTAYCIDDMVFDSK 145 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT-SCSCEEEECS-SSSCCCEEEEEECTT
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC-CCEEEEEEcc-CccCCcccceEECCC
Confidence 4578888888776532222222223445789988875322 122478899987 554331 121 112222234556678
Q ss_pred CcEEEEcC
Q 042303 128 GGFIVVGG 135 (519)
Q Consensus 128 G~V~viGG 135 (519)
|++|+...
T Consensus 146 g~l~v~~~ 153 (333)
T 2dg1_A 146 GGFYFTDF 153 (333)
T ss_dssp SCEEEEEC
T ss_pred CCEEEEec
Confidence 99998754
No 168
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=88.33 E-value=16 Score=33.86 Aligned_cols=107 Identities=14% Similarity=0.102 Sum_probs=56.2
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCc-cccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCC
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEP-RWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNK 152 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~-R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~ 152 (519)
+...+|+|++.... ...+..||+. .++.... +... ..-.+.+.-++|++|+..... ..+..| +. ++..
T Consensus 26 ~~d~~g~l~v~~~~---~~~v~~~~~~--~~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~-~~v~~~d~~-g~~~- 95 (300)
T 2qc5_A 26 TSSEDGKVWFTQHK---ANKISSLDQS--GRIKEFE--VPTPDAKVMCLIVSSLGDIWFTENGA-NKIGKLSKK-GGFT- 95 (300)
T ss_dssp EECTTSCEEEEETT---TTEEEEECTT--SCEEEEE--CSSTTCCEEEEEECTTSCEEEEETTT-TEEEEECTT-SCEE-
T ss_pred eECCCCCEEEEcCC---CCeEEEECCC--CceEEEE--CCCCCCcceeEEECCCCCEEEEecCC-CeEEEECCC-CCeE-
Confidence 44568999887532 3468889875 3343321 1111 112344555689999975432 345566 54 4321
Q ss_pred cccccccchhccccccCCcccccccccccCccceEEE-eeCCcEEEEeC--CceEEeeCCCCeEE
Q 042303 153 QSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNL-VTDGNLFIFSN--NRSILFDPKANRVI 214 (519)
Q Consensus 153 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~-~~~G~Ifv~Gg--~~~~~yDp~t~~w~ 214 (519)
....... ...|...+ .++|+||+... ....+||+. ++..
T Consensus 96 ---~~~~~~~-------------------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 96 ---EYPLPQP-------------------DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp ---EEECSST-------------------TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred ---EecCCCC-------------------CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 1111000 01123333 35899998764 346789988 5543
No 169
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=88.17 E-value=13 Score=39.67 Aligned_cols=129 Identities=19% Similarity=0.210 Sum_probs=67.6
Q ss_pred CCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCCCCCccCCCCCceeeEEEEcCCCCCCccCCCCCceecCCCCC
Q 042303 343 EKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKSDC 422 (519)
Q Consensus 343 t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~~~~~~p~~~~vEiy~Ppyl~~~~~~~RP~i~~~~~p~ 422 (519)
.|.|.+|+....+.......+..+.++||+|+++.-.. . ......|....|... .-| . ... +.
T Consensus 305 ~D~G~tW~~~~~l~~~~~~Y~~l~~~~dg~i~~~ye~~-~----------~i~~~~~~~~~l~~~---~~~-~-~~~-~~ 367 (601)
T 1w8o_A 305 CDDGQTWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPG-T----------GIRYANFNLAWLGGI---CAP-F-TIP-DV 367 (601)
T ss_dssp SSTTSCCCEEEEEEEEECCCEEEEECTTSCEEEEECCS-S----------EEEEEEECHHHHTBC---SCC-E-ECC-CE
T ss_pred CCCCCCCCCceEeCCCCCCCCeEEEcCCCeEEEEEecC-C----------cceEEEecHHHhccc---cCC-C-cCc-cc
Confidence 45577897643222222233445567999998885322 1 345567777776531 112 2 221 45
Q ss_pred ccccCceEEEEEEeccc--cccceEEEEEEeCCcccccCCCCCceEEeeeeeeeecCCCCc---EEEEEEcCCCCCcCCC
Q 042303 423 MVGYGQRISIQVKTTEG--IKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQ---HKIVAEAPPSGVITPP 497 (519)
Q Consensus 423 ~~~~g~~~~v~~~~~~~--~~~~~~~v~l~~~~~~THs~n~~QR~v~L~~~~~~~~~~~g~---~~~~v~~P~~~~~~pp 497 (519)
++..|++++|++..... ....-.+++|..+...+= +- .+.. ...|. ..++|++|.. +.+
T Consensus 368 ~~~~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~------~~-~~~~------~~~g~~~t~~~~vt~~~~---~~~ 431 (601)
T 1w8o_A 368 ALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQV------QG-SVEP------LMPGRQAKGQVTITVPAG---TTP 431 (601)
T ss_dssp EECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEE------EE-EECC------BCTTCEEEEEEEEECCTT---CCC
T ss_pred eecCCceeEEEEEEECCCceeccCceEEEecCCCcEE------ec-cccc------cCCCCceEEEEEEecCCC---CCC
Confidence 57788877777664321 111225677666554441 11 1111 11232 2347788764 558
Q ss_pred cceEEEE
Q 042303 498 GYYLLYV 504 (519)
Q Consensus 498 G~ymlf~ 504 (519)
|.|+|=+
T Consensus 432 g~y~l~~ 438 (601)
T 1w8o_A 432 GRYRVGA 438 (601)
T ss_dssp EEEEEEE
T ss_pred CcEEeeE
Confidence 9998744
No 170
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=88.04 E-value=20 Score=38.74 Aligned_cols=116 Identities=11% Similarity=-0.049 Sum_probs=59.9
Q ss_pred eeccCCeEEEecCCCCC---CceEEEEeCCCCCccccCCC--CCC-------------Ccc-------ccceEEEcCCCc
Q 042303 75 GLTVDGHLVGTGGYQGG---ANTVRYLWTCDTCDWIEYPT--ALA-------------EPR-------WYSTQVTLPDGG 129 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g---~~~v~~ydp~~~~~W~~~~~--~m~-------------~~R-------~y~s~~~L~dG~ 129 (519)
...+||+.+++++..++ ...++++|.. +.+...+.. ... ..| ...+.+.-+||+
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIG-SGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETT-TCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECC-CCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 45679998888765322 3478899987 555443321 010 001 123445557998
Q ss_pred EEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeC-CceEEee
Q 042303 130 FIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSN-NRSILFD 207 (519)
Q Consensus 130 V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg-~~~~~yD 207 (519)
.++++.. ..+.+| ..++.- .....+. ... ... -.....+||+.++++. ....++|
T Consensus 122 ~l~~~~~--~~i~~~d~~~~~~---~~~~~l~-~~~----------------~~~-~~~~~SPDG~~la~~~~~~i~~~d 178 (741)
T 2ecf_A 122 RLLFPLG--GELYLYDLKQEGK---AAVRQLT-HGE----------------GFA-TDAKLSPKGGFVSFIRGRNLWVID 178 (741)
T ss_dssp EEEEEET--TEEEEEESSSCST---TSCCBCC-CSS----------------SCE-EEEEECTTSSEEEEEETTEEEEEE
T ss_pred EEEEEeC--CcEEEEECCCCCc---ceEEEcc-cCC----------------ccc-ccccCCCCCCEEEEEeCCcEEEEe
Confidence 7777654 456666 333200 0001110 000 000 0123457998666553 4577889
Q ss_pred CCCCeEE
Q 042303 208 PKANRVI 214 (519)
Q Consensus 208 p~t~~w~ 214 (519)
..+++..
T Consensus 179 ~~~g~~~ 185 (741)
T 2ecf_A 179 LASGRQM 185 (741)
T ss_dssp TTTTEEE
T ss_pred cCCCCEE
Confidence 9888754
No 171
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=87.82 E-value=14 Score=36.46 Aligned_cols=141 Identities=14% Similarity=0.044 Sum_probs=70.6
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCcc-ccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPR-WYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R-~y~s~~~L~d 127 (519)
...+||+++.+....-. +........+-+||+++++|+. ..+.+++.. +........ ..... .-.+++..+|
T Consensus 158 ~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~----~~~~~~~~~-~~~~~~~~~-~~~~~~~v~~v~fspd 230 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG----SSLEVISTV-TGSCIARKT-DFDKNWSLSKINFIAD 230 (365)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS----SCEEEEETT-TCCEEEEEC-CCCTTEEEEEEEEEET
T ss_pred EEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc----eeEEEEEec-cCcceeeee-cCCCCCCEEEEEEcCC
Confidence 35589998876543221 2222223456689999998863 246666655 333221111 11111 1234455679
Q ss_pred CcEEEEcCCCCC---ceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc-
Q 042303 128 GGFIVVGGRGAF---SYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR- 202 (519)
Q Consensus 128 G~V~viGG~~~~---~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~- 202 (519)
|+.++.++.+.. .+..| ...... ..... .... ++ ....+ .+...+||++++.|+.+
T Consensus 231 g~~l~~~s~d~~~~~~i~~~~~~~~~~----~~~~~--~~~~---~~---------~~~V~-~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 231 DTVLIAASLKKGKGIVLTKISIKSGNT----SVLRS--KQVT---NR---------FKGIT-SMDVDMKGELAVLASNDN 291 (365)
T ss_dssp TEEEEEEEESSSCCEEEEEEEEETTEE----EEEEE--EEEE---SS---------CSCEE-EEEECTTSCEEEEEETTS
T ss_pred CCEEEEEecCCcceeEEeeccccccee----cceee--eeec---CC---------CCCeE-eEEECCCCCceEEEcCCC
Confidence 999998876542 22222 111100 00000 0000 00 00001 12335799999998764
Q ss_pred -eEEeeCCCCeEEE
Q 042303 203 -SILFDPKANRVIR 215 (519)
Q Consensus 203 -~~~yDp~t~~w~~ 215 (519)
..+||..+.+-.+
T Consensus 292 ~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 292 SIALVKLKDLSMSK 305 (365)
T ss_dssp CEEEEETTTTEEEE
T ss_pred EEEEEECCCCcEEE
Confidence 6789999887543
No 172
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=87.63 E-value=21 Score=34.52 Aligned_cols=143 Identities=10% Similarity=0.070 Sum_probs=70.1
Q ss_pred CCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccc
Q 042303 192 DGNLFIFSNNR--SILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDK 269 (519)
Q Consensus 192 ~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~ 269 (519)
++++++.|+.+ ..+||..+.+....+. .+. .. ......+. ..+++++++|+.+
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~--~~----~~~~~~~~--------~~~~~~~~~~~~~---------- 165 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEE--TV----YSHHMSPV--------STKHCLVAVGTRG---------- 165 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEE-CSS--CE----EEEEECSS--------CSSCCEEEEEESS----------
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceecc-CCC--ce----eeeEeecC--------CCCCcEEEEEcCC----------
Confidence 67778777643 6689999887554332 111 00 11122221 1256678887654
Q ss_pred cccccCCCceEEEEecCCCCceEeccCCcceeeceeEEecCCc-EEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcce
Q 042303 270 KQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGD-VLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHR 348 (519)
Q Consensus 270 ~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~-V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~ 348 (519)
..+..+|+......... .-..... .+....|+++ ++++|+.+ | .+.+||..+.....
T Consensus 166 -------~~v~~~d~~~~~~~~~~-~~~~~~v-~~~~~~~~~~~ll~~~~~d-g------------~i~i~d~~~~~~~~ 223 (408)
T 4a11_B 166 -------PKVQLCDLKSGSCSHIL-QGHRQEI-LAVSWSPRYDYILATASAD-S------------RVKLWDVRRASGCL 223 (408)
T ss_dssp -------SSEEEEESSSSCCCEEE-CCCCSCE-EEEEECSSCTTEEEEEETT-S------------CEEEEETTCSSCCS
T ss_pred -------CeEEEEeCCCcceeeee-cCCCCcE-EEEEECCCCCcEEEEEcCC-C------------cEEEEECCCCCccc
Confidence 13456776532111111 1111111 2334568888 78887753 1 35788876652111
Q ss_pred eee-----------cCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 349 FQE-----------LAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 349 W~~-----------~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
... ..........-......|||+.+++|+..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 267 (408)
T 4a11_B 224 ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN 267 (408)
T ss_dssp EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC
Confidence 110 000001111112234578999988887643
No 173
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=87.29 E-value=26 Score=35.13 Aligned_cols=65 Identities=6% Similarity=-0.083 Sum_probs=35.4
Q ss_pred CeeccC-CeEEEecCCCCCCceEEEEeCCCCC--------ccccCCCCCCC-ccccceEEEcCCCc-EEEEcCCCCCceE
Q 042303 74 GGLTVD-GHLVGTGGYQGGANTVRYLWTCDTC--------DWIEYPTALAE-PRWYSTQVTLPDGG-FIVVGGRGAFSYE 142 (519)
Q Consensus 74 ~~~l~d-G~llv~GG~~~g~~~v~~ydp~~~~--------~W~~~~~~m~~-~R~y~s~~~L~dG~-V~viGG~~~~~~E 142 (519)
..+.++ ++++++|+.. ..+.+||.. +. ....... +.. ...-.+++..++++ +++.|+.++ .+.
T Consensus 134 l~~~p~~~~~lat~~~d---g~V~vwd~~-~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg-~i~ 207 (430)
T 2xyi_A 134 ARYMPQNACVIATKTPS---SDVLVFDYT-KHPSKPEPSGECQPDLR-LRGHQKEGYGLSWNPNLNGYLLSASDDH-TIC 207 (430)
T ss_dssp EEEETTEEEEEEEECSS---SCEEEEEGG-GSCSSCCTTCCCCCSEE-EECCSSCCCCEEECTTSTTEEEEECTTS-CEE
T ss_pred EEECCCCCcEEEEECCC---CcEEEEECC-CcccccCccccCCCcEE-ecCCCCCeEEEEeCCCCCCeEEEEeCCC-eEE
Confidence 345565 6788888753 368888864 21 1211111 111 11123445556777 888887764 466
Q ss_pred Ee
Q 042303 143 YI 144 (519)
Q Consensus 143 ~y 144 (519)
+|
T Consensus 208 vw 209 (430)
T 2xyi_A 208 LW 209 (430)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 174
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=87.17 E-value=8.4 Score=38.91 Aligned_cols=83 Identities=7% Similarity=0.041 Sum_probs=49.9
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDG 128 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG 128 (519)
...+||..+++.+.+..... ........+||+.+++.+..++...++++|.. +.+...+.. ......+.+--+||
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~-~~~~~~l~~---~~~~~~~~~~spdg 278 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQIRQVTD---GRSNNTEPTWFPDS 278 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCEEECCC---CSSCEEEEEECTTS
T ss_pred EEEEEECCCCcEEEeecCCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECC-CCCEEeCcC---CCCcccceEECCCC
Confidence 45689999998876543322 23334567899866644434456689999987 555544432 11222334455799
Q ss_pred cEEEEcCC
Q 042303 129 GFIVVGGR 136 (519)
Q Consensus 129 ~V~viGG~ 136 (519)
+.++++..
T Consensus 279 ~~l~~~s~ 286 (415)
T 2hqs_A 279 QNLAFTSD 286 (415)
T ss_dssp SEEEEEEC
T ss_pred CEEEEEEC
Confidence 86666554
No 175
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=87.11 E-value=4.8 Score=40.50 Aligned_cols=172 Identities=12% Similarity=0.145 Sum_probs=78.8
Q ss_pred cCccceEEEeeCCcEEEEeC--------CceEEe--eCCCCeEEEEccCCCCCCCccCC--CCcEEecccccccCCcccc
Q 042303 181 NNLYPFVNLVTDGNLFIFSN--------NRSILF--DPKANRVIREYPVLTGGSRNYPA--SGMSVLLPIKLHAGHQKII 248 (519)
Q Consensus 181 ~~~yp~~~~~~~G~Ifv~Gg--------~~~~~y--Dp~t~~w~~~~p~~p~~~r~~~~--~g~av~l~l~~~~~~~~~~ 248 (519)
...||..+.++||.|++..- ....+| +-...+|.+ +..+......+.. ......+|-. -....
