BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042314
(370 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 8/260 (3%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G V+ +W G+++A K + RV N F++E+ + ++LRHPNIV F+G +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV-NEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKG---KLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
L +TEYL GSL+ +L K G +LD ++ A D+A+GMNYLH+ P I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVH 162
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL N+L D+ +KV DFGLS++ K S G+ +MAPEV R E +
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
DV+SF +I+ E+ QV ++ R + + A++ CW
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNE 279
Query: 336 PDRRPTFEEIIFRLEAIQES 355
P +RP+F I+ L + +S
Sbjct: 280 PWKRPSFATIMDLLRPLIKS 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 8/260 (3%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G V+ +W G+++A K + RV N F++E+ + ++LRHPNIV F+G +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV-NEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKG---KLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
L +TEYL GSL+ +L K G +LD ++ A D+A+GMNYLH+ P I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVH 162
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
R+L N+L D+ +KV DFGLS++ K S G+ +MAPEV R E +
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
DV+SF +I+ E+ QV ++ R + + A++ CW
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNE 279
Query: 336 PDRRPTFEEIIFRLEAIQES 355
P +RP+F I+ L + +S
Sbjct: 280 PWKRPSFATIMDLLRPLIKS 299
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 141/273 (51%), Gaps = 32/273 (11%)
Query: 86 HVVICKILEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
H++ K +E + GA+G V KWR ++A K I S R +F+ EL +
Sbjct: 4 HMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE-----SERKAFIVELRQLSR 58
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA---VAYALDIARGM 202
+ HPNIV+ G + L+ EY GSL+++L L TA +++ L ++G+
Sbjct: 59 VNHPNIVKLYGACLNPVCLVM--EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 203 NYLHHHRPHAIIHRDLTPSNVLQDEAGH-LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRY 261
YLH +P A+IHRDL P N+L G LK+ DFG + Q MT GS +
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------MTNNKGSAAW 170
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEMFQ--------GGPSNRADTAVQVADRRAYEDSR 313
MAPEV+ +Y + DVFS+ +I+ E+ GGP+ R AV + +R
Sbjct: 171 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-------HNGTR 223
Query: 314 PALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
P L P+PI++L+ CW K+P +RP+ EEI+
Sbjct: 224 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 141/273 (51%), Gaps = 32/273 (11%)
Query: 86 HVVICKILEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
H++ K +E + GA+G V KWR ++A K I S R +F+ EL +
Sbjct: 3 HMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE-----SERKAFIVELRQLSR 57
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA---VAYALDIARGM 202
+ HPNIV+ G + L+ EY GSL+++L L TA +++ L ++G+
Sbjct: 58 VNHPNIVKLYGACLNPVCLVM--EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 203 NYLHHHRPHAIIHRDLTPSNVLQDEAGH-LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRY 261
YLH +P A+IHRDL P N+L G LK+ DFG + Q MT GS +
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------MTNNKGSAAW 169
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEMFQ--------GGPSNRADTAVQVADRRAYEDSR 313
MAPEV+ +Y + DVFS+ +I+ E+ GGP+ R AV + +R
Sbjct: 170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-------HNGTR 222
Query: 314 PALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
P L P+PI++L+ CW K+P +RP+ EEI+
Sbjct: 223 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 135/269 (50%), Gaps = 17/269 (6%)
Query: 93 LEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASN-PRVRNSFMKELGLWQKLRHPNI 151
LE+ GI G +G+VY W G E+A K R + + + +E L+ L+HPNI
Sbjct: 11 LEEIIGI--GGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPH 211
+ GV L + E+ R G L+ +L K ++ P V +A+ IARGMNYLH
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 212 AIIHRDLTPSNVL---QDEAGHL-----KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMA 263
IIHRDL SN+L + E G L K+TDFGL++ S G+Y +MA
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS-----AAGAYAWMA 182
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PEV R + K DV+S+ +++ E+ G R + VA A + S PEP
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEP 242
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLEAI 352
L+ +CW+ +P RP+F I+ +L I
Sbjct: 243 FAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 135/258 (52%), Gaps = 17/258 (6%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G V L KW+G ++A K I+ S + F +E KL HP +V+F GV
Sbjct: 19 GQFGVVKLGKWKGQYDVAVKMIKEGSMSE----DEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 161 SERLIFLTEYLRNGSLHDILKKKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ +TEY+ NG L + L+ GK L+P + D+ GM +L H+ IHRDL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLA 131
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N L D +KV+DFG+++ + D Y G ++ APEV+ Y DV+
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLD-DQYV-SSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 280 SFALIVHEMFQGG--PSN-RADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNP 336
+F +++ E+F G P + ++ V + + + RP L+S + I ++ CWH+ P
Sbjct: 190 AFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLAS---DTIYQIMYSCWHELP 246
Query: 337 DRRPTFEEIIFRLEAIQE 354
++RPTF++++ +E ++E
Sbjct: 247 EKRPTFQQLLSSIEPLRE 264
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 17/262 (6%)
Query: 99 IDPGAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G +G V+L W + +A KTIR S F++E + KL HP +VQ GV
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 158 LKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ +TE++ +G L D L+ ++G T + LD+ GM YL +IHR
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHR 128
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
DL N L E +KV+DFG+++ + D Y+ TG ++ +PEV+ Y
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYT-SSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 277 DVFSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWH 333
DV+SF +++ E+F G NR+++ V + +P L+S + + ++ CW
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH---VYQIMNHCWR 243
Query: 334 KNPDRRPTFEEIIFRLEAIQES 355
+ P+ RP F ++ +L I ES
Sbjct: 244 ERPEDRPAFSRLLRQLAEIAES 265
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 17/262 (6%)
Query: 99 IDPGAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G +G V+L W + +A KTIR S F++E + KL HP +VQ GV
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 158 LKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ + E++ +G L D L+ ++G T + LD+ GM YL +IHR
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHR 127
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
DL N L E +KV+DFG+++ + D Y+ TG ++ +PEV+ Y
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYT-SSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 277 DVFSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWH 333
DV+SF +++ E+F G NR+++ V + +P L+S + + ++ CW
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH---VYQIMNHCWK 242
Query: 334 KNPDRRPTFEEIIFRLEAIQES 355
+ P+ RP F ++ +L I ES
Sbjct: 243 ERPEDRPAFSRLLRQLAEIAES 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 17/262 (6%)
Query: 99 IDPGAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G +G V+L W + +A KTIR S F++E + KL HP +VQ GV
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 158 LKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ + E++ +G L D L+ ++G T + LD+ GM YL +IHR
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHR 130
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
DL N L E +KV+DFG+++ + D Y+ TG ++ +PEV+ Y
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYT-SSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 277 DVFSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWH 333
DV+SF +++ E+F G NR+++ V + +P L+S + + ++ CW
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH---VYQIMNHCWR 245
Query: 334 KNPDRRPTFEEIIFRLEAIQES 355
+ P+ RP F ++ +L I ES
Sbjct: 246 ERPEDRPAFSRLLRQLAEIAES 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 136/262 (51%), Gaps = 15/262 (5%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 20 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMG-Y 76
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A ARGM+YLH +IIHRD
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES---YGK 274
L +N+ E +K+ DFGL+ + + + S S++ +GS +MAPEV R + Y
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 275 SVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE 330
DV++F ++++E+ G N D +++ R + + S P+ +K L+ E
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 252
Query: 331 CWHKNPDRRPTFEEIIFRLEAI 352
C K D RP+F I+ +E +
Sbjct: 253 CLKKKRDERPSFPRILAEIEEL 274
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 17/262 (6%)
Query: 99 IDPGAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G +G V+L W + +A KTIR S F++E + KL HP +VQ GV
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 158 LKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ + E++ +G L D L+ ++G T + LD+ GM YL +IHR
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHR 125
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
DL N L E +KV+DFG+++ + D Y+ TG ++ +PEV+ Y
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYT-SSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 277 DVFSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWH 333
DV+SF +++ E+F G NR+++ V + +P L+S + + ++ CW
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH---VYQIMNHCWK 240
Query: 334 KNPDRRPTFEEIIFRLEAIQES 355
+ P+ RP F ++ +L I ES
Sbjct: 241 ERPEDRPAFSRLLRQLAEIAES 262
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 17/262 (6%)
Query: 99 IDPGAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G +G V+L W + +A KTIR S F++E + KL HP +VQ GV
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 158 LKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ + E++ +G L D L+ ++G T + LD+ GM YL ++IHR
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHR 127
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
DL N L E +KV+DFG+++ + D Y+ TG ++ +PEV+ Y
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYT-SSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 277 DVFSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWH 333
DV+SF +++ E+F G NR+++ V + +P L+S + + ++ CW
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH---VYQIMNHCWK 242
Query: 334 KNPDRRPTFEEIIFRLEAIQES 355
+ P+ RP F ++ +L AI S
Sbjct: 243 ERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 136/264 (51%), Gaps = 19/264 (7%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMG-Y 88
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +L +T++ SL H + + K + + A ARGM+YLH +IIHRD
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYS--YKMTGGTGSYRYMAPEVYRRES---Y 272
L +N+ E +K+ DFGL A EK +S ++ +GS +MAPEV R + Y
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGL---ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 273 GKSVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALL 328
DV++F ++++E+ G N D +++ R + + S P+ +K L+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
Query: 329 RECWHKNPDRRPTFEEIIFRLEAI 352
EC K D RP+F I+ +E +
Sbjct: 263 AECLKKKRDERPSFPRILAEIEEL 286
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 19/264 (7%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMG-Y 88
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A ARGM+YLH +IIHRD
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYS--YKMTGGTGSYRYMAPEVYRRES---Y 272
L +N+ E +K+ DFGL A EK +S ++ +GS +MAPEV R + Y
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGL---ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 273 GKSVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALL 328
DV++F ++++E+ G N D +++ R + + S P+ +K L+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
Query: 329 RECWHKNPDRRPTFEEIIFRLEAI 352
EC K D RP+F I+ +E +
Sbjct: 263 AECLKKKRDERPSFPRILAEIEEL 286
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 130/262 (49%), Gaps = 17/262 (6%)
Query: 99 IDPGAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G +G V+L W + +A KTI+ S + F++E + KL HP +VQ GV
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE----DDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 158 LKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ + E++ +G L D L+ ++G T + LD+ GM YL +IHR
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHR 147
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
DL N L E +KV+DFG+++ + D Y+ TG ++ +PEV+ Y
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYT-SSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 277 DVFSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWH 333
DV+SF +++ E+F G NR+++ V + +P L+S + + ++ CW
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH---VYQIMNHCWK 262
Query: 334 KNPDRRPTFEEIIFRLEAIQES 355
+ P+ RP F ++ +L I ES
Sbjct: 263 ERPEDRPAFSRLLRQLAEIAES 284
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G +G+V L +RG ++A K I+ N +F+ E + +LRH N+VQ LGV+
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIK-----NDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 159 KHSER-LIFLTEYLRNGSLHDILKKKGK--LDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ L +TEY+ GSL D L+ +G+ L + ++LD+ M YL + +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL NVL E KV+DFGL+K A S G ++ APE R + +
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
DV+SF +++ E++ G ++ R + + P + +++ CWH +
Sbjct: 367 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLD 426
Query: 336 PDRRPTFEEIIFRLEAIQ 353
RPTF ++ +LE I+
Sbjct: 427 AATRPTFLQLREQLEHIR 444
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G +G+V L +RG ++A K I+ N +F+ E + +LRH N+VQ LGV+
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIK-----NDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 159 KHSER-LIFLTEYLRNGSLHDILKKKGK--LDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ L +TEY+ GSL D L+ +G+ L + ++LD+ M YL + +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL NVL E KV+DFGL+K A S G ++ APE R + +
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
DV+SF +++ E++ G ++ R + + P + +++ CWH +
Sbjct: 195 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLD 254
Query: 336 PDRRPTFEEIIFRLEAIQ 353
RP+F ++ +LE I+
Sbjct: 255 AAMRPSFLQLREQLEHIK 272
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G +G+V L +RG ++A K I+ N +F+ E + +LRH N+VQ LGV+
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIK-----NDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 159 KHSER-LIFLTEYLRNGSLHDILKKKGK--LDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ L +TEY+ GSL D L+ +G+ L + ++LD+ M YL + +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 131
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL NVL E KV+DFGL+K A S G ++ APE R ++
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
DV+SF +++ E++ G ++ R + + P + +++ CWH +
Sbjct: 186 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLD 245
Query: 336 PDRRPTFEEIIFRLEAIQ 353
RP+F ++ +LE I+
Sbjct: 246 AAMRPSFLQLREQLEHIK 263
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G +G+V L +RG ++A K I+ N +F+ E + +LRH N+VQ LGV+
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIK-----NDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 159 KHSER-LIFLTEYLRNGSLHDILKKKGK--LDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ L +TEY+ GSL D L+ +G+ L + ++LD+ M YL + +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL NVL E KV+DFGL+K A S G ++ APE R + +
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
DV+SF +++ E++ G ++ R + + P + +++ CWH +
Sbjct: 180 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLD 239
Query: 336 PDRRPTFEEIIFRLEAIQ 353
RP+F ++ +LE I+
Sbjct: 240 AAMRPSFLQLREQLEHIK 257
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 137/268 (51%), Gaps = 15/268 (5%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMG-Y 72
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR---RESYGK 274
L +N+ E +K+ DFGL+ + + + S S++ +GS +MAPEV R + Y
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 275 SVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE 330
DV++F ++++E+ G N D + + R + S P+ +K L+ E
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 248
Query: 331 CWHKNPDRRPTFEEIIFRLEAIQESFQK 358
C K D RP F +I+ +E + S K
Sbjct: 249 CLKKKRDERPLFPQILASIELLARSLPK 276
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 136/268 (50%), Gaps = 15/268 (5%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMG-Y 77
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR---RESYGK 274
L +N+ E +K+ DFGL+ + + + S S++ +GS +MAPEV R + Y
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 275 SVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE 330
DV++F ++++E+ G N D + + R + S P+ +K L+ E
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 253
Query: 331 CWHKNPDRRPTFEEIIFRLEAIQESFQK 358
C K D RP F +I+ +E + S K
Sbjct: 254 CLKKKRDERPLFPQILASIELLARSLPK 281
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 136/268 (50%), Gaps = 15/268 (5%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMG-Y 77
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR---RESYGK 274
L +N+ E +K+ DFGL+ + + + S S++ +GS +MAPEV R + Y
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 275 SVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE 330
DV++F ++++E+ G N D + + R + S P+ +K L+ E
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 253
Query: 331 CWHKNPDRRPTFEEIIFRLEAIQESFQK 358
C K D RP F +I+ +E + S K
Sbjct: 254 CLKKKRDERPLFPQILASIELLARSLPK 281
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 136/268 (50%), Gaps = 15/268 (5%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 18 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMG-Y 74
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR---RESYGK 274
L +N+ E +K+ DFGL+ + + + S S++ +GS +MAPEV R + Y
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 275 SVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE 330
DV++F ++++E+ G N D + + R + S P+ +K L+ E
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 250
Query: 331 CWHKNPDRRPTFEEIIFRLEAIQESFQK 358
C K D RP F +I+ +E + S K
Sbjct: 251 CLKKKRDERPLFPQILASIELLARSLPK 278
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 136/268 (50%), Gaps = 15/268 (5%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 100
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR---RESYGK 274
L +N+ E +K+ DFGL+ + + + S S++ +GS +MAPEV R + Y
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 275 SVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE 330
DV++F ++++E+ G N D + + R + S P+ +K L+ E
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 276
Query: 331 CWHKNPDRRPTFEEIIFRLEAIQESFQK 358
C K D RP F +I+ +E + S K
Sbjct: 277 CLKKKRDERPLFPQILASIELLARSLPK 304
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 136/268 (50%), Gaps = 15/268 (5%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 43 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMG-Y 99
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 156
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR---RESYGK 274
L +N+ E +K+ DFGL+ + + + S S++ +GS +MAPEV R + Y
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 275 SVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE 330
DV++F ++++E+ G N D + + R + S P+ +K L+ E
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 275
Query: 331 CWHKNPDRRPTFEEIIFRLEAIQESFQK 358
C K D RP F +I+ +E + S K
Sbjct: 276 CLKKKRDERPLFPQILASIELLARSLPK 303
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 135/266 (50%), Gaps = 15/266 (5%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMG-Y 72
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR---RESYGK 274
L +N+ E +K+ DFGL+ + + + S S++ +GS +MAPEV R + Y
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 275 SVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE 330
DV++F ++++E+ G N D + + R + S P+ +K L+ E
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 248
Query: 331 CWHKNPDRRPTFEEIIFRLEAIQESF 356
C K D RP F +I+ +E + S
Sbjct: 249 CLKKKRDERPLFPQILASIELLARSL 274
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 6/253 (2%)
Query: 104 YGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSER 163
YG + + R +A K +++ R R F+ E + + HPNI++ GV+
Sbjct: 67 YGRLRVPGQRDVPVAIKALKAGYTE--RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124
Query: 164 LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSN 222
+ +TEY+ NGSL L+ G+ V + GM YL +HRDL N
Sbjct: 125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARN 181
Query: 223 VLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFA 282
VL D KV+DFGLS++ ++ +Y TGG R+ APE ++ + DV+SF
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ G + + E R P + L+ +CWHK+ +RP F
Sbjct: 242 VVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRF 301
Query: 343 EEIIFRLEAIQES 355
+I+ L+A+ S
Sbjct: 302 SQIVSVLDALIRS 314
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 19/270 (7%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYS--YKMTGGTGSYRYMAPEVYR---RESY 272
L +N+ E +K+ DFGL A EK +S ++ +GS +MAPEV R + Y
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGL---ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 273 GKSVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALL 328
DV++F ++++E+ G N D + + R + S P+ +K L+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 246
Query: 329 RECWHKNPDRRPTFEEIIFRLEAIQESFQK 358
EC K D RP F +I+ +E + S K
Sbjct: 247 AECLKKKRDERPLFPQILASIELLARSLPK 276
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 19/270 (7%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 36 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 92
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 149
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYS--YKMTGGTGSYRYMAPEVYR---RESY 272
L +N+ E +K+ DFGL A EK +S ++ +GS +MAPEV R + Y
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGL---ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 273 GKSVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALL 328
DV++F ++++E+ G N D + + R + S P+ +K L+
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 266
Query: 329 RECWHKNPDRRPTFEEIIFRLEAIQESFQK 358
EC K D RP F +I+ +E + S K
Sbjct: 267 AECLKKKRDERPLFPQILASIELLARSLPK 296
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 19/270 (7%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K + + A P+ +F E+G+ +K RH NI+ F+G
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 100
Query: 159 KHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L +T++ SL H + + K + + A A+GM+YLH +IIHRD
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYS--YKMTGGTGSYRYMAPEVYR---RESY 272
L +N+ E +K+ DFGL A EK +S ++ +GS +MAPEV R + Y
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGL---ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 273 GKSVDVFSFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALL 328
DV++F ++++E+ G N D + + R + S P+ +K L+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 274
Query: 329 RECWHKNPDRRPTFEEIIFRLEAIQESFQK 358
EC K D RP F +I+ +E + S K
Sbjct: 275 AECLKKKRDERPLFPQILASIELLARSLPK 304
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 139/268 (51%), Gaps = 15/268 (5%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G VY KW G ++A K ++ + P +F E+ + +K RH NI+ F+G +
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKILKV-VDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 159 KHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ L +T++ SL+ L ++ K + A A+GM+YLH IIHRD
Sbjct: 102 T-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRD 157
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES---YGK 274
+ +N+ E +K+ DFGL+ + + + S S ++ TGS +MAPEV R + +
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATV-KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 275 SVDVFSFALIVHEMFQGG-PSNRADTAVQVADRRAYEDSRPALSSLY---PEPIKALLRE 330
DV+S+ ++++E+ G P + + Q+ + P LS LY P+ +K L+ +
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVAD 276
Query: 331 CWHKNPDRRPTFEEIIFRLEAIQESFQK 358
C K + RP F +I+ +E +Q S K
Sbjct: 277 CVKKVKEERPLFPQILSSIELLQHSLPK 304
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +GEV L R +A KT++ + + R F+ E + + HPNI+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKK-GKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL LKK G+ V I+ GM YL
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM---G 144
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ APE +
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + Q + E R P + L+ +CW
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCW 264
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K + RP F+EI+ L+ +
Sbjct: 265 QKERNSRPKFDEIVNMLDKL 284
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 13/261 (4%)
Query: 99 IDPGAYGEVYLVKWRG--TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G +GEV+ + R T +A K+ R ++ P ++ F++E + ++ HPNIV+ +G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLP--PDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKG-KLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
V + + + E ++ G L+ +G +L T + D A GM YL IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIH 236
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY--RYMAPEVYRRESYG 273
RDL N L E LK++DFG+S+ +E D Y +GG ++ APE Y
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSR--EEADGV-YAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 274 KSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWH 333
DV+SF +++ E F G S + + Q + R L P+ + L+ +CW
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWA 353
Query: 334 KNPDRRPTFEEIIFRLEAIQE 354
P +RP+F I L++I++
Sbjct: 354 YEPGQRPSFSTIYQELQSIRK 374
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 12/261 (4%)
Query: 99 IDPGAYGEVY--LVKW----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIV 152
I G +GEVY ++K + +A KT+++ RV F+ E G+ + H NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMGQFSHHNII 109
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKKK-GKLDPPTAVAYALDIARGMNYLHHHRPH 211
+ GV+ + ++ +TEY+ NG+L L++K G+ V IA GM YL +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN-- 167
Query: 212 AIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL N+L + KV+DFGLS++ ++ +Y +GG R+ APE
Sbjct: 168 -YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 272 YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLREC 331
+ + DV+SF +++ E+ G + + + + R P I L+ +C
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQC 286
Query: 332 WHKNPDRRPTFEEIIFRLEAI 352
W + RRP F +I+ L+ +
Sbjct: 287 WQQERARRPKFADIVSILDKL 307
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 85 -EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 141 AAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 255
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 256 PEERPTFE----YLQAFLEDYFTSTEPQ 279
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 6/253 (2%)
Query: 104 YGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSER 163
YG + + R +A K +++ R R F+ E + + HPNI++ GV+
Sbjct: 67 YGRLRVPGQRDVPVAIKALKAGYTE--RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124
Query: 164 LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSN 222
+ +TEY+ NGSL L+ G+ V + GM YL +HRDL N
Sbjct: 125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARN 181
Query: 223 VLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFA 282
VL D KV+DFGLS++ ++ + TGG R+ APE ++ + DV+SF
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ G + + E R P + L+ +CWHK+ +RP F
Sbjct: 242 VVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRF 301
Query: 343 EEIIFRLEAIQES 355
+I+ L+A+ S
Sbjct: 302 SQIVSVLDALIRS 314
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 287
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 138
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 199 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 258
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 259 QKDRNNRPKFEQIVSILDKL 278
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 19 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 75 -EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 130
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ ++ + + + G ++ APE + DV
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQ--GAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K
Sbjct: 189 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKE 245
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 246 PEERPTFE----YLQAFLEDYFTSTEPQ 269
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 20 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 76 -EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 131
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 132 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 190 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 246
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 247 PEERPTFE----YLQAFLEDYFTSTEPQ 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 85 -EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 255
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 256 PEERPTFE----YLQAFLEDYFTSTEPQ 279
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 18 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 74 -EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 129
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 130 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 188 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 244
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 245 PEERPTFE----YLQAFLEDYFTSTEPQ 268
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 155
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 215
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 216 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 275
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 276 QKDRNNRPKFEQIVSILDKL 295
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 22 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 78 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 133
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 134 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K
Sbjct: 192 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKE 248
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 249 PEERPTFE----YLQAFLEDYFTSTEPQ 272
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 287
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 287
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 287
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +GEV L R +A KT++ + + R F+ E + + HPN+V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLK--VGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ + ++ + E++ NG+L L+K G+ V IA GM YL
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM---G 165
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ Y TGG R+ APE + +
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G D + Q + E R P + L+ +CW
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCW 285
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K RP FE+I+ L+ +
Sbjct: 286 QKERAERPKFEQIVGILDKM 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 287
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 165
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 225
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 226 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 285
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 286 QKDRNNRPKFEQIVSILDKL 305
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +K+RH +VQ V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 85 -EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 255
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 256 PEERPTFE----YLQAFLEDYFTSTEPQ 279
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 13/261 (4%)
Query: 99 IDPGAYGEVYLVKWRG--TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G +GEV+ + R T +A K+ R ++ P ++ F++E + ++ HPNIV+ +G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLP--PDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKG-KLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
V + + + E ++ G L+ +G +L T + D A GM YL IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIH 236
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY--RYMAPEVYRRESYG 273
RDL N L E LK++DFG+S+ +E D +GG ++ APE Y
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSR--EEADGVX-AASGGLRQVPVKWTAPEALNYGRYS 293
Query: 274 KSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWH 333
DV+SF +++ E F G S + + Q + R L P+ + L+ +CW
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWA 353
Query: 334 KNPDRRPTFEEIIFRLEAIQE 354
P +RP+F I L++I++
Sbjct: 354 YEPGQRPSFSTIYQELQSIRK 374
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 129/267 (48%), Gaps = 23/267 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 195 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 251 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 306
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 307 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKE 421
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVP 362
P+ RPTFE L+A E + T P
Sbjct: 422 PEERPTFE----YLQAFLEDYFTSTEP 444
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + + V A I+ M YL IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 259
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 260 DRPSFAEI---HQAFETMFQESSI 280
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 259
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 260 DRPSFAEI---HQAFETMFQESSI 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 256
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 257 DRPSFAEI---HQAFETMFQESSI 277
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 129/267 (48%), Gaps = 23/267 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 195 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 251 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 306
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 307 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKE 421
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVP 362
P+ RPTFE L+A E + T P
Sbjct: 422 PEERPTFE----YLQAFLEDYFTSTEP 444
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ G L D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 85 -EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLI-EDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 255
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 256 PEERPTFE----YLQAFLEDYFTSTEPQ 279
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 149
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 208 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 267
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 268 DRPSFAEI---HQAFETMFQESSI 288
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 26 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V + IA GM Y+ +HRDL
Sbjct: 82 -EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDL 137
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 138 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKE 252
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 253 PEERPTFE----YLQAFLEDYFTSTEPQ 276
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + + V A I+ M YL IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 254
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 255 DRPSFAEI---HQAFETMFQESSI 275
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 256
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 257 DRPSFAEI---HQAFETMFQESSI 277
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 137
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAP-AGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 255
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 256 DRPSFAEI---HQAFETMFQESSI 276
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAP-AGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 256
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 257 DRPSFAEI---HQAFETMFQESSI 277
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGL+++ ++ +Y GG R+ +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 287
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + + V A I+ M YL IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 254
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 255 DRPSFAEI---HQAFETMFQESSI 275
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + + EY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 85 -EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLI-EDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 255
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 256 PEERPTFE----YLQAFLEDYFTSTEPQ 279
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + + EY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 85 -EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ ++ + + + G ++ APE + DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQ--GAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 255
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 256 PEERPTFE----YLQAFLEDYFTSTEPQ 279
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 26 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V + IA GM Y+ +HRDL
Sbjct: 82 -EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDL 137
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ ++ + + + G ++ APE + DV
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQ--GAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKE 252
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 253 PEERPTFE----YLQAFLEDYFTSTEPQ 276
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + + EY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 85 -EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLI-EDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 255
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 256 PEERPTFE----YLQAFLEDYFTSTEPQ 279
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 21/267 (7%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
G +G+ V R T ++ I + + +F+KE+ + + L HPN+++F+GVL
Sbjct: 21 GCFGQAIKVTHRETG-EVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD 79
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTA-VAYALDIARGMNYLHHHRPHAIIHRDLTP 220
+RL F+TEY++ G+L I+K P + V++A DIA GM YLH IIHRDL
Sbjct: 80 KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNS 136
Query: 221 SNVLQDEAGHLKVTDFGLSKIAQEKDSYS-----------YKMTGGTGSYRYMAPEVYRR 269
N L E ++ V DFGL+++ ++ + K G+ +MAPE+
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 196
Query: 270 ESYGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKA 326
SY + VDVFSF +++ E+ P T + R + D R + P
Sbjct: 197 RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD-RYCPPNCPPSFFPI 255
Query: 327 LLRECWHKNPDRRPTFEEIIFRLEAIQ 353
+R C +P++RP+F ++ LE ++
Sbjct: 256 TVR-CCDLDPEKRPSFVKLEHWLETLR 281
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 129/267 (48%), Gaps = 23/267 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 278 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 334 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 389
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 390 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K
Sbjct: 448 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKE 504
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVP 362
P+ RPTFE L+A E + T P
Sbjct: 505 PEERPTFE----YLQAFLEDYFTSTEP 527
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TEY+ NGSL L+K + V IA GM YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGL ++ ++ +Y GG R+ +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 287
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 126/282 (44%), Gaps = 11/282 (3%)
Query: 77 PLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKW-----RGTEIAAKTIRSSIASNPR 131
P R F + ++ I G +GEV + R +A KT+++ +
Sbjct: 15 PNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD--K 72
Query: 132 VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKK-GKLDPPT 190
R F+ E + + HPNI+ GV+ + ++ +TEY+ NGSL L+K G+
Sbjct: 73 QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ 132
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSY 250
V I GM YL + +HRDL N+L + KV+DFG+S++ ++ +Y
Sbjct: 133 LVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 189
Query: 251 KMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYE 310
GG R+ APE + + DV+S+ +++ E+ G D + Q + E
Sbjct: 190 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 249
Query: 311 DSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R P + L+ +CW K RP F +I+ L+ +
Sbjct: 250 GYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 129/267 (48%), Gaps = 23/267 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 196 GCFGEVWMGTWNGTTRVAIKTLKPGNMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 252 -EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 307
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL ++ E + Y+ + G ++ APE + DV
Sbjct: 308 RAANILVGENLVCKVADFGLGRLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 366 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 422
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVP 362
P+ RPTFE L+A E + T P
Sbjct: 423 PEERPTFE----YLQAFLEDYFTSTEP 445
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 14/259 (5%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 140
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 199 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 258
Query: 338 RRPTFEEIIFRLEAI-QES 355
RP+F EI E + QES
Sbjct: 259 DRPSFAEIHQAFETMFQES 277
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 259
Query: 338 RRPTFEEIIFRLEAIQESFQK 358
RP+F EI +A + FQ+
Sbjct: 260 DRPSFAEI---HQAFETMFQE 277
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 254
Query: 338 RRPTFEEIIFRLEAIQESFQK 358
RP+F EI +A + FQ+
Sbjct: 255 DRPSFAEI---HQAFETMFQE 272
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 125/278 (44%), Gaps = 11/278 (3%)
Query: 81 ARSFGHVVICKILEDRGGIDPGAYGEVYLVKW-----RGTEIAAKTIRSSIASNPRVRNS 135
R F + ++ I G +GEV + R +A KT+++ + R
Sbjct: 4 VREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD--KQRRD 61
Query: 136 FMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKK-GKLDPPTAVAY 194
F+ E + + HPNI+ GV+ + ++ +TEY+ NGSL L+K G+ V
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 121
Query: 195 ALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTG 254
I GM YL + +HRDL N+L + KV+DFG+S++ ++ +Y G
Sbjct: 122 LRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 255 GTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRP 314
G R+ APE + + DV+S+ +++ E+ G D + Q + E R
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL 238
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
P + L+ +CW K RP F +I+ L+ +
Sbjct: 239 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TE + NGSL L+K + V IA GM YL
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 138
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 199 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 258
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 259 QKDRNNRPKFEQIVSILDKL 278
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 254
Query: 338 RRPTFEEI 345
RP+F EI
Sbjct: 255 DRPSFAEI 262
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 128/268 (47%), Gaps = 23/268 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + + EY+ G L D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 85 -EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 141 RAANILVGENLVCKVADFGLARLI-EDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKD 255
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVPS 363
P+ RPTFE L+A E + T P
Sbjct: 256 PEERPTFE----YLQAFLEDYFTSTEPQ 279
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TE + NGSL L+K + V IA GM YL
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 287
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+ E++ G+L D L++ + + V A I+ M YL IHRD
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 254
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 255 DRPSFAEI---HQAFETMFQESSI 275
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 6/237 (2%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSL 176
+A KT+++ + R F+ E + + HPNI+ GV+ + ++ +TEY+ NGSL
Sbjct: 39 VAIKTLKAGYTD--KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 96
Query: 177 HDILKKK-GKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTD 235
L+K G+ V I GM YL + +HRDL N+L + KV+D
Sbjct: 97 DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSD 153
Query: 236 FGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSN 295
FG+S++ ++ +Y GG R+ APE + + DV+S+ +++ E+ G
Sbjct: 154 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
Query: 296 RADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
D + Q + E R P + L+ +CW K RP F +I+ L+ +
Sbjct: 214 YWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 128/267 (47%), Gaps = 23/267 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W GT +A KT++ S +F++E + +KLRH +VQ V+
Sbjct: 195 GCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 161 SERLIFLTEYLRNGSLHDILK-KKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + + EY+ GSL D LK + GK L P V A IA GM Y+ +HRDL
Sbjct: 251 -EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 306
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L E KV DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 307 RAANILVGENLVCKVADFGLARLI-EDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G + V R Y P PE + L+ +CW K
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC---PESLHDLMCQCWRKE 421
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKTVP 362
P+ RPTFE L+A E + T P
Sbjct: 422 PEERPTFE----YLQAFLEDYFTSTEP 444
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+ E++ G+L D L++ + + V A I+ M YL IHRD
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 254
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 255 DRPSFAEI---HQAFETMFQESSI 275
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
+ G +GEV L + +A KT++ + + R F+ E + + HPNI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S+ ++ +TE + NGSL L+K + V IA GM YL
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRDL N+L + KV+DFGLS++ ++ +Y GG R+ +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
+ DV+S+ +++ E+ G + + Q + E R P + L+ +CW
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW 287
Query: 333 HKNPDRRPTFEEIIFRLEAI 352
K+ + RP FE+I+ L+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + + V A I+ M YL IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+++ G ++ APE + D
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMT-GDTFT-AHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S +D R PE + L+R CW NP
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 252
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 253 DRPSFAEI---HQAFETMFQESSI 273
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 231 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + + V A I+ M YL IHR+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRN 343
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 401
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 402 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 461
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 462 DRPSFAEI---HQAFETMFQESSI 482
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 270 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHR+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRN 382
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 440
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 441 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 500
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 501 DRPSFAEI---HQAFETMFQESSI 521
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 102 GAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ + T++A KT++ S +F++E L + L+H +V+ V+
Sbjct: 24 GQFGEVWMGYYNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 161 SERLIFLTEYLRNGSLHDILK--KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK + GK+ P + ++ IA GM Y+ IHRDL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 136
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+NVL E+ K+ DFGL+++ E + Y+ + G ++ APE + DV
Sbjct: 137 RAANVLVSESLMCKIADFGLARVI-EDNEYTAR-EGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF ++++E+ G R + V A + Y P + + P+ + +++ CW +
Sbjct: 195 WSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYR--MPRVENC-PDELYDIMKMCWKEK 251
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKT 360
+ RPTF+ L+++ + F T
Sbjct: 252 AEERPTFD----YLQSVLDDFYTAT 272
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHR+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRN 340
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 398
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 399 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 458
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 459 DRPSFAEI---HQAFETMFQESSI 479
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 14/259 (5%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ ++ G ++ APE + D
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAH--AGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 259
Query: 338 RRPTFEEIIFRLEAI-QES 355
RP+F EI E + QES
Sbjct: 260 DRPSFAEIHQAFETMFQES 278
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 13/284 (4%)
Query: 77 PLSDARSFGHVVICKILEDRGGIDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPR 131
P R F + ++ I G +GEV L R +A KT++S +
Sbjct: 19 PNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE--K 76
Query: 132 VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKK-GKLDPPT 190
R F+ E + + HPN++ GV+ S ++ +TE++ NGSL L++ G+
Sbjct: 77 QRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ 136
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQE--KDSY 248
V IA GM YL +HRDL N+L + KV+DFGLS+ ++ D
Sbjct: 137 LVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 249 SYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRA 308
GG R+ APE + + + DV+S+ +++ E+ G D Q
Sbjct: 194 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
Query: 309 YEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
+D R P + L+ +CW K+ + RP F +I+ L+ +
Sbjct: 254 EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 36 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 91
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 92 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 149
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 150 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 206
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
YS + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 207 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 264
Query: 306 RRAYE-DSRPALSSLY-PEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y R L Y P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 265 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 317
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 9 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 64
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 65 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 122
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 123 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 179
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
YS + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 180 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 237
Query: 306 RRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y + R P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 238 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 290
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ E++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ D+Y+ G ++ APE + D
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMT-GDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 259
Query: 338 RRPTFEEIIFRLEAIQESFQK 358
RP+F EI +A + FQ+
Sbjct: 260 DRPSFAEI---HQAFETMFQE 277
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 14 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 69
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 70 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 127
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 128 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
YS + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 185 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 242
Query: 306 RRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y + R P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 243 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 295
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 35 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 90
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 91 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 148
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 149 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 205
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
YS + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 206 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 263
Query: 306 RRAYE-DSRPALSSLY-PEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y R L Y P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 264 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 316
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 17 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 72
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 130
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 131 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
YS + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 245
Query: 306 RRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y + R P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 246 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 16 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 71
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 129
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 130 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
YS + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 187 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 244
Query: 306 RRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y + R P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 245 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 12 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 67
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 68 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 125
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 126 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
YS + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 240
Query: 306 RRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y + R P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 241 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 17 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 72
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 130
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 131 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
YS + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 245
Query: 306 RRAYE-DSRPALSSLY-PEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y R L Y P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 246 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 160 HSERLIFLTEYLRNGSLHDILKK--KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ E++ G+L D L++ + +++ + A I+ M YL IHRD
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 137
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ ++ G ++ APE + D
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAH--AGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S + +D R PE + L+R CW NP
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 255
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 256 DRPSFAEI---HQAFETMFQESSI 276
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 23/253 (9%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G V KWRG ++A K I+ S + F++E + L H +VQ GV
Sbjct: 15 GQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ +TEY+ NG L + L++ + + + D+ M YL + +HRDL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 127
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N L ++ G +KV+DFGLS+ + D Y+ G R+ PEV + D++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 280 SFALIVHEMFQGG--PSNR---ADTAVQVAD-RRAYEDSRPALSSLYPEPIKALLRECWH 333
+F +++ E++ G P R ++TA +A R Y RP L+S E + ++ CWH
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLAS---EKVYTIMYSCWH 239
Query: 334 KNPDRRPTFEEII 346
+ D RPTF+ ++
Sbjct: 240 EKADERPTFKILL 252
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 23/253 (9%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G V KWRG ++A K I+ S + F++E + L H +VQ GV
Sbjct: 19 GQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ +TEY+ NG L + L++ + + + D+ M YL + +HRDL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 131
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N L ++ G +KV+DFGLS+ + D Y+ G R+ PEV + D++
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 280 SFALIVHEMFQGG--PSNR---ADTAVQVAD-RRAYEDSRPALSSLYPEPIKALLRECWH 333
+F +++ E++ G P R ++TA +A R Y RP L+S E + ++ CWH
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLAS---EKVYTIMYSCWH 243
Query: 334 KNPDRRPTFEEII 346
+ D RPTF+ ++
Sbjct: 244 EKADERPTFKILL 256
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 15 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 70
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 128
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 129 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
YS + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 186 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 243
Query: 306 RRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y + R P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 244 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V+L++ R G A K ++ I + E + + HP I++ G +
Sbjct: 17 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ 76
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
++++ + +Y+ G L +L+K + P A YA ++ + YLH II+RDL
Sbjct: 77 DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLK 133
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L D+ GH+K+TDFG +K + +Y + G Y+APEV + Y KS+D +
Sbjct: 134 PENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTPD---YIAPEVVSTKPYNKSIDWW 187
Query: 280 SFALIVHEMFQG 291
SF ++++EM G
Sbjct: 188 SFGILIYEMLAG 199
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 13/284 (4%)
Query: 77 PLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG-----TEIAAKTIRSSIASNPR 131
P R F + ++ I G +GEV + + + +A KT++ R
Sbjct: 2 PNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTE--R 59
Query: 132 VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPT 190
R F+ E + + HPNI++ GV+ +S ++ LTE++ NG+L L+ G+
Sbjct: 60 QRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ 119
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSY 250
V IA GM YL + +HRDL N+L + KV+DFGLS+ +E S
Sbjct: 120 LVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 251 KMT--GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRA 308
+ + GG R+ APE + + D +S+ +++ E+ G D + Q
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 236
Query: 309 YEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
+D R P + L+ +CW K+ + RP F +++ L+ +
Sbjct: 237 EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 23/253 (9%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G V KWRG ++A K I+ S + F++E + L H +VQ GV
Sbjct: 20 GQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ +TEY+ NG L + L++ + + + D+ M YL + +HRDL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N L ++ G +KV+DFGLS+ + D Y+ G R+ PEV + D++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 280 SFALIVHEMFQGG--PSNR---ADTAVQVAD-RRAYEDSRPALSSLYPEPIKALLRECWH 333
+F +++ E++ G P R ++TA +A R Y RP L+S E + ++ CWH
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLAS---EKVYTIMYSCWH 244
Query: 334 KNPDRRPTFEEII 346
+ D RPTF+ ++
Sbjct: 245 EKADERPTFKILL 257
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 23/256 (8%)
Query: 99 IDPGAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
+ G +G V KWRG ++A K I+ S + F++E + L H +VQ GV
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 158 LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ +TEY+ NG L + L++ + + + D+ M YL + +HR
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHR 135
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
DL N L ++ G +KV+DFGLS+ + D Y+ G R+ PEV +
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYT-SSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 277 DVFSFALIVHEMFQGG--PSNR---ADTAVQVAD-RRAYEDSRPALSSLYPEPIKALLRE 330
D+++F +++ E++ G P R ++TA +A R Y RP L+S E + ++
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLAS---EKVYTIMYS 247
Query: 331 CWHKNPDRRPTFEEII 346
CWH+ D RPTF+ ++
Sbjct: 248 CWHEKADERPTFKILL 263
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 140/280 (50%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 21 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 77
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 134
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ + K G + + Y APE
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTESK 193
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 253
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 254 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 23/253 (9%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G V KWRG ++A K I+ S + F++E + L H +VQ GV
Sbjct: 35 GQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ +TEY+ NG L + L++ + + + D+ M YL + +HRDL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 147
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N L ++ G +KV+DFGLS+ + + S G R+ PEV + D++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETS--SVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 280 SFALIVHEMFQGG--PSNR---ADTAVQVAD-RRAYEDSRPALSSLYPEPIKALLRECWH 333
+F +++ E++ G P R ++TA +A R Y RP L+S E + ++ CWH
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLAS---EKVYTIMYSCWH 259
Query: 334 KNPDRRPTFEEII 346
+ D RPTF+ ++
Sbjct: 260 EKADERPTFKILL 272
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 23/253 (9%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G V KWRG ++A K I+ S + F++E + L H +VQ GV
Sbjct: 35 GQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ +TEY+ NG L + L++ + + + D+ M YL + +HRDL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 147
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N L ++ G +KV+DFGLS+ + D Y+ G R+ PEV + D++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 280 SFALIVHEMFQGG--PSNR---ADTAVQVAD-RRAYEDSRPALSSLYPEPIKALLRECWH 333
+F +++ E++ G P R ++TA +A R Y RP L+S E + ++ CWH
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLAS---EKVYTIMYSCWH 259
Query: 334 KNPDRRPTFEEII 346
+ D RPTF+ ++
Sbjct: 260 EKADERPTFKILL 272
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 21/289 (7%)
Query: 73 WGRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG-----TEIAAKTIRSSIA 127
WG + +V I ++ I G +GEV + + + +A KT++
Sbjct: 2 WGSMEFAKEIDVSYVKIEEV------IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYT 55
Query: 128 SNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKL 186
R R F+ E + + HPNI++ GV+ +S ++ LTE++ NG+L L+ G+
Sbjct: 56 E--RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF 113
Query: 187 DPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
V IA GM YL + +HRDL N+L + KV+DFGLS+ +E
Sbjct: 114 TVIQLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS 170
Query: 247 S---YSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQV 303
S Y+ + GG R+ APE + + D +S+ +++ E+ G D + Q
Sbjct: 171 SDPTYTSSL-GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 229
Query: 304 ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
+D R P + L+ +CW K+ + RP F +++ L+ +
Sbjct: 230 VINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 140/280 (50%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 22 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 78
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 135
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHR+L N+L + +K+ DFGL+K+ Q+K+ Y K G + + Y APE
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESK 194
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 195 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 254
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 255 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 23/253 (9%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G V KWRG ++A K I+ S + F++E + L H +VQ GV