T Consensus 22 ~~~yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG~TW~~-~~~v~~~~~g~~~~~~P~l~~lp~~----v~~~~ 96 (355)
T 3a72_A 22 RTLYPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHGKTWNE-ISRVHDTVNGYGLRYQPFLYSLPER----VGSFK 96 (355)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSCCEE-EEEECCTTTSSCEEEEEEEEECSSC----BTTBC
T ss_pred CCccceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCCcCcCC-CcccCCCcCCcccccCCcEEecCcc----cccCC
Confidence 45689999999999998631 122233 233456763 4332211100000 0111122200 00112
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-c-----CCcc-----eeeceeEEecCCcEEEEc
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-M-----MPTR-----RVMGDMTILPTGDVLLVN 317 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~-----M~~~-----R~~~~~vvLpdG~V~viG 317 (519)
+|+|+++|-...... ....+..+--.|...+|+.. . ++.+ ..+...+.+.+|+|++.-
T Consensus 97 ~G~ll~~~~~~~~d~-----------~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP~~~~~~G~l~~~~ 165 (355)
T 3a72_A 97 KGTLLLAGSSIPTDL-----------SSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEPFLLANKGKLICYY 165 (355)
T ss_dssp TTCEEEEEEECCTTC-----------CCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEEEEEEETTEEEEEE
T ss_pred CCcEEEEEeeecCCC-----------CCceEEEEEECCCCccCccCccccccCccccccCCCccccceEEccCCeEEEEE
Confidence 788888752210000 00123334445567889875 3 2211 121123567899998875
Q ss_pred CcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCC-----cCCccceeeeEcCCCcEEEe
Q 042303 318 GAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTT-----IPRMYHSVSVLLPDGKVLIA 376 (519)
Q Consensus 318 G~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~-----~~R~yhs~a~LlpdG~V~v~ 376 (519)
..+.+.. ... +....--.+| |.+|+...... ..|.....++-|+||+++++
T Consensus 166 ~~~~~~~-----~~~--~~~~~~~S~D-G~TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 166 SDQRDNA-----TYG--QTMVHQVTND-LKNWGPVVEDVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp EECCCTT-----TCS--CEEEEEEESS-SSSCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCC-----CCC--cEEEEEECCC-CCCCCCCeeccccCccCCCCCceEEEECCCCCEEEE
Confidence 3321100 001 1111122345 77997644321 12333345667999999766
No 176
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=87.10 E-value=25 Score=36.83 Aligned_cols=50 Identities=20% Similarity=0.289 Sum_probs=30.5
Q ss_pred EecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCC
Q 042303 307 ILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 307 vLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 380 (519)
..|||++++.+..+ + ...+|+. + +.... . ....++.+.- ||++++.++..
T Consensus 253 ~spdg~~~~~~~~~-g------------~~~l~~~--g---~~~~~---~-~~~v~~~~~s--dg~~l~~~s~~ 302 (582)
T 3o4h_A 253 YLPDGRLAVVARRE-G------------RSAVFID--G---ERVEA---P-QGNHGRVVLW--RGKLVTSHTSL 302 (582)
T ss_dssp ECTTSCEEEEEEET-T------------EEEEEET--T---EEECC---C-SSEEEEEEEE--TTEEEEEEEET
T ss_pred EcCCCcEEEEEEcC-C------------cEEEEEE--C---Ceecc---C-CCceEEEEec--CCEEEEEEcCC
Confidence 56999988877543 1 4578887 4 44331 1 1223445544 99998887653
No 177
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=86.77 E-value=25 Score=34.37 Aligned_cols=49 Identities=16% Similarity=0.017 Sum_probs=30.8
Q ss_pred eeEEEEECCCCcEEECccC---CCcccCCCeeccCCeEEEecCCCCCCceEEEEeC
Q 042303 48 AHSVLFDIETAKLKPLKIQ---TDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWT 100 (519)
Q Consensus 48 ~~~~~yDp~t~~w~~l~~~---~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp 100 (519)
.+...+|+++++.+.+... ....+...++.+||+.+.++... .+.+||.
T Consensus 16 i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~----~v~~~~~ 67 (365)
T 1jof_A 16 IFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK----KWSSFAV 67 (365)
T ss_dssp EEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT----EEEEEEE
T ss_pred EEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc----eEEEEEE
Confidence 3555788999988766432 11234445667899866555432 6788875
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=86.52 E-value=39 Score=36.44 Aligned_cols=95 Identities=12% Similarity=0.011 Sum_probs=52.9
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCC----------CceEEEEeCCCCCccc--cCCCCCCCc
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGG----------ANTVRYLWTCDTCDWI--EYPTALAEP 116 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g----------~~~v~~ydp~~~~~W~--~~~~~m~~~ 116 (519)
...++|.++++...............+..+||+.++....... ...+++++.. +..-. .+...-...
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~lv~~~~~~~ 226 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLG-TEPSKDTVVHERTGDP 226 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETT-SCGGGCEEEECCCCCT
T ss_pred EEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECC-CCchhceEEEecCCCC
Confidence 4557899999875111122222245677889988887654321 2458888876 43321 111101122
Q ss_pred cccceEEEcCCCcEEEEcCCCC-CceEEe
Q 042303 117 RWYSTQVTLPDGGFIVVGGRGA-FSYEYI 144 (519)
Q Consensus 117 R~y~s~~~L~dG~V~viGG~~~-~~~E~y 144 (519)
.+..+...-+||+.+++..... .+.++|
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~~~~~l~ 255 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGWSENDVY 255 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETTTEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEeCCCCceEEE
Confidence 4555666678998777765443 445665
No 179
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=85.97 E-value=8.2 Score=37.96 Aligned_cols=27 Identities=11% Similarity=0.235 Sum_probs=20.7
Q ss_pred EeeCCcEEEEeCCc--eEEeeCCCCeEEE
Q 042303 189 LVTDGNLFIFSNNR--SILFDPKANRVIR 215 (519)
Q Consensus 189 ~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~ 215 (519)
..+||+.++.|+.+ ..+||..+++-.+
T Consensus 135 ~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 135 VLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 34799999988754 6789999887544
No 180
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=85.48 E-value=32 Score=34.53 Aligned_cols=140 Identities=12% Similarity=0.047 Sum_probs=71.2
Q ss_pred EEEEECC--CCcEEE-Ccc-CCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCcccc-CCCCCCC-ccccceEE
Q 042303 50 SVLFDIE--TAKLKP-LKI-QTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIE-YPTALAE-PRWYSTQV 123 (519)
Q Consensus 50 ~~~yDp~--t~~w~~-l~~-~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~-~~~~m~~-~R~y~s~~ 123 (519)
..+||.. +++... +.. .....+....+.+||+.+++|+.. ..++.++.. +..... ....+.. ...-.+++
T Consensus 127 v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~---g~v~~~~~~-~~~~~~~~~~~~~~h~~~v~~~~ 202 (450)
T 2vdu_B 127 LLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF---GDVYSIDIN-SIPEEKFTQEPILGHVSMLTDVH 202 (450)
T ss_dssp EEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-SCCCSSCCCCCSEECSSCEEEEE
T ss_pred EEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC---CcEEEEecC-CcccccccceeeecccCceEEEE
Confidence 4578877 544322 211 112223334566799999988652 467888865 332221 1001221 12223445
Q ss_pred EcCC---CcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEe
Q 042303 124 TLPD---GGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFS 199 (519)
Q Consensus 124 ~L~d---G~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~G 199 (519)
.-+| |+.++.|+.+ ..+.+| ..+.+. ...++.. +. ..... +... +|+.++.|
T Consensus 203 ~sp~~~~~~~l~s~~~d-~~i~vwd~~~~~~-----~~~~~~~-------h~---------~~v~~-~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 203 LIKDSDGHQFIITSDRD-EHIKISHYPQCFI-----VDKWLFG-------HK---------HFVSS-ICCG-KDYLLLSA 258 (450)
T ss_dssp EEECTTSCEEEEEEETT-SCEEEEEESCTTC-----EEEECCC-------CS---------SCEEE-EEEC-STTEEEEE
T ss_pred EcCCCCCCcEEEEEcCC-CcEEEEECCCCce-----eeeeecC-------CC---------CceEE-EEEC-CCCEEEEE
Confidence 5568 8899988876 456666 443311 1111100 00 00010 1222 89988888
Q ss_pred CCc--eEEeeCCCCeEEEEc
Q 042303 200 NNR--SILFDPKANRVIREY 217 (519)
Q Consensus 200 g~~--~~~yDp~t~~w~~~~ 217 (519)
+.+ ..+||..+.+....+
T Consensus 259 ~~d~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 259 GGDDKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp ESSSEEEEEETTTCCEEEEE
T ss_pred eCCCeEEEEECCCCcEeeee
Confidence 754 568999988755444
No 181
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=84.62 E-value=19 Score=33.77 Aligned_cols=62 Identities=13% Similarity=-0.002 Sum_probs=32.1
Q ss_pred eEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCcc-ccceEEEcCCCc-EEEEcCCCCCceEEe-CCCC
Q 042303 81 HLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPR-WYSTQVTLPDGG-FIVVGGRGAFSYEYI-PPQG 148 (519)
Q Consensus 81 ~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R-~y~s~~~L~dG~-V~viGG~~~~~~E~y-P~~~ 148 (519)
.++++++. ...+.++|+. +.+....-. +.... .-..++.-+||+ +|+.+.. ...+.+| ..+.
T Consensus 2 ~~~v~~~~---~~~v~~~d~~-~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~~-~~~v~~~d~~~~ 66 (337)
T 1pby_B 2 DYILAPAR---PDKLVVIDTE-KMAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVNK-SESLVKIDLVTG 66 (337)
T ss_dssp EEEEEEET---TTEEEEEETT-TTEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEETT-TTEEEEEETTTC
T ss_pred cEEEEcCC---CCeEEEEECC-CCcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeCC-CCeEEEEECCCC
Confidence 45666553 3578899987 544322111 22211 123455667885 5565543 3456667 5443
No 182
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=83.65 E-value=21 Score=35.49 Aligned_cols=92 Identities=15% Similarity=0.045 Sum_probs=51.1
Q ss_pred CCceEEEEec---CCCCceEec-c-CCcc---------eeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeC
Q 042303 276 LQDCGRIRIT---EPNPVWKKE-M-MPTR---------RVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKT 341 (519)
Q Consensus 276 ~~s~~~~d~~---~~~~~W~~~-~-M~~~---------R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP 341 (519)
.+.+.+||+. .....|... + .... ...-++++=++|++||++-... ..+.++||
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~------------~~I~rV~p 166 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM------------PAIARVSA 166 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS------------CEEEEECT
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC------------CeEEEEeC
Confidence 4567889976 335567653 2 1111 2234667788999999864321 13577888
Q ss_pred CCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCC
Q 042303 342 KEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 342 ~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
+...-..|-.-.+....|..-.-.+..|||+.|++-..
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 76533346432222223432333345689987666544
No 183
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=83.08 E-value=21 Score=34.24 Aligned_cols=30 Identities=7% Similarity=0.163 Sum_probs=22.4
Q ss_pred EeeCCcEEEEeCC----ceEEeeCCCCeEEEEcc
Q 042303 189 LVTDGNLFIFSNN----RSILFDPKANRVIREYP 218 (519)
Q Consensus 189 ~~~~G~Ifv~Gg~----~~~~yDp~t~~w~~~~p 218 (519)
...||.+|+..|. ....+|+++++..+.++
T Consensus 49 ~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~ 82 (262)
T 3nol_A 49 FYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIE 82 (262)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTTCCEEEEEE
T ss_pred EEECCEEEEECCCCCCceEEEEECCCCcEEEEEe
Confidence 3448899998775 45689999999776553
No 184
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=82.17 E-value=27 Score=33.86 Aligned_cols=76 Identities=21% Similarity=0.430 Sum_probs=44.1
Q ss_pred cCCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCcccee
Q 042303 285 TEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSV 364 (519)
Q Consensus 285 ~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~ 364 (519)
.+....|+....+........+..++|+++++|-. | .+|--..+.|.+|+.+.. ..++..+++
T Consensus 148 ~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~--G--------------~~~~S~d~gG~tW~~~~~-~~~~~~~~~ 210 (327)
T 2xbg_A 148 KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSR--G--------------SFYSTWEPGQTAWEPHNR-TTSRRLHNM 210 (327)
T ss_dssp SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETT--S--------------SEEEEECTTCSSCEEEEC-CSSSCEEEE
T ss_pred cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECC--C--------------cEEEEeCCCCCceeECCC-CCCCcccee
Confidence 34467899873233333445556788998877632 1 122211112458988743 334555665
Q ss_pred eeEcCCCcEEEecC
Q 042303 365 SVLLPDGKVLIAGS 378 (519)
Q Consensus 365 a~LlpdG~V~v~GG 378 (519)
+ ..++|++|+++.
T Consensus 211 ~-~~~~g~~~~~~~ 223 (327)
T 2xbg_A 211 G-FTPDGRLWMIVN 223 (327)
T ss_dssp E-ECTTSCEEEEET
T ss_pred E-ECCCCCEEEEeC
Confidence 5 468999998875
No 185
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=81.99 E-value=45 Score=33.55 Aligned_cols=66 Identities=14% Similarity=0.014 Sum_probs=34.4
Q ss_pred cCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCCCC
Q 042303 309 PTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDG 383 (519)
Q Consensus 309 pdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~ 383 (519)
-||+||..|-...|.-+.... .....+-|..-....+..++ .-.+|+++ |.-||+||..|.+..+.
T Consensus 260 ~~g~v~~wG~n~~gqlg~~~~----~~~~~~~p~~~~~~~v~~ia----~G~~ht~a-lt~~G~v~~wG~n~~Gq 325 (423)
T 3mvd_K 260 QTQVIWATGLNNFKQLAHETK----GKEFALTPIKTELKDIRHIA----GGQHHTVI-LTTDLKCSVVGRPEYGR 325 (423)
T ss_dssp TTCCEEEEEECTTCTTSSCCT----TCSEEEEEEEECCCSEEEEE----ECSSEEEE-EETTCCEEEEECCGGGT
T ss_pred CCCeEEEEeCCCCCcCCCCCC----CCceeeeeEEcCCCCeEEEE----cccCeEEE-EeCCCcEEEEECCCCCC
Confidence 699999998655443222110 01122222211011344332 22456654 56899999999876543
No 186
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=81.29 E-value=41 Score=32.63 Aligned_cols=58 Identities=14% Similarity=0.094 Sum_probs=35.2
Q ss_pred EEecCCcEEEEcCcCCCCCCccCCCCCccc-cEEEeCCCCCccee-eecCCCCcCCccceeeeEcCCCcEEEecCCC
Q 042303 306 TILPTGDVLLVNGAQNGTSAWNDAEEPALA-PALYKTKEKRHHRF-QELAPTTIPRMYHSVSVLLPDGKVLIAGSNT 380 (519)
Q Consensus 306 vvLpdG~V~viGG~~~g~~g~~~~~~~~~~-~e~YdP~t~~g~~W-~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 380 (519)
..-|||+.++.|+.+. + +.+||..+. +- ..+..-.....-. ....-|||+.+++|+..
T Consensus 202 ~~s~~g~~l~s~s~d~-------------~~v~iwd~~~~---~~~~~~~~g~h~~~v~-~~~~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 202 RLNRKSDMVATCSQDG-------------TIIRVFKTEDG---VLVREFRRGLDRADVV-DMKWSTDGSKLAVVSDK 261 (355)
T ss_dssp EECTTSSEEEEEETTC-------------SEEEEEETTTC---CEEEEEECTTCCSCEE-EEEECTTSCEEEEEETT
T ss_pred EECCCCCEEEEEeCCC-------------CEEEEEECCCC---cEEEEEEcCCCCCcEE-EEEECCCCCEEEEEECC
Confidence 4568999999988641 4 689998876 32 1221000111111 23356899999999864
No 187
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=79.10 E-value=8.9 Score=36.00 Aligned_cols=102 Identities=10% Similarity=0.095 Sum_probs=54.6
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcceeecee-EEec--CCcEEEEcCcCCCCC
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRVMGDM-TILP--TGDVLLVNGAQNGTS 324 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~-vvLp--dG~V~viGG~~~g~~ 324 (519)
+++++++|+.+ ..+..+|+......++.. .+........+ ...+ |++++++|+.+ |
T Consensus 22 ~~~~l~~~~~d-----------------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-g-- 81 (351)
T 3f3f_A 22 YGRHVATCSSD-----------------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-K-- 81 (351)
T ss_dssp SSSEEEEEETT-----------------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-S--
T ss_pred CCCEEEEeeCC-----------------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-C--
Confidence 67778887764 135567766434445443 22211111122 2345 69999998864 1
Q ss_pred CccCCCCCccccEEEeCCCCC----cceeeecCCCCcCCccceeeeEcCC--CcEEEecCCC
Q 042303 325 AWNDAEEPALAPALYKTKEKR----HHRFQELAPTTIPRMYHSVSVLLPD--GKVLIAGSNT 380 (519)
Q Consensus 325 g~~~~~~~~~~~e~YdP~t~~----g~~W~~~~~~~~~R~yhs~a~Llpd--G~V~v~GG~~ 380 (519)
.+.+||..+.. +.+|..+.........-......|+ ++.+++|+..
T Consensus 82 ----------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 133 (351)
T 3f3f_A 82 ----------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND 133 (351)
T ss_dssp ----------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ----------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC
Confidence 46789987752 1233333322211222223445788 9988888754
No 188
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=77.10 E-value=40 Score=31.76 Aligned_cols=26 Identities=12% Similarity=0.123 Sum_probs=20.4
Q ss_pred EeeCCcEEEEeCCceEEeeCCCCeEE
Q 042303 189 LVTDGNLFIFSNNRSILFDPKANRVI 214 (519)
Q Consensus 189 ~~~~G~Ifv~Gg~~~~~yDp~t~~w~ 214 (519)
..++|++++.......+||++++++.
T Consensus 61 ~~~dG~l~v~~~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 61 LRQSGGYVATIGTKFCALNWKEQSAV 86 (297)
T ss_dssp EBTTSSEEEEETTEEEEEETTTTEEE
T ss_pred ECCCCCEEEEECCeEEEEECCCCcEE
Confidence 34689988877666788999998865
No 189
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=75.27 E-value=52 Score=30.42 Aligned_cols=62 Identities=13% Similarity=0.214 Sum_probs=38.5
Q ss_pred cCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCC-ccccceEEEcCCCcEEEEcCCCCCceEEe-CCC
Q 042303 78 VDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAE-PRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQ 147 (519)
Q Consensus 78 ~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~-~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~ 147 (519)
.++ +|.+|. .++++++|.. +.+....-. +.. ..+-.+++..++|+.++.|+.+ .++.+| ..+
T Consensus 35 ~~~-~lAvg~----D~tV~iWd~~-tg~~~~~~~-~~~~~~~V~~v~~~~~~~~l~sgs~D-g~v~iw~~~~ 98 (318)
T 4ggc_A 35 SGN-VLAVAL----DNSVYLWSAS-SGDILQLLQ-MEQPGEYISSVAWIKEGNYLAVGTSS-AEVQLWDVQQ 98 (318)
T ss_dssp TTS-EEEEEE----TTEEEEEETT-TCCEEEEEE-CCSTTCCEEEEEECTTSSEEEEEETT-SEEEEEETTT
T ss_pred CCC-EEEEEe----CCEEEEEECC-CCCEEEEEE-ecCCCCeEEEEEECCCCCEEEEEECC-CcEEEeecCC
Confidence 344 666663 2579999987 665543321 322 2333456667899999999876 456677 443
No 190
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=73.75 E-value=1.1e+02 Score=33.33 Aligned_cols=132 Identities=13% Similarity=0.098 Sum_probs=65.1
Q ss_pred eCCcEEEEeC--CceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCccccccc
Q 042303 191 TDGNLFIFSN--NRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAED 268 (519)
Q Consensus 191 ~~G~Ifv~Gg--~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~ 268 (519)
.+|+|+++++ ....+||++++++.. +.. ....... .-.+++. ..+|.|.+.. .. |
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~~-~~~-~~~~~~~--~~~~i~~----------d~~g~lWigt-~~-G------- 537 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVTK-LFA-DELTGEK--SPNYLLC----------DEDGLLWVGF-HG-G------- 537 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEEE-ECT-TTSCGGG--CEEEEEE----------CTTSCEEEEE-TT-E-------
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceEE-ecC-CCcCCCc--ccceEEE----------CCCCCEEEEe-cC-c-------
Confidence 3689988443 346789999998763 421 1000000 0112221 1368888643 21 1
Q ss_pred ccccccCCCceEEEEecCCCCceEec---cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCC
Q 042303 269 KKQFWPALQDCGRIRITEPNPVWKKE---MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKR 345 (519)
Q Consensus 269 ~~~~~~a~~s~~~~d~~~~~~~W~~~---~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~ 345 (519)
..+||+. +.+++.. .++.... .+++-.+|+|++... .| ..+|||++.
T Consensus 538 ----------l~~~~~~--~~~~~~~~~~gl~~~~i--~~i~~~~g~lWi~t~--~G-------------l~~~~~~~~- 587 (758)
T 3ott_A 538 ----------VMRINPK--DESQQSISFGSFSNNEI--LSMTCVKNSIWVSTT--NG-------------LWIIDRKTM- 587 (758)
T ss_dssp ----------EEEECC----CCCCBCCCCC---CCE--EEEEEETTEEEEEES--SC-------------EEEEETTTC-
T ss_pred ----------eEEEecC--CCceEEecccCCCccce--EEEEECCCCEEEECC--CC-------------eEEEcCCCc-
Confidence 2356654 2333221 3332211 223345788887542 22 368999998
Q ss_pred cceeeecCCCCcCCccceeeeEcCCCcEEEecCC
Q 042303 346 HHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 346 g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
++.... ++... ..+.+....||++|++|-+
T Consensus 588 --~~~~~~-~~~~~-~~~~~~~~~~G~l~fG~~~ 617 (758)
T 3ott_A 588 --DARQQN-MTNKR-FTSLLFDPKEDCVYLGGAD 617 (758)
T ss_dssp --CEEEC---CCCC-CSEEEEETTTTEEEEECBS
T ss_pred --eeEEec-CCCCc-eeeeEEECCCCcEEEecCC
Confidence 776542 11111 2234444579999998754
No 191
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=73.26 E-value=28 Score=33.03 Aligned_cols=137 Identities=15% Similarity=0.019 Sum_probs=70.0
Q ss_pred EEEEECCCCcEEECccCC----CcccCCCeeccCCeEEEe----cCCC----------CCCceEEEEeCCCCCccccCCC
Q 042303 50 SVLFDIETAKLKPLKIQT----DTWCSSGGLTVDGHLVGT----GGYQ----------GGANTVRYLWTCDTCDWIEYPT 111 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~----~~~c~~~~~l~dG~llv~----GG~~----------~g~~~v~~ydp~~~~~W~~~~~ 111 (519)
...||+. ++++.+.... .......++.+||+++++ |-.. .+...+..||+. +.++..+.
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~-~g~~~~~~- 185 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD-GSPLQRMA- 185 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS-SCCCEEEE-
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC-CCcEEEEe-
Confidence 4467775 6666553211 112334566779999996 4321 123578899997 56665432
Q ss_pred CCCCccccceEEEcCCCc-EEEEcCCC----CCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccc
Q 042303 112 ALAEPRWYSTQVTLPDGG-FIVVGGRG----AFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYP 185 (519)
Q Consensus 112 ~m~~~R~y~s~~~L~dG~-V~viGG~~----~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp 185 (519)
.+..+ ...+.-+||+ +|+..-.. ...+..| ...+... ........ ..-+|
T Consensus 186 ~~~~p---~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~----~~~~~~~~-----------------~~~~p 241 (305)
T 3dr2_A 186 DLDHP---NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALH----DRRHFASV-----------------PDGLP 241 (305)
T ss_dssp EESSE---EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEE----EEEEEECC-----------------SSSCC
T ss_pred cCCCC---cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCcc----CCeEEEEC-----------------CCCCC
Confidence 13222 2445557887 66654321 1345555 3221100 00000000 00012
Q ss_pred e-EEEeeCCcEEEEeCCceEEeeCCCCeE
Q 042303 186 F-VNLVTDGNLFIFSNNRSILFDPKANRV 213 (519)
Q Consensus 186 ~-~~~~~~G~Ifv~Gg~~~~~yDp~t~~w 213 (519)
. ..+-.+|+||+..+....+||+.....
T Consensus 242 dgi~~d~~G~lwv~~~~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSSGTGVCVFDSDGQLL 270 (305)
T ss_dssp CSEEECTTSCEEECCSSEEEEECTTSCEE
T ss_pred CeEEECCCCCEEEecCCcEEEECCCCCEE
Confidence 2 234468999988766688999976543
No 192
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=72.76 E-value=37 Score=32.56 Aligned_cols=29 Identities=7% Similarity=0.129 Sum_probs=21.8
Q ss_pred EeeCCcEEEEeCCc--eEEeeCCCCeEEEEc
Q 042303 189 LVTDGNLFIFSNNR--SILFDPKANRVIREY 217 (519)
Q Consensus 189 ~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~ 217 (519)
...++++|+..|.. ...+|+++++..+.+
T Consensus 61 ~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~ 91 (268)
T 3nok_A 61 VFHQGHFFESTGHQGTLRQLSLESAQPVWME 91 (268)
T ss_dssp EEETTEEEEEETTTTEEEECCSSCSSCSEEE
T ss_pred EEECCEEEEEcCCCCEEEEEECCCCcEEeEE
Confidence 34578899888864 667999999876555
No 193
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=72.48 E-value=12 Score=36.15 Aligned_cols=100 Identities=10% Similarity=0.027 Sum_probs=53.5
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCc-ceeeceeEEecCCcEEEEcCcCCCCCCc
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPT-RRVMGDMTILPTGDVLLVNGAQNGTSAW 326 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~-~R~~~~~vvLpdG~V~viGG~~~g~~g~ 326 (519)
+++.++.|+.+ .++..+|+......++.. .+.. ...-.+...-|||++++.|+.+.
T Consensus 118 ~g~~las~s~D-----------------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~----- 175 (330)
T 2hes_X 118 DGYYLATCSRD-----------------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD----- 175 (330)
T ss_dssp TSCEEEEEETT-----------------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-----
T ss_pred CCCEEEEEeCC-----------------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-----
Confidence 67788888765 234566764222334433 2221 11111223458999999988641
Q ss_pred cCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCC--CcEEEecCCCC
Q 042303 327 NDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPD--GKVLIAGSNTH 381 (519)
Q Consensus 327 ~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~Llpd--G~V~v~GG~~~ 381 (519)
++.+||..++ .|..+..+.--...-.....-|+ +..++.|+...
T Consensus 176 --------~i~iW~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 176 --------TVRIWKDYDD---DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp --------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred --------eEEEEECCCC---CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 4678998777 66554332211111112234567 67788887543
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=70.49 E-value=68 Score=29.74 Aligned_cols=68 Identities=9% Similarity=-0.086 Sum_probs=38.6
Q ss_pred CCeeccCCe-EEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCC
Q 042303 73 SGGLTVDGH-LVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQ 149 (519)
Q Consensus 73 ~~~~l~dG~-llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~ 149 (519)
+-+..++|+ ||+++.. ...+..||+. +. ..... ... ..-.+.+.-+||++|+.... ...+.+| +.+++
T Consensus 32 g~~~d~~g~~l~~~~~~---~~~i~~~~~~-~~-~~~~~--~~~-~~~~~l~~~~dg~l~v~~~~-~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVR---QNRTWAWSDD-GQ-LSPEM--HPS-HHQNGHCLNKQGHLIACSHG-LRRLERQREPGGE 101 (296)
T ss_dssp EEEEEGGGTEEEEEEGG---GTEEEEEETT-SC-EEEEE--SSC-SSEEEEEECTTCCEEEEETT-TTEEEEECSTTCC
T ss_pred CCeEeCCCCEEEEEeCC---CCEEEEEECC-CC-eEEEE--CCC-CCcceeeECCCCcEEEEecC-CCeEEEEcCCCCc
Confidence 345556776 7777643 2478899997 55 43332 111 11224445578999887532 2356677 65553
No 195
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=69.17 E-value=54 Score=33.29 Aligned_cols=141 Identities=9% Similarity=0.027 Sum_probs=72.3
Q ss_pred cceEEEee---CCcEEEEeC-CceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEecccccccCCccccCCe-EEEEcCC
Q 042303 184 YPFVNLVT---DGNLFIFSN-NRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSD-ILVCGGA 258 (519)
Q Consensus 184 yp~~~~~~---~G~Ifv~Gg-~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gk-I~v~GG~ 258 (519)
+|...++. +|+||+.-. ....++|+.+++... +.. .. ..| .+.++ . .+++ ||++.-.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~--~~--~~P-~~ia~--d----------~~G~~lyvad~~ 199 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYS--GL--SKV-RTICW--T----------HEADSMIITNDQ 199 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EEC--CC--SCE-EEEEE--C----------TTSSEEEEEECC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-Eec--CC--CCc-ceEEE--e----------CCCCEEEEEeCC
Confidence 45444443 588998754 456689999988653 322 11 111 12222 1 2455 8888643
Q ss_pred CCCcccccccccccccCCCceEEEEecCCCCceE---ec-cCCcceeeceeEEec-CCcEEEEcCcCCCCCCccCCCCCc
Q 042303 259 AWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWK---KE-MMPTRRVMGDMTILP-TGDVLLVNGAQNGTSAWNDAEEPA 333 (519)
Q Consensus 259 ~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~---~~-~M~~~R~~~~~vvLp-dG~V~viGG~~~g~~g~~~~~~~~ 333 (519)
.. .. ...+..++.. ..|. .. .+..+ +..++-| +|.||+.--..
T Consensus 200 ~~-~~------------~~~v~~~~~~---g~~~~~~~l~~~~~p---~giavdp~~g~lyv~d~~~------------- 247 (430)
T 3tc9_A 200 NN-ND------------RPNNYILTRE---SGFKVITELTKGQNC---NGAETHPINGELYFNSWNA------------- 247 (430)
T ss_dssp SC-TT------------SEEEEEEEGG---GTSCSEEEEEECSSC---CCEEECTTTCCEEEEETTT-------------
T ss_pred CC-cc------------cceEEEEeCC---CceeeeeeeccCCCc---eEEEEeCCCCEEEEEECCC-------------
Confidence 21 10 1123334432 2332 22 33333 3445667 89999975221
Q ss_pred cccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCc-EEEecC
Q 042303 334 LAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGK-VLIAGS 378 (519)
Q Consensus 334 ~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~-V~v~GG 378 (519)
..+.+||+.+....++..+.....|+ + .++-|||+ +|++-.
T Consensus 248 ~~V~~~~~~~~~~~~~~~~~~~~~P~---g-ia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 248 GQVFRYDFTTQETTPLFTIQDSGWEF---H-IQFHPSGNYAYIVVV 289 (430)
T ss_dssp TEEEEEETTTTEEEEEEECSSSSCCE---E-EEECTTSSEEEEEET
T ss_pred CEEEEEECCCCcEEEEEEcCCCCcce---e-EEEcCCCCEEEEEEC
Confidence 15789999876211122222222333 2 34578998 899843
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=69.11 E-value=97 Score=30.98 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=22.2
Q ss_pred cceEEEe-eCCcEEEEeC--CceEEeeCCCCeEE
Q 042303 184 YPFVNLV-TDGNLFIFSN--NRSILFDPKANRVI 214 (519)
Q Consensus 184 yp~~~~~-~~G~Ifv~Gg--~~~~~yDp~t~~w~ 214 (519)
+|+..++ ++|+||+... ....+||+.+++..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~ 165 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT 165 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE
Confidence 3444444 7899999865 45778999988755
No 197
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=68.08 E-value=1e+02 Score=33.58 Aligned_cols=135 Identities=9% Similarity=0.043 Sum_probs=72.2
Q ss_pred EEEECCCCcEEECccCC-----CcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCC--CCCCccccceEE
Q 042303 51 VLFDIETAKLKPLKIQT-----DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPT--ALAEPRWYSTQV 123 (519)
Q Consensus 51 ~~yDp~t~~w~~l~~~~-----~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~--~m~~~R~y~s~~ 123 (519)
..||+.+++|+...... ...........+|+|++..- . ..+.+||+. +.++..... .++... -.+..