Sbjct: 20 GQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ +TEY+ NG L + L++ + + + D+ M YL + +HRDL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N L ++ G +KV+DFGLS+ + + S + G R+ PEV + D++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR--GSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 280 SFALIVHEMFQGG--PSNR---ADTAVQVAD-RRAYEDSRPALSSLYPEPIKALLRECWH 333
+F +++ E++ G P R ++TA +A R Y RP L+S E + ++ CWH
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLAS---EKVYTIMYSCWH 244
Query: 334 KNPDRRPTFEEII 346
+ D RPTF+ ++
Sbjct: 245 EKADERPTFKILL 257
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 102 GAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ W G T++A KT++ S SF++E + +KL+H +VQ V+
Sbjct: 20 GQFGEVWMGTWNGNTKVAIKTLKPGTMSP----ESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TEY+ GSL D LK +G+ L P V A +A GM Y+ IHRDL
Sbjct: 76 -EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDL 131
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L K+ DFGL+++ ++ + + + G ++ APE + DV
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQ--GAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 279 FSFALIVHEMFQGG-----PSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWH 333
+SF +++ E+ G N + QV R Y P P + L+ CW
Sbjct: 190 WSFGILLTELVTKGRVPYPGMNNREVLEQV--ERGYRMPCPQDC---PISLHELMIHCWK 244
Query: 334 KNPDRRPTFEEIIFRLEAIQESFQKKTVPS 363
K+P+ RPTFE L++ E + T P
Sbjct: 245 KDPEERPTFE----YLQSFLEDYFTATEPQ 270
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +GEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+TE++ G+L D L++ + + V A I+ M YL IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ ++ G ++ APE + D
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAH--AGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S +D R PE + L+R CW NP
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 252
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 253 DRPSFAEI---HQAFETMFQESSI 273
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 27 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 83
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 140
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 199
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 200 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 259
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 260 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 26 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 82
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 139
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 198
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 199 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 258
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 259 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 24 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 80
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 137
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 196
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 256
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 257 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 28 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 84
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 141
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 200
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 201 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 260
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 261 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 39 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 95
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 152
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 211
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 212 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 271
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 272 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 39 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 95
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 152
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 211
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 212 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 271
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 272 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 102 GAYGEVYLVKWRG---------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V L + G T++A K ++S + + + + E+ + + + +H NI
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNI 96
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKK----------------GKLDPPTAVAYA 195
+ LG L + EY G+L + L+ + +L V+ A
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCA 156
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
+ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K T G
Sbjct: 157 YQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNG 212
Query: 256 TGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+SF +++ E+F G S V+ + E R
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 272
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
S + ++R+CWH P +RPTF++++ L+ I
Sbjct: 273 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 21 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 77
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 134
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 193
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 253
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 254 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 25 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 81
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 138
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 197
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 198 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 257
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 258 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 102 GAYGEVYLVKWRG---------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V L + G T++A K ++S + + + + E+ + + + +H NI
Sbjct: 24 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNI 81
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKK----------------GKLDPPTAVAYA 195
+ LG L + EY G+L + L+ + +L V+ A
Sbjct: 82 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCA 141
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
+ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K T G
Sbjct: 142 YQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNG 197
Query: 256 TGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+SF +++ E+F G S V+ + E R
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 257
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
S + ++R+CWH P +RPTF++++ L+ I
Sbjct: 258 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 20 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 76
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 133
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 192
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 193 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 252
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 253 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+ E++ G+L D L++ + + V A I+ M YL IHRD
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L N L E +KV DFGLS++ ++ G ++ APE + D
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAH--AGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
V++F +++ E+ G S +D R PE + L+R CW NP
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 252
Query: 338 RRPTFEEIIFRLEAIQESFQKKTV 361
RP+F EI +A + FQ+ ++
Sbjct: 253 DRPSFAEI---HQAFETMFQESSI 273
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 21 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 77
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 134
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 193
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 253
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 254 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 102 GAYGEVYLVKWRG---------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V L + G T++A K ++S + + + + E+ + + + +H NI
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNI 96
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG----------------KLDPPTAVAYA 195
+ LG L + EY G+L + L+ + +L V+ A
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCA 156
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
+ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K T G
Sbjct: 157 YQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNG 212
Query: 256 TGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+SF +++ E+F G S V+ + E R
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 272
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
S + ++R+CWH P +RPTF++++ L+ I
Sbjct: 273 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 102 GAYGEVYLVKWRG---------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V L + G T++A K ++S + + + + E+ + + + +H NI
Sbjct: 31 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNI 88
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKK----------------GKLDPPTAVAYA 195
+ LG L + EY G+L + L+ + +L V+ A
Sbjct: 89 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 148
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
+ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K T G
Sbjct: 149 YQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNG 204
Query: 256 TGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+SF +++ E+F G S V+ + E R
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 264
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
S + ++R+CWH P +RPTF++++ L+ I
Sbjct: 265 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 102 GAYGEVYLVKWRG---------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V L + G T++A K ++S + + + + E+ + + + +H NI
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNI 96
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKK----------------GKLDPPTAVAYA 195
+ LG L + EY G+L + L+ + +L V+ A
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 156
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
+ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K T G
Sbjct: 157 YQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNG 212
Query: 256 TGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+SF +++ E+F G S V+ + E R
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 272
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
S + ++R+CWH P +RPTF++++ L+ I
Sbjct: 273 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 102 GAYGEVYLVKWRG---------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V L + G T++A K ++S + + + + E+ + + + +H NI
Sbjct: 32 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNI 89
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKK----------------GKLDPPTAVAYA 195
+ LG L + EY G+L + L+ + +L V+ A
Sbjct: 90 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 149
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
+ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K T G
Sbjct: 150 YQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNG 205
Query: 256 TGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+SF +++ E+F G S V+ + E R
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 265
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
S + ++R+CWH P +RPTF++++ L+ I
Sbjct: 266 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 102 GAYGEVYLVKWRG---------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V L + G T++A K ++S + + + + E+ + + + +H NI
Sbjct: 28 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNI 85
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKK----------------GKLDPPTAVAYA 195
+ LG L + EY G+L + L+ + +L V+ A
Sbjct: 86 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 145
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
+ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K T G
Sbjct: 146 YQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNG 201
Query: 256 TGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+SF +++ E+F G S V+ + E R
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 261
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
S + ++R+CWH P +RPTF++++ L+ I
Sbjct: 262 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 138/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 52 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 108
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 165
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 224
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 225 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 284
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I++
Sbjct: 285 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 131/252 (51%), Gaps = 32/252 (12%)
Query: 102 GAYGEVYLVK-WRGTEI----AAKTIR-SSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G++G+V+LVK G++ A K ++ +++ RVR +++ + ++ HP IV+
Sbjct: 36 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--EVNHPFIVKLH 93
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ +L + ++LR G L L K+ Y ++A +++LH II+
Sbjct: 94 YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIY 150
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSK--IAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYG 273
RDL P N+L DE GH+K+TDFGLSK I EK +YS+ G+ YMAPEV R +
Sbjct: 151 RDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-----CGTVEYMAPEVVNRRGHT 205
Query: 274 KSVDVFSFALIVHEM------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKAL 327
+S D +SF +++ EM FQG +R +T + + P L PE ++L
Sbjct: 206 QSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKAKL---GMPQF--LSPEA-QSL 257
Query: 328 LRECWHKNPDRR 339
LR + +NP R
Sbjct: 258 LRMLFKRNPANR 269
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G ++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 140
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 141 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 253
Query: 340 PTFEEII 346
P E++
Sbjct: 254 PMLREVL 260
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 138/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 19 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 75
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+K K ++D + Y I +GM YL R
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 132
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 191
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 192 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 251
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I++
Sbjct: 252 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 131/252 (51%), Gaps = 32/252 (12%)
Query: 102 GAYGEVYLVK-WRGTEI----AAKTIR-SSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G++G+V+LVK G++ A K ++ +++ RVR +++ + ++ HP IV+
Sbjct: 35 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--EVNHPFIVKLH 92
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ +L + ++LR G L L K+ Y ++A +++LH II+
Sbjct: 93 YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIY 149
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSK--IAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYG 273
RDL P N+L DE GH+K+TDFGLSK I EK +YS+ G+ YMAPEV R +
Sbjct: 150 RDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-----CGTVEYMAPEVVNRRGHT 204
Query: 274 KSVDVFSFALIVHEM------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKAL 327
+S D +SF +++ EM FQG +R +T + + P L PE ++L
Sbjct: 205 QSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKAKL---GMPQF--LSPEA-QSL 256
Query: 328 LRECWHKNPDRR 339
LR + +NP R
Sbjct: 257 LRMLFKRNPANR 268
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 102 GAYGEVYLVKWRG---------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V L + G T++A K ++S + + + + E+ + + + +H NI
Sbjct: 80 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNI 137
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKK----------------GKLDPPTAVAYA 195
+ LG L + EY G+L + L+ + +L V+ A
Sbjct: 138 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 197
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
+ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K T G
Sbjct: 198 YQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNG 253
Query: 256 TGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+SF +++ E+F G S V+ + E R
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 313
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
S + ++R+CWH P +RPTF++++ L+ I
Sbjct: 314 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 102 GAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ + T++A KT++ S +F++E L + L+H +V+ V+
Sbjct: 23 GQFGEVWMGYYNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 161 SERLIFLTEYLRNGSLHDILK--KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TE++ GSL D LK + GK+ P + ++ IA GM Y+ IHRDL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 135
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+NVL E+ K+ DFGL+++ E + Y+ + G ++ APE + +V
Sbjct: 136 RAANVLVSESLMCKIADFGLARVI-EDNEYTAR-EGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF ++++E+ G R + V A + Y P + + P+ + +++ CW +
Sbjct: 194 WSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYR--MPRMENC-PDELYDIMKMCWKEK 250
Query: 336 PDRRPTFEEIIFRLEAIQESFQKKT 360
+ RPTF+ L+++ + F T
Sbjct: 251 AEERPTFD----YLQSVLDDFYTAT 271
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 16 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 71
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 129
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM YL + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 130 TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
S + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 187 XXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 244
Query: 306 RRAYE-DSRPALSSLY-PEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y R L Y P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 245 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 24/260 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 11 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 63
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 64 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ E + Y+ + G ++ APE
Sbjct: 123 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAR-EGAKFPIKWTAPEAI 177
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 233
Query: 324 IKALLRECWHKNPDRRPTFE 343
+ L+R CW + P+ RPTF+
Sbjct: 234 LYQLMRLCWKERPEDRPTFD 253
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 131/252 (51%), Gaps = 32/252 (12%)
Query: 102 GAYGEVYLVK-WRGTEI----AAKTIR-SSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G++G+V+LVK G++ A K ++ +++ RVR +++ + ++ HP IV+
Sbjct: 35 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--EVNHPFIVKLH 92
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ +L + ++LR G L L K+ Y ++A +++LH II+
Sbjct: 93 YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIY 149
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSK--IAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYG 273
RDL P N+L DE GH+K+TDFGLSK I EK +YS+ G+ YMAPEV R +
Sbjct: 150 RDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-----CGTVEYMAPEVVNRRGHT 204
Query: 274 KSVDVFSFALIVHEM------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKAL 327
+S D +SF +++ EM FQG +R +T + + P L PE ++L
Sbjct: 205 QSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKAKL---GMPQF--LSPEA-QSL 256
Query: 328 LRECWHKNPDRR 339
LR + +NP R
Sbjct: 257 LRMLFKRNPANR 268
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 136/277 (49%), Gaps = 28/277 (10%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 16 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 68
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ ++ + + + G ++ APE
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI 182
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 238
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKT 360
+ L+R CW + P+ RPTF+ L ++ E F T
Sbjct: 239 LYQLMRLCWKERPEDRPTFD----YLRSVLEDFFTAT 271
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 136 PENLLLGSAGELKIADFGWSVHAP-----SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 247
Query: 339 RPTFEEII 346
RP E++
Sbjct: 248 RPMLREVL 255
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 136/277 (49%), Gaps = 28/277 (10%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 17 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 69
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 70 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ ++ + + + G ++ APE
Sbjct: 129 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI 183
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 184 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 239
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKT 360
+ L+R CW + P+ RPTF+ L ++ E F T
Sbjct: 240 LYQLMRLCWKERPEDRPTFD----YLRSVLEDFFTAT 272
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 136
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T +G+ Y+ PE+ + + VD++
Sbjct: 137 PENLLLGSAGELKIADFGWSCHAP-----SSRRTTLSGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 249
Query: 340 PTFEEII 346
P E++
Sbjct: 250 PMLREVL 256
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 24/260 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 25 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 77
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 78 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ ++ + + + G ++ APE
Sbjct: 137 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI 191
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 192 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 247
Query: 324 IKALLRECWHKNPDRRPTFE 343
+ L+R CW + P+ RPTF+
Sbjct: 248 LYQLMRLCWKERPEDRPTFD 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 136/277 (49%), Gaps = 28/277 (10%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 18 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 70
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 71 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ ++ + + + G ++ APE
Sbjct: 130 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI 184
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 185 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 240
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKT 360
+ L+R CW + P+ RPTF+ L ++ E F T
Sbjct: 241 LYQLMRLCWKERPEDRPTFD----YLRSVLEDFFTAT 273
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 136 PENLLLGSAGELKIADFGWSVHAP-----SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 248
Query: 340 PTFEEII 346
P E++
Sbjct: 249 PMLREVL 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 140
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 141 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 252
Query: 339 RPTFEEII 346
RP E++
Sbjct: 253 RPMLREVL 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 28/277 (10%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 16 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 68
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ E + Y+ + G ++ APE
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAR-EGAKFPIKWTAPEAI 182
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 238
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKT 360
+ L+R CW + P+ RPTF+ L ++ E F T
Sbjct: 239 LYQLMRLCWKERPEDRPTFD----YLRSVLEDFFTAT 271
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 136
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 137 PENLLLGSAGELKIADFGWSVHAP-----SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 249
Query: 340 PTFEEII 346
P E++
Sbjct: 250 PMLREVL 256
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 24/260 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 22 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 74
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ E + Y+ + G ++ APE
Sbjct: 134 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAR-EGAKFPIKWTAPEAI 188
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 244
Query: 324 IKALLRECWHKNPDRRPTFE 343
+ L+R CW + P+ RPTF+
Sbjct: 245 LYQLMRLCWKERPEDRPTFD 264
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 24/260 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 21 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 73
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 74 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ E + Y+ + G ++ APE
Sbjct: 133 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAR-EGAKFPIKWTAPEAI 187
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 243
Query: 324 IKALLRECWHKNPDRRPTFE 343
+ L+R CW + P+ RPTF+
Sbjct: 244 LYQLMRLCWKERPEDRPTFD 263
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 136 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 248
Query: 340 PTFEEII 346
P E++
Sbjct: 249 PMLREVL 255
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 24/260 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 24 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 76
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 77 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ ++ + + + G ++ APE
Sbjct: 136 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI 190
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 191 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 246
Query: 324 IKALLRECWHKNPDRRPTFE 343
+ L+R CW + P+ RPTF+
Sbjct: 247 LYQLMRLCWKERPEDRPTFD 266
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL K R +A K + + V + +E+ + LRHPNI++ G
Sbjct: 16 GKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 75
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 76 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 133 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 187
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 188 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 244
Query: 339 RPTFEEII 346
RP E++
Sbjct: 245 RPMLREVL 252
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 32/252 (12%)
Query: 102 GAYGEVYLVKW-----RGTEIAAKTIR-SSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G++G+V+LV+ G A K ++ +++ RVR E + + HP +V+
Sbjct: 39 GSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM--ERDILADVNHPFVVKLH 96
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ +L + ++LR G L L K+ Y ++A G+++LH II+
Sbjct: 97 YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH---SLGIIY 153
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSK--IAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYG 273
RDL P N+L DE GH+K+TDFGLSK I EK +YS+ G+ YMAPEV R+ +
Sbjct: 154 RDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF-----CGTVEYMAPEVVNRQGHS 208
Query: 274 KSVDVFSFALIVHEM------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKAL 327
S D +S+ +++ EM FQG +R +T + ++ + ++L
Sbjct: 209 HSADWWSYGVLMFEMLTGSLPFQG--KDRKETMTLIL------KAKLGMPQFLSTEAQSL 260
Query: 328 LRECWHKNPDRR 339
LR + +NP R
Sbjct: 261 LRALFKRNPANR 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 140
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 141 PENLLLGSAGELKIADFGWSVHAP-----SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 253
Query: 340 PTFEEII 346
P E++
Sbjct: 254 PMLREVL 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 138
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 139 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 250
Query: 339 RPTFEEII 346
RP E++
Sbjct: 251 RPMLREVL 258
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 18 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 77
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 78 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 134
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 135 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 189
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 190 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 246
Query: 339 RPTFEEII 346
RP E++
Sbjct: 247 RPMLREVL 254
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 24/260 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 22 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 74
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ ++ + + + G ++ APE
Sbjct: 134 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI 188
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 244
Query: 324 IKALLRECWHKNPDRRPTFE 343
+ L+R CW + P+ RPTF+
Sbjct: 245 LYQLMRLCWKERPEDRPTFD 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 138
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 139 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 251
Query: 340 PTFEEII 346
P E++
Sbjct: 252 PMLREVL 258
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 104
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 161
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 162 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 216
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 217 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 274
Query: 340 PTFEEII 346
P E++
Sbjct: 275 PMLREVL 281
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 23 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 139
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 140 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 195 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 251
Query: 339 RPTFEEII 346
RP E++
Sbjct: 252 RPMLREVL 259
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 24/260 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 16 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 68
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ ++ + + + G ++ APE
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTAPEAI 182
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 238
Query: 324 IKALLRECWHKNPDRRPTFE 343
+ L+R CW + P+ RPTF+
Sbjct: 239 LYQLMRLCWKERPEDRPTFD 258
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 136 PENLLLGSAGELKIADFGWSVHAP-----SSRRTELCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 248
Query: 340 PTFEEII 346
P E++
Sbjct: 249 PMLREVL 255
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 15/263 (5%)
Query: 99 IDPGAYGEVY-----LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +GEV L R +A KT++S + R F+ E + + HPN++
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE--KQRRDFLSEASIMGQFDHPNVIH 72
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKK-GKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV+ S ++ +TE++ NGSL L++ G+ V IA GM YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--- 129
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDS---YSYKMTGGTGSYRYMAPEVYRR 269
+HR L N+L + KV+DFGLS+ ++ S Y+ + GG R+ APE +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL-GGKIPIRWTAPEAIQY 188
Query: 270 ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLR 329
+ + DV+S+ +++ E+ G D Q +D R P + L+
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLML 248
Query: 330 ECWHKNPDRRPTFEEIIFRLEAI 352
+CW K+ + RP F +I+ L+ +
Sbjct: 249 DCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 36 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 95
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 96 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 152
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 153 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 207
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 208 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 265
Query: 340 PTFEEII 346
P E++
Sbjct: 266 PMLREVL 272
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 136 PENLLLGSAGELKIADFGWSVHAP-----SSRRTXLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 247
Query: 339 RPTFEEII 346
RP E++
Sbjct: 248 RPMLREVL 255
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 24/260 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 26 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 78
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 79 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ E + Y+ + G ++ APE
Sbjct: 138 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAR-EGAKFPIKWTAPEAI 192
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 248
Query: 324 IKALLRECWHKNPDRRPTFE 343
+ L+R CW + P+ RPTF+
Sbjct: 249 LYQLMRLCWKERPEDRPTFD 268
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 140