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~---~Gl~~~~~~-~~~~~~~~~~~~l~~~~-i~~i~ 545 (781)
T 3v9f_A 472 FVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G---GGVGIYTPD-MQLVRKFNQYEGFCSNT-INQIY 545 (781)
T ss_dssp EEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S---SCEEEECTT-CCEEEEECTTTTCSCSC-EEEEE
T ss_pred EEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C---CCEEEEeCC-CCeEEEccCCCCCCCCe-eEEEE
Confidence 46899988887654322 11222223445788877531 1 236778987 666655431 133222 12333
Q ss_pred EcCCCcEEEEcCCCCCce-EEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC
Q 042303 124 TLPDGGFIVVGGRGAFSY-EYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN 201 (519)
Q Consensus 124 ~L~dG~V~viGG~~~~~~-E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~ 201 (519)
.-.+|++++... ... -.| |.++++. .... .+ | .+.+..-....-.+|+|++.+..
T Consensus 546 ~d~~g~lWi~T~---~Glv~~~d~~~~~~~----~~~~----~~---g---------l~~~~i~~i~~d~~g~lW~~t~~ 602 (781)
T 3v9f_A 546 RSSKGQMWLATG---EGLVCFPSARNFDYQ----VFQR----KE---G---------LPNTHIRAISEDKNGNIWASTNT 602 (781)
T ss_dssp ECTTSCEEEEET---TEEEEESCTTTCCCE----EECG----GG---T---------CSCCCCCEEEECSSSCEEEECSS
T ss_pred ECCCCCEEEEEC---CCceEEECCCCCcEE----Eccc----cC---C---------CCCceEEEEEECCCCCEEEEcCC
Confidence 435788887543 223 566 6665442 1110 00 0 01111111223357999998877
Q ss_pred ceEEeeCCCCeEE
Q 042303 202 RSILFDPKANRVI 214 (519)
Q Consensus 202 ~~~~yDp~t~~w~ 214 (519)
...+|||++.++.
T Consensus 603 Gl~~~~~~~~~~~ 615 (781)
T 3v9f_A 603 GISCYITSKKCFY 615 (781)
T ss_dssp CEEEEETTTTEEE
T ss_pred ceEEEECCCCceE
Confidence 7889999998865
No 198
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=63.69 E-value=54 Score=31.78 Aligned_cols=61 Identities=8% Similarity=0.077 Sum_probs=35.8
Q ss_pred EEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCC---------------ccc---eeeeE
Q 042303 306 TILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPR---------------MYH---SVSVL 367 (519)
Q Consensus 306 vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R---------------~yh---s~a~L 367 (519)
..-|||+.++.|+.+. ++.+||...+...++..+..+-.++ ..+ .....
T Consensus 247 ~~s~~~~~l~s~s~d~-------------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 313 (355)
T 3vu4_A 247 KWSTDGSKLAVVSDKW-------------TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAW 313 (355)
T ss_dssp EECTTSCEEEEEETTC-------------EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEE
T ss_pred EECCCCCEEEEEECCC-------------EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEE
Confidence 4568999999987641 4678887665333444433311111 011 23345
Q ss_pred cCCCcEEEecCC
Q 042303 368 LPDGKVLIAGSN 379 (519)
Q Consensus 368 lpdG~V~v~GG~ 379 (519)
-+||+.+++|+.
T Consensus 314 ~~d~~~l~~~~~ 325 (355)
T 3vu4_A 314 ISESSLVVVWPH 325 (355)
T ss_dssp SSSSEEEEEETT
T ss_pred eCCCCEEEEEeC
Confidence 689988888875
No 199
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=62.13 E-value=45 Score=31.40 Aligned_cols=54 Identities=15% Similarity=0.111 Sum_probs=33.3
Q ss_pred EEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCc--CCccceeeeEcCCCcEEEec
Q 042303 306 TILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTI--PRMYHSVSVLLPDGKVLIAG 377 (519)
Q Consensus 306 vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~--~R~yhs~a~LlpdG~V~v~G 377 (519)
+.-+||++++..+ . .+.+||++++ +++.+..... +........+-|||++|++-
T Consensus 60 ~~~~dG~l~v~~~--~-------------~l~~~d~~~g---~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~ 115 (297)
T 3g4e_A 60 ALRQSGGYVATIG--T-------------KFCALNWKEQ---SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGT 115 (297)
T ss_dssp EEBTTSSEEEEET--T-------------EEEEEETTTT---EEEEEEECCTTCSSEEEEEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEEC--C-------------eEEEEECCCC---cEEEEEecCCCCCCCCCCCEEECCCCCEEEec
Confidence 4568999776431 1 3578999998 7766543321 21212234457999999864
No 200
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=61.68 E-value=2e+02 Score=32.06 Aligned_cols=106 Identities=8% Similarity=0.065 Sum_probs=56.7
Q ss_pred eeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCc
Q 042303 75 GLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQ 153 (519)
Q Consensus 75 ~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~ 153 (519)
++-+||+++++|+.+ ..+++||.. +.+-.. . +.....-.+++-.+ |+.++.|+.+ .++.+| ..+.+-
T Consensus 24 afspdg~~lAsgs~D---g~I~lw~~~-~~~~~~--~-~~~~~~V~~l~fsp-g~~L~S~s~D-~~v~lWd~~~~~~--- 91 (902)
T 2oaj_A 24 AFDFTQNLLAIATVT---GEVHIYGQQ-QVEVVI--K-LEDRSAIKEMRFVK-GIYLVVINAK-DTVYVLSLYSQKV--- 91 (902)
T ss_dssp EEETTTTEEEEEETT---SEEEEECST-TCEEEE--E-CSSCCCEEEEEEET-TTEEEEEETT-CEEEEEETTTCSE---
T ss_pred EECCCCCEEEEEeCC---CEEEEEeCC-CcEEEE--E-cCCCCCEEEEEEcC-CCEEEEEECc-CeEEEEECCCCcE---
Confidence 455689999998854 478899865 332211 1 22222223344444 7866666654 567777 444311
Q ss_pred ccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC--ceEEeeCCCCeE
Q 042303 154 SIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN--RSILFDPKANRV 213 (519)
Q Consensus 154 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~--~~~~yDp~t~~w 213 (519)
...+.. . .... .+...++|+.++.|.. ...+||..+.+.
T Consensus 92 ---~~~~~~--~---------------~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 92 ---LTTVFV--P---------------GKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp ---EEEEEC--S---------------SCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred ---EEEEcC--C---------------CCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 111100 0 0000 1222368888888765 367899988764
No 201
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=59.38 E-value=99 Score=27.68 Aligned_cols=92 Identities=11% Similarity=-0.000 Sum_probs=52.0
Q ss_pred eeEEEEECCC-CcEEECccCCC-cccCCCeeccCCeEEEecCCC-CCCceEEEEeCCCCCccccCCCCCCCccccceEEE
Q 042303 48 AHSVLFDIET-AKLKPLKIQTD-TWCSSGGLTVDGHLVGTGGYQ-GGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVT 124 (519)
Q Consensus 48 ~~~~~yDp~t-~~w~~l~~~~~-~~c~~~~~l~dG~llv~GG~~-~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~ 124 (519)
....+||..+ ++...+..... .........+||+.+++++.. ++...+..+|.. +.....+.. .. . ....+.
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~~~-~~--~-~~~~~~ 136 (297)
T 2ojh_A 62 GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST-GGTPRLMTK-NL--P-SYWHGW 136 (297)
T ss_dssp TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT-CCCCEECCS-SS--S-EEEEEE
T ss_pred CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC-CCceEEeec-CC--C-ccceEE
Confidence 3556899998 87776654332 233345677899888887743 345678888876 444333322 11 1 233445
Q ss_pred cCCCcEEEEcCCCCCceEEe
Q 042303 125 LPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 125 L~dG~V~viGG~~~~~~E~y 144 (519)
-+||+.+++.+.....+.+|
T Consensus 137 spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 137 SPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp CTTSSEEEEEEEETTEEEEE
T ss_pred CCCCCEEEEEECCCCceEEE
Confidence 56888666333222334454
No 202
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=58.69 E-value=1.4e+02 Score=29.12 Aligned_cols=22 Identities=14% Similarity=0.292 Sum_probs=15.4
Q ss_pred EeeCCcEEEEeCC-ceEEeeCCC
Q 042303 189 LVTDGNLFIFSNN-RSILFDPKA 210 (519)
Q Consensus 189 ~~~~G~Ifv~Gg~-~~~~yDp~t 210 (519)
..++|++++.|.. ...+||..+
T Consensus 185 ~~~~~~~l~s~~d~~i~iwd~~~ 207 (447)
T 3dw8_B 185 INSDYETYLSADDLRINLWHLEI 207 (447)
T ss_dssp ECTTSSEEEEECSSEEEEEETTE
T ss_pred EcCCCCEEEEeCCCeEEEEECCC
Confidence 3468999988832 256789884
No 203
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=58.38 E-value=47 Score=33.41 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=38.6
Q ss_pred eceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 302 MGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 302 ~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
.|..++.-||+||..|-...|.-|..+. .....+..-+...+ .+...++ .-.+|+++ |..||+||.-|.+..
T Consensus 235 ~ht~~l~~~G~v~~wG~n~~GqlG~g~~-~~~~~p~~v~~~~~--~~v~~i~----~G~~hs~a-lt~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 235 RHTISVSYSGALYTYGWSKYGQLGHGDL-EDHLIPHKLEALSN--SFISQIS----GGWRHTMA-LTSDGKLYGWGWNKF 306 (406)
T ss_dssp SEEEEEETTCCEEEEECCTTSTTCSSSC-CCEEEEEECGGGTT--SCEEEEE----ECSSEEEE-EETTSCEEEEECCTT
T ss_pred CcEEEEcCCCCEEEeeCCCCCCCCCCCC-cCccccEEecccCC--CCEEEEE----ecCCEEEE-EcCCCeEEEeeCCCC
Confidence 4566677899999999655443322111 11111111111011 1222222 12357655 568999999998866
Q ss_pred CC
Q 042303 382 DG 383 (519)
Q Consensus 382 ~~ 383 (519)
+.
T Consensus 307 Gq 308 (406)
T 4d9s_A 307 GQ 308 (406)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 204
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=57.29 E-value=1.3e+02 Score=28.39 Aligned_cols=92 Identities=9% Similarity=0.007 Sum_probs=42.2
Q ss_pred ceEEEEecCCC-CceEec-cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCC
Q 042303 278 DCGRIRITEPN-PVWKKE-MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPT 355 (519)
Q Consensus 278 s~~~~d~~~~~-~~W~~~-~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~ 355 (519)
.+.+|++.... ..++.. .++.++ +.++-++|+|||........ . ........+.+|||+.. ....+..
T Consensus 208 ~I~~~~~~~~~~~~~~~~~~~~gP~---gi~~d~~G~l~va~~~~~~~--~-~~~~~~~~v~~~d~~G~---~~~~~~~- 277 (322)
T 2fp8_A 208 QIVKYWLEGPKKGTAEVLVKIPNPG---NIKRNADGHFWVSSSEELDG--N-MHGRVDPKGIKFDEFGN---ILEVIPL- 277 (322)
T ss_dssp EEEEEESSSTTTTCEEEEEECSSEE---EEEECTTSCEEEEEEEETTS--S-TTSCEEEEEEEECTTSC---EEEEEEC-
T ss_pred eEEEEECCCCcCCccceEEeCCCCC---CeEECCCCCEEEEecCcccc--c-ccCCCccEEEEECCCCC---EEEEEEC-
Confidence 45667765211 223332 333232 33556789999986431000 0 00000124678998754 3333321
Q ss_pred CcCC-ccceeeeEcCCCcEEEecCC
Q 042303 356 TIPR-MYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 356 ~~~R-~yhs~a~LlpdG~V~v~GG~ 379 (519)
+... ..+.+++...+|++||+...
T Consensus 278 ~~g~~~~~~~~~~~~~g~L~v~~~~ 302 (322)
T 2fp8_A 278 PPPFAGEHFEQIQEHDGLLYIGTLF 302 (322)
T ss_dssp CTTTTTSCCCEEEEETTEEEEECSS
T ss_pred CCCCccccceEEEEeCCEEEEeecC
Confidence 1100 11222333469999998643
No 205
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=53.38 E-value=2.1e+02 Score=29.58 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=29.3
Q ss_pred cCCeEEEecCCCCCCceEEEEeCCCCC----ccccCC--CCCC--Cc-cccceEEEcCCCcEEEE
Q 042303 78 VDGHLVGTGGYQGGANTVRYLWTCDTC----DWIEYP--TALA--EP-RWYSTQVTLPDGGFIVV 133 (519)
Q Consensus 78 ~dG~llv~GG~~~g~~~v~~ydp~~~~----~W~~~~--~~m~--~~-R~y~s~~~L~dG~V~vi 133 (519)
.+++-+++.|.. ...+.+||.. ++ +-...- .++. .. .+-|+..+++|| |||.
T Consensus 93 ~~r~~l~v~~l~--s~~I~viD~~-t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs 153 (462)
T 2ece_A 93 IERRFLIVPGLR--SSRIYIIDTK-PNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYIS 153 (462)
T ss_dssp CCSCEEEEEBTT--TCCEEEEECC-SCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEE
T ss_pred ccCCEEEEccCC--CCeEEEEECC-CCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEE
Confidence 567777766643 4678999965 33 111100 0111 11 245778888999 8874
No 206
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=53.34 E-value=1.5e+02 Score=27.92 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=31.2
Q ss_pred EEecCCc-EEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCC
Q 042303 306 TILPTGD-VLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 306 vvLpdG~-V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
++-+||+ |||..-.. ..+.+||.....-.+++.+..++-| .+. .+-+||+|||+-..
T Consensus 191 a~~~dg~~lyv~d~~~-------------~~I~~~~~~~~~~~~~~~~~~~~gP---~gi-~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 191 EVSADSSFVLVAEFLS-------------HQIVKYWLEGPKKGTAEVLVKIPNP---GNI-KRNADGHFWVSSSE 248 (322)
T ss_dssp EECTTSSEEEEEEGGG-------------TEEEEEESSSTTTTCEEEEEECSSE---EEE-EECTTSCEEEEEEE
T ss_pred EECCCCCEEEEEeCCC-------------CeEEEEECCCCcCCccceEEeCCCC---CCe-EECCCCCEEEEecC
Confidence 4567887 77763221 1467888875321133333222112 233 45789999998654
No 207
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=53.27 E-value=1.8e+02 Score=28.72 Aligned_cols=69 Identities=1% Similarity=-0.179 Sum_probs=36.6
Q ss_pred CeeccCCe-EEEecCCCCCCceEEEEeCCCCC---ccccCC-CCCC-CccccceEEEcC-CCcEEEEcCCCCCceEEe-C
Q 042303 74 GGLTVDGH-LVGTGGYQGGANTVRYLWTCDTC---DWIEYP-TALA-EPRWYSTQVTLP-DGGFIVVGGRGAFSYEYI-P 145 (519)
Q Consensus 74 ~~~l~dG~-llv~GG~~~g~~~v~~ydp~~~~---~W~~~~-~~m~-~~R~y~s~~~L~-dG~V~viGG~~~~~~E~y-P 145 (519)
....+++. ++++|+.. ..+.+||.. +. .+.... ..+. ....-.+++..+ ++.+|+.|+.+ ..+.+| .
T Consensus 187 l~~~~~~~~~l~s~~~d---g~i~vwd~~-~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-g~i~i~d~ 261 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDD---HTICLWDIN-ATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-QKLMIWDT 261 (430)
T ss_dssp EEECTTSTTEEEEECTT---SCEEEEETT-SCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-SEEEEEET
T ss_pred EEeCCCCCCeEEEEeCC---CeEEEEeCC-CCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-CeEEEEEC
Confidence 34456676 88888753 468889876 31 121100 0011 111222344444 67888888765 356677 4
Q ss_pred CC
Q 042303 146 PQ 147 (519)
Q Consensus 146 ~~ 147 (519)
.+
T Consensus 262 ~~ 263 (430)
T 2xyi_A 262 RN 263 (430)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=52.68 E-value=1.9e+02 Score=28.97 Aligned_cols=51 Identities=22% Similarity=0.050 Sum_probs=30.2
Q ss_pred eEEEEECCCCcEEE-CccCC------CcccCCCeeccCCe-EEEecCCCCCCceEEEEeCC
Q 042303 49 HSVLFDIETAKLKP-LKIQT------DTWCSSGGLTVDGH-LVGTGGYQGGANTVRYLWTC 101 (519)
Q Consensus 49 ~~~~yDp~t~~w~~-l~~~~------~~~c~~~~~l~dG~-llv~GG~~~g~~~v~~ydp~ 101 (519)
....||++|.+-.. +.... ........+.+||+ +|+.... ..+.+.++|..