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + T G+ Y+ PE + + VD++
Sbjct: 141 PENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLW 195
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 253
Query: 340 PTFEEII 346
P E++
Sbjct: 254 PXLREVL 260
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 32/277 (11%)
Query: 102 GAYGEVYLVKWRG---------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V L + G T++A K ++S + + + + E+ + + + +H NI
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNI 96
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKK----------------GKLDPPTAVAYA 195
+ LG L + EY G+L + L+ + +L V+ A
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCA 156
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
+ARGM YL + IHRDL NVL E +K+ DFGL++ D K T G
Sbjct: 157 YQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK-KTTNG 212
Query: 256 TGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+SF +++ E+F G S V+ + E R
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 272
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
S + ++R+CWH P +RPTF++++ L+ I
Sbjct: 273 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 138
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 139 PENLLLGSAGELKIADFGWSVHAP-----SSRRAALCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 250
Query: 339 RPTFEEII 346
RP E++
Sbjct: 251 RPMLREVL 258
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 29/311 (9%)
Query: 63 KGADVNSLDRWGRTPLSDARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA- 118
+GA+ +D P ++ HVVI I+ I G +G VY GT +
Sbjct: 59 QGANTVHIDLSALNP-ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDN 113
Query: 119 -AKTIRSSIASNPRVRN-----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYL 171
K I ++ S R+ + F+ E + + HPN++ LG+ SE + + Y+
Sbjct: 114 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173
Query: 172 RNGSLHDILKKKGKLDPPTA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEA 228
++G L + ++ + PT + + L +A+GM +L + +HRDL N + DE
Sbjct: 174 KHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEK 228
Query: 229 GHLKVTDFGLSKIAQEKDSYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHE 287
+KV DFGL++ +K+ S + TG ++MA E + + + DV+SF +++ E
Sbjct: 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 288
Query: 288 MFQGGPSNRADTAVQVADRRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEI 345
+ G D V D Y + R P+P+ ++ +CWH + RP+F E+
Sbjct: 289 LMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 346
Query: 346 IFRLEAIQESF 356
+ R+ AI +F
Sbjct: 347 VSRISAIFSTF 357
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 21/251 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY+ W+ +A KT++ F+KE + ++++HPN+VQ LGV
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA---YALDIARGMNYLHHHRPHAIIHR 216
+TEY+ G+L D L++ + + TAV A I+ M YL IHR
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNR-EEVTAVVLLYMATQISSAMEYLEKKN---FIHR 154
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
DL N L E +KV DFGLS++ D+Y+ G ++ APE ++
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRL-MTGDTYT-AHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 277 DVFSFALIVHEMFQGGPSNRADTAV-QVAD--RRAYEDSRPALSSLYPEPIKALLRECWH 333
DV++F +++ E+ G S + QV D + Y +P P + L+R CW
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGC---PPKVYELMRACWK 269
Query: 334 KNPDRRPTFEE 344
+P RP+F E
Sbjct: 270 WSPADRPSFAE 280
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 38/259 (14%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSL 176
+A KT++ A P +R F E L +L+HPN+V LGV+ + L + Y +G L
Sbjct: 42 VAIKTLKDK-AEGP-LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
Query: 177 HDIL----------------KKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTP 220
H+ L K L+PP V IA GM YL H ++H+DL
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLAT 156
Query: 221 SNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT-GSYRYMAPEVYRRESYGKSVDVF 279
NVL + ++K++D GL + D YK+ G + R+MAPE + D++
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAAD--YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 214
Query: 280 SFALIVHEMFQGGPS-----NRADTAVQVADRRAY--EDSRPALSSLYPEPIKALLRECW 332
S+ +++ E+F G + D + +R+ D PA + AL+ ECW
Sbjct: 215 SYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAW-------VYALMIECW 267
Query: 333 HKNPDRRPTFEEIIFRLEA 351
++ P RRP F++I RL A
Sbjct: 268 NEFPSRRPRFKDIHSRLRA 286
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 26/254 (10%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 19 GKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
S R+ + EY G+++ L+K K D Y ++A ++Y H + +IHRD+
Sbjct: 79 DSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK---VIHRDIK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 136 PENLLLGSAGELKIADFGWSVHAP-----SSRRAALCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSL---YP----EPIKALLRECW 332
S ++ +E G P A+T Y+D+ +S + +P E + L+
Sbjct: 191 SLGVLCYEFLVGKPPFEANT---------YQDTYKRISRVEFTFPDFVTEGARDLISRLL 241
Query: 333 HKNPDRRPTFEEII 346
NP +RP E++
Sbjct: 242 KHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 136 PENLLLGSAGELKIADFGWSVHAP-----SSRRAALCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 247
Query: 339 RPTFEEII 346
RP E++
Sbjct: 248 RPMLREVL 255
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 136/277 (49%), Gaps = 28/277 (10%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G +GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 12 KLVERLGA---GQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 64
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 65 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHR+L +N+L + K+ DFGL+++ E + Y+ + G ++ APE
Sbjct: 124 RN---YIHRNLRAANILVSDTLSCKIADFGLARLI-EDNEYTAR-EGAKFPIKWTAPEAI 178
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q +R Y RP PE
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPDNC---PEE 234
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKT 360
+ L+R CW + P+ RPTF+ L ++ E F T
Sbjct: 235 LYQLMRLCWKERPEDRPTFD----YLRSVLEDFFTAT 267
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 53/307 (17%)
Query: 94 EDRGGIDPGAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNI 151
E+ G + G+YG V + + T +A K S + V+ M+E+ L ++LRH N+
Sbjct: 28 ENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES-DDDKMVKKIAMREIKLLKQLRHENL 86
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPH 211
V L V K +R + E++ + L D+ LD Y I G+ + H H
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN-- 144
Query: 212 AIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRRE 270
IIHRD+ P N+L ++G +K+ DFG ++ +A + Y + + Y APE+ +
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE----VATRWYRAPELLVGD 199
Query: 271 -SYGKSVDVFSFALIVHEMFQGGPSNRADTAV---------------------------- 301
YGK+VDV++ +V EMF G P D+ +
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259
Query: 302 -----QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII----FRLEAI 352
++ +R E P LS E + L ++C H +PD+RP E++ F+++
Sbjct: 260 GVRLPEIKEREPLERRYPKLS----EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGF 315
Query: 353 QESFQKK 359
E F ++
Sbjct: 316 AERFSQE 322
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 38/259 (14%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSL 176
+A KT++ A P +R F E L +L+HPN+V LGV+ + L + Y +G L
Sbjct: 59 VAIKTLKDK-AEGP-LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116
Query: 177 HDIL----------------KKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTP 220
H+ L K L+PP V IA GM YL H ++H+DL
Sbjct: 117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLAT 173
Query: 221 SNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT-GSYRYMAPEVYRRESYGKSVDVF 279
NVL + ++K++D GL + D YK+ G + R+MAPE + D++
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAAD--YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 231
Query: 280 SFALIVHEMFQGGPS-----NRADTAVQVADRRAY--EDSRPALSSLYPEPIKALLRECW 332
S+ +++ E+F G + D + +R+ D PA + AL+ ECW
Sbjct: 232 SYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAW-------VYALMIECW 284
Query: 333 HKNPDRRPTFEEIIFRLEA 351
++ P RRP F++I RL A
Sbjct: 285 NEFPSRRPRFKDIHSRLRA 303
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 24 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 80
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + E+L GSL + L+K K ++D + Y I +GM YL R
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--- 137
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 196
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 256
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 257 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G ++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 140
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 141 PENLLLGSAGELKIADFGWSVHAP-----SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 253
Query: 340 PTFEEII 346
P E++
Sbjct: 254 PMLREVL 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 80
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 137
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ +FG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 138 PENLLLGSAGELKIANFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 192
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 193 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 250
Query: 340 PTFEEII 346
P E++
Sbjct: 251 PMLREVL 257
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 29/313 (9%)
Query: 61 LEKGADVNSLDRWGRTPLSDARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEI 117
L G++ +D P ++ HVVI I+ I G +G VY GT +
Sbjct: 3 LHMGSNTVHIDLSALNP-ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLL 57
Query: 118 A--AKTIRSSIASNPRVRN-----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTE 169
K I ++ S R+ + F+ E + + HPN++ LG+ SE + +
Sbjct: 58 DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 117
Query: 170 YLRNGSLHDILKKKGKLDPPTA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQD 226
Y+++G L + ++ + PT + + L +A+GM +L + +HRDL N + D
Sbjct: 118 YMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLD 172
Query: 227 EAGHLKVTDFGLSKIAQEKDSYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIV 285
E +KV DFGL++ +K+ S + TG ++MA E + + + DV+SF +++
Sbjct: 173 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 232
Query: 286 HEMFQGGPSNRADTAVQVADRRAYE-DSRPALSSLY-PEPIKALLRECWHKNPDRRPTFE 343
E+ G D V D Y R L Y P+P+ ++ +CWH + RP+F
Sbjct: 233 WELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 290
Query: 344 EIIFRLEAIQESF 356
E++ R+ AI +F
Sbjct: 291 ELVSRISAIFSTF 303
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 146/310 (47%), Gaps = 29/310 (9%)
Query: 64 GADVNSLDRWGRTPLSDARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA-- 118
GA+ +D P ++ HVVI I+ I G +G VY GT +
Sbjct: 1 GANTVHIDLSALNP-ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDND 55
Query: 119 AKTIRSSIASNPRVRN-----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLR 172
K I ++ S R+ + F+ E + + HPN++ LG+ SE + + Y++
Sbjct: 56 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 115
Query: 173 NGSLHDILKKKGKLDPPTA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAG 229
+G L + ++ + PT + + L +A+GM +L + +HRDL N + DE
Sbjct: 116 HGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKF 170
Query: 230 HLKVTDFGLSKIAQEKDSYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
+KV DFGL++ +K+ S + TG ++MA E + + + DV+SF +++ E+
Sbjct: 171 TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
Query: 289 FQGGPSNRADTAVQVADRRAYE-DSRPALSSLY-PEPIKALLRECWHKNPDRRPTFEEII 346
G D V D Y R L Y P+P+ ++ +CWH + RP+F E++
Sbjct: 231 MTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
Query: 347 FRLEAIQESF 356
R+ AI +F
Sbjct: 289 SRISAIFSTF 298
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 32/280 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V + ++ G +A K ++ S + R F +E+ + + L+H NIV++
Sbjct: 24 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR---DFEREIEILKSLQHDNIVKYK 80
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKKKG-KLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV + R L + EYL GSL D L+ ++D + Y I +GM YL R
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR--- 137
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRDL N+L + +K+ DFGL+K+ Q+K+ K G + + Y APE
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESK 196
Query: 272 YGKSVDVFSFALIVHEMF---QGGPSNRADTAVQVADRRAYE------------DSRPAL 316
+ + DV+SF ++++E+F + S A+ + + + + + R
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 256
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
P+ I ++ ECW+ N ++RP+F ++ R++ I+++
Sbjct: 257 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 138
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ +FG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 139 PENLLLGSAGELKIANFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 250
Query: 339 RPTFEEII 346
RP E++
Sbjct: 251 RPMLREVL 258
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 30/294 (10%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 18 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 73
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 131
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSK--IAQE 244
T + + L +A+GM +L + +HRDL N + DE +KV DFGL++ + +E
Sbjct: 132 TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE 188
Query: 245 KDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVA 304
DS K TG ++MA E + + + DV+SF +++ E+ G D V
Sbjct: 189 FDSVHNK-TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTF 245
Query: 305 DRRAYE-DSRPALSSLY-PEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
D Y R L Y P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 246 DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 299
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 24/260 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
K++E G G GEV++ + G T++A K+++ S ++F+ E L ++L+H
Sbjct: 16 KLVERLGA---GQAGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 68
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHH 207
+V+ V+ E + +TEY+ NGSL D LK KL + A IA GM ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
IHRDL +N+L + K+ DFGL+++ ++ + + + G ++ APE
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTARE--GAKFPIKWTAPEAI 182
Query: 268 RRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
++ DV+SF +++ E+ G P +Q + R Y RP PE
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNC---PEE 238
Query: 324 IKALLRECWHKNPDRRPTFE 343
+ L+R CW + P+ RPTF+
Sbjct: 239 LYQLMRLCWKERPEDRPTFD 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 80
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 137
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 138 PENLLLGSAGELKIADFGWSVHAP-----SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLW 192
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 193 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 250
Query: 340 PTFEEII 346
P E++
Sbjct: 251 PMLREVL 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 138
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 139 PENLLLGSAGELKIADFGWSVHAP-----SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 250
Query: 339 RPTFEEII 346
RP E++
Sbjct: 251 RPMLREVL 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 136
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 137 PENLLLGSAGELKIADFGWSVHAP-----SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 249
Query: 340 PTFEEII 346
P E++
Sbjct: 250 PMLREVL 256
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 15 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 70
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 128
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM +L + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 129 TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
S + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 186 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 243
Query: 306 RRAYE-DSRPALSSLY-PEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y R L Y P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 244 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 138
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 139 PENLLLGSAGELKIADFGWSVHAP-----SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 250
Query: 339 RPTFEEII 346
RP E++
Sbjct: 251 RPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 136 PENLLLGSAGELKIADFGWSVHAP-----SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A+T + R + E + P + E + L+ NP +
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQ 247
Query: 339 RPTFEEII 346
RP E++
Sbjct: 248 RPMLREVL 255
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 17 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 72
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 130
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM +L + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 131 TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
S + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 188 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 245
Query: 306 RRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y + R P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 246 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 104
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K K D Y ++A ++Y H R +IHRD+
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIK 161
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L AG LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 162 PENLLLGSAGELKIADFGWSVHAP-----SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLW 216
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S ++ +E G P A+T + R + + E + L+ NP +R
Sbjct: 217 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQR 274
Query: 340 PTFEEII 346
P E++
Sbjct: 275 PMLREVL 281
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 28/293 (9%)
Query: 81 ARSFGHVVI---CKILEDRGGIDPGAYGEVYLVKWRGTEIA--AKTIRSSIASNPRVRN- 134
++ HVVI I+ I G +G VY GT + K I ++ S R+ +
Sbjct: 18 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVY----HGTLLDNDGKKIHCAVKSLNRITDI 73
Query: 135 ----SFMKELGLWQKLRHPNIVQFLGVLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPP 189
F+ E + + HPN++ LG+ SE + + Y+++G L + ++ + P
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NP 131
Query: 190 TA---VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKD 246
T + + L +A+GM +L + +HRDL N + DE +KV DFGL++ +K+
Sbjct: 132 TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 188
Query: 247 SYS-YKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
S + TG ++MA E + + + DV+SF +++ E+ G D V D
Sbjct: 189 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VNTFD 246
Query: 306 RRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESF 356
Y + R P+P+ ++ +CWH + RP+F E++ R+ AI +F
Sbjct: 247 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 299
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 19/200 (9%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIA-SNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
G++G+V L +GTE A K ++ + + V + +++ L + P + Q
Sbjct: 30 GSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCF 89
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ +RL F+ EY+ G L +++ GK P AV YA +I+ G+ +LH II+RDL
Sbjct: 90 QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHK---RGIIYRDL 146
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT-----GSYRYMAPEVYRRESYG 273
NV+ D GH+K+ DFG+ K + M G T G+ Y+APE+ + YG
Sbjct: 147 KLDNVMLDSEGHIKIADFGMCK--------EHMMDGVTTREFCGTPDYIAPEIIAYQPYG 198
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KSVD +++ ++++EM G P
Sbjct: 199 KSVDWWAYGVLLYEMLAGQP 218
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 19/250 (7%)
Query: 102 GAYGEVYLVKW-RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ + + T++A KT++ S +F+ E + + L+H +V+ V+
Sbjct: 26 GQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAVVT- 80
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGKLDP-PTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TE++ GSL D LK +G P P + ++ IA GM ++ IHRDL
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 137
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L + K+ DFGL+++ E + Y+ + G ++ APE S+ DV
Sbjct: 138 RAANILVSASLVCKIADFGLARVI-EDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G ++ V A R Y RP PE + ++ CW
Sbjct: 196 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC---PEELYNIMMRCWKNR 252
Query: 336 PDRRPTFEEI 345
P+ RPTFE I
Sbjct: 253 PEERPTFEYI 262
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
G +G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 33 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 90
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + EY G+L + L+ + P + Y+ DI
Sbjct: 91 INLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 146
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDLT NVL E +K+ DFGL++ D Y K
Sbjct: 147 VSCTYQLARGMEYLASQK---CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK-K 202
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 262
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 263 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 84 GICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 139
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 196
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 249
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++R+CW + D RP F E+I + Q+ V
Sbjct: 250 MIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 285
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 87 GICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 142
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 199
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 252
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++R+CW + D RP F E+I + Q+ V
Sbjct: 253 MIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 288
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 36 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 93
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 94 GICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 149
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 150 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 206
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 207 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 259
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++R+CW + D RP F E+I + Q+ V
Sbjct: 260 MIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 295
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 19/250 (7%)
Query: 102 GAYGEVYLVKW-RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ + + T++A KT++ S +F+ E + + L+H +V+ V+
Sbjct: 199 GQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAVVT- 253
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGKLDP-PTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TE++ GSL D LK +G P P + ++ IA GM ++ IHRDL
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 310
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L + K+ DFGL+++ E + Y+ + G ++ APE S+ DV
Sbjct: 311 RAANILVSASLVCKIADFGLARVI-EDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G ++ V A R Y RP PE + ++ CW
Sbjct: 369 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC---PEELYNIMMRCWKNR 425
Query: 336 PDRRPTFEEI 345
P+ RPTFE I
Sbjct: 426 PEERPTFEYI 435
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + EY G+L + L+ + P + Y+ DI
Sbjct: 104 IHLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 159
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K
Sbjct: 160 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK-K 215
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 276 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 122/284 (42%), Gaps = 46/284 (16%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIA----SNPRVRNSFMKELGLWQKLRH 148
GA+G+V + + G + +A K ++ S+ MK +G +H
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG-----KH 100
Query: 149 PNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI---------- 198
NI+ LG L + EY G+L + L+ + P + Y+ DI
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTF 156
Query: 199 ----------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSY 248
ARGM YL + IHRDL NVL E +K+ DFGL++ D Y
Sbjct: 157 KDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 249 SYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRA 308
K T G ++MAPE Y DV+SF +++ E+F G S V+ +
Sbjct: 214 K-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 309 YEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
E R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 132/284 (46%), Gaps = 34/284 (11%)
Query: 99 IDPGAYGEVY--LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQFL 155
I G +G+V +K G + A R ++ F EL + KL HPNI+ L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKL--DPPTAVA--------------YALDIA 199
G +H L EY +G+L D L+K L DP A+A +A D+A
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY 259
RGM+YL + IHRDL N+L E K+ DFGLS+ QE K T G
Sbjct: 143 RGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR-GQE---VYVKKTMGRLPV 195
Query: 260 RYMAPEVYRRESYGKSVDVFSFALIVHEMFQ-GGPSNRADTAVQVADR--RAYEDSRPAL 316
R+MA E Y + DV+S+ +++ E+ GG T ++ ++ + Y +P
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 255
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKT 360
+ + L+R+CW + P RP+F +I+ L + E ++KT
Sbjct: 256 CD---DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE--ERKT 294
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + EY G+L + L+ + P + Y+ DI
Sbjct: 104 ITLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 159
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K
Sbjct: 160 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK-K 215
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 276 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 132/284 (46%), Gaps = 34/284 (11%)
Query: 99 IDPGAYGEVY--LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQFL 155
I G +G+V +K G + A R ++ F EL + KL HPNI+ L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKL--DPPTAVA--------------YALDIA 199
G +H L EY +G+L D L+K L DP A+A +A D+A
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY 259
RGM+YL + IHRDL N+L E K+ DFGLS+ QE K T G
Sbjct: 153 RGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR-GQE---VYVKKTMGRLPV 205
Query: 260 RYMAPEVYRRESYGKSVDVFSFALIVHEMFQ-GGPSNRADTAVQVADR--RAYEDSRPAL 316
R+MA E Y + DV+S+ +++ E+ GG T ++ ++ + Y +P
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 265
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKT 360
+ + L+R+CW + P RP+F +I+ L + E ++KT
Sbjct: 266 CD---DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE--ERKT 304
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 75
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 76 LIGVITENPVWIIM-ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--- 131
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 242
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 75
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 76 LIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--- 131
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 242
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 77
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 78 LIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--- 133
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 192 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 244
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 245 SLMTKCWAYDPSRRPRFTELKAQLSTILE 273
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 78
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 79 LIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--- 134
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 193 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 245
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 246 SLMTKCWAYDPSRRPRFTELKAQLSTILE 274
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 75
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 76 LIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--- 131
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 242
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 80
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 81 LIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--- 136
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 247
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 248 SLMTKCWAYDPSRRPRFTELKAQLSTILE 276
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 72
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 73 LIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--- 128
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 239
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQLSTILE 268
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 19/227 (8%)
Query: 136 FMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAY 194
F +E+ + L HPNIV+ G++ + R++ E++ G L H +L K + +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 195 ALDIARGMNYLHHHRPHAIIHRDL-TPSNVLQ--DEAGHL--KVTDFGLSKIAQEKDSYS 249
LDIA G+ Y+ + P I+HRDL +P+ LQ DE + KV DFGLS+ +
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS------V 180
Query: 250 YKMTGGTGSYRYMAPEVY--RRESYGKSVDVFSFALIVHEMFQG-GPSNRADTA-VQVAD 305
+ ++G G++++MAPE ESY + D +SFA+I++ + G GP + ++ +
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 306 RRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
E RP + P ++ ++ CW +P +RP F I+ L +
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
G +G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 38 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 95
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + EY G+L + L+ + P + Y+ DI
Sbjct: 96 INLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 151
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K
Sbjct: 152 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK-K 207
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 267
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 268 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + EY G+L + L+ + P + Y+ DI
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 159
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDL NVL E +++ DFGL++ D Y K
Sbjct: 160 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK-K 215
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 276 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 103
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 104 LIGVITENPVWIIM-ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--- 159
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 218 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 270
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 271 SLMTKCWAYDPSRRPRFTELKAQLSTILE 299
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
G +G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 35 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 92
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + EY G+L + L+ + P + Y+ DI
Sbjct: 93 INLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 148
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K
Sbjct: 149 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK-K 204
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 264
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 265 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 102 GAYGEVYLVKW-----RGTEIAAKTIRSS-IASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G YG+V+ V+ G A K ++ + I N + E + ++++HP IV +
Sbjct: 28 GGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLI 87
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ +L + EYL G L L+++G TA Y +I+ + +LH II+
Sbjct: 88 YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIY 144
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL P N++ + GH+K+TDFGL K + + ++ G+ YMAPE+ R + ++
Sbjct: 145 RDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF---CGTIEYMAPEILMRSGHNRA 201
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADR 306
VD +S ++++M G P + + D+
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDK 232
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 102 GAYGEVYLVKW-----RGTEIAAKTIRSS-IASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G YG+V+ V+ G A K ++ + I N + E + ++++HP IV +
Sbjct: 28 GGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLI 87
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ +L + EYL G L L+++G TA Y +I+ + +LH II+
Sbjct: 88 YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIY 144
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL P N++ + GH+K+TDFGL K + + ++ G+ YMAPE+ R + ++
Sbjct: 145 RDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF---CGTIEYMAPEILMRSGHNRA 201
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADR 306
VD +S ++++M G P + + D+
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDK 232
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 455
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 456 LIGVITENPVWIIM-ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--- 511
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 622
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 623 SLMTKCWAYDPSRRPRFTELKAQLSTILE 651
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 37/278 (13%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V L ++ G +A K ++ S P + F +E+ + + L IV++
Sbjct: 34 GNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 156 GVL----KHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRP 210
GV + S RL+ EYL +G L D L++ + +LD + Y+ I +GM YL R
Sbjct: 91 GVSYGPGRQSLRLVM--EYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR- 147
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQ-EKDSYSYKMTGGTGSYRYMAPEVYRR 269
+HRDL N+L + H+K+ DFGL+K+ +KD Y + G + + Y APE
Sbjct: 148 --CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSD 204
Query: 270 ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLY--------- 320
+ + DV+SF ++++E+F + + +A + E PALS L
Sbjct: 205 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSA-EFLRMMGCERDVPALSRLLELLEEGQRL 263
Query: 321 ------PEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
P + L++ CW +P RP+F + +L+ +
Sbjct: 264 PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + EY G+L + L+ + P + Y+ DI
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 159
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDL NVL E +K+ DFGL++ D Y
Sbjct: 160 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK-N 215
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 276 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 44/269 (16%)
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A K ++ + ++P + E + +++ HP++++ G L+ + EY + G
Sbjct: 54 TTVAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 175 SLHDILKKKGKLDPP------------------------TAVAYALDIARGMNYLHHHRP 210
SL L++ K+ P +++A I++GM YL +
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK- 170
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRE 270
++HRDL N+L E +K++DFGLS+ E+DSY K + G ++MA E
Sbjct: 171 --LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY-VKRSQGRIPVKWMAIESLFDH 227
Query: 271 SYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
Y DV+SF +++ E+ + G P R ++ R RP S E
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM----ERPDNCS---EE 280
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLEAI 352
+ L+ +CW + PD+RP F +I LE +
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 455
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 456 LIGVITENPVWIIM-ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--- 511
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS YK + G ++MAPE +
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 622
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 623 SLMTKCWAYDPSRRPRFTELKAQLSTILE 651
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 105/237 (44%), Gaps = 33/237 (13%)
Query: 136 FMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYA 195
MK +G +H NI+ LG L + EY G+L + L+ + P + Y+
Sbjct: 139 MMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYS 189
Query: 196 LDI--------------------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTD 235
DI ARGM YL + IHRDL NVL E +K+ D
Sbjct: 190 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIAD 246
Query: 236 FGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSN 295
FGL++ D Y K T G ++MAPE Y DV+SF +++ E+F G S
Sbjct: 247 FGLARDINNIDYYK-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 296 RADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
V+ + E R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 306 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 132/284 (46%), Gaps = 34/284 (11%)
Query: 99 IDPGAYGEVY--LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQFL 155
I G +G+V +K G + A R ++ F EL + KL HPNI+ L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKL--DPPTAVA--------------YALDIA 199
G +H L EY +G+L D L+K L DP A+A +A D+A
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY 259
RGM+YL + IHR+L N+L E K+ DFGLS+ QE K T G
Sbjct: 150 RGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR-GQE---VYVKKTMGRLPV 202
Query: 260 RYMAPEVYRRESYGKSVDVFSFALIVHEMFQ-GGPSNRADTAVQVADR--RAYEDSRPAL 316
R+MA E Y + DV+S+ +++ E+ GG T ++ ++ + Y +P
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 262
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKT 360
+ + L+R+CW + P RP+F +I+ L + E ++KT
Sbjct: 263 CD---DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE--ERKT 301
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 99 IDPGAYGEVYL-VKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G++GEVY + E+ A I + +E+ + + P I ++ G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
S +L + EYL GS D+LK G L+ +I +G++YLH R IHRD
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERK---IHRD 141
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
+ +NVL E G +K+ DFG +A + K G+ +MAPEV ++ +Y D
Sbjct: 142 IKAANVLLSEQGDVKLADFG---VAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKAD 198
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
++S + E+ +G P N ++V ++S P L + +P K + C +K+P
Sbjct: 199 IWSLGITAIELAKGEPPNSDLHPMRVL-FLIPKNSPPTLEGQHSKPFKEFVEACLNKDPR 257
Query: 338 RRPTFEEII 346
RPT +E++
Sbjct: 258 FRPTAKELL 266
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + Y G+L + L+ + P + Y+ DI
Sbjct: 104 INLLGACTQDGPLYVIVAYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 159
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K
Sbjct: 160 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK-K 215
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 276 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 37/278 (13%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V L ++ G +A K ++ S P + F +E+ + + L IV++
Sbjct: 21 GNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 156 GVL----KHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRP 210
GV + S RL+ EYL +G L D L++ + +LD + Y+ I +GM YL R
Sbjct: 78 GVSYGPGRQSLRLVM--EYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR- 134
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQ-EKDSYSYKMTGGTGSYRYMAPEVYRR 269
+HRDL N+L + H+K+ DFGL+K+ +KD Y + G + + Y APE
Sbjct: 135 --CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSD 191
Query: 270 ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLY--------- 320
+ + DV+SF ++++E+F + + +A + E PALS L
Sbjct: 192 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSA-EFLRMMGSERDVPALSRLLELLEEGQRL 250
Query: 321 ------PEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
P + L++ CW +P RP+F + +L+ +
Sbjct: 251 PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 288
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + EY G+L + L+ + P + Y+ DI
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 159
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDL NVL E +K+ DFGL++ D K
Sbjct: 160 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK-K 215
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 276 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 84 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 139
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 196
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 249
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 285
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 20 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 77
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 78 GICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 133
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 134 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 190
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 191 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 243
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 244 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 279
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI------------- 198
+ LG L + Y G+L + L+ + P + Y+ DI
Sbjct: 104 INLLGACTQDGPLYVIVGYASKGNLREYLRARR----PPGMEYSYDINRVPEEQMTFKDL 159
Query: 199 -------ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
ARGM YL + IHRDL NVL E +K+ DFGL++ D Y K
Sbjct: 160 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK-K 215
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 276 HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 84 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 139
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 196
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 249
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 285
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 86 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 141
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 198
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 251
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 252 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 287
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 86 GICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 141
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFG +K+ A+EK+ Y GG ++MA E Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 198
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 251
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++R+CW + D RP F E+I + Q+ V
Sbjct: 252 MIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 287
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 91 GICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 146
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 203
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 256
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 257 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 292
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 91 GICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 146
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 203
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 256
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 257 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 292
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 32 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 89
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 90 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 145
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 146 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 202
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 203 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 255
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 256 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 291
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 51 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 108
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 109 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 164
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 165 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 221
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 222 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 274
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 275 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 310
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G+V L ++ G ++A K+++ N KE+ + + L H NIV++
Sbjct: 20 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNLYHENIVKYK 77
Query: 156 GVLKHS--ERLIFLTEYLRNGSLHDIL-KKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
G+ + + E+L +GSL + L K K K++ + YA+ I +GM+YL +
Sbjct: 78 GICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--- 134
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL + +K+ DFGL+K I +K+ + K + + Y APE +
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSK 193
Query: 272 YGKSVDVFSFALIVHEMFQG---------------GPSNRADTAVQVADRRAYEDSRPAL 316
+ + DV+SF + +HE+ GP++ T ++ + E R
Sbjct: 194 FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK-EGKRLPC 252
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
P+ + L+R+CW P R +F+ +I EA+
Sbjct: 253 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 87 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 142
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 199
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 252
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 253 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 288
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 87 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 142
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 199
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 252
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 253 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 288
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G+V L ++ G ++A K+++ N KE+ + + L H NIV++
Sbjct: 32 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNLYHENIVKYK 89
Query: 156 GVLKHS--ERLIFLTEYLRNGSLHDIL-KKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
G+ + + E+L +GSL + L K K K++ + YA+ I +GM+YL +
Sbjct: 90 GICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--- 146
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL + +K+ DFGL+K I +K+ + K + + Y APE +
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSK 205
Query: 272 YGKSVDVFSFALIVHEMFQG---------------GPSNRADTAVQVADRRAYEDSRPAL 316
+ + DV+SF + +HE+ GP++ T ++ + E R
Sbjct: 206 FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK-EGKRLPC 264
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
P+ + L+R+CW P R +F+ +I EA+
Sbjct: 265 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 28/274 (10%)
Query: 102 GAYGEVYLVKW----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
GA+G VY W +I + A++P+ + E + + +P++ + LG+
Sbjct: 60 GAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 119
Query: 158 LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
S + +T+ + G L D +++ K + + + + IA+GMNYL R ++HR
Sbjct: 120 CLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHR 175
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGK 274
DL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 176 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIYTH 232
Query: 275 SVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKAL 327
DV+S+ + V E+ + G P++ + ++ +R +P + ++ + +
Sbjct: 233 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVYMI 285
Query: 328 LRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
+ +CW + D RP F E+I + Q+ V
Sbjct: 286 MVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 319
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 84 GICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 139
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 196
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 249
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 285
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 91 KILEDRGGIDPGAYGEVYLVKW-----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
++LE G G++G V +W + +A K ++ + S P + F++E+
Sbjct: 11 RLLEKLGD---GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNY 204
L H N+++ GV+ + + +TE GSL D L+K +G T YA+ +A GM Y
Sbjct: 68 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
L R IHRDL N+L +K+ DFGL + + D + + + AP
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 265 EVYRRESYGKSVDVFSFALIVHEMFQGGPSNRAD-TAVQVADRRAYEDSRPALSSLYPEP 323
E + ++ + D + F + + EMF G Q+ + E R P+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 324 IKALLRECWHKNPDRRPTFEEI-IFRLEA 351
I ++ +CW P+ RPTF + F LEA
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 99 IDPGAYGEVYLVKWRGTE-----IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
I G +G+V+ + E +A KT ++ + + VR F++E ++ HP+IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFLQEALTMRQFDHPHIVK 75
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+GV+ + I + E G L L+ +K LD + + YA ++ + YL R
Sbjct: 76 LIGVITENPVWIIM-ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--- 131
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
+HRD+ NVL +K+ DFGLS+ + DS K + G ++MAPE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
+ DV+ F + + E+ FQG +N ++ +R + P +LY
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP--TLY----- 242
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQE 354
+L+ +CW +P RRP F E+ +L I E
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 91 KILEDRGGIDPGAYGEVYLVKW-----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
++LE G G++G V +W + +A K ++ + S P + F++E+
Sbjct: 21 RLLEKLGD---GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNY 204
L H N+++ GV+ + + +TE GSL D L+K +G T YA+ +A GM Y
Sbjct: 78 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
L R IHRDL N+L +K+ DFGL + + D + + + AP
Sbjct: 137 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 265 EVYRRESYGKSVDVFSFALIVHEMFQGGPSNRAD-TAVQVADRRAYEDSRPALSSLYPEP 323
E + ++ + D + F + + EMF G Q+ + E R P+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 253
Query: 324 IKALLRECWHKNPDRRPTFEEI-IFRLEA 351
I ++ +CW P+ RPTF + F LEA
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFLLEA 282
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 136 FMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAY 194
F +E+ + L HPNIV+ G++ + R++ E++ G L H +L K + +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 195 ALDIARGMNYLHHHRPHAIIHRDL-TPSNVLQ--DEAGHL--KVTDFGLSKIAQEKDSYS 249
LDIA G+ Y+ + P I+HRDL +P+ LQ DE + KV DFG S+ +
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS------V 180
Query: 250 YKMTGGTGSYRYMAPEVY--RRESYGKSVDVFSFALIVHEMFQG-GPSNRADTA-VQVAD 305
+ ++G G++++MAPE ESY + D +SFA+I++ + G GP + ++ +
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 306 RRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
E RP + P ++ ++ CW +P +RP F I+ L +
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 120/267 (44%), Gaps = 33/267 (12%)
Query: 101 PGAYGEVYLVKWRG--TEIAAKTIRSSIASNPRVRNS----------FMKELGLWQKLRH 148
GAYGEV L K + +E A K I+ S R + E+ L + L H
Sbjct: 46 SGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH 105
Query: 149 PNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHH 208
PNI++ V + + +TE+ G L + + + K D A I G+ YLH
Sbjct: 106 PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH-- 163
Query: 209 RPHAIIHRDLTPSNVLQDEAGHL---KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPE 265
H I+HRD+ P N+L + L K+ DFGLS S YK+ G+ Y+APE
Sbjct: 164 -KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF----SKDYKLRDRLGTAYYIAPE 218
Query: 266 VYRRESYGKSVDVFSFALIVHEMFQGGP----SNRADTAVQVADRRAYEDSR--PALSSL 319
V +++ Y + DV+S +I++ + G P N D +V + Y D +S
Sbjct: 219 VLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDE 277
Query: 320 YPEPIKALLRECWHKNPDRRPTFEEII 346
E IK +L ++K R T EE +
Sbjct: 278 AKELIKLMLTYDYNK----RCTAEEAL 300
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 9/193 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIA-SNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
G++G+V L + +GT+ A K ++ + + V + +++ L + P + Q
Sbjct: 31 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 90
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ +RL F+ EY+ G L +++ G+ P AV YA +IA G+ +L + II+RDL
Sbjct: 91 QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDL 147
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
NV+ D GH+K+ DFG+ K D + K GT Y+APE+ + YGKSVD
Sbjct: 148 KLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPD--YIAPEIIAYQPYGKSVDW 204
Query: 279 FSFALIVHEMFQG 291
++F ++++EM G
Sbjct: 205 WAFGVLLYEMLAG 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 23 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 80
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA GMNYL R ++
Sbjct: 81 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR---LV 136
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E Y
Sbjct: 137 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 193
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 246
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 247 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 282
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 14/197 (7%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV K R T E A K I + A N ++ ++E+ L +KL HPNI++ +L+
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLFEILE 91
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
S + E G L D + K+ + A + G+ Y+H H I+HRDL
Sbjct: 92 DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLK 148
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L +++ +K+ DFGLS Q+ + KM G+ Y+APEV R +Y +
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQ----NTKMKDRIGTAYYIAPEVLRG-TYDEKC 203
Query: 277 DVFSFALIVHEMFQGGP 293
DV+S +I++ + G P
Sbjct: 204 DVWSAGVILYILLSGTP 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 9/211 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEI--AAKTIRSSIASNPRVRNSFMKELG-LWQKLRHPNIVQFL 155
I G++G+V L + + E+ A K ++ + M E L + ++HP +V
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ +++L F+ +Y+ G L L+++ P A YA +IA + YLH I++
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN---IVY 162
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL P N+L D GH+ +TDFGL K E +S + + G+ Y+APEV ++ Y ++
Sbjct: 163 RDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT---STFCGTPEYLAPEVLHKQPYDRT 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADR 306
VD + +++EM G P + ++ D
Sbjct: 220 VDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN 250
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 9/193 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIA-SNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
G++G+V L + +GT+ A K ++ + + V + +++ L + P + Q
Sbjct: 352 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 411
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ +RL F+ EY+ G L +++ G+ P AV YA +IA G+ +L + II+RDL
Sbjct: 412 QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDL 468
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
NV+ D GH+K+ DFG+ K D + K GT Y+APE+ + YGKSVD
Sbjct: 469 KLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPD--YIAPEIIAYQPYGKSVDW 525
Query: 279 FSFALIVHEMFQG 291
++F ++++EM G
Sbjct: 526 WAFGVLLYEMLAG 538
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 91 KILEDRGGIDPGAYGEVYLVKW-----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
++LE G G++G V +W + +A K ++ + S P + F++E+
Sbjct: 11 RLLEKLGD---GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNY 204
L H N+++ GV+ + + +TE GSL D L+K +G T YA+ +A GM Y
Sbjct: 68 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
L R IHRDL N+L +K+ DFGL + + D + + + AP
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 265 EVYRRESYGKSVDVFSFALIVHEMFQGGPSNRAD-TAVQVADRRAYEDSRPALSSLYPEP 323
E + ++ + D + F + + EMF G Q+ + E R P+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 324 IKALLRECWHKNPDRRPTFEEI-IFRLEA 351
I ++ +CW P+ RPTF + F LEA
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 91 KILEDRGGIDPGAYGEVYLVKW-----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
++LE G G++G V +W + +A K ++ + S P + F++E+
Sbjct: 15 RLLEKLGD---GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNY 204
L H N+++ GV+ + + +TE GSL D L+K +G T YA+ +A GM Y
Sbjct: 72 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
L R IHRDL N+L +K+ DFGL + + D + + + AP
Sbjct: 131 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 265 EVYRRESYGKSVDVFSFALIVHEMFQGGPSNRAD-TAVQVADRRAYEDSRPALSSLYPEP 323
E + ++ + D + F + + EMF G Q+ + E R P+
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 247
Query: 324 IKALLRECWHKNPDRRPTFEEI-IFRLEA 351
I ++ +CW P+ RPTF + F LEA
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFLLEA 276
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 136 FMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSL-HDILKKKGKLDPPTAVAY 194
F +E+ + L HPNIV+ G++ + R++ E++ G L H +L K + +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 195 ALDIARGMNYLHHHRPHAIIHRDL-TPSNVLQ--DEAGHL--KVTDFGLSKIAQEKDSYS 249
LDIA G+ Y+ + P I+HRDL +P+ LQ DE + KV DF LS+ +
Sbjct: 128 MLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS------V 180
Query: 250 YKMTGGTGSYRYMAPEVY--RRESYGKSVDVFSFALIVHEMFQG-GPSNRADTA-VQVAD 305
+ ++G G++++MAPE ESY + D +SFA+I++ + G GP + ++ +
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 306 RRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
E RP + P ++ ++ CW +P +RP F I+ L +
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 29/250 (11%)
Query: 102 GAYGEVYLVKW-RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +GEV++ + + T++A KT++ S +F+ E + + L+H +V+ V+
Sbjct: 193 GQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAVVT- 247
Query: 161 SERLIFLTEYLRNGSLHDILKK-KGKLDP-PTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
E + +TE++ GSL D LK +G P P + ++ IA GM ++ IHRDL
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 304
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
+N+L + K+ DFGL+++ G ++ APE S+ DV
Sbjct: 305 RAANILVSASLVCKIADFGLARV------------GAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 279 FSFALIVHEMFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+SF +++ E+ G ++ V A R Y RP PE + ++ CW
Sbjct: 353 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC---PEELYNIMMRCWKNR 409
Query: 336 PDRRPTFEEI 345
P+ RPTFE I
Sbjct: 410 PEERPTFEYI 419
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 91 KILEDRGGIDPGAYGEVYLVKW-----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
++LE G G++G V +W + +A K ++ + S P + F++E+
Sbjct: 15 RLLEKLGD---GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNY 204
L H N+++ GV+ + + +TE GSL D L+K +G T YA+ +A GM Y
Sbjct: 72 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
L R IHRDL N+L +K+ DFGL + + D + + + AP
Sbjct: 131 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 265 EVYRRESYGKSVDVFSFALIVHEMFQGGPSNRAD-TAVQVADRRAYEDSRPALSSLYPEP 323
E + ++ + D + F + + EMF G Q+ + E R P+
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 247
Query: 324 IKALLRECWHKNPDRRPTFEEI-IFRLEA 351
I ++ +CW P+ RPTF + F LEA
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFLLEA 276
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 91 KILEDRGGIDPGAYGEVYLVKW-----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
++LE G G++G V +W + +A K ++ + S P + F++E+
Sbjct: 11 RLLEKLGD---GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNY 204
L H N+++ GV+ + + +TE GSL D L+K +G T YA+ +A GM Y
Sbjct: 68 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
L R IHRDL N+L +K+ DFGL + + D + + + AP
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 265 EVYRRESYGKSVDVFSFALIVHEMFQGGPSNRAD-TAVQVADRRAYEDSRPALSSLYPEP 323
E + ++ + D + F + + EMF G Q+ + E R P+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 324 IKALLRECWHKNPDRRPTFEEI-IFRLEA 351
I ++ +CW P+ RPTF + F LEA
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 132/278 (47%), Gaps = 37/278 (13%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V L ++ G +A K ++ S P + F +E+ + + L IV++
Sbjct: 22 GNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 156 GVL----KHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRP 210
GV + S RL+ EYL +G L D L++ + +LD + Y+ I +GM YL R
Sbjct: 79 GVSYGPGRQSLRLVM--EYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR- 135
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQ-EKDSYSYKMTGGTGSYRYMAPEVYRR 269
+HRDL N+L + H+K+ DFGL+K+ +KD Y + G + + Y APE
Sbjct: 136 --CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSD 192
Query: 270 ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLY--------- 320
+ + DV+SF ++++E+F + + +A + E PAL L
Sbjct: 193 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSA-EFLRMMGCERDVPALCRLLELLEEGQRL 251
Query: 321 ------PEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
P + L++ CW +P RP+F + +L+ +
Sbjct: 252 PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 289
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 91 KILEDRGGIDPGAYGEVYLVKW-----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
++LE G G++G V +W + +A K ++ + S P + F++E+
Sbjct: 21 RLLEKLGD---GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNY 204
L H N+++ GV+ + + +TE GSL D L+K +G T YA+ +A GM Y
Sbjct: 78 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
L R IHRDL N+L +K+ DFGL + + D + + + AP
Sbjct: 137 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 265 EVYRRESYGKSVDVFSFALIVHEMFQGGPSNRAD-TAVQVADRRAYEDSRPALSSLYPEP 323
E + ++ + D + F + + EMF G Q+ + E R P+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 253
Query: 324 IKALLRECWHKNPDRRPTFEEI-IFRLEA 351
I ++ +CW P+ RPTF + F LEA
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFLLEA 282
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSI-ASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G VY T +A K + + + + ++ F +E+ + K +H N+V+ LG
Sbjct: 42 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD 101
Query: 161 SERLIFLTEYLRNGSLHDILKKKGKLD--PPTA----VAYALDIARGMNYLH--HHRPHA 212
+ L + Y+ NGSL D L LD PP + A A G+N+LH HH
Sbjct: 102 GDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---- 154
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
IHRD+ +N+L DEA K++DFGL++ A EK + + + G+ YMAPE R E
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTVMXSRIVGTTAYMAPEALRGEIT 212
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQV------------------ADRRAYEDSRP 314
KS D++SF +++ E+ G P+ Q+ D++ +
Sbjct: 213 PKS-DIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST 271
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQES 355
++ ++Y ++ +C H+ ++RP +++ L+ + S
Sbjct: 272 SVEAMY-----SVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 102 GAYGEVYLVKWRGT-------EIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G ++A K ++S+ ++ + + M EL + L +H NIV
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHENIVN 114
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKKGKL---DPPTAVA-----------YALDIA 199
LG H ++ +TEY G L + L++K ++ DP A+A ++ +A
Sbjct: 115 LLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVA 174
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY 259
+GM +L IHRD+ NVL K+ DFGL++ +Y K
Sbjct: 175 QGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PV 230
Query: 260 RYMAPEVYRRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+S+ +++ E+F G P ++ + Y+ ++PA
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 290
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEII-FRLEAIQE 354
+ P+ I ++++ CW P RPTF++I F E QE
Sbjct: 291 FA---PKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 102 GAYGEVYLVKWRGT-------EIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G ++A K ++S+ ++ + + M EL + L +H NIV
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHENIVN 114
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKKGKL---DPPTAVA-----------YALDIA 199
LG H ++ +TEY G L + L++K ++ DP A+A ++ +A
Sbjct: 115 LLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVA 174
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY 259
+GM +L IHRD+ NVL K+ DFGL++ +Y K
Sbjct: 175 QGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PV 230
Query: 260 RYMAPEVYRRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPA 315
++MAPE Y DV+S+ +++ E+F G P ++ + Y+ ++PA
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 290
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEII-FRLEAIQE 354
+ P+ I ++++ CW P RPTF++I F E QE
Sbjct: 291 FA---PKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G EV+L + ++A K +R+ +A +P F +E L HP IV +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 160 HSERL----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ EY+ +L DI+ +G + P A+ D + +N+ H + IIH
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIH 139
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RD+ P+N+L +KV DFG+++ + + + G+ +Y++PE R +S
Sbjct: 140 RDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRP--ALSSLYPEPIKALLRECWH 333
DV+S +++E+ G P D+ V VA + ED P A + A++ +
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 334 KNPDRR 339