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~--~~~~VsVID~~ 168 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS--PAPAVGVVDLE 168 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS--SSCEEEEEETT
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC--CCCeEEEEECC
Confidence 35679999998643 32211 12344556778986 4554221 23578888876
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=50.87 E-value=1.6e+02 Score=27.48 Aligned_cols=68 Identities=13% Similarity=0.280 Sum_probs=35.7
Q ss_pred eeEEecCCcEEEEc---CcCCCCCCcc-CCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCc-EEEecC
Q 042303 304 DMTILPTGDVLLVN---GAQNGTSAWN-DAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGK-VLIAGS 378 (519)
Q Consensus 304 ~~vvLpdG~V~viG---G~~~g~~g~~-~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~-V~v~GG 378 (519)
+.++-+||+||+.- |......+.. ........+.+|||++. +++.+. ...+ -.+. .+-|||+ +|++..
T Consensus 135 ~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g---~~~~~~--~~~~-p~gl-~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 135 DLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS---PLQRMA--DLDH-PNGL-AFSPDEQTLYVSQT 207 (305)
T ss_dssp CEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC---CCEEEE--EESS-EEEE-EECTTSSEEEEEEC
T ss_pred CEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC---cEEEEe--cCCC-Ccce-EEcCCCCEEEEEec
Confidence 34677899999973 2210000000 00111235788999888 776554 2111 1233 3578998 677654
No 210
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=50.42 E-value=71 Score=30.49 Aligned_cols=50 Identities=12% Similarity=0.098 Sum_probs=29.7
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTC 101 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~ 101 (519)
...+||..+++....-..+........+.+||+.+++||.+ ..+++||..
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~ 148 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNIL 148 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESS
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEecc
Confidence 35578988876432111121112223456789999988854 568888865
No 211
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=49.97 E-value=1.8e+02 Score=29.39 Aligned_cols=32 Identities=9% Similarity=-0.040 Sum_probs=22.0
Q ss_pred cceEEEee----CCcEEEEeC-CceEEeeCCCCeEEE
Q 042303 184 YPFVNLVT----DGNLFIFSN-NRSILFDPKANRVIR 215 (519)
Q Consensus 184 yp~~~~~~----~G~Ifv~Gg-~~~~~yDp~t~~w~~ 215 (519)
.|...++- +|+||+.-. ....++|+.+++...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~ 176 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI 176 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE
Confidence 45555543 389998743 567789998888764
No 212
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=49.46 E-value=2.9e+02 Score=30.01 Aligned_cols=135 Identities=6% Similarity=0.034 Sum_probs=67.7
Q ss_pred EEEECCCCcEEECccCCCcccC----CCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCC-----CCCccccce
Q 042303 51 VLFDIETAKLKPLKIQTDTWCS----SGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTA-----LAEPRWYST 121 (519)
Q Consensus 51 ~~yDp~t~~w~~l~~~~~~~c~----~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~-----m~~~R~y~s 121 (519)
..||+.+++++.+......... ......+|+|++... ..+.+||+. +.+|...... +... .-.+
T Consensus 430 ~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-----~Gl~~~~~~-~~~~~~~~~~~~~~~~~~~-~i~~ 502 (795)
T 4a2l_A 430 SILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-----SALVRFNPE-QRSFTTIEKEKDGTPVVSK-QITT 502 (795)
T ss_dssp EEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-----SCEEEEETT-TTEEEECCBCTTCCBCCCC-CEEE
T ss_pred eEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-----CceeEEeCC-CCeEEEccccccccccCCc-eEEE
Confidence 3578888777765431111111 112234678777532 247889998 7788765420 1111 1223
Q ss_pred EEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceEE-EeeCCcEEEEe
Q 042303 122 QVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVN-LVTDGNLFIFS 199 (519)
Q Consensus 122 ~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~-~~~~G~Ifv~G 199 (519)
...-.+|++++... . .+-+| +.++++ . ....... .. ...+ +-... .-.+|+|++..
T Consensus 503 i~~d~~g~lWigt~-~--Gl~~~~~~~~~~-~---~~~~~~~--~~------------l~~~-~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 503 LFRDSHKRLWIGGE-E--GLSVFKQEGLDI-Q---KASILPV--SN------------VTKL-FTNCIYEASNGIIWVGT 560 (795)
T ss_dssp EEECTTCCEEEEES-S--CEEEEEEETTEE-E---ECCCSCS--CG------------GGGS-CEEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEEeC-C--ceEEEeCCCCeE-E---EecCCCC--CC------------CCCC-eeEEEEECCCCCEEEEe
Confidence 44446789988643 2 24445 544322 0 0000000 00 0000 00112 22578998876
Q ss_pred CCceEEeeCCCCeEE
Q 042303 200 NNRSILFDPKANRVI 214 (519)
Q Consensus 200 g~~~~~yDp~t~~w~ 214 (519)
.....+||++++++.
T Consensus 561 ~~Gl~~~d~~~~~~~ 575 (795)
T 4a2l_A 561 REGFYCFNEKDKQIK 575 (795)
T ss_dssp SSCEEEEETTTTEEE
T ss_pred CCCceeECCCCCcEE
Confidence 556778999999875
No 213
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=44.78 E-value=3e+02 Score=28.87 Aligned_cols=27 Identities=15% Similarity=0.288 Sum_probs=19.3
Q ss_pred EeeCCcEEEEeC--CceEEeeC-CCCe--EEE
Q 042303 189 LVTDGNLFIFSN--NRSILFDP-KANR--VIR 215 (519)
Q Consensus 189 ~~~~G~Ifv~Gg--~~~~~yDp-~t~~--w~~ 215 (519)
++.+|+||+... ....++|. ++++ |..
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~ 90 (571)
T 2ad6_A 59 LVIGDMMYVHSAFPNNTYALNLNDPGKIVWQH 90 (571)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCccEEEEE
Confidence 345899999876 34788998 7654 653
No 214
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=43.98 E-value=65 Score=31.70 Aligned_cols=99 Identities=12% Similarity=0.106 Sum_probs=50.6
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccC
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWND 328 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~ 328 (519)
+++++++|+.+ ..+..+|+......++...-+....-.+...-|+|+.+++|+.+ |
T Consensus 181 ~~~~l~~~~~d-----------------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-g------ 236 (437)
T 3gre_A 181 EKSLLVALTNL-----------------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-G------ 236 (437)
T ss_dssp SCEEEEEEETT-----------------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-S------
T ss_pred CCCEEEEEeCC-----------------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-C------
Confidence 57888888765 23556776531111221111111222233456899999998764 1
Q ss_pred CCCCccccEEEeCCCCCcceeee-cCCCCcCCccceee---eEcCCCcEEEecCCCC
Q 042303 329 AEEPALAPALYKTKEKRHHRFQE-LAPTTIPRMYHSVS---VLLPDGKVLIAGSNTH 381 (519)
Q Consensus 329 ~~~~~~~~e~YdP~t~~g~~W~~-~~~~~~~R~yhs~a---~LlpdG~V~v~GG~~~ 381 (519)
.+.+||..+. +... +......+ -.+.+ ..-+||+.+++|+..+
T Consensus 237 ------~i~iwd~~~~---~~~~~~~~~~~~~-v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 237 ------IIDIWDIRFN---VLIRSWSFGDHAP-ITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp ------CEEEEETTTT---EEEEEEBCTTCEE-EEEEEECTTTCTTEEEEEEESTTE
T ss_pred ------eEEEEEcCCc---cEEEEEecCCCCc-eEEEEeccccCCCccEEEEEcCCC
Confidence 4689998876 4321 11000000 01111 1126898999887643
No 215
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=43.87 E-value=99 Score=29.56 Aligned_cols=55 Identities=18% Similarity=0.103 Sum_probs=34.6
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeecc-CCeEEEecCCC-------------CCCceEEEEeCCCCCcccc
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTV-DGHLVGTGGYQ-------------GGANTVRYLWTCDTCDWIE 108 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~llv~GG~~-------------~g~~~v~~ydp~~~~~W~~ 108 (519)
..+||+.+++.+.+..... +. ....+ ||+++++.+.. .+...+.++|+. +.+...
T Consensus 266 l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~ 334 (396)
T 3c5m_A 266 IYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK-AKSAQK 334 (396)
T ss_dssp EEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT-TTBCCE
T ss_pred EEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc-cCceEE
Confidence 5678999888776654322 22 45567 99988775421 134678899987 555443
No 216
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=43.39 E-value=39 Score=33.75 Aligned_cols=18 Identities=17% Similarity=0.117 Sum_probs=15.1
Q ss_pred ccceEEEcCCCcEEEEcC
Q 042303 118 WYSTQVTLPDGGFIVVGG 135 (519)
Q Consensus 118 ~y~s~~~L~dG~V~viGG 135 (519)
.+|++++..||+||..|-
T Consensus 326 ~~h~~al~~~G~v~~wG~ 343 (389)
T 3kci_A 326 SLHCVCCTEDGEVYTWGD 343 (389)
T ss_dssp SSEEEEEETTCCEEEEEC
T ss_pred cCeEEEECCCCCEEEeeC
Confidence 467888888999999985
No 217
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=43.09 E-value=1.1e+02 Score=28.17 Aligned_cols=56 Identities=9% Similarity=0.075 Sum_probs=32.3
Q ss_pred EEecC-CcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeec-CCCC--cCCccceeeeEcCCCcEEEecCC
Q 042303 306 TILPT-GDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQEL-APTT--IPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 306 vvLpd-G~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~-~~~~--~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
+.-+| |++||..... .+.+||++ + +...+ .... .+........+.+||++|++...
T Consensus 77 ~~~~~~g~l~v~~~~~--------------~l~~~d~~-g---~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 136 (314)
T 1pjx_A 77 QCDRDANQLFVADMRL--------------GLLVVQTD-G---TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPA 136 (314)
T ss_dssp EECSSSSEEEEEETTT--------------EEEEEETT-S---CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECB
T ss_pred EEecCCCcEEEEECCC--------------CEEEEeCC-C---CEEEEEeccCCCccccCCcCEEECCCCCEEEEecC
Confidence 45578 9999875321 35789998 6 55544 2211 11111122345689999998753
No 218
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=42.76 E-value=3.2e+02 Score=29.03 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=19.2
Q ss_pred EeeCCcEEEEeC--CceEEeeC-CCCe--EEE
Q 042303 189 LVTDGNLFIFSN--NRSILFDP-KANR--VIR 215 (519)
Q Consensus 189 ~~~~G~Ifv~Gg--~~~~~yDp-~t~~--w~~ 215 (519)
++.+|+||+... ....++|. ++++ |..
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 59 LVVDGKMYIHTSFPNNTFALGLDDPGTILWQD 90 (599)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCCcEEEEE
Confidence 345899999876 35788999 7654 653
No 219
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=42.54 E-value=22 Score=37.23 Aligned_cols=88 Identities=13% Similarity=0.064 Sum_probs=53.3
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEE------
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQV------ 123 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~------ 123 (519)
..++|+.+++++.+.... ......+..+||+.++.+. .++...++++|.. +.+...+.. . .......+
T Consensus 177 i~~~d~~~g~~~~l~~~~-~~~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~-~~~~~~~~~-~--~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 177 LFTSNLSSGGLRVFDSGE-GSFSSASISPGMKVTAGLE-TAREARLVTVDPR-DGSVEDLEL-P--SKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEETTTCCCEEECCSS-CEEEEEEECTTSCEEEEEE-CSSCEEEEEECTT-TCCEEECCC-S--CSHHHHHCCSEEEE
T ss_pred EEEEcCCCCCceEeecCC-CccccceECCCCCEEEEcc-CCCeeEEEEEcCC-CCcEEEccC-C--CcChhhhhhccccc
Confidence 456899999988774332 2234456778999888433 3345688999987 665542221 1 11111122
Q ss_pred --EcCCCcEEEEcCCCCCceEEe
Q 042303 124 --TLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 124 --~L~dG~V~viGG~~~~~~E~y 144 (519)
.-+||++++.+..++ ...+|
T Consensus 251 ~~~spdg~~~~~~~~~g-~~~l~ 272 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREG-RSAVF 272 (582)
T ss_dssp EEECTTSCEEEEEEETT-EEEEE
T ss_pred eeEcCCCcEEEEEEcCC-cEEEE
Confidence 457998888876543 46666
No 220
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=42.41 E-value=2.1e+02 Score=26.42 Aligned_cols=20 Identities=30% Similarity=0.531 Sum_probs=14.1
Q ss_pred eeCCcEEEEeC-CceEEeeCC
Q 042303 190 VTDGNLFIFSN-NRSILFDPK 209 (519)
Q Consensus 190 ~~~G~Ifv~Gg-~~~~~yDp~ 209 (519)
..+|+||+... ....+||+.
T Consensus 145 ~~~g~l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 145 SEDGTIYVGSNDNYLYAINPD 165 (330)
T ss_dssp CTTSCEEEECTTSEEEEECTT
T ss_pred cCCCEEEEEcCCCEEEEECCC
Confidence 34788887654 456789998
No 221
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=42.29 E-value=1.1e+02 Score=29.98 Aligned_cols=62 Identities=10% Similarity=0.040 Sum_probs=37.4
Q ss_pred CeeccCCeEEEecCCCCCCceEEEEeCCCC-CccccCCCCCCCcccc----------------ceEEEcCCCcEEEEcCC
Q 042303 74 GGLTVDGHLVGTGGYQGGANTVRYLWTCDT-CDWIEYPTALAEPRWY----------------STQVTLPDGGFIVVGGR 136 (519)
Q Consensus 74 ~~~l~dG~llv~GG~~~g~~~v~~ydp~~~-~~W~~~~~~m~~~R~y----------------~s~~~L~dG~V~viGG~ 136 (519)
..+.+||+++++|+. ..+++||.. + .+ .+.. +...... ..++.-+||+.++.|+.
T Consensus 291 ~~~s~~g~~l~~~~~----~~v~iwd~~-~~~~--~~~~-~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~ 362 (447)
T 3dw8_B 291 VKFSHSGRYMMTRDY----LSVKVWDLN-MENR--PVET-YQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSY 362 (447)
T ss_dssp EEECTTSSEEEEEES----SEEEEEETT-CCSS--CSCC-EESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECS
T ss_pred EEECCCCCEEEEeeC----CeEEEEeCC-CCcc--ccce-eeccccccccccccccccccccceEEEECCCCCEEEEecc
Confidence 455678999998864 578999976 3 21 1111 2111110 11555679999988887
Q ss_pred CCCceEEe
Q 042303 137 GAFSYEYI 144 (519)
Q Consensus 137 ~~~~~E~y 144 (519)
++ .+.+|
T Consensus 363 dg-~v~iw 369 (447)
T 3dw8_B 363 NN-FFRMF 369 (447)
T ss_dssp TT-EEEEE
T ss_pred CC-EEEEE
Confidence 63 56666
No 222
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=41.44 E-value=3.7e+02 Score=29.16 Aligned_cols=39 Identities=15% Similarity=0.096 Sum_probs=25.8
Q ss_pred EeCCCCCcceeeecCCCCcC--CccceeeeEcCCCcEEEec
Q 042303 339 YKTKEKRHHRFQELAPTTIP--RMYHSVSVLLPDGKVLIAG 377 (519)
Q Consensus 339 YdP~t~~g~~W~~~~~~~~~--R~yhs~a~LlpdG~V~v~G 377 (519)
++-..+.|.+|+.......+ ..+++..+.++||+|+++=
T Consensus 617 ~~~S~D~G~TW~~~~~i~~~~~~~~Ys~l~~~~DG~i~ily 657 (686)
T 2jkb_A 617 LVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPNHHIGVLF 657 (686)
T ss_dssp EECTTTCCEEEEEEEESSCTTSBCCSEEEEECTTSCEEEEE
T ss_pred EEeccCCCCcccCCeeecCCCCCccccEEEEeCcCEEEEEE
Confidence 45566778899876544332 2444666678999997764
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=41.15 E-value=1.3e+02 Score=32.63 Aligned_cols=98 Identities=12% Similarity=0.101 Sum_probs=51.2
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcc--e-----eeceeEEecCCcEEEEcCcC
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTR--R-----VMGDMTILPTGDVLLVNGAQ 320 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~--R-----~~~~~vvLpdG~V~viGG~~ 320 (519)
+++||++... ..+.++|.......|+.. ..... . ....++++-+|+||+....
T Consensus 70 ~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d- 130 (689)
T 1yiq_A 70 DGVMYTTGPF------------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD- 130 (689)
T ss_dssp TTEEEEECGG------------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-
T ss_pred CCEEEEEcCC------------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC-
Confidence 8888886532 135568876555679875 33211 0 0011234458888875421
Q ss_pred CCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCc-cceeeeEcCCCcEEEecCC
Q 042303 321 NGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRM-YHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 321 ~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~-yhs~a~LlpdG~V~v~GG~ 379 (519)
+ .+..+|.+|++ ..|+.-......+. ....+-++.+|+||+..+.
T Consensus 131 -g------------~l~AlDa~TG~-~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~ 176 (689)
T 1yiq_A 131 -G------------RLEAIDAKTGQ-RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGG 176 (689)
T ss_dssp -S------------EEEEEETTTCC-EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBC
T ss_pred -C------------EEEEEECCCCC-EeeeecCcCCCCCCccccCCcEEECCEEEEEeCC
Confidence 1 45788988762 24765432111111 1222223349999986543
No 224
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=41.08 E-value=3.4e+02 Score=28.51 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=45.5
Q ss_pred eEEEEECCCC-cEEECccC-CCcc---cCCCeecc--CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccce
Q 042303 49 HSVLFDIETA-KLKPLKIQ-TDTW---CSSGGLTV--DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYST 121 (519)
Q Consensus 49 ~~~~yDp~t~-~w~~l~~~-~~~~---c~~~~~l~--dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s 121 (519)
...+||+.++ +.+.+... ...+ .....+.+ ||++++++.. ++...++.+|.. ......+. ...|...
T Consensus 285 ~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~-~~~~~~l~----~~~~~v~ 358 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTT-GRLIRQVT----KGEWEVT 358 (706)
T ss_dssp EEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT-TSSCEEEEEETT-SCEEEECC----CSSSCEE
T ss_pred EEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc-CCccEEEEEECC-CCEEEecC----CCCeEEE
Confidence 4567899988 66655322 1111 23456778 9998877654 355677778855 44444332 2333322
Q ss_pred --EEEcCCCcEEEEcCC
Q 042303 122 --QVTLPDGGFIVVGGR 136 (519)
Q Consensus 122 --~~~L~dG~V~viGG~ 136 (519)
.+.-+||+.+++.+.
T Consensus 359 ~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 359 NFAGFDPKGTRLYFEST 375 (706)
T ss_dssp EEEEECTTSSEEEEEES
T ss_pred eeeEEcCCCCEEEEEec
Confidence 344467865444433
No 225
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=40.79 E-value=3e+02 Score=27.70 Aligned_cols=48 Identities=15% Similarity=0.021 Sum_probs=30.8
Q ss_pred CeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcC
Q 042303 80 GHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGG 135 (519)
Q Consensus 80 G~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG 135 (519)
|+||++=- . ..++.+|+. +.+.+.+...+..++ ..+.-++|++||.--
T Consensus 153 g~Lyv~D~---~-~~I~~id~~-~g~v~~~~~~~~~P~---giavd~dG~lyVad~ 200 (433)
T 4hw6_A 153 DDLYWVGQ---R-DAFRHVDFV-NQYVDIKTTNIGQCA---DVNFTLNGDMVVVDD 200 (433)
T ss_dssp CEEEEECB---T-SCEEEEETT-TTEEEEECCCCSCEE---EEEECTTCCEEEEEC
T ss_pred CEEEEEeC---C-CCEEEEECC-CCEEEEeecCCCCcc---EEEECCCCCEEEEcC
Confidence 88888732 1 679999997 566655443233222 455567899998853
No 226
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=39.88 E-value=35 Score=30.84 Aligned_cols=35 Identities=40% Similarity=0.870 Sum_probs=25.9
Q ss_pred CCCcEEEEEEcCCCCCcCCCcceEEEEEc-----------CC----------cCCccEEEEe
Q 042303 478 APGQHKIVAEAPPSGVITPPGYYLLYVVY-----------KG----------VPSPGMWFQI 518 (519)
Q Consensus 478 ~~g~~~~~v~~P~~~~~~ppG~ymlf~~~-----------~g----------vPS~a~~v~i 518 (519)
..|..+-.+++|. -|||||+|-| +| ||..+-||.|
T Consensus 276 tagaftksitlpk------tgyymlyvanvlevddwsvdadgkltttgevwevpakgcwvni 331 (336)
T 2vov_A 276 TAGAFTKSITLPK------TGYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNI 331 (336)
T ss_dssp CTTEEEEEEECSS------SEEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEE
T ss_pred ccceeeeeeeccC------cceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEE
Confidence 3555666678775 4999999864 12 8999999887
No 227
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=38.27 E-value=1.3e+02 Score=32.41 Aligned_cols=98 Identities=10% Similarity=0.088 Sum_probs=51.1
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCccee-------eceeEEecCCcEEEEcCcC
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRRV-------MGDMTILPTGDVLLVNGAQ 320 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~-------~~~~vvLpdG~V~viGG~~ 320 (519)
+++||++... ..+..+|..+....|+.. ..+.... ....+++-+|+||+....
T Consensus 66 ~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d- 126 (668)
T 1kv9_A 66 DGVIYTSMSW------------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD- 126 (668)
T ss_dssp TTEEEEEEGG------------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-
T ss_pred CCEEEEECCC------------------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC-
Confidence 8888887532 135567876555678875 3221100 011133458888875321
Q ss_pred CCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCC
Q 042303 321 NGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 321 ~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 379 (519)
+ .+..+|.++.+ ..|+.-..-.........+-++.+|+||+..++
T Consensus 127 -g------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~ 171 (668)
T 1kv9_A 127 -G------------RLIALDAKTGK-AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGG 171 (668)
T ss_dssp -S------------EEEEEETTTCC-EEEEEECSCTTSSCBCCSCCEEETTEEEECCBC
T ss_pred -C------------EEEEEECCCCC-EeeeeccCCCCCcceecCCCEEECCEEEEeCCC
Confidence 1 45789988762 247653321111112222223349999987543
No 228
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=36.82 E-value=4.2e+02 Score=28.38 Aligned_cols=125 Identities=9% Similarity=-0.090 Sum_probs=61.2
Q ss_pred EEEECCCCcEEECccC--C-CcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCC-CCCCccccceEEEcC
Q 042303 51 VLFDIETAKLKPLKIQ--T-DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPT-ALAEPRWYSTQVTLP 126 (519)
Q Consensus 51 ~~yDp~t~~w~~l~~~--~-~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~-~m~~~R~y~s~~~L~ 126 (519)
..||+++++++.+... . +....+.....+|+|.+... ..+.+|||. +.++..... .|+... -.+. .-.
T Consensus 496 ~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~-----~Gl~~~~~~-~~~~~~~~~~gl~~~~-i~~i-~~~ 567 (758)
T 3ott_A 496 DKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFH-----GGVMRINPK-DESQQSISFGSFSNNE-ILSM-TCV 567 (758)
T ss_dssp EEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEET-----TEEEEECC---CCCCBCCCCC---CC-EEEE-EEE
T ss_pred EEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEec-----CceEEEecC-CCceEEecccCCCccc-eEEE-EEC
Confidence 4689999888876321 1 11111122345788887532 248889998 676654421 143322 1222 234
Q ss_pred CCcEEEEcCCCCCceEEe-CCCCCCCCcccccccchhccccccCCcccccccccccCccceE-EEeeCCcEEEEeCCceE
Q 042303 127 DGGFIVVGGRGAFSYEYI-PPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFV-NLVTDGNLFIFSNNRSI 204 (519)
Q Consensus 127 dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~-~~~~~G~Ifv~Gg~~~~ 204 (519)
+|++++... ...-+| |.+.+.. ...+ +.+.+..+ ....+|+||.-|.....
T Consensus 568 ~g~lWi~t~---~Gl~~~~~~~~~~~----~~~~--------------------~~~~~~~~~~~~~~G~l~fG~~~Gl~ 620 (758)
T 3ott_A 568 KNSIWVSTT---NGLWIIDRKTMDAR----QQNM--------------------TNKRFTSLLFDPKEDCVYLGGADGFG 620 (758)
T ss_dssp TTEEEEEES---SCEEEEETTTCCEE----EC----------------------CCCCCSEEEEETTTTEEEEECBSEEE
T ss_pred CCCEEEECC---CCeEEEcCCCceeE----EecC--------------------CCCceeeeEEECCCCcEEEecCCceE
Confidence 788887652 234566 7765321 0000 00111112 22358998876666677
Q ss_pred EeeCCC
Q 042303 205 LFDPKA 210 (519)
Q Consensus 205 ~yDp~t 210 (519)
+|||+.
T Consensus 621 ~f~p~~ 626 (758)
T 3ott_A 621 ISHSNL 626 (758)
T ss_dssp EEEC--
T ss_pred EEChhh
Confidence 899974
No 229
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=36.79 E-value=1.5e+02 Score=27.87 Aligned_cols=59 Identities=12% Similarity=0.190 Sum_probs=33.8
Q ss_pred eeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEec
Q 042303 304 DMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAG 377 (519)
Q Consensus 304 ~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~G 377 (519)
..++-+||++||......+ ..+..||+.+. +.+.+...+..|.-.+.+. .+++++|++-
T Consensus 76 gia~~~dG~l~vad~~~~~-----------~~v~~~d~~~g---~~~~~~~~~~~~~~~g~~~-~~~~~~~v~d 134 (306)
T 2p4o_A 76 GLAFTSNGDLVATGWNADS-----------IPVVSLVKSDG---TVETLLTLPDAIFLNGITP-LSDTQYLTAD 134 (306)
T ss_dssp EEEECTTSCEEEEEECTTS-----------CEEEEEECTTS---CEEEEEECTTCSCEEEEEE-SSSSEEEEEE
T ss_pred eEEEcCCCcEEEEeccCCc-----------ceEEEEcCCCC---eEEEEEeCCCccccCcccc-cCCCcEEEEE
Confidence 3356689999997632210 13567888887 6665544433444344443 4566667654
No 230
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=36.74 E-value=1.3e+02 Score=28.25 Aligned_cols=57 Identities=21% Similarity=0.201 Sum_probs=30.2
Q ss_pred CeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEE
Q 042303 74 GGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVV 133 (519)
Q Consensus 74 ~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~vi 133 (519)
.++..||++|++....+ ...+..||+. +.+...+.. +...|.-...+...++.+|+.
T Consensus 77 ia~~~dG~l~vad~~~~-~~~v~~~d~~-~g~~~~~~~-~~~~~~~~g~~~~~~~~~~v~ 133 (306)
T 2p4o_A 77 LAFTSNGDLVATGWNAD-SIPVVSLVKS-DGTVETLLT-LPDAIFLNGITPLSDTQYLTA 133 (306)
T ss_dssp EEECTTSCEEEEEECTT-SCEEEEEECT-TSCEEEEEE-CTTCSCEEEEEESSSSEEEEE
T ss_pred EEEcCCCcEEEEeccCC-cceEEEEcCC-CCeEEEEEe-CCCccccCcccccCCCcEEEE
Confidence 34557899988753211 1357778876 565554432 333343333444445555654
No 231
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=36.58 E-value=80 Score=32.43 Aligned_cols=18 Identities=11% Similarity=-0.143 Sum_probs=15.0
Q ss_pred ccceEEEcCCCcEEEEcC
Q 042303 118 WYSTQVTLPDGGFIVVGG 135 (519)
Q Consensus 118 ~y~s~~~L~dG~V~viGG 135 (519)
.+|++++..||+||..|-
T Consensus 386 ~~hs~al~~~G~vy~wG~ 403 (473)
T 3of7_A 386 SHHSVAVAQNGIAYSWGF 403 (473)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCcEEEeeC
Confidence 468888888999999984
No 232
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=35.92 E-value=55 Score=32.92 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=39.8
Q ss_pred eceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 302 MGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 302 ~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
.|.+++.-||+||..|-...|.-|.+...+....+..-..-.+ +...++ .-.+|++|+ ..||+||.-|.+..
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~---~v~~ia----~G~~hs~al-t~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE---KIVSVG----CGEVCSYAV-TIDGKLYSWGSGVN 375 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS---CEEEEE----EETTEEEEE-ETTSCEEEEECCTT
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC---CEEEEE----cCCCeEEEE-cCCCCEEEECCCCC
Confidence 4566677799999999655443332211111111111111111 232222 224677665 68999999998876
Q ss_pred CC
Q 042303 382 DG 383 (519)
Q Consensus 382 ~~ 383 (519)
+.
T Consensus 376 Gq 377 (423)
T 3mvd_K 376 NQ 377 (423)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 233
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=35.75 E-value=4.1e+02 Score=27.86 Aligned_cols=110 Identities=10% Similarity=-0.020 Sum_probs=57.5
Q ss_pred cCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEe-CCCCCCCCcccc
Q 042303 78 VDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPQGQSNKQSIY 156 (519)
Q Consensus 78 ~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~y-P~~~~w~~~~~~ 156 (519)
+++.++|+.. +...+.++|+. +.+-. . .+..+..-+..+.-+||+.+.+++.+ ..+..| ....+-. ..
T Consensus 165 ~~~~~~V~~~---~~~~V~viD~~-t~~v~--~-~i~~g~~p~~v~~SpDGr~lyv~~~d-g~V~viD~~~~t~~---~v 233 (567)
T 1qks_A 165 LENLFSVTLR---DAGQIALIDGS-TYEIK--T-VLDTGYAVHISRLSASGRYLFVIGRD-GKVNMIDLWMKEPT---TV 233 (567)
T ss_dssp GGGEEEEEET---TTTEEEEEETT-TCCEE--E-EEECSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCC---EE
T ss_pred CCceEEEEeC---CCCeEEEEECC-CCeEE--E-EEeCCCCccceEECCCCCEEEEEcCC-CeEEEEECCCCCCc---Ee
Confidence 3567777754 24689999987 55432 1 13333333456666788754455443 356666 5311111 11
Q ss_pred cccchhccccccCCcccccccccccCccceEEEe-----eCCcEEEEeC---CceEEeeCCCCeEEEEcc
Q 042303 157 LPLLRETHDQLAGHFGTENFYRIENNLYPFVNLV-----TDGNLFIFSN---NRSILFDPKANRVIREYP 218 (519)
Q Consensus 157 ~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~-----~~G~Ifv~Gg---~~~~~yDp~t~~w~~~~p 218 (519)
.... + ...|..+.+ +||+..++++ ....++|..+.+-.+.++
T Consensus 234 ~~i~--~------------------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 234 AEIK--I------------------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp EEEE--C------------------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred EEEe--c------------------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 1110 0 012333333 4897665554 346789998887655443
No 234
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=35.62 E-value=2.2e+02 Score=29.68 Aligned_cols=58 Identities=16% Similarity=0.132 Sum_probs=36.3
Q ss_pred eEEEEECCCCcEEECccCCCc-----cc---CCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccC
Q 042303 49 HSVLFDIETAKLKPLKIQTDT-----WC---SSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEY 109 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~-----~c---~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~ 109 (519)
.-..+|+.+++++.+...... |. ....+.+||++++.+.. +...++.+|.. +.+...+
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~-~~~~~~l 331 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPE-SGELVDA 331 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETT-TTEEEEC
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECC-CCcEEEe
Confidence 455678888999887643221 11 12233468998888764 56677778876 5555544
No 235
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=35.34 E-value=1.2e+02 Score=34.23 Aligned_cols=84 Identities=10% Similarity=-0.037 Sum_probs=49.9
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCC-------CCceEEEEeCCCCCccccCCCCCCCccccce
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQG-------GANTVRYLWTCDTCDWIEYPTALAEPRWYST 121 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~-------g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s 121 (519)
...+||.++++.+.+...+.......+..+||+.+++++... ....++++|.. +.+...+.. ....-.+
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~-~g~~~~l~~---~~~~~~~ 476 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME-GRKIFAATT---ENSHDYA 476 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT-TTEEEECSC---SSSBEEE
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC-CCcEEEeeC---CCcccCC
Confidence 455899999988776533333334456778999888765421 23588999987 555433322 1111223
Q ss_pred EEEcCCCcEEEEcCC
Q 042303 122 QVTLPDGGFIVVGGR 136 (519)
Q Consensus 122 ~~~L~dG~V~viGG~ 136 (519)
.+--+||+.++.+..