KNP+ R
Sbjct: 260 KNPENR 265
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 14/197 (7%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV K R T E A K I + A N ++ ++E+ L +KL HPNI++ +L+
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLFEILE 91
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
S + E G L D + K+ + A + G+ Y+H H I+HRDL
Sbjct: 92 DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLK 148
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L +++ +K+ DFGLS Q+ + KM G+ Y+APEV R +Y +
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQ----NTKMKDRIGTAYYIAPEVLRG-TYDEKC 203
Query: 277 DVFSFALIVHEMFQGGP 293
DV+S +I++ + G P
Sbjct: 204 DVWSAGVILYILLSGTP 220
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 14/197 (7%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV K R T E A K I + A N ++ ++E+ L +KL HPNI++ +L+
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLFEILE 91
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
S + E G L D + K+ + A + G+ Y+H H I+HRDL
Sbjct: 92 DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLK 148
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L +++ +K+ DFGLS Q+ + KM G+ Y+APEV R +Y +
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQ----NTKMKDRIGTAYYIAPEVLRG-TYDEKC 203
Query: 277 DVFSFALIVHEMFQGGP 293
DV+S +I++ + G P
Sbjct: 204 DVWSAGVILYILLSGTP 220
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 75 RTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRV 132
++ L+D G+ I K L + G++G+V L G ++A K I + + +
Sbjct: 4 KSSLADGAHIGNYQIVKTLGE------GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM 57
Query: 133 RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
+ +E+ + LRHP+I++ V+K + +I + EY N L D + ++ K+ A
Sbjct: 58 QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR 116
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM 252
+ I + Y H H+ I+HRDL P N+L DE ++K+ DFGLS I + + +
Sbjct: 117 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF----L 169
Query: 253 TGGTGSYRYMAPEVYRRESY-GKSVDVFSFALIVHEMF 289
GS Y APEV + Y G VDV+S +I++ M
Sbjct: 170 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 84 GICLTSTVQLIM--QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 138
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 195
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 248
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 249 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 285
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 85 GICLTSTVQLIM--QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 139
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 196
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 249
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 250 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 286
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 88 GICLTSTVQLIM--QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 142
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 199
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 252
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 253 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 289
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 75 RTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRV 132
++ L+D G+ I K L + G++G+V L G ++A K I + + +
Sbjct: 3 KSSLADGAHIGNYQIVKTLGE------GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM 56
Query: 133 RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
+ +E+ + LRHP+I++ V+K + +I + EY N L D + ++ K+ A
Sbjct: 57 QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR 115
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM 252
+ I + Y H H+ I+HRDL P N+L DE ++K+ DFGLS I + + +
Sbjct: 116 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF----L 168
Query: 253 TGGTGSYRYMAPEVYRRESY-GKSVDVFSFALIVHEMF 289
GS Y APEV + Y G VDV+S +I++ M
Sbjct: 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSI-ASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G VY T +A K + + + + ++ F +E+ + K +H N+V+ LG
Sbjct: 42 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD 101
Query: 161 SERLIFLTEYLRNGSLHDILKKKGKLD--PPTA----VAYALDIARGMNYLH--HHRPHA 212
+ L + Y+ NGSL D L LD PP + A A G+N+LH HH
Sbjct: 102 GDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---- 154
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
IHRD+ +N+L DEA K++DFGL++ A EK + + G+ YMAPE R E
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTVMXXRIVGTTAYMAPEALRGEIT 212
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQV------------------ADRRAYEDSRP 314
KS D++SF +++ E+ G P+ Q+ D++ +
Sbjct: 213 PKS-DIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST 271
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQES 355
++ ++Y ++ +C H+ ++RP +++ L+ + S
Sbjct: 272 SVEAMY-----SVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 24/256 (9%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIA-------SNPRVRNSFMKELGLWQKLRHPNIVQF 154
GA+G VY W +T++ +A + P+ FM E + + HP++V+
Sbjct: 49 GAFGTVYKGIWVP---EGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 155 LGVLKHSERLIFLTEYLRNGSLHD-ILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
LGV S + +T+ + +G L + + + K + + + + IA+GM YL R +
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---L 161
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYG 273
+HRDL NVL H+K+TDFGL+++ E D Y GG ++MA E +
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALECIHYRKFT 220
Query: 274 KSVDVFSFALIVHEM--FQGGPSNRADTAVQVAD--RRAYEDSRPALSSLYPEPIKALLR 329
DV+S+ + + E+ F G P + T ++ D + +P + ++ + ++
Sbjct: 221 HQSDVWSYGVTIWELMTFGGKPYDGIPTR-EIPDLLEKGERLPQPPICTI---DVYMVMV 276
Query: 330 ECWHKNPDRRPTFEEI 345
+CW + D RP F+E+
Sbjct: 277 KCWMIDADSRPKFKEL 292
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 86 GICLTSTVQLIM--QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 140
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 197
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 250
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 251 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 287
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 38/280 (13%)
Query: 102 GAYGEVYLVKWRGTE---------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNI 151
GA+G+V + + G + +A K ++ + + + + E+ + + + +H NI
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPP-------------------TAV 192
+ LG L + EY G+L + L+ + PP V
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGMEXSYDINRVPEEQMTFKDLV 160
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM 252
+ +ARGM YL + IHRDL NVL E +K+ DFGL++ D K
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK-KT 216
Query: 253 TGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDS 312
T G ++MAPE Y DV+SF +++ E+F G S V+ + E
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 276
Query: 313 RPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
R + + ++R+CWH P +RPTF++++ L+ I
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 22/254 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMK-ELGLWQKLRHPNIVQFLGVL 158
GA+ EV+LVK R G A K I+ S P R+S ++ E+ + +K++H NIV +
Sbjct: 20 GAFSEVFLVKQRLTGKLFALKCIKKS----PAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ + + + + G L D + ++G A + + YLH + I+HRDL
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDL 132
Query: 219 TPSNVLQ---DEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
P N+L +E + +TDFGLSK+ Q M+ G+ Y+APEV ++ Y K+
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSKMEQNG-----IMSTACGTPGYVAPEVLAQKPYSKA 187
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRA---YEDSRPALSSLYPEPIKALLRECW 332
VD +S +I + + G P +T ++ ++ YE P + E K +
Sbjct: 188 VDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI-SESAKDFICHLL 246
Query: 333 HKNPDRRPTFEEII 346
K+P+ R T E+ +
Sbjct: 247 EKDPNERYTCEKAL 260
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 39 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 98
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 99 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 155
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L DE G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 156 PENLLIDEQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 205
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 206 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 263
Query: 336 PDRR 339
+R
Sbjct: 264 LTKR 267
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 87 GICLTSTVQLIM--QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 141
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 198
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 251
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 252 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 288
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 86 GICLTSTVQLIM--QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 140
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFG +K+ A+EK+ Y GG ++MA E
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 197
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 250
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++R+CW + D RP F E+I + Q+ V
Sbjct: 251 YMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 287
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 44/269 (16%)
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A K ++ + ++P + E + +++ HP++++ G L+ + EY + G
Sbjct: 54 TTVAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 175 SLHDILKKKGKLDPP------------------------TAVAYALDIARGMNYLHHHRP 210
SL L++ K+ P +++A I++GM YL +
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK- 170
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRE 270
++HRDL N+L E +K++DFGLS+ E+DS K + G ++MA E
Sbjct: 171 --LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-XVKRSQGRIPVKWMAIESLFDH 227
Query: 271 SYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
Y DV+SF +++ E+ + G P R ++ R RP S E
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM----ERPDNCS---EE 280
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLEAI 352
+ L+ +CW + PD+RP F +I LE +
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G EV+L + ++A K +R+ +A +P F +E L HP IV +
Sbjct: 23 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGE 82
Query: 160 HSERL----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ EY+ +L DI+ +G + P A+ D + +N+ H + IIH
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIH 139
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RD+ P+N++ +KV DFG+++ + + + G+ +Y++PE R +S
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRP--ALSSLYPEPIKALLRECWH 333
DV+S +++E+ G P D+ V VA + ED P A + A++ +
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 334 KNPDRR 339
KNP+ R
Sbjct: 260 KNPENR 265
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 189
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 190 PENLLIDQQGYIQVTDFGFAK----------RVKGATWTLCGTPEYLAPEIILSKGYNKA 239
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 297
Query: 336 PDRR 339
+R
Sbjct: 298 LTKR 301
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 91 GICLTSTVQLIM--QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 145
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 202
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 255
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 256 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 292
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 85 GICLTSTVQLIM--QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 139
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFGL+K+ A+EK+ Y GG ++MA E
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 196
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 249
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 250 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 286
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 24/256 (9%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIA-------SNPRVRNSFMKELGLWQKLRHPNIVQF 154
GA+G VY W +T++ +A + P+ FM E + + HP++V+
Sbjct: 26 GAFGTVYKGIWVP---EGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 155 LGVLKHSERLIFLTEYLRNGSLHD-ILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
LGV S + +T+ + +G L + + + K + + + + IA+GM YL R +
Sbjct: 83 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---L 138
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYG 273
+HRDL NVL H+K+TDFGL+++ E D Y GG ++MA E +
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALECIHYRKFT 197
Query: 274 KSVDVFSFALIVHEM--FQGGPSNRADTAVQVAD--RRAYEDSRPALSSLYPEPIKALLR 329
DV+S+ + + E+ F G P + T ++ D + +P + ++ + ++
Sbjct: 198 HQSDVWSYGVTIWELMTFGGKPYDGIPTR-EIPDLLEKGERLPQPPICTI---DVYMVMV 253
Query: 330 ECWHKNPDRRPTFEEI 345
+CW + D RP F+E+
Sbjct: 254 KCWMIDADSRPKFKEL 269
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 44/269 (16%)
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A K ++ + ++P + E + +++ HP++++ G L+ + EY + G
Sbjct: 54 TTVAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 175 SLHDILKKKGKLDPP------------------------TAVAYALDIARGMNYLHHHRP 210
SL L++ K+ P +++A I++GM YL
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-- 169
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRE 270
+++HRDL N+L E +K++DFGLS+ E+DS K + G ++MA E
Sbjct: 170 -SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-XVKRSQGRIPVKWMAIESLFDH 227
Query: 271 SYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
Y DV+SF +++ E+ + G P R ++ R RP S E
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM----ERPDNCS---EE 280
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLEAI 352
+ L+ +CW + PD+RP F +I LE +
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G EV+L + ++A K +R+ +A +P F +E L HP IV +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 160 HSERL----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ EY+ +L DI+ +G + P A+ D + +N+ H + IIH
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIH 139
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RD+ P+N++ +KV DFG+++ + + + G+ +Y++PE R +S
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRP--ALSSLYPEPIKALLRECWH 333
DV+S +++E+ G P D+ V VA + ED P A + A++ +
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 334 KNPDRR 339
KNP+ R
Sbjct: 260 KNPENR 265
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + R ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K + D Y ++A ++Y H R +IHRD+
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR---VIHRDIK 139
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L G LK+ DFG S A S + T G+ Y+ PE+ + + VD++
Sbjct: 140 PENLLLGSNGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A T + R + E + P + E + L+ N +
Sbjct: 195 SLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT---EGARDLISRLLKHNASQ 251
Query: 339 RPTFEEII 346
R T E++
Sbjct: 252 RLTLAEVL 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 99 IDPGAYGEVYL-VKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G++GEV+ + R ++ A I + +E+ + + P + ++ G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L + EYL GS D+L+ G LD +I +G++YLH + IHRD
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK---IHRD 149
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
+ +NVL E G +K+ DFG +A + K G+ +MAPEV ++ +Y D
Sbjct: 150 IKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 206
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
++S + E+ +G P + ++V +++ P L Y +P+K + C +K P
Sbjct: 207 IWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 265
Query: 338 RRPTFEEII 346
RPT +E++
Sbjct: 266 FRPTAKELL 274
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIA-SNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
G++G+V+L +++ T A K ++ + + V + +++ L HP +
Sbjct: 28 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 87
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ E L F+ EYL G L ++ K D A YA +I G+ +LH I++RDL
Sbjct: 88 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDL 144
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
N+L D+ GH+K+ DFG+ K D+ K G+ Y+APE+ + Y SVD
Sbjct: 145 KLDNILLDKDGHIKIADFGMCKENMLGDA---KTNXFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 279 FSFALIVHEMFQG 291
+SF ++++EM G
Sbjct: 202 WSFGVLLYEMLIG 214
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 132/281 (46%), Gaps = 42/281 (14%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSI-ASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G VY T +A K + + + + ++ F +E+ + K +H N+V+ LG
Sbjct: 36 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD 95
Query: 161 SERLIFLTEYLRNGSLHDILKKKGKLD--PPTA----VAYALDIARGMNYLH--HHRPHA 212
+ L + Y+ NGSL D L LD PP + A A G+N+LH HH
Sbjct: 96 GDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---- 148
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
IHRD+ +N+L DEA K++DFGL++ A EK + G+ YMAPE R E
Sbjct: 149 -IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVMXXRIVGTTAYMAPEALRGEIT 206
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQV------------------ADRRAYEDSRP 314
KS D++SF +++ E+ G P+ Q+ D++ +
Sbjct: 207 PKS-DIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST 265
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQES 355
++ ++Y ++ +C H+ ++RP +++ L+ + S
Sbjct: 266 SVEAMY-----SVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIA-SNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
G++G+V+L +++ T A K ++ + + V + +++ L HP +
Sbjct: 29 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 88
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ E L F+ EYL G L ++ K D A YA +I G+ +LH I++RDL
Sbjct: 89 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDL 145
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
N+L D+ GH+K+ DFG+ K D+ K G+ Y+APE+ + Y SVD
Sbjct: 146 KLDNILLDKDGHIKIADFGMCKENMLGDA---KTNEFCGTPDYIAPEILLGQKYNHSVDW 202
Query: 279 FSFALIVHEMFQG 291
+SF ++++EM G
Sbjct: 203 WSFGVLLYEMLIG 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G EV+L + ++A K +R+ +A +P F +E L HP IV +
Sbjct: 40 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 99
Query: 160 HSERL----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ EY+ +L DI+ +G + P A+ D + +N+ H + IIH
Sbjct: 100 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIH 156
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RD+ P+N++ +KV DFG+++ + + + G+ +Y++PE R +S
Sbjct: 157 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 216
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRP--ALSSLYPEPIKALLRECWH 333
DV+S +++E+ G P D+ V VA + ED P A + A++ +
Sbjct: 217 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 276
Query: 334 KNPDRR 339
KNP+ R
Sbjct: 277 KNPENR 282
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G EV+L + ++A K +R+ +A +P F +E L HP IV +
Sbjct: 23 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 160 HSERL----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ EY+ +L DI+ +G + P A+ D + +N+ H + IIH
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIH 139
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RD+ P+N++ +KV DFG+++ + + + G+ +Y++PE R +S
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRP--ALSSLYPEPIKALLRECWH 333
DV+S +++E+ G P D+ V VA + ED P A + A++ +
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 334 KNPDRR 339
KNP+ R
Sbjct: 260 KNPENR 265
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 15/251 (5%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V+ V K G +A K I I P +RN ++EL + + P IV F G
Sbjct: 36 GNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 93
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LKK G++ ++ + +G+ YL H I+HRD+
Sbjct: 94 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVK 151
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q DS + G+ YM+PE + Y D++
Sbjct: 152 PSNILVNSRGEIKLCDFGVS--GQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIW 206
Query: 280 SFALIVHEMFQG----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
S L + EM G G + + ++ D E S ++ + + +C KN
Sbjct: 207 SMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 266
Query: 336 PDRRPTFEEII 346
P R ++++
Sbjct: 267 PAERADLKQLM 277
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 99 IDPGAYGEVYL-VKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G++GEV+ + R ++ A I + +E+ + + P + ++ G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L + EYL GS D+L+ G LD +I +G++YLH + IHRD
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK---IHRD 144
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
+ +NVL E G +K+ DFG +A + K G+ +MAPEV ++ +Y D
Sbjct: 145 IKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 201
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
++S + E+ +G P + ++V +++ P L Y +P+K + C +K P
Sbjct: 202 IWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 260
Query: 338 RRPTFEEII 346
RPT +E++
Sbjct: 261 FRPTAKELL 269
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 91 GICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 146
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFG +K+ A+EK+ Y GG ++MA E Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 203
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 256
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 257 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 292
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 22/265 (8%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS----FMKELGLWQKL 146
KI++ GG G VYL + T + K +I PR + F +E+ +L
Sbjct: 14 KIVDKLGG---GGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
H NIV + V + + + EY+ +L + ++ G L TA+ + I G+ + H
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT-GSYRYMAPE 265
R I+HRD+ P N+L D LK+ DFG++K E S T G+ +Y +PE
Sbjct: 129 DMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET---SLTQTNHVLGTVQYFSPE 182
Query: 266 VYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI- 324
+ E+ + D++S ++++EM G P +TAV +A + +DS P +++ + I
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI-QDSVPNVTTDVRKDIP 241
Query: 325 ----KALLRECWHKNPDRRPTFEEI 345
+LR +R T +E+
Sbjct: 242 QSLSNVILRATEKDKANRYKTIQEM 266
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 17/215 (7%)
Query: 78 LSDARSFGHVVICKILEDRGGIDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNS 135
L+D G+ I K L + G++G+V L G ++A K I + + ++
Sbjct: 1 LADGAHIGNYQIVKTLGE------GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR 54
Query: 136 FMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYA 195
+E+ + LRHP+I++ V+K + +I + EY N L D + ++ K+ A +
Sbjct: 55 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFF 113
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
I + Y H H+ I+HRDL P N+L DE ++K+ DFGLS I + + +
Sbjct: 114 QQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF----LKTS 166
Query: 256 TGSYRYMAPEVYRRESY-GKSVDVFSFALIVHEMF 289
GS Y APEV + Y G VDV+S +I++ M
Sbjct: 167 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 99 IDPGAYGEVYL-VKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G++GEV+ + R ++ A I + +E+ + + P + ++ G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L + EYL GS D+L+ G LD +I +G++YLH + IHRD
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK---IHRD 129
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
+ +NVL E G +K+ DFG +A + K G+ +MAPEV ++ +Y D
Sbjct: 130 IKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
++S + E+ +G P + ++V +++ P L Y +P+K + C +K P
Sbjct: 187 IWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 245
Query: 338 RRPTFEEII 346
RPT +E++
Sbjct: 246 FRPTAKELL 254
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 99 IDPGAYGEVYL-VKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G++GEV+ + R ++ A I + +E+ + + P + ++ G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L + EYL GS D+L+ G LD +I +G++YLH + IHRD
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK---IHRD 129
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
+ +NVL E G +K+ DFG +A + K G+ +MAPEV ++ +Y D
Sbjct: 130 IKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
++S + E+ +G P + ++V +++ P L Y +P+K + C +K P
Sbjct: 187 IWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 245
Query: 338 RRPTFEEII 346
RPT +E++
Sbjct: 246 FRPTAKELL 254
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 49/283 (17%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK--LRHPNIVQFLG 156
+ G YGEV+ W+G +A K S R S+ +E L+ LRH NI+ F+
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSS------RDEKSWFRETELYNTVMLRHENILGFIA 98
Query: 157 ---VLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH------ 206
+HS +L +T Y GSL+D L+ LD + + L IA G+ +LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPE 265
+P AI HRDL N+L + G + D GL+ + +Q + G+ RYMAPE
Sbjct: 158 QGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 266 VYRR-------ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQ------VADRRAYEDS 312
V +SY K VD+++F L++ E+ + SN + V + ++ED
Sbjct: 217 VLDETIQVDCFDSY-KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 275
Query: 313 RPAL----------SSLYPEP----IKALLRECWHKNPDRRPT 341
R + + + +P + L++ECW++NP R T
Sbjct: 276 RKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 318
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 33/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G V L ++ G +A K ++ S P + F +E+ + + L IV++
Sbjct: 18 GNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 156 GVLKHSER--LIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
GV R L + EYL +G L D L++ + +LD + Y+ I +GM YL R
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--- 131
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQ-EKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL N+L + H+K+ DFGL+K+ +KD + G + + Y APE
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDNI 190
Query: 272 YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLY----------- 320
+ + DV+SF ++++E+F + + +A + E PAL L
Sbjct: 191 FSRQSDVWSFGVVLYELFTYCDKSCSPSA-EFLRMMGCERDVPALCRLLELLEEGQRLPA 249
Query: 321 ----PEPIKALLRECWHKNPDRRPTFEEIIFRLEAI 352
P + L++ CW +P RP+F + +L+ +
Sbjct: 250 PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 285
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 138/300 (46%), Gaps = 55/300 (18%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKT--IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G +G+V+ K R I KT IR +N + +E+ KL H NIV + G
Sbjct: 20 IGSGGFGQVFKAKHR---IDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIVHYNG 72
Query: 157 VL------------------------KHSER-----LIFLTEYLRNGSLHD-ILKKKG-K 185
K+S R L E+ G+L I K++G K
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 186 LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEK 245
LD A+ I +G++Y+H + +IHRDL PSN+ + +K+ DFGL + +
Sbjct: 133 LDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLV-TSLKN 188
Query: 246 DSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD 305
D K T G+ RYM+PE + YGK VD+++ LI+ E+ + DTA + +
Sbjct: 189 DG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-----HVCDTAFETS- 239
Query: 306 RRAYEDSRPA-LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTVPSC 364
+ + D R +S ++ + K LL++ K P+ RP EI+ L ++S +K +C
Sbjct: 240 -KFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHTC 298
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 156 GVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D +++ K + + + + IA+GMNYL R ++
Sbjct: 84 GICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LV 139
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
HRDL NVL H+K+TDFG +K+ A+EK+ Y GG ++MA E Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE---YHAEGGKVPIKWMALESILHRIY 196
Query: 273 GKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DVY 249
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 285
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 53 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 21/234 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLR 329
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLR 270
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 47 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 106
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 107 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 163
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 164 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 213
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 214 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 271
Query: 336 PDRR 339
+R
Sbjct: 272 LTKR 275
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLW-QKLRHPNIVQFLGVL 158
G+Y +V LV+ + T+ A K ++ + ++ + E ++ Q HP +V
Sbjct: 31 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 90
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ RL F+ EY+ G L ++++ KL A Y+ +I+ +NYLH II+RDL
Sbjct: 91 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDL 147
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
NVL D GH+K+TD+G+ K + G+ Y+APE+ R E YG SVD
Sbjct: 148 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYGFSVDW 204
Query: 279 FSFALIVHEMFQG 291
++ +++ EM G
Sbjct: 205 WALGVLMFEMMAG 217
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLXGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLAGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 49/283 (17%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK--LRHPNIVQFLG 156
+ G YGEV+ W+G +A K S R S+ +E L+ LRH NI+ F+
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSS------RDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 157 ---VLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH------ 206
+HS +L +T Y GSL+D L+ LD + + L IA G+ +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPE 265
+P AI HRDL N+L + G + D GL+ + +Q + G+ RYMAPE
Sbjct: 129 QGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 266 VYRR-------ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQ------VADRRAYEDS 312
V +SY K VD+++F L++ E+ + SN + V + ++ED
Sbjct: 188 VLDETIQVDCFDSY-KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 246
Query: 313 RPAL----------SSLYPEP----IKALLRECWHKNPDRRPT 341
R + + + +P + L++ECW++NP R T
Sbjct: 247 RKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLW-QKLRHPNIVQFLGVL 158
G+Y +V LV+ + T+ A K ++ + ++ + E ++ Q HP +V
Sbjct: 16 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 75
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ RL F+ EY+ G L ++++ KL A Y+ +I+ +NYLH II+RDL
Sbjct: 76 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDL 132
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
NVL D GH+K+TD+G+ K + + G+ Y+APE+ R E YG SVD
Sbjct: 133 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDW 189
Query: 279 FSFALIVHEMFQG 291
++ +++ EM G
Sbjct: 190 WALGVLMFEMMAG 202
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 49/283 (17%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK--LRHPNIVQFLG 156
+ G YGEV+ W+G +A K S R S+ +E L+ LRH NI+ F+
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSS------RDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 157 ---VLKHSE-RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH------ 206
+HS +L +T Y GSL+D L+ LD + + L IA G+ +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPE 265
+P AI HRDL N+L + G + D GL+ + +Q + G+ RYMAPE
Sbjct: 129 QGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 266 VYRR-------ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQ------VADRRAYEDS 312
V +SY K VD+++F L++ E+ + SN + V + ++ED
Sbjct: 188 VLDETIQVDCFDSY-KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 246
Query: 313 RPAL----------SSLYPEP----IKALLRECWHKNPDRRPT 341
R + + + +P + L++ECW++NP R T
Sbjct: 247 RKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 189
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 190 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 297
Query: 336 PDRR 339
+R
Sbjct: 298 LTKR 301
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 104
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 161
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 162 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 269
Query: 336 PDRR 339
+R
Sbjct: 270 LTKR 273
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 73 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 133 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 189
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 190 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 297
Query: 336 PDRR 339
+R
Sbjct: 298 LTKR 301
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 121/265 (45%), Gaps = 20/265 (7%)
Query: 89 ICKILEDRGGIDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKL 146
I KI E + + GA+ EV L K G A K I +S E+ + +K+