T Consensus 477 ~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 477 PAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEECTTSCEEEEEES
T ss_pred ceEcCCCCEEEEEec
Confidence 445578986666543
No 236
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=34.54 E-value=86 Score=30.09 Aligned_cols=58 Identities=10% Similarity=-0.113 Sum_probs=31.4
Q ss_pred EEEEECCCCcEEECccCCCc----c-cCCCeeccCCeEEEecCC-----C-CCCceEEEEeCCCCCcccc
Q 042303 50 SVLFDIETAKLKPLKIQTDT----W-CSSGGLTVDGHLVGTGGY-----Q-GGANTVRYLWTCDTCDWIE 108 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~----~-c~~~~~l~dG~llv~GG~-----~-~g~~~v~~ydp~~~~~W~~ 108 (519)
..+||+++++.+.+...... . -.+..+.+||+.+++.-. . .+...+.++|.. +.+-..
T Consensus 266 l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~ 334 (388)
T 3pe7_A 266 IYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK-NGTQHR 334 (388)
T ss_dssp EEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT-TTEEEE
T ss_pred EEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc-CCceEE
Confidence 56799999987766543220 1 122356778876654211 1 234578888887 554433
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=34.37 E-value=1.5e+02 Score=32.01 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=51.2
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEecCCCCceEec-cCCcce-------eeceeEEecCCcEEEEcCcC
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKE-MMPTRR-------VMGDMTILPTGDVLLVNGAQ 320 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R-------~~~~~vvLpdG~V~viGG~~ 320 (519)
+++||++... ..+.++|.......|+.. ...... .....+++-+++||+....
T Consensus 77 ~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d- 137 (677)
T 1kb0_A 77 DGIMYVSASW------------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD- 137 (677)
T ss_dssp TTEEEEECGG------------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT-
T ss_pred CCEEEEECCC------------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC-
Confidence 8888887542 235567876445678876 322110 0111234458888875321
Q ss_pred CCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCcc-ceeeeEcCCCcEEEecCC
Q 042303 321 NGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMY-HSVSVLLPDGKVLIAGSN 379 (519)
Q Consensus 321 ~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~y-hs~a~LlpdG~V~v~GG~ 379 (519)
+ .+.++|.++++ ..|+.-......+.+ ...+.++.+|+||+..+.
T Consensus 138 -g------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~ 183 (677)
T 1kb0_A 138 -G------------RLIALDAATGK-EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGG 183 (677)
T ss_dssp -S------------EEEEEETTTCC-EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBC
T ss_pred -C------------EEEEEECCCCC-EEeeecCCcCcCcCcccccCcEEECCEEEEEecc
Confidence 1 35788988762 247653220111111 122233458999887654
No 238
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=33.83 E-value=4.4e+02 Score=27.63 Aligned_cols=87 Identities=10% Similarity=0.016 Sum_probs=48.1
Q ss_pred eEEEEECCC-----CcEEECccCCCc-c-------------cCCCeeccCCeEEEecCCC--------------------
Q 042303 49 HSVLFDIET-----AKLKPLKIQTDT-W-------------CSSGGLTVDGHLVGTGGYQ-------------------- 89 (519)
Q Consensus 49 ~~~~yDp~t-----~~w~~l~~~~~~-~-------------c~~~~~l~dG~llv~GG~~-------------------- 89 (519)
...+||..+ ++.+.+...... . ..+....+||+.++++..+
T Consensus 142 ~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~ 221 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESK 221 (706)
T ss_dssp EEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEE
T ss_pred eEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceE
Confidence 455789888 777766443222 1 2344567899888877521
Q ss_pred ----------CCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCC
Q 042303 90 ----------GGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGR 136 (519)
Q Consensus 90 ----------~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~ 136 (519)
.+...+.++|.. +.+-..+...........+.+--+||+.++++..
T Consensus 222 ~~~y~~~g~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 277 (706)
T 2z3z_A 222 PLYYPMAGTPSHHVTVGIYHLA-TGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV 277 (706)
T ss_dssp EECCCBTTSCCCEEEEEEEETT-TTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred EeeCCCCCCCCCeeEEEEEECC-CCceEeeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence 123578889987 5543332210112222234455579986666543
No 239
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=33.41 E-value=2.2e+02 Score=29.82 Aligned_cols=92 Identities=15% Similarity=0.082 Sum_probs=52.0
Q ss_pred eEEEEECC-CC---cEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCC---CCCCccccc-
Q 042303 49 HSVLFDIE-TA---KLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPT---ALAEPRWYS- 120 (519)
Q Consensus 49 ~~~~yDp~-t~---~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~---~m~~~R~y~- 120 (519)
...++|.. ++ +.+.+..............+||++++++.. ++...+..+|+. +.++..+.. ....+.|.+
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~-~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPA-TGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT-TSSCEEEEECTT-TCCEEESSCCSSBSSCCCCSTT
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC-CCCeEEEEEECC-CCceeecccccccccCcccccc
Confidence 34568888 56 444443221222223345679997777653 345578899986 667766543 112233432
Q ss_pred --eEEEcCCCcEEEEcCCCCCceEEe
Q 042303 121 --TQVTLPDGGFIVVGGRGAFSYEYI 144 (519)
Q Consensus 121 --s~~~L~dG~V~viGG~~~~~~E~y 144 (519)
+.+..+||++++.+.. ....+|
T Consensus 296 ~~~~~~~~~~~~~~~~~~--~~~~l~ 319 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK--GAAVLG 319 (662)
T ss_dssp CCSEEECTTSCEEEEEBS--SSCEEE
T ss_pred CceEeEeCCCEEEEEEEc--CccEEE
Confidence 3444568998888765 334444
No 240
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=33.12 E-value=2e+02 Score=27.24 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=32.5
Q ss_pred EEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCc--CCccceeeeEcCCCcEEEec
Q 042303 306 TILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTI--PRMYHSVSVLLPDGKVLIAG 377 (519)
Q Consensus 306 vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~--~R~yhs~a~LlpdG~V~v~G 377 (519)
+..+||++++... . .+.+||+++. +++.+..... +........+-+||++|++.
T Consensus 96 ~~~~dg~l~v~~~--~-------------gl~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 151 (326)
T 2ghs_A 96 AKISDSKQLIASD--D-------------GLFLRDTATG---VLTLHAELESDLPGNRSNDGRMHPSGALWIGT 151 (326)
T ss_dssp EEEETTEEEEEET--T-------------EEEEEETTTC---CEEEEECSSTTCTTEEEEEEEECTTSCEEEEE
T ss_pred EEeCCCeEEEEEC--C-------------CEEEEECCCC---cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEe
Confidence 3468999888541 1 2568999888 7665543221 11112234457899999865
No 241
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=32.97 E-value=2.5e+02 Score=29.63 Aligned_cols=119 Identities=12% Similarity=0.121 Sum_probs=0.0
Q ss_pred EeeCCcEEEEeC-CceEEeeCCCCe--EEEEccCCCCCCCccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccc
Q 042303 189 LVTDGNLFIFSN-NRSILFDPKANR--VIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYY 265 (519)
Q Consensus 189 ~~~~G~Ifv~Gg-~~~~~yDp~t~~--w~~~~p~~p~~~r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~ 265 (519)
++.+|+||+... ....++|.++++ |......-......+......+.+. +++||+.....
T Consensus 65 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~-----------~~~v~~~t~dg------ 127 (582)
T 1flg_A 65 IVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY-----------GDKVFFGTLDA------ 127 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE-----------TTEEEEEETTT------
T ss_pred EEECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE-----------CCEEEEEeCCC------
Q ss_pred cccccccccCCCceEEEEecCCCCceEec--cCCcceeeceeEEecCC------cEEE-EcCcCCCCCCccCCCCCcccc
Q 042303 266 AEDKKQFWPALQDCGRIRITEPNPVWKKE--MMPTRRVMGDMTILPTG------DVLL-VNGAQNGTSAWNDAEEPALAP 336 (519)
Q Consensus 266 ~~~~~~~~~a~~s~~~~d~~~~~~~W~~~--~M~~~R~~~~~vvLpdG------~V~v-iGG~~~g~~g~~~~~~~~~~~ 336 (519)
.+..+|.......|+.. .-...-...++-++.++ +||+ ..|...+..+ .+
T Consensus 128 ------------~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g---------~v 186 (582)
T 1flg_A 128 ------------SVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVG---------RL 186 (582)
T ss_dssp ------------EEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBC---------EE
T ss_pred ------------EEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCC---------EE
Q ss_pred EEEeCCCCCcce
Q 042303 337 ALYKTKEKRHHR 348 (519)
Q Consensus 337 e~YdP~t~~g~~ 348 (519)
..||+++. +
T Consensus 187 ~alD~~tG---~ 195 (582)
T 1flg_A 187 FARDPDTG---E 195 (582)
T ss_dssp EEECTTTC---C
T ss_pred EEEECCCC---C
No 242
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=31.62 E-value=1.6e+02 Score=28.09 Aligned_cols=53 Identities=15% Similarity=0.002 Sum_probs=35.0
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCc
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCD 105 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~ 105 (519)
.-.++|+.+++.+.+...+..........+||+.+++.... ..++++|.. +.+
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~-~g~ 113 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLA-TLE 113 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETT-TCC
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECC-CCc
Confidence 34568999999888765443322234577899877766532 478888877 444
No 243
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=31.17 E-value=4e+02 Score=26.38 Aligned_cols=26 Identities=4% Similarity=0.186 Sum_probs=19.7
Q ss_pred CCcEEEEeCCc--eEEeeCCCCeEEEEc
Q 042303 192 DGNLFIFSNNR--SILFDPKANRVIREY 217 (519)
Q Consensus 192 ~G~Ifv~Gg~~--~~~yDp~t~~w~~~~ 217 (519)
+|.+++.|+.+ ..+||.++++..+.+
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEE
Confidence 67888887754 568999999865554
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=26.81 E-value=1.8e+02 Score=30.60 Aligned_cols=97 Identities=9% Similarity=0.134 Sum_probs=50.7
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEe-cCCCCceEec-cCCcc-e------eeceeEEecCCcEEEEcCc
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRI-TEPNPVWKKE-MMPTR-R------VMGDMTILPTGDVLLVNGA 319 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~-~~~~~~W~~~-~M~~~-R------~~~~~vvLpdG~V~viGG~ 319 (519)
+++||+....+ ..+.++|. .+....|+.. ..... + .....+++-+|+||+....
T Consensus 62 ~g~vyv~~~~~-----------------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d 124 (571)
T 2ad6_A 62 GDMMYVHSAFP-----------------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN 124 (571)
T ss_dssp TTEEEEECSTT-----------------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT
T ss_pred CCEEEEEeCCC-----------------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC
Confidence 88899876421 23567887 5545679875 33211 0 0011234458888886431
Q ss_pred CCCCCCccCCCCCccccEEEeCCCCCcceeeecCCC-CcCCccceeeeEcCCCcEEEecC
Q 042303 320 QNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPT-TIPRMYHSVSVLLPDGKVLIAGS 378 (519)
Q Consensus 320 ~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~-~~~R~yhs~a~LlpdG~V~v~GG 378 (519)
. .+.++|.++++ ..|+.-... .......+ +-++-+|+||+..+
T Consensus 125 g--------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~-~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 125 G--------------HLLALDAKTGK-INWEVEVCDPKVGSTLTQ-APFVAKDTVLMGCS 168 (571)
T ss_dssp S--------------EEEEEETTTCC-EEEEEECCCGGGTCBCCS-CCEEETTEEEEECB
T ss_pred C--------------EEEEEECCCCC-EEEEecCCCCCccceecc-CCEEECCEEEEEec
Confidence 1 35788988762 247642211 11101112 22234899988765
No 245
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=25.75 E-value=89 Score=30.04 Aligned_cols=57 Identities=11% Similarity=0.132 Sum_probs=35.8
Q ss_pred EEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCcccee-eeEcCCCcEEEecCCC
Q 042303 306 TILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSV-SVLLPDGKVLIAGSNT 380 (519)
Q Consensus 306 vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~-a~LlpdG~V~v~GG~~ 380 (519)
++=++|+||+..-.. ..+.+|||++. ++..+...+ +..+-. ..+-+||++||+....
T Consensus 254 a~d~~G~l~va~~~~-------------~~V~~~d~~~G---~~~~~~~~~--~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAH-------------SAIGVITSADR---AYKLLVTDE--KLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EECTTCCEEEEEGGG-------------TEEEEEETTTT---EEEEEEECG--GGSCEEEEEECTTSCEEEEECCG
T ss_pred EECCCCCEEEEccCC-------------CeEEEEECCCC---CEEEEEECC--ceecCCeeEECCCCcEEEEeCcc
Confidence 445789999975321 15789999666 666554432 332222 2334899999997643
No 246
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=24.85 E-value=3.2e+02 Score=25.76 Aligned_cols=75 Identities=11% Similarity=-0.020 Sum_probs=42.4
Q ss_pred EEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCC---CCCCccccceEEEcC
Q 042303 50 SVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPT---ALAEPRWYSTQVTLP 126 (519)
Q Consensus 50 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~---~m~~~R~y~s~~~L~ 126 (519)
...||+++++.+.+.... ...+....+||++++... ..+..||+. +.++..+.. .....| -...+.-+
T Consensus 73 i~~~d~~~~~~~~~~~~~--~v~~i~~~~dg~l~v~~~-----~gl~~~d~~-~g~~~~~~~~~~~~~~~~-~~~i~~d~ 143 (326)
T 2ghs_A 73 LHELHLASGRKTVHALPF--MGSALAKISDSKQLIASD-----DGLFLRDTA-TGVLTLHAELESDLPGNR-SNDGRMHP 143 (326)
T ss_dssp EEEEETTTTEEEEEECSS--CEEEEEEEETTEEEEEET-----TEEEEEETT-TCCEEEEECSSTTCTTEE-EEEEEECT
T ss_pred EEEEECCCCcEEEEECCC--cceEEEEeCCCeEEEEEC-----CCEEEEECC-CCcEEEEeeCCCCCCCCC-CCCEEECC
Confidence 446888888766543221 122234557899888642 348899987 666654432 011122 22345556
Q ss_pred CCcEEEE
Q 042303 127 DGGFIVV 133 (519)
Q Consensus 127 dG~V~vi 133 (519)
+|++|+.
T Consensus 144 ~G~l~v~ 150 (326)
T 2ghs_A 144 SGALWIG 150 (326)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 8888764
No 247
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=24.53 E-value=1.9e+02 Score=29.53 Aligned_cols=16 Identities=13% Similarity=0.100 Sum_probs=13.0
Q ss_pred eeeeeCCCCEEEEEecc
Q 042303 2 HAILLPKVNQVLMYDAT 18 (519)
Q Consensus 2 h~~ll~~~g~vl~~~~~ 18 (519)
.++++ ++|++|+.++.