Sbjct: 20 IKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE--SSIENEIAVLRKI 77
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
+H NIV + + L + + + G L D + +KG A + + YLH
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
Query: 207 HHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMA 263
I+HRDL P N+L QDE + ++DFGLSK+ + D M+ G+ Y+A
Sbjct: 138 R---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV----MSTACGTPGYVA 190
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGP----SNRADTAVQVADRRAYEDSRPALSSL 319
PEV ++ Y K+VD +S +I + + G P N + Q+ + YE P +
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL-KAEYEFDSPYWDDI 249
Query: 320 YPEPIKALLRECWHKNPDRRPTFEE 344
+ K +R K+P++R T E+
Sbjct: 250 -SDSAKDFIRNLMEKDPNKRYTCEQ 273
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLW-QKLRHPNIVQFLGVL 158
G+Y +V LV+ + T+ A K ++ + ++ + E ++ Q HP +V
Sbjct: 20 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 79
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ RL F+ EY+ G L ++++ KL A Y+ +I+ +NYLH II+RDL
Sbjct: 80 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDL 136
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
NVL D GH+K+TD+G+ K + G+ Y+APE+ R E YG SVD
Sbjct: 137 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYGFSVDW 193
Query: 279 FSFALIVHEMFQG 291
++ +++ EM G
Sbjct: 194 WALGVLMFEMMAG 206
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 43/283 (15%)
Query: 102 GAYGEVYLVKWRG-------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
GA+G+V+L + +A K ++ + S R F +E L L+H +IV+F
Sbjct: 23 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTMLQHQHIVRF 79
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILKKK---------------GKLDPPTAVAYALDIA 199
GV L+ + EY+R+G L+ L+ G L +A A +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYS---YKMTGGT 256
GM YL +HRDL N L + +K+ DFG+S +D YS Y++ G T
Sbjct: 140 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMS-----RDIYSTDYYRVGGRT 191
Query: 257 G-SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS---NRADTAVQVADRRAYEDS 312
R+M PE + DV+SF +++ E+F G ++T + E
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE 251
Query: 313 RPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQES 355
RP P + A++R CW + P +R + +++ RL+A+ ++
Sbjct: 252 RPRAC---PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 104
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 161
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 162 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 269
Query: 336 PDRR 339
+R
Sbjct: 270 LTKR 273
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 11/247 (4%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V+ V K G +A K I I P +RN ++EL + + P IV F G
Sbjct: 20 GNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 77
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LKK G++ ++ + +G+ YL H I+HRD+
Sbjct: 78 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q D + + G+ YM+PE + Y D++
Sbjct: 136 PSNILVNSRGEIKLCDFGVS--GQLIDEMANEF---VGTRSYMSPERLQGTHYSVQSDIW 190
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
S L + EM G ++ D E S+++ + + +C KNP R
Sbjct: 191 SMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAER 250
Query: 340 PTFEEII 346
++++
Sbjct: 251 ADLKQLM 257
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 43/283 (15%)
Query: 102 GAYGEVYLVKWRG-------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
GA+G+V+L + +A K ++ + S R F +E L L+H +IV+F
Sbjct: 29 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTMLQHQHIVRF 85
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILKKK---------------GKLDPPTAVAYALDIA 199
GV L+ + EY+R+G L+ L+ G L +A A +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYS---YKMTGGT 256
GM YL +HRDL N L + +K+ DFG+S +D YS Y++ G T
Sbjct: 146 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMS-----RDIYSTDYYRVGGRT 197
Query: 257 G-SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS---NRADTAVQVADRRAYEDS 312
R+M PE + DV+SF +++ E+F G ++T + E
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE 257
Query: 313 RPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQES 355
RP P + A++R CW + P +R + +++ RL+A+ ++
Sbjct: 258 RPRAC---PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 43/283 (15%)
Query: 102 GAYGEVYLVKWRG-------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
GA+G+V+L + +A K ++ + S R F +E L L+H +IV+F
Sbjct: 52 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTMLQHQHIVRF 108
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILKKK---------------GKLDPPTAVAYALDIA 199
GV L+ + EY+R+G L+ L+ G L +A A +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYS---YKMTGGT 256
GM YL +HRDL N L + +K+ DFG+S +D YS Y++ G T
Sbjct: 169 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMS-----RDIYSTDYYRVGGRT 220
Query: 257 G-SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS---NRADTAVQVADRRAYEDS 312
R+M PE + DV+SF +++ E+F G ++T + E
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE 280
Query: 313 RPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQES 355
RP P + A++R CW + P +R + +++ RL+A+ ++
Sbjct: 281 RPRAC---PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 21/247 (8%)
Query: 99 IDPGAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G++G V LVK G A K + + + E + Q + P +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
K + L + EY+ G + L++ G+ P A YA I YLH +I+R
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESY 272
DL P N+L D+ G++KV DFG +K ++ G T G+ Y+APE+ + Y
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
K+VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLL 273
Query: 333 HKNPDRR 339
+ +R
Sbjct: 274 QVDLTKR 280
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G++KVTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLMIDQQGYIKVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 14/275 (5%)
Query: 95 DRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
DR + G YG VY + ++ I+ + R +E+ L + L+H NIVQ+
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRI-AIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILKKKG---KLDPPTAVAYALDIARGMNYLHHHRPH 211
LG + + E + GSL +L+ K K + T Y I G+ YLH ++
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-- 142
Query: 212 AIIHRDLTPSNVLQDE-AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR- 269
I+HRD+ NVL + +G LK++DFG SK + + TG+ +YMAPE+ +
Sbjct: 143 -IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKG 198
Query: 270 -ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-RRAYEDSRPALSSLYPEPIKAL 327
YGK+ D++S + EM G P Q A + P + KA
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 258
Query: 328 LRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTVP 362
+ +C+ +PD+R +++ S +KKT P
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQP 293
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 21/247 (8%)
Query: 99 IDPGAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G++G V LVK G A K + + + E + Q + P +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
K + L + EY+ G + L++ G+ P A YA I YLH +I+R
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESY 272
DL P N+L D+ G++KV DFG +K ++ G T G+ Y+APE+ + Y
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
K+VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLL 273
Query: 333 HKNPDRR 339
+ +R
Sbjct: 274 QVDLTKR 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLIIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIIISKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ +++++M G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G++KVTDFGL+K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLMIDQQGYIKVTDFGLAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 88 GICLTSTVQLIM--QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 142
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFG +K+ A+EK+ Y GG ++MA E
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 199
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 252
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 253 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 289
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLW-QKLRHPNIVQFLGVL 158
G+Y +V LV+ + T+ A + ++ + ++ + E ++ Q HP +V
Sbjct: 63 GSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 122
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ RL F+ EY+ G L ++++ KL A Y+ +I+ +NYLH II+RDL
Sbjct: 123 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDL 179
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
NVL D GH+K+TD+G+ K + G+ Y+APE+ R E YG SVD
Sbjct: 180 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF---CGTPNYIAPEILRGEDYGFSVDW 236
Query: 279 FSFALIVHEMFQG 291
++ +++ EM G
Sbjct: 237 WALGVLMFEMMAG 249
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 21/247 (8%)
Query: 99 IDPGAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G++G V LVK G A K + + + E + Q + P +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
K + L + EY+ G + L++ G+ P A YA I YLH +I+R
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESY 272
DL P N+L D+ G++KV DFG +K ++ G T G+ Y+APE+ + Y
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
K+VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLL 273
Query: 333 HKNPDRR 339
+ +R
Sbjct: 274 QVDLTKR 280
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 34/277 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R A++P+ + E + + +P++ + L
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 156 GV-LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G+ L + +LI + + G L D +++ K + + + + IA+GMNYL R +
Sbjct: 86 GICLTSTVQLIM--QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---L 140
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKI--AQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
+HRDL NVL H+K+TDFG +K+ A+EK+ Y GG ++MA E
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE---YHAEGGKVPIKWMALESILHRI 197
Query: 272 YGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
Y DV+S+ + V E+ + G P++ + ++ +R +P + ++ +
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTI---DV 250
Query: 325 KALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
++ +CW + D RP F E+I + Q+ V
Sbjct: 251 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLV 287
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 97
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 98 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 154
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 155 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWTLCGTPEYLAPEIILSKGYNKA 204
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 205 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 262
Query: 336 PDRR 339
+R
Sbjct: 263 LTKR 266
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + R ++ +A K + + V + +E+ + LRHPNI++ G
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ R+ + EY G+++ L+K + D Y ++A ++Y H R +IHRD+
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR---VIHRDIK 139
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L G LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 140 PENLLLGSNGELKIADFGWSVHAP-----SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRA-YEDSRPALSSLYPEPIKALLRECWHKNPDR 338
S ++ +E G P A T + R + E + P + E + L+ N +
Sbjct: 195 SLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT---EGARDLISRLLKHNASQ 251
Query: 339 RPTFEEII 346
R T E++
Sbjct: 252 RLTLAEVL 259
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 64 GADVNSLDRW--GRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG------- 114
ADV D W R ++ +R G G++G VY +G
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQ---------------GSFGMVYEGVAKGVVKDEPE 48
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A KT+ A++ R R F+ E + ++ ++V+ LGV+ + + + E + G
Sbjct: 49 TRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
Query: 175 SLHDILK-------KKGKLDPPT---AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
L L+ L PP+ + A +IA GM YL+ ++ +HRDL N +
Sbjct: 107 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 163
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMAPEVYRRESYGKSVDVFSFA 282
E +K+ DFG+++ E D Y GG G R+M+PE + + DV+SF
Sbjct: 164 VAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 220
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ + + R E P+ + L+R CW NP RP+F
Sbjct: 221 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 280
Query: 343 EEII 346
EII
Sbjct: 281 LEII 284
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V+ V K G +A K I I P +RN ++EL + + P IV F G
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 74
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LKK G++ ++ + +G+ YL H I+HRD+
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q DS + G+ YM+PE + Y D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVS--GQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIW 187
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPAL------------------SSLYP 321
S L + EM G + A EDSRP + S ++
Sbjct: 188 SMGLSLVEMAVG--------RYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS 239
Query: 322 EPIKALLRECWHKNPDRRPTFEEII 346
+ + +C KNP R ++++
Sbjct: 240 LEFQDFVNKCLIKNPAERADLKQLM 264
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 64 GADVNSLDRW--GRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG------- 114
ADV D W R ++ +R G G++G VY +G
Sbjct: 1 AADVYVPDEWEVAREKITMSRELGQ---------------GSFGMVYEGVAKGVVKDEPE 45
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A KT+ A++ R R F+ E + ++ ++V+ LGV+ + + + E + G
Sbjct: 46 TRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 103
Query: 175 SLHDILK-------KKGKLDPPT---AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
L L+ L PP+ + A +IA GM YL+ ++ +HRDL N +
Sbjct: 104 DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 160
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMAPEVYRRESYGKSVDVFSFA 282
E +K+ DFG+++ E D Y GG G R+M+PE + + DV+SF
Sbjct: 161 VAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 217
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ + + R E P+ + L+R CW NP RP+F
Sbjct: 218 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 277
Query: 343 EEII 346
EII
Sbjct: 278 LEII 281
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 64 GADVNSLDRW--GRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG------- 114
ADV D W R ++ +R G G++G VY +G
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQ---------------GSFGMVYEGVAKGVVKDEPE 48
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A KT+ A++ R R F+ E + ++ ++V+ LGV+ + + + E + G
Sbjct: 49 TRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
Query: 175 SLHDILK-------KKGKLDPPT---AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
L L+ L PP+ + A +IA GM YL+ ++ +HRDL N +
Sbjct: 107 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 163
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMAPEVYRRESYGKSVDVFSFA 282
E +K+ DFG+++ E D Y GG G R+M+PE + + DV+SF
Sbjct: 164 VAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 220
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ + + R E P+ + L+R CW NP RP+F
Sbjct: 221 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 280
Query: 343 EEII 346
EII
Sbjct: 281 LEII 284
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G+V L G ++A K I + + ++ +E+ + LRHP+I++ V+K
Sbjct: 15 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 74
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ +I + EY N L D + ++ K+ A + I + Y H H+ I+HRDL
Sbjct: 75 SKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLK 130
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKSVDV 278
P N+L DE ++K+ DFGLS I + + + GS Y APEV + Y G VDV
Sbjct: 131 PENLLLDEHLNVKIADFGLSNIMTDGNF----LKTSCGSPNYAAPEVISGKLYAGPEVDV 186
Query: 279 FSFALIVHEMF 289
+S +I++ M
Sbjct: 187 WSCGVILYVML 197
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWTLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 64 GADVNSLDRW--GRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG------- 114
ADV D W R ++ +R G G++G VY +G
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQ---------------GSFGMVYEGVAKGVVKDEPE 49
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A KT+ A++ R R F+ E + ++ ++V+ LGV+ + + + E + G
Sbjct: 50 TRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 175 SLHDILK-------KKGKLDPPT---AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
L L+ L PP+ + A +IA GM YL+ ++ +HRDL N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 164
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMAPEVYRRESYGKSVDVFSFA 282
E +K+ DFG+++ E D Y GG G R+M+PE + + DV+SF
Sbjct: 165 VAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ + + R E P+ + L+R CW NP RP+F
Sbjct: 222 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 281
Query: 343 EEII 346
EII
Sbjct: 282 LEII 285
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 11/246 (4%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G EV+L + ++A K +R+ +A +P F +E L HP IV +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 160 HSERL----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ EY+ +L DI+ +G + P A+ D + +N+ H + IIH
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIH 139
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RD+ P+N++ +KV DFG+++ + + + G+ +Y++PE R +S
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRP--ALSSLYPEPIKALLRECWH 333
DV+S +++E+ G P D+ VA + ED P A + A++ +
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 334 KNPDRR 339
KNP+ R
Sbjct: 260 KNPENR 265
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 21/264 (7%)
Query: 83 SFGHVVICKILEDRGGIDPGAYGEVYLVKWRGTE--IAAKTI-RSSIASNPRVRNSFMKE 139
+F H I + I G++G+V +V+ T+ A K + + VRN F KE
Sbjct: 13 NFDHFEILR------AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF-KE 65
Query: 140 LGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIA 199
L + Q L HP +V + E + + + L G L L++ T + ++
Sbjct: 66 LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELV 125
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY 259
++YL + R IIHRD+ P N+L DE GH+ +TDF ++ + + ++T G+
Sbjct: 126 MALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET----QITTMAGTK 178
Query: 260 RYMAPEVY---RRESYGKSVDVFSFALIVHEMFQG-GPSNRADTAVQVADRRAYEDSRPA 315
YMAPE++ + Y +VD +S + +E+ +G P + + +E +
Sbjct: 179 PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT 238
Query: 316 LSSLYPEPIKALLRECWHKNPDRR 339
S + + + +LL++ NPD+R
Sbjct: 239 YPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 64 GADVNSLDRW--GRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG------- 114
ADV D W R ++ +R G G++G VY +G
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQ---------------GSFGMVYEGVAKGVVKDEPE 55
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A KT+ A++ R R F+ E + ++ ++V+ LGV+ + + + E + G
Sbjct: 56 TRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
Query: 175 SLHDILK-------KKGKLDPPT---AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
L L+ L PP+ + A +IA GM YL+ ++ +HRDL N +
Sbjct: 114 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 170
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMAPEVYRRESYGKSVDVFSFA 282
E +K+ DFG+++ E D Y GG G R+M+PE + + DV+SF
Sbjct: 171 VAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ + + R E P+ + L+R CW NP RP+F
Sbjct: 228 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 287
Query: 343 EEII 346
EII
Sbjct: 288 LEII 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 64 GADVNSLDRW--GRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG------- 114
ADV D W R ++ +R G G++G VY +G
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQ---------------GSFGMVYEGVAKGVVKDEPE 46
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A KT+ A++ R R F+ E + ++ ++V+ LGV+ + + + E + G
Sbjct: 47 TRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 104
Query: 175 SLHDILK-------KKGKLDPPT---AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
L L+ L PP+ + A +IA GM YL+ ++ +HRDL N +
Sbjct: 105 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 161
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMAPEVYRRESYGKSVDVFSFA 282
E +K+ DFG+++ E D Y GG G R+M+PE + + DV+SF
Sbjct: 162 VAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 218
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ + + R E P+ + L+R CW NP RP+F
Sbjct: 219 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 278
Query: 343 EEII 346
EII
Sbjct: 279 LEII 282
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 64 GADVNSLDRW--GRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG------- 114
ADV D W R ++ +R G G++G VY +G
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQ---------------GSFGMVYEGVAKGVVKDEPE 55
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A KT+ A++ R R F+ E + ++ ++V+ LGV+ + + + E + G
Sbjct: 56 TRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
Query: 175 SLHDILK-------KKGKLDPPT---AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
L L+ L PP+ + A +IA GM YL+ ++ +HRDL N +
Sbjct: 114 DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 170
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMAPEVYRRESYGKSVDVFSFA 282
E +K+ DFG+++ E D Y GG G R+M+PE + + DV+SF
Sbjct: 171 VAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ + + R E P+ + L+R CW NP RP+F
Sbjct: 228 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 287
Query: 343 EEII 346
EII
Sbjct: 288 LEII 291
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE 140
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANSFVG 196
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G++KVTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLMIDQQGYIKVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 124/272 (45%), Gaps = 37/272 (13%)
Query: 102 GAYGEVYLVK-WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G YG VY K +G +A K IR A + + ++ ++E+ L ++L HPNIV + V+ H
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRIRLD-AEDEGIPSTAIREISLLKELHHPNIVSLIDVI-H 89
Query: 161 SERLIFLTEYLRNGSLHDIL-KKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
SER + L L +L + K L Y + RG+ + H HR I+HRDL
Sbjct: 90 SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLK 146
Query: 220 PSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYR-RESYGKSVD 277
P N+L + G LK+ DFGL++ SY++++ + Y AP+V + Y SVD
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKKYSTSVD 202
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
++S I EM G P T +D P + S+ P NP
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTD---------DDQLPKIFSILGTP-----------NPR 242
Query: 338 RRPTFEEIIFRLEAIQESFQKK----TVPSCC 365
P +E+ + + F+KK +P C
Sbjct: 243 EWPQVQELPLWKQRTFQVFEKKPWSSIIPGFC 274
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKWRGT-------EIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G ++A K ++S+ ++ + + M EL + L +H NIV
Sbjct: 49 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHENIVN 106
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA----------VAYALDIARGMN 203
LG H ++ +TEY G L + L++K + D + ++ +A+GM
Sbjct: 107 LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMA 166
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMA 263
+L IHRD+ NVL K+ DFGL++ +Y K ++MA
Sbjct: 167 FLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVKWMA 222
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSL 319
PE Y DV+S+ +++ E+F G P ++ + Y+ ++PA +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA-- 280
Query: 320 YPEPIKALLRECWHKNPDRRPTFEEII-FRLEAIQE 354
P+ I ++++ CW P RPTF++I F E QE
Sbjct: 281 -PKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 315
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G+++VTDFG +K ++ G T G+ Y+AP + + Y K+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPAIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N+L D+ G++KV DFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLLIDQQGYIKVADFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 64 GADVNSLDRW--GRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG------- 114
ADV D W R ++ +R G G++G VY +G
Sbjct: 33 AADVYVPDEWEVAREKITMSRELGQ---------------GSFGMVYEGVAKGVVKDEPE 77
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A KT+ A++ R R F+ E + ++ ++V+ LGV+ + + + E + G
Sbjct: 78 TRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 175 SLHDILK-------KKGKLDPPT---AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
L L+ L PP+ + A +IA GM YL+ ++ +HRDL N +
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 192
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMAPEVYRRESYGKSVDVFSFA 282
E +K+ DFG+++ E D Y GG G R+M+PE + + DV+SF
Sbjct: 193 VAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 249
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ + + R E P+ + L+R CW NP RP+F
Sbjct: 250 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 309
Query: 343 EEII 346
EII
Sbjct: 310 LEII 313
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANAFVG 194
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 124/272 (45%), Gaps = 37/272 (13%)
Query: 102 GAYGEVYLVK-WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G YG VY K +G +A K IR A + + ++ ++E+ L ++L HPNIV + V+ H
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRIRLD-AEDEGIPSTAIREISLLKELHHPNIVSLIDVI-H 89
Query: 161 SERLIFLTEYLRNGSLHDIL-KKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
SER + L L +L + K L Y + RG+ + H HR I+HRDL
Sbjct: 90 SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLK 146
Query: 220 PSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYR-RESYGKSVD 277
P N+L + G LK+ DFGL++ SY++++ + Y AP+V + Y SVD
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKKYSTSVD 202
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
++S I EM G P T +D P + S+ P NP
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTD---------DDQLPKIFSILGTP-----------NPR 242
Query: 338 RRPTFEEIIFRLEAIQESFQKK----TVPSCC 365
P +E+ + + F+KK +P C
Sbjct: 243 EWPQVQELPLWKQRTFQVFEKKPWSSIIPGFC 274
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 32/276 (11%)
Query: 102 GAYGEVYLVKWRGT-------EIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G ++A K ++S+ ++ + + M EL + L +H NIV
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHENIVN 114
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA----------VAYALDIARGMN 203
LG H ++ +TEY G L + L++K + D + ++ +A+GM
Sbjct: 115 LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMA 174
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMA 263
+L IHRD+ NVL K+ DFGL++ +Y K ++MA
Sbjct: 175 FLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVKWMA 230
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSRPALSSL 319
PE Y DV+S+ +++ E+F G P ++ + Y+ ++PA +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA-- 288
Query: 320 YPEPIKALLRECWHKNPDRRPTFEEII-FRLEAIQE 354
P+ I ++++ CW P RPTF++I F E QE
Sbjct: 289 -PKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 323
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G+++VTDFGL+K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLMIDQQGYIQVTDFGLAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G++KVTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLMIDQQGYIKVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 21/255 (8%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I GA G VY G E+A + + ++ P+ + + E+ + ++ ++PNIV +L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPK-KELIINEILVMRENKNPNIVNYLD 85
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ L + EYL GSL D++ + +D A + + + +LH ++ +IHR
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQ---VIHR 141
Query: 217 DLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
D+ N+L G +K+TDFG ++I E+ S + G+ +MAPEV R++YG
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAYGPK 197
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE----C 331
VD++S ++ EM +G P + ++ A + P L + PE + A+ R+ C
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQN--PEKLSAIFRDFLNRC 254
Query: 332 WHKNPDRRPTFEEII 346
+ ++R + +E+I
Sbjct: 255 LEMDVEKRGSAKELI 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 141
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANSFVG 197
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 42/281 (14%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKT--IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G +G+V+ K R I KT I+ +N + +E+ KL H NIV + G
Sbjct: 19 IGSGGFGQVFKAKHR---IDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIVHYNG 71
Query: 157 VL-----------KHSER-----LIFLTEYLRNGSLHD-ILKKKG-KLDPPTAVAYALDI 198
K+S R L E+ G+L I K++G KLD A+ I
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131
Query: 199 ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGS 258
+G++Y+H + +I+RDL PSN+ + +K+ DFGL + + D K G+
Sbjct: 132 TKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDG---KRXRSKGT 184
Query: 259 YRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPA-LS 317
RYM+PE + YGK VD+++ LI+ E+ + DTA + + + + D R +S
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL-----HVCDTAFETS--KFFTDLRDGIIS 237
Query: 318 SLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQK 358
++ + K LL++ K P+ RP EI+ L ++S +K
Sbjct: 238 DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 127/253 (50%), Gaps = 16/253 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GA+G+V+LV+ R G E KTI + P E+ + + L HPNI++ V +
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTINKDRSQVPM--EQIEAEIEVLKSLDHPNIIKIFEVFE 90
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGM-NYLHHHRPHAIIHRDL 218
+ + E G L + + + Y ++ + M N L + ++H+DL
Sbjct: 91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDL 150
Query: 219 TPSNVL-QDEAGH--LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
P N+L QD + H +K+ DFGL+++ + D +S T G+ YMAPEV++R+ K
Sbjct: 151 KPENILFQDTSPHSPIKIIDFGLAELFK-SDEHS---TNAAGTALYMAPEVFKRDVTFK- 205
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSS--LYPEPIKALLRECWH 333
D++S ++++ + G + +V + Y++ A+ L P+ + LL++
Sbjct: 206 CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVD-LLKQMLT 264
Query: 334 KNPDRRPTFEEII 346
K+P+RRP+ +++
Sbjct: 265 KDPERRPSAAQVL 277
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 117
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 118 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 173
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 56 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 115
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 116 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 171
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 194
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 57 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 116
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 117 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 172
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 27/264 (10%)
Query: 102 GAYGEVYLVKWRG-------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY +G T +A KT+ A++ R R F+ E + ++ ++V+
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRL 80
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK-------KKGKLDPPT---AVAYALDIARGMNY 204
LGV+ + + + E + G L L+ L PP+ + A +IA GM Y
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYM 262
L+ ++ +HRDL N + E +K+ DFG+++ E D Y GG G R+M
Sbjct: 141 LNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWM 194
Query: 263 APEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE 322
+PE + + DV+SF +++ E+ + + R E P+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD 254
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
+ L+R CW NP RP+F EII
Sbjct: 255 MLFELMRMCWQYNPKMRPSFLEII 278
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 118
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 119 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 174
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 86 RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 146 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 201
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 196
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 18/253 (7%)
Query: 102 GAYGEVYLVKWRGTEI--AAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYGEV L + + T + A K IR + S + ++E+ + + L HPNI++ +
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSS-NSKLLEEVAVLKLLDHPNIMKLYDFFE 106
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E + G L D + + K + A + G+ YLH H I+HRDL
Sbjct: 107 DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLK 163
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L +++ +K+ DFGLS + + + KM G+ Y+APEV R++ Y +
Sbjct: 164 PENLLLESKEKDALIKIVDFGLSAVFENQK----KMKERLGTAYYIAPEVLRKK-YDEKC 218