T Consensus 31 ~~a~~-pdG~l~V~e~~ 46 (454)
T 1cru_A 31 ALLWG-PDNQIWLTERA 46 (454)
T ss_dssp EEEEC-TTSCEEEEETT
T ss_pred EEEEc-CCCcEEEEEcC
Confidence 57788 99999998764
No 248
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=23.52 E-value=88 Score=31.04 Aligned_cols=67 Identities=25% Similarity=0.402 Sum_probs=38.4
Q ss_pred ceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCc-----CCccceeeeEcC-------C
Q 042303 303 GDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTI-----PRMYHSVSVLLP-------D 370 (519)
Q Consensus 303 ~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~-----~R~yhs~a~Llp-------d 370 (519)
...+.|+||+||+.-=.... ...-....+|. .+|.|++|+.+..... .-.+|.+...+| +
T Consensus 26 p~~v~L~dG~lLa~~~~~~~-------~~~~~~~~v~r-S~DgG~TW~~~~~v~~~~~g~~~~~~P~l~~lp~~v~~~~~ 97 (355)
T 3a72_A 26 PRNEQLPNGDLLATWENYSP-------EPPAVYFPIYR-SKDHGKTWNEISRVHDTVNGYGLRYQPFLYSLPERVGSFKK 97 (355)
T ss_dssp EEEEECTTSCEEEEEEECCC-------SSSCCCEEEEE-ESSTTSCCEEEEEECCTTTSSCEEEEEEEEECSSCBTTBCT
T ss_pred ceEEEcCCCCEEEEEEeecC-------CCCCceEEEEE-EcCCCcCcCCCcccCCCcCCcccccCCcEEecCcccccCCC
Confidence 34578999999886211100 00011234665 4677899998654322 112355555567 9
Q ss_pred CcEEEec
Q 042303 371 GKVLIAG 377 (519)
Q Consensus 371 G~V~v~G 377 (519)
|+|+.+|
T Consensus 98 G~ll~~~ 104 (355)
T 3a72_A 98 GTLLLAG 104 (355)
T ss_dssp TCEEEEE
T ss_pred CcEEEEE
Confidence 9999886
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=23.30 E-value=5.7e+02 Score=27.18 Aligned_cols=26 Identities=23% Similarity=0.305 Sum_probs=18.3
Q ss_pred EeeCCcEEEEeCC-ceEEeeCCCCe--EE
Q 042303 189 LVTDGNLFIFSNN-RSILFDPKANR--VI 214 (519)
Q Consensus 189 ~~~~G~Ifv~Gg~-~~~~yDp~t~~--w~ 214 (519)
++.+|+||+.... ....+|.++++ |.
T Consensus 63 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~ 91 (668)
T 1kv9_A 63 LFHDGVIYTSMSWSRVIAVDAASGKELWR 91 (668)
T ss_dssp EEETTEEEEEEGGGEEEEEETTTCCEEEE
T ss_pred EEECCEEEEECCCCeEEEEECCCChhceE
Confidence 3468899987654 46788988764 54
No 250
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=23.05 E-value=1.5e+02 Score=27.98 Aligned_cols=92 Identities=13% Similarity=0.147 Sum_probs=0.0
Q ss_pred eeeeeCCCCEEEEEecccccccCcCCCCCCCCccccCCCCCCCccceeEEEEECCCCcEEECccCCCcccCCCeeccCCe
Q 042303 2 HAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGH 81 (519)
Q Consensus 2 h~~ll~~~g~vl~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~ 81 (519)
|+.+| .+|+|+.||....|...++..-. .+.+.+..-.+..|.- . ||+
T Consensus 152 ~~~~l-~~G~v~~wG~n~~gqlg~p~~~~---------------------------~~v~~i~~G~~hs~al-~---~G~ 199 (282)
T 3qhy_B 152 TALAV-KNGGVIAWGDNYFGQTTVPAEAQ---------------------------SGVDDVAGGIFHSLAL-K---DGK 199 (282)
T ss_dssp EEEEE-ETTEEEEEECCTTSTTSCCGGGG---------------------------SSEEEEEECSSEEEEE-E---TTE
T ss_pred EEEEE-ECCEEEEecCCCCCCCCCceecC---------------------------CCeEEEEecCCEEEEE-E---CCe
Q ss_pred EEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEc
Q 042303 82 LVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVG 134 (519)
Q Consensus 82 llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viG 134 (519)
||..|-...+.-. -|. ........ +.... +|++++. ||+||..|
T Consensus 200 v~~wG~n~~gqlg----~p~--~~~~~v~~-i~~G~-~h~~al~-~g~v~~wG 243 (282)
T 3qhy_B 200 VIAWGDNRYKQTT----VPT--EALSGVSA-IASGE-WYSLALK-NGKVIAWG 243 (282)
T ss_dssp EEEEECCTTSTTC----CCG--GGGSSCCE-EEECS-SCEEEEE-TTEEEEES
T ss_pred EEEEECCCCCCCC----CCc--ccCCCceE-EEcCC-CEEEEEE-CCEEEEec
No 251
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=22.70 E-value=2.3e+02 Score=28.39 Aligned_cols=60 Identities=18% Similarity=0.118 Sum_probs=34.6
Q ss_pred ccCCCeecc-CCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCc-EEEEc
Q 042303 70 WCSSGGLTV-DGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGG-FIVVG 134 (519)
Q Consensus 70 ~c~~~~~l~-dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~-V~viG 134 (519)
.+.+.++.+ +|+||++-- +...+..||+. +..-..+.. +....|-...+.-++|+ +|++-
T Consensus 227 ~p~giavdp~~g~lyv~d~---~~~~V~~~~~~-~~~~~~~~~-~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSW---NAGQVFRYDFT-TQETTPLFT-IQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp SCCCEEECTTTCCEEEEET---TTTEEEEEETT-TTEEEEEEE-CSSSSCCEEEEECTTSSEEEEEE
T ss_pred CceEEEEeCCCCEEEEEEC---CCCEEEEEECC-CCcEEEEEE-cCCCCcceeEEEcCCCCEEEEEE
Confidence 344556666 799998732 23579999987 443322221 22222323456667888 88874
No 252
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=22.25 E-value=3.2e+02 Score=26.04 Aligned_cols=49 Identities=4% Similarity=-0.158 Sum_probs=25.6
Q ss_pred eEEEEECC-CCcEEECccCC----CcccCCCeeccCCeEEEecCCCCCCceEEEEe
Q 042303 49 HSVLFDIE-TAKLKPLKIQT----DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLW 99 (519)
Q Consensus 49 ~~~~yDp~-t~~w~~l~~~~----~~~c~~~~~l~dG~llv~GG~~~g~~~v~~yd 99 (519)
...+||.. +++.+.+.... ...-.+.++.+||+.+.+.... ...+.+|+
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~--~~~v~v~~ 221 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA--GNRICEYV 221 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEE
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC--CCeEEEEE
Confidence 45578887 77765443211 1112233567899655554432 23566654
No 253
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=22.21 E-value=2e+02 Score=30.36 Aligned_cols=49 Identities=16% Similarity=0.119 Sum_probs=26.0
Q ss_pred ceEEEEecCCCCceEeccCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCC
Q 042303 278 DCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTK 342 (519)
Q Consensus 278 s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~ 342 (519)
++..||+. +.+-.. .++....-|..+.-|||+.+.+++.+ + .+.+||..
T Consensus 178 ~V~viD~~--t~~v~~-~i~~g~~p~~v~~SpDGr~lyv~~~d-g------------~V~viD~~ 226 (567)
T 1qks_A 178 QIALIDGS--TYEIKT-VLDTGYAVHISRLSASGRYLFVIGRD-G------------KVNMIDLW 226 (567)
T ss_dssp EEEEEETT--TCCEEE-EEECSSCEEEEEECTTSCEEEEEETT-S------------EEEEEETT
T ss_pred eEEEEECC--CCeEEE-EEeCCCCccceEECCCCCEEEEEcCC-C------------eEEEEECC
Confidence 45567764 222221 22222222355677999865555431 1 47899986
No 254
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=22.19 E-value=1.1e+02 Score=30.46 Aligned_cols=74 Identities=15% Similarity=0.174 Sum_probs=39.6
Q ss_pred eceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCC
Q 042303 302 MGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 302 ~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
.|.+++.-||+||..|-...|.-|.+. ......+..-..-. +.+...++ .-.+|+++ |..||+||.-|-+..
T Consensus 275 ~hs~alt~~G~v~~wG~n~~GqLG~g~-~~~~~~P~~v~~l~--~~~v~~ia----~G~~h~~a-l~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 275 QFSVALTKSGAVYTWGKGDYHRLGHGS-DDHVRRPRQVQGLQ--GKKVIAIA----TGSLHCVC-CTEDGEVYTWGDNDE 346 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTCSSS-CCCEEEEEECGGGT--TCCEEEEE----ECSSEEEE-EETTCCEEEEECCTT
T ss_pred CEEEEEeCCCeEEEEeCCCCCCCCCCC-CccccCCeEeccCC--CCCEEEEE----eccCeEEE-ECCCCCEEEeeCCCC
Confidence 456667789999999965544322211 11111121111101 11333332 23467665 468999999998866
Q ss_pred CC
Q 042303 382 DG 383 (519)
Q Consensus 382 ~~ 383 (519)
+.
T Consensus 347 Gq 348 (389)
T 3kci_A 347 GQ 348 (389)
T ss_dssp ST
T ss_pred Cc
Confidence 54
No 255
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=22.15 E-value=3.4e+02 Score=26.13 Aligned_cols=73 Identities=15% Similarity=-0.037 Sum_probs=41.5
Q ss_pred eEEEEECCCCcEEECccCCCcccCCCeeccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCC-CCccccceEEEcCC
Q 042303 49 HSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTAL-AEPRWYSTQVTLPD 127 (519)
Q Consensus 49 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m-~~~R~y~s~~~L~d 127 (519)
...+||.++.+-...-.... ..+.++.+||+.+.+.+. +++.+||.. +.+-..+.. + ..++.-...+.-+|
T Consensus 287 ~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~----~~v~v~D~~-t~~l~~~~~-i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 287 EIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG----GNVNVYDIS-QPEPKLLRT-IEGAAEASLQVQFHPV 358 (361)
T ss_dssp EEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS----SCEEEEECS-SSSCEEEEE-ETTSCSSEEEEEECCC
T ss_pred eEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC----CeEEEEECC-CCcceeeEE-eccCCCCcEEEEecCC
Confidence 56689999987643222222 555677789876666542 689999977 441033321 2 23443334455566
Q ss_pred Cc
Q 042303 128 GG 129 (519)
Q Consensus 128 G~ 129 (519)
|+
T Consensus 359 G~ 360 (361)
T 2oiz_A 359 GG 360 (361)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 256
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=21.95 E-value=1.4e+02 Score=31.98 Aligned_cols=66 Identities=11% Similarity=-0.028 Sum_probs=40.3
Q ss_pred CCCeeccCCeEEEecCCCCCCceEEEEeCCCCCcc--------ccCCCCCC-CccccceEEEcCCCcEEEEcCCCCCceE
Q 042303 72 SSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDW--------IEYPTALA-EPRWYSTQVTLPDGGFIVVGGRGAFSYE 142 (519)
Q Consensus 72 ~~~~~l~dG~llv~GG~~~g~~~v~~ydp~~~~~W--------~~~~~~m~-~~R~y~s~~~L~dG~V~viGG~~~~~~E 142 (519)
.+.+.-+||+.+++||.+ ..+++||.. ++.- ..+...+. ...|-.+.+-.+|| +++++.+ .++-
T Consensus 133 ~svafSPDG~~LAsgs~D---GtVkIWd~~-~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D-~tVr 205 (588)
T 2j04_A 133 HCFEWNPIESSIVVGNED---GELQFFSIR-KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN-NSVF 205 (588)
T ss_dssp EEEEECSSSSCEEEEETT---SEEEEEECC-CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT-CCEE
T ss_pred EEEEEcCCCCEEEEEcCC---CEEEEEECC-CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC-CeEE
Confidence 344566899999999864 579999987 4421 11100011 12366667777888 5666655 5666
Q ss_pred Ee
Q 042303 143 YI 144 (519)
Q Consensus 143 ~y 144 (519)
+|
T Consensus 206 lW 207 (588)
T 2j04_A 206 SM 207 (588)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 257
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=21.67 E-value=7.5e+02 Score=26.31 Aligned_cols=27 Identities=15% Similarity=0.288 Sum_probs=19.1
Q ss_pred EeeCCcEEEEeC-CceEEeeCCCCe--EEE
Q 042303 189 LVTDGNLFIFSN-NRSILFDPKANR--VIR 215 (519)
Q Consensus 189 ~~~~G~Ifv~Gg-~~~~~yDp~t~~--w~~ 215 (519)
++.+|+||+... .....+|..+++ |..
T Consensus 74 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 103 (677)
T 1kb0_A 74 VVVDGIMYVSASWSVVHAIDTRTGNRIWTY 103 (677)
T ss_dssp EEETTEEEEECGGGCEEEEETTTTEEEEEE
T ss_pred EEECCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 346889998875 346789998865 543
No 258
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=20.46 E-value=1.2e+02 Score=32.55 Aligned_cols=57 Identities=21% Similarity=0.335 Sum_probs=37.1
Q ss_pred EecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecC-CCC-cCCccceeeeEcCCCcEEEecCCCC
Q 042303 307 ILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELA-PTT-IPRMYHSVSVLLPDGKVLIAGSNTH 381 (519)
Q Consensus 307 vLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~-~~~-~~R~yhs~a~LlpdG~V~v~GG~~~ 381 (519)
--|||+.+++++.+ | ++.+||-+ . .+..+. .++ ..|.+|+++. =|||+.+++||..+
T Consensus 93 wSPdG~~LAs~s~d-g------------~V~iwd~~-~---~l~~l~~~~~~~~~sv~svaf-SPDG~~LAsgs~DG 151 (588)
T 2j04_A 93 PSPIDDWMAVLSNN-G------------NVSVFKDN-K---MLTNLDSKGNLSSRTYHCFEW-NPIESSIVVGNEDG 151 (588)
T ss_dssp ECSSSSCEEEEETT-S------------CEEEEETT-E---EEEECCCSSCSTTTCEEEEEE-CSSSSCEEEEETTS
T ss_pred ECCCCCEEEEEeCC-C------------cEEEEeCC-c---eeeeccCCCccccccEEEEEE-cCCCCEEEEEcCCC
Confidence 35899988888764 1 45788832 2 444444 111 1356887765 58999999998744
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=20.24 E-value=2.9e+02 Score=29.31 Aligned_cols=97 Identities=9% Similarity=0.104 Sum_probs=50.2
Q ss_pred CCeEEEEcCCCCCcccccccccccccCCCceEEEEe-cCCCCceEec-cCCcc-----ee--eceeEEe--cCCc----E
Q 042303 249 HSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRI-TEPNPVWKKE-MMPTR-----RV--MGDMTIL--PTGD----V 313 (519)
Q Consensus 249 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~-~~~~~~W~~~-~M~~~-----R~--~~~~vvL--pdG~----V 313 (519)
+++||++...+ ..+.++|. ......|+.. ..... ++ ....+++ -+|+ |
T Consensus 62 ~g~vyv~~~~~-----------------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV 124 (599)
T 1w6s_A 62 DGKMYIHTSFP-----------------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALI 124 (599)
T ss_dssp TTEEEEECSTT-----------------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEE
T ss_pred CCEEEEEeCCC-----------------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEE
Confidence 88999876521 13557887 5545679876 33211 11 0112344 4778 8
Q ss_pred EEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCC-ccceeeeEcCCCcEEEecC
Q 042303 314 LLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPR-MYHSVSVLLPDGKVLIAGS 378 (519)
Q Consensus 314 ~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R-~yhs~a~LlpdG~V~v~GG 378 (519)
|+.... + .+..+|.++.+ ..|+.-..-.... ...+ +-++.+|+||+..+
T Consensus 125 ~v~t~d--g------------~l~AlDa~TG~-~~W~~~~~~~~~~~~~~s-sP~v~~g~V~vg~~ 174 (599)
T 1w6s_A 125 LKTQLD--G------------NVAALNAETGE-TVWKVENSDIKVGSTLTI-APYVVKDKVIIGSS 174 (599)
T ss_dssp EEECTT--S------------EEEEEETTTCC-EEEEEECCCGGGTCBCCS-CCEEETTEEEECCB
T ss_pred EEEcCC--C------------EEEEEECCCCC-EEEeecCCCCCccceeec-CCEEECCEEEEEec
Confidence 875321 1 35688988762 2476422211110 1112 22234999988764
Done!