Query: 277 DVFSFALIVHEMFQGGPSNRADTAVQV---ADRRAYEDSRPALSSLYPEPIKALLRECWH 333
DV+S +I+ + G P T ++ ++ Y P ++ E K L+++
Sbjct: 219 DVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV-SEGAKDLIKQMLQ 277
Query: 334 KNPDRRPTFEEII 346
+ RR + ++ +
Sbjct: 278 FDSQRRISAQQAL 290
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 137
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANSFVG 193
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 196
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 141
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 197
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 196
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 194
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 194
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 196
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 143
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 144 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 199
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 196
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 63 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 122
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 123 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 178
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 14/259 (5%)
Query: 95 DRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
DR + G YG VY + ++ I+ + R +E+ L + L+H NIVQ+
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRI-AIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILKKKG---KLDPPTAVAYALDIARGMNYLHHHRPH 211
LG + + E + GSL +L+ K K + T Y I G+ YLH ++
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-- 128
Query: 212 AIIHRDLTPSNVLQDE-AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR- 269
I+HRD+ NVL + +G LK++DFG SK + + TG+ +YMAPE+ +
Sbjct: 129 -IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKG 184
Query: 270 -ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-RRAYEDSRPALSSLYPEPIKAL 327
YGK+ D++S + EM G P Q A + P + KA
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 244
Query: 328 LRECWHKNPDRRPTFEEII 346
+ +C+ +PD+R +++
Sbjct: 245 ILKCFEPDPDKRACANDLL 263
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 13/240 (5%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK + G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY+ G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L D+ G+++VTDFG +K + + ++ + G + +APE+ + Y K+VD +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGR---TWXLCGTPEA---LAPEIILSKGYNKAVDWW 222
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
+ ++++EM G P AD +Q+ ++ R S + +K LLR + +R
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P +V+ K
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G+++VTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 169 PENLMIDQQGYIQVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 276
Query: 336 PDRR 339
+R
Sbjct: 277 LTKR 280
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 15/252 (5%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYGEV L K + G E A K I+ S + + + E+ + ++L HPNI++ +
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 74
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E R G L D + + K A + G YLH H I+HRDL
Sbjct: 75 DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLK 131
Query: 220 PSNVLQDEAGH---LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L + +K+ DFGLS + KM G+ Y+APEV R++ Y +
Sbjct: 132 PENLLLESKSRDALIKIVDFGLSAHFE----VGGKMKERLGTAYYIAPEVLRKK-YDEKC 186
Query: 277 DVFSFALIVHEMFQGGPSNRADTAVQVADR--RAYEDSRPALSSLYPEPIKALLRECWHK 334
DV+S +I++ + G P T ++ R + P + + K L++
Sbjct: 187 DVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTY 246
Query: 335 NPDRRPTFEEII 346
P +R + EE +
Sbjct: 247 EPSKRISAEEAL 258
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + + +A K + S V + +E+ + LRHPNI++
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+R+ + E+ G L+ L+K G+ D + + ++A ++Y H + +IHRD+
Sbjct: 85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIK 141
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L G LK+ DFG S A S + G+ Y+ PE+ +++ + VD++
Sbjct: 142 PENLLMGYKGELKIADFGWSVHAP-----SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSR--PALSSLYPEPIKALLRECWHKNPD 337
++ +E G P + + + R D + P LS + I LLR + P
Sbjct: 197 CAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR---YHPPQ 253
Query: 338 RRP 340
R P
Sbjct: 254 RLP 256
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYGEV L K + G E A K I+ S + + + E+ + ++L HPNI++ +
Sbjct: 32 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 91
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E R G L D + + K A + G YLH H I+HRDL
Sbjct: 92 DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLK 148
Query: 220 PSNVLQDEAGH---LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L + +K+ DFGLS + KM G+ Y+APEV R++ Y +
Sbjct: 149 PENLLLESKSRDALIKIVDFGLSAHFE----VGGKMKERLGTAYYIAPEVLRKK-YDEKC 203
Query: 277 DVFSFALIVHEMFQGGPSNRADTAVQVADR 306
DV+S +I++ + G P T ++ R
Sbjct: 204 DVWSCGVILYILLCGYPPFGGQTDQEILKR 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 138 KELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD 197
+E + +L HP V+ + E+L F Y +NG L ++K G D Y +
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 137
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
I + YLH IIHRDL P N+L +E H+++TDFG +K+ +S + G
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG 193
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRA 297
+ +Y++PE+ +S KS D+++ I++++ G P RA
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + + +A K + S V + +E+ + LRHPNI++
Sbjct: 26 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 85
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+R+ + E+ G L+ L+K G+ D + + ++A ++Y H + +IHRD+
Sbjct: 86 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIK 142
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L G LK+ DFG S A S + G+ Y+ PE+ +++ + VD++
Sbjct: 143 PENLLMGYKGELKIADFGWSVHAP-----SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 197
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSR--PALSSLYPEPIKALLRECWHKNPD 337
++ +E G P + + + R D + P LS + I LLR + P
Sbjct: 198 CAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR---YHPPQ 254
Query: 338 RRP 340
R P
Sbjct: 255 RLP 257
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + + +A K + S V + +E+ + LRHPNI++
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+R+ + E+ G L+ L+K G+ D + + ++A ++Y H + +IHRD+
Sbjct: 85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIK 141
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L G LK+ DFG S A S + G+ Y+ PE+ +++ + VD++
Sbjct: 142 PENLLMGYKGELKIADFGWSVHAP-----SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSR--PALSSLYPEPIKALLRECWHKNPD 337
++ +E G P + + + R D + P LS + I LLR + P
Sbjct: 197 CAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR---YHPPQ 253
Query: 338 RRP 340
R P
Sbjct: 254 RLP 256
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 129/255 (50%), Gaps = 21/255 (8%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I GA G VY G E+A + + ++ P+ + + E+ + ++ ++PNIV +L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPK-KELIINEILVMRENKNPNIVNYLD 84
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ L + EYL GSL D++ + +D A + + + +LH ++ +IHR
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQ---VIHR 140
Query: 217 DLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
D+ N+L G +K+TDFG ++I E+ S + G+ +MAPEV R++YG
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAYGPK 196
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE----C 331
VD++S ++ EM +G P + ++ A + P L + PE + A+ R+ C
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQN--PEKLSAIFRDFLNRC 253
Query: 332 WHKNPDRRPTFEEII 346
+ ++R + +E++
Sbjct: 254 LEMDVEKRGSAKELL 268
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P + + K
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G++KVTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLMIDQQGYIKVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P + + K
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G++KVTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLMIDQQGYIKVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 26/265 (9%)
Query: 102 GAYGEVY---LVKWRGTEI--AAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
G +GEVY +G +I A KT + + + FM E + + L HP+IV+ +G
Sbjct: 35 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIVKLIG 92
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+++ I + Y H + + K L T V Y+L I + M YL +HR
Sbjct: 93 IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHR 149
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
D+ N+L +K+ DFGLS+ +++D Y +T ++M+PE + +
Sbjct: 150 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT--RLPIKWMSPESINFRRFTTAS 207
Query: 277 DVFSFALIVHEMFQGGPS------NRADTAV-QVADRRAYEDSRPALSSLYPEPIKALLR 329
DV+ FA+ + E+ G N+ V + DR D L P + L+
Sbjct: 208 DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD-------LCPPVLYTLMT 260
Query: 330 ECWHKNPDRRPTFEEIIFRLEAIQE 354
CW +P RP F E++ L + +
Sbjct: 261 RCWDYDPSDRPRFTELVCSLSDVYQ 285
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 44/304 (14%)
Query: 64 GADVNSLDRW--GRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRG------- 114
ADV D W R ++ +R G G++G VY +G
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQ---------------GSFGMVYEGVAKGVVKDEPE 49
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNG 174
T +A KT+ A++ R R F+ E + ++ ++V+ LGV+ + + + E + G
Sbjct: 50 TRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 175 SLHDILK-------KKGKLDPPT---AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
L L+ L PP+ + A +IA GM YL+ ++ +HRDL N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCM 164
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMAPEVYRRESYGKSVDVFSFA 282
E +K+ DFG+++ E D GG G R+M+PE + + DV+SF
Sbjct: 165 VAEDFTVKIGDFGMTRDIXETDXXR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
+++ E+ + + R E P+ + L+R CW NP RP+F
Sbjct: 222 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 281
Query: 343 EEII 346
EII
Sbjct: 282 LEII 285
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 26/265 (9%)
Query: 102 GAYGEVY---LVKWRGTEI--AAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
G +GEVY +G +I A KT + + + FM E + + L HP+IV+ +G
Sbjct: 23 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIVKLIG 80
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+++ I + Y H + + K L T V Y+L I + M YL +HR
Sbjct: 81 IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHR 137
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
D+ N+L +K+ DFGLS+ +++D Y +T ++M+PE + +
Sbjct: 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT--RLPIKWMSPESINFRRFTTAS 195
Query: 277 DVFSFALIVHEMFQGGPS------NRADTAV-QVADRRAYEDSRPALSSLYPEPIKALLR 329
DV+ FA+ + E+ G N+ V + DR D L P + L+
Sbjct: 196 DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD-------LCPPVLYTLMT 248
Query: 330 ECWHKNPDRRPTFEEIIFRLEAIQE 354
CW +P RP F E++ L + +
Sbjct: 249 RCWDYDPSDRPRFTELVCSLSDVYQ 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 129/255 (50%), Gaps = 21/255 (8%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I GA G VY G E+A + + ++ P+ + + E+ + ++ ++PNIV +L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPK-KELIINEILVMRENKNPNIVNYLD 84
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ L + EYL GSL D++ + +D A + + + +LH ++ +IHR
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQ---VIHR 140
Query: 217 DLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
D+ N+L G +K+TDFG ++I E+ K + G+ +MAPEV R++YG
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE----C 331
VD++S ++ EM +G P + ++ A + P L + PE + A+ R+ C
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQN--PEKLSAIFRDFLNRC 253
Query: 332 WHKNPDRRPTFEEII 346
+ ++R + +E++
Sbjct: 254 LDMDVEKRGSAKELL 268
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 38 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +AQ+ SY GG ++M
Sbjct: 158 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 274
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 275 VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 126/254 (49%), Gaps = 19/254 (7%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I GA G VY G E+A + + ++ P+ + + E+ + ++ ++PNIV +L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPK-KELIINEILVMRENKNPNIVNYLD 84
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ L + EYL GSL D++ + +D A + + + +LH ++ +IHR
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQ---VIHR 140
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
D+ N+L G +K+TDFG + S +M G + +MAPEV R++YG V
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVG---TPYWMAPEVVTRKAYGPKV 197
Query: 277 DVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE----CW 332
D++S ++ EM +G P + ++ A + P L + PE + A+ R+ C
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQN--PEKLSAIFRDFLNRCL 254
Query: 333 HKNPDRRPTFEEII 346
+ ++R + +E++
Sbjct: 255 DMDVEKRGSAKELL 268
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 21/244 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++G V LVK G A K + + + E + Q + P + + K
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ L + EY G + L++ G+ P A YA I YLH +I+RDL
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT----GSYRYMAPEVYRRESYGKS 275
P N++ D+ G++KVTDFG +K ++ G T G+ Y+APE+ + Y K+
Sbjct: 170 PENLMIDQQGYIKVTDFGFAK----------RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VD ++ ++++EM G P AD +Q+ ++ R S + +K LLR +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVD 277
Query: 336 PDRR 339
+R
Sbjct: 278 LTKR 281
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 26/265 (9%)
Query: 102 GAYGEVY---LVKWRGTEI--AAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
G +GEVY +G +I A KT + + + FM E + + L HP+IV+ +G
Sbjct: 19 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIVKLIG 76
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+++ I + Y H + + K L T V Y+L I + M YL +HR
Sbjct: 77 IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHR 133
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
D+ N+L +K+ DFGLS+ +++D Y +T ++M+PE + +
Sbjct: 134 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT--RLPIKWMSPESINFRRFTTAS 191
Query: 277 DVFSFALIVHEMFQGGPS------NRADTAV-QVADRRAYEDSRPALSSLYPEPIKALLR 329
DV+ FA+ + E+ G N+ V + DR D L P + L+
Sbjct: 192 DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD-------LCPPVLYTLMT 244
Query: 330 ECWHKNPDRRPTFEEIIFRLEAIQE 354
CW +P RP F E++ L + +
Sbjct: 245 RCWDYDPSDRPRFTELVCSLSDVYQ 269
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 129/255 (50%), Gaps = 21/255 (8%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I GA G VY G E+A + + ++ P+ + + E+ + ++ ++PNIV +L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPK-KELIINEILVMRENKNPNIVNYLD 85
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ L + EYL GSL D++ + +D A + + + +LH ++ +IHR
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQ---VIHR 141
Query: 217 DLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
++ N+L G +K+TDFG ++I E+ K + G+ +MAPEV R++YG
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE----C 331
VD++S ++ EM +G P + ++ A + P L + PE + A+ R+ C
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPELQN--PEKLSAIFRDFLNRC 254
Query: 332 WHKNPDRRPTFEEII 346
+ ++R + +E+I
Sbjct: 255 LEMDVEKRGSAKELI 269
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 77
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 134
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 249
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 250 PSARITIPDI 259
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 77
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 134
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 249
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 250 PSARITIPDI 259
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LVK + T A K ++ + + E + Q RHP FL LK
Sbjct: 21 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP----FLTALK 76
Query: 160 HS----ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+S +RL F+ EY G L L ++ A Y +I ++YLH + +++
Sbjct: 77 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVY 134
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL N++ D+ GH+K+TDFGL K KD + K GT Y+APEV YG++
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKXFCGTPE--YLAPEVLEDNDYGRA 191
Query: 276 VDVFSFALIVHEMFQG 291
VD + ++++EM G
Sbjct: 192 VDWWGLGVVMYEMMCG 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LVK + T A K ++ + + E + Q RHP FL LK
Sbjct: 20 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP----FLTALK 75
Query: 160 HS----ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+S +RL F+ EY G L L ++ A Y +I ++YLH + +++
Sbjct: 76 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVY 133
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL N++ D+ GH+K+TDFGL K KD + K GT Y+APEV YG++
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKXFCGTPE--YLAPEVLEDNDYGRA 190
Query: 276 VDVFSFALIVHEMFQG 291
VD + ++++EM G
Sbjct: 191 VDWWGLGVVMYEMMCG 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LVK + T A K ++ + + E + Q RHP FL LK
Sbjct: 19 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP----FLTALK 74
Query: 160 HS----ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+S +RL F+ EY G L L ++ A Y +I ++YLH + +++
Sbjct: 75 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVY 132
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL N++ D+ GH+K+TDFGL K KD + K GT Y+APEV YG++
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKXFCGTPE--YLAPEVLEDNDYGRA 189
Query: 276 VDVFSFALIVHEMFQG 291
VD + ++++EM G
Sbjct: 190 VDWWGLGVVMYEMMCG 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LVK + T A K ++ + + E + Q RHP FL LK
Sbjct: 162 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP----FLTALK 217
Query: 160 HS----ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+S +RL F+ EY G L L ++ A Y +I ++YLH + +++
Sbjct: 218 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVY 275
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL N++ D+ GH+K+TDFGL K KD + K GT Y+APEV YG++
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKTFCGTPE--YLAPEVLEDNDYGRA 332
Query: 276 VDVFSFALIVHEMFQG 291
VD + ++++EM G
Sbjct: 333 VDWWGLGVVMYEMMCG 348
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSI-ASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G VY T +A K + + + + ++ F +E+ + K +H N+V+ LG
Sbjct: 33 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSD 92
Query: 161 SERLIFLTEYLRNGSLHDILKKKGKLD--PPTA----VAYALDIARGMNYLH--HHRPHA 212
+ L + Y NGSL D L LD PP + A A G+N+LH HH
Sbjct: 93 GDDLCLVYVYXPNGSLLDRL---SCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---- 145
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
IHRD+ +N+L DEA K++DFGL++ A EK + + G+ Y APE R E
Sbjct: 146 -IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVXXSRIVGTTAYXAPEALRGEIT 203
Query: 273 GKSVDVFSFALIVHEMFQGGPS 294
KS D++SF +++ E+ G P+
Sbjct: 204 PKS-DIYSFGVVLLEIITGLPA 224
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 77
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 134
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 249
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 250 PSARITIPDI 259
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 77
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 134
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 249
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 250 PSARITIPDI 259
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 16 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 75
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 76 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 132
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 133 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 191
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 192 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 247
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 248 PSARITIPDI 257
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LVK + T A K ++ + + E + Q RHP FL LK
Sbjct: 159 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP----FLTALK 214
Query: 160 HS----ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+S +RL F+ EY G L L ++ A Y +I ++YLH + +++
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVY 272
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL N++ D+ GH+K+TDFGL K KD + K GT Y+APEV YG++
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKTFCGTPE--YLAPEVLEDNDYGRA 329
Query: 276 VDVFSFALIVHEMFQG 291
VD + ++++EM G
Sbjct: 330 VDWWGLGVVMYEMMCG 345
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 77
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 134
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 249
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 250 PSARITIPDI 259
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 27/264 (10%)
Query: 102 GAYGEVYLVKWRG-------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY +G T +A KT+ A++ R R F+ E + ++ ++V+
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRL 80
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK-------KKGKLDPPT---AVAYALDIARGMNY 204
LGV+ + + + E + G L L+ L PP+ + A +IA GM Y
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYM 262
L+ ++ +HRDL N E +K+ DFG+++ E D Y GG G R+M
Sbjct: 141 LNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWM 194
Query: 263 APEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE 322
+PE + + DV+SF +++ E+ + + R E P+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD 254
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
+ L+R CW NP RP+F EII
Sbjct: 255 MLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + KL H NIV
Sbjct: 52 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 111
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 288
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 289 VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 28/278 (10%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G+V L + G +A K ++ P++R+ + +E+ + + L H +IV++
Sbjct: 19 GHFGKVSLYCYDPTNDGTGEMVAVKALKE--GCGPQLRSGWQREIEILRTLYHEHIVKYK 76
Query: 156 GVLKHS--ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G + + + + EY+ GSL D L + + + +A I GM YLH
Sbjct: 77 GCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLH---AQHY 132
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYG 273
IHR L NVL D +K+ DFGL+K E Y G + APE + +
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 274 KSVDVFSFALIVHEMFQGGPSNRA----------DTAVQVADRRAYE----DSRPALSSL 319
+ DV+SF + ++E+ SN++ T Q+ R E R
Sbjct: 193 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDR 252
Query: 320 YPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQ 357
P I L++ CW RPTF+ ++ L+ QE +Q
Sbjct: 253 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + KL H NIV
Sbjct: 38 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 97
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 158 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 274
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 275 VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 19/265 (7%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRN-----SFMKELGLWQKLRHPNIVQ 153
I G +G VY ++ + A I+ +I S R+ +F++E L + L HPN++
Sbjct: 29 IGKGHFGVVYHGEY--IDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 154 FLGVLKHSERLI-FLTEYLRNGSLHDILKKKGKLDPPTA---VAYALDIARGMNYLHHHR 209
+G++ E L L Y+ +G L ++ + PT +++ L +ARGM YL +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLAEQK 144
Query: 210 PHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM-TGGTGSYRYMAPEVYR 268
+HRDL N + DE+ +KV DFGL++ +++ YS + ++ A E +
Sbjct: 145 ---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 269 RESYGKSVDVFSFALIVHEMF-QGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKAL 327
+ DV+SF +++ E+ +G P R + A + R P+ + +
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPEYCPDSLYQV 260
Query: 328 LRECWHKNPDRRPTFEEIIFRLEAI 352
+++CW +P RPTF ++ +E I
Sbjct: 261 MQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 99 IDPGAYGEVYLVKWRG-------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNI 151
I GA+G V+ + G T +A K ++ +++ ++ F +E L + +PNI
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD--MQADFQREAALMAEFDNPNI 112
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKK----------------KGKLD----PPTA 191
V+ LGV + + L EY+ G L++ L+ + ++ PP +
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 192 VAYALDIAR----GMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDS 247
A L IAR GM YL + +HRDL N L E +K+ DFGLS+ D
Sbjct: 173 CAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD- 228
Query: 248 YSYKMTGGTG-SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADR 306
YK G R+M PE Y DV+++ +++ E+F G A +
Sbjct: 229 -YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 287
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEI 345
+ + A P + L+R CW K P RP+F I
Sbjct: 288 YVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI 326
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 77
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 134
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 249
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 250 PSARITIPDI 259
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 28/278 (10%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G+V L + G +A K ++ P++R+ + +E+ + + L H +IV++
Sbjct: 20 GHFGKVSLYCYDPTNDGTGEMVAVKALKE--GCGPQLRSGWQREIEILRTLYHEHIVKYK 77
Query: 156 GVLKHS--ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G + + + + EY+ GSL D L + + + +A I GM YLH
Sbjct: 78 GCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLH---AQHY 133
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYG 273
IHR L NVL D +K+ DFGL+K E Y G + APE + +
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 274 KSVDVFSFALIVHEMFQGGPSNRA----------DTAVQVADRRAYE----DSRPALSSL 319
+ DV+SF + ++E+ SN++ T Q+ R E R
Sbjct: 194 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDR 253
Query: 320 YPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQ 357
P I L++ CW RPTF+ ++ L+ QE +Q
Sbjct: 254 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 43/272 (15%)
Query: 102 GAYGEVY------LVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY ++K T +A KT+ S ++ R R F+ E + + ++V+
Sbjct: 27 GSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHVVRL 84
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK--------KKGKLDPPT---AVAYALDIARGMN 203
LGV+ + + + E + +G L L+ G+ PPT + A +IA GM
Sbjct: 85 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIADGMA 143
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRY 261
YL+ + +HRDL N + +K+ DFG+++ E D Y GG G R+
Sbjct: 144 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRW 197
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRP 314
MAPE + + S D++SF +++ E+ +QG + + V D+
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN-- 255
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + L+R CW NP RPTF EI+
Sbjct: 256 -----CPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREG 77
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 134
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 249
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 250 PSARITIPDI 259
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + L H N+V+F G +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREG 77
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 134
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 194 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 249
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 250 PSARITIPDI 259
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 12/232 (5%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSL 176
A K + S+ P R E+ + + L H ++V F G + ++ + + E R SL
Sbjct: 43 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL 102
Query: 177 HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDF 236
++ K++ L P A Y I G YLH +R +IHRDL N+ +E +K+ DF
Sbjct: 103 LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDF 159
Query: 237 GLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNR 296
GL+ E D K+ GT +Y +APEV ++ + VDV+S I++ + G P
Sbjct: 160 GLAT-KVEYDGERKKVLCGTPNY--IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
Query: 297 ADTAVQVADR-RAYEDSRPALSSLYPEPIKA-LLRECWHKNPDRRPTFEEII 346
+ R + E S P + P+ A L+++ +P RPT E++
Sbjct: 217 TSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 43/272 (15%)
Query: 102 GAYGEVY------LVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY ++K T +A KT+ S ++ R R F+ E + + ++V+
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK--------KKGKLDPPT---AVAYALDIARGMN 203
LGV+ + + + E + +G L L+ G+ PPT + A +IA GM
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIADGMA 144
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRY 261
YL+ + +HRDL N + +K+ DFG+++ E D Y GG G R+
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRW 198
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRP 314
MAPE + + S D++SF +++ E+ +QG + + V D+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN-- 256
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + L+R CW NP RPTF EI+
Sbjct: 257 -----CPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 27/264 (10%)
Query: 102 GAYGEVYLVKWRG-------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY +G T +A KT+ A++ R R F+ E + ++ ++V+
Sbjct: 21 GSFGMVYEGVAKGVVKDEPETRVAIKTVNE--AASMRERIEFLNEASVMKEFNCHHVVRL 78
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK-------KKGKLDPPT---AVAYALDIARGMNY 204
LGV+ + + + E + G L L+ L PP+ + A +IA GM Y
Sbjct: 79 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 138
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYM 262
L+ ++ +HRDL N + E +K+ DFG+++ E D GG G R+M
Sbjct: 139 LNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR---KGGKGLLPVRWM 192
Query: 263 APEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE 322
+PE + + DV+SF +++ E+ + + R E P+
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD 252
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
+ L+R CW NP RP+F EII
Sbjct: 253 MLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 28/274 (10%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
GA+G VY W +A K +R + ++P+ + E + + P + + L
Sbjct: 28 GAFGTVYKGIWIPDGENVKIPVAIKVLREN--TSPKANKEILDEAYVMAGVGSPYVSRLL 85
Query: 156 GVLKHSERLIFLTEYLRNGSLHD-ILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
G+ S + +T+ + G L D + + +G+L + + + IA+GM+YL R ++
Sbjct: 86 GICLTST-VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR---LV 141
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGK 274
HRDL NVL H+K+TDFGL+++ + D Y GG ++MA E R +
Sbjct: 142 HRDLAARNVLVKSPNHVKITDFGLARLL-DIDETEYHADGGKVPIKWMALESILRRRFTH 200
Query: 275 SVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKAL 327
DV+S+ + V E+ + G P+ ++ +R +P + ++ + +
Sbjct: 201 QSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL----PQPPICTI---DVYMI 253
Query: 328 LRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTV 361
+ +CW + + RP F E++ + Q+ V
Sbjct: 254 MVKCWMIDSECRPRFRELVSEFSRMARDPQRFVV 287
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 26/269 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRH 148
++ E G + GA+G+VY K + G AAK I + + ++ E+ + H
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDH 67
Query: 149 PNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGK-LDPPTAVAYALDIARGMNYLHH 207
P IV+ LG H +L + E+ G++ I+ + + L P + +N+LH
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS----KIAQEKDSYSYKMTGGTGSYRYMA 263
R IIHRDL NVL G +++ DFG+S K Q++DS+ G+ +MA
Sbjct: 128 KR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-------IGTPYWMA 177
Query: 264 PEVYRRES-----YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS- 317
PEV E+ Y D++S + + EM Q P + ++V + A D L+
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP 237
Query: 318 SLYPEPIKALLRECWHKNPDRRPTFEEII 346
S + + L+ KNP+ RP+ +++
Sbjct: 238 SKWSVEFRDFLKIALDKNPETRPSAAQLL 266
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A K I + ++ ++ F +E+ + + L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G++ A A I + Y H I+HR
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHR 137
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + ++ K+ GS Y APE+++ + Y G
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI------KALLR 329
VDV+S +I++ + G ++ +R L Y P + LL+
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRER--------VLRGKYRIPFYMSTDCENLLK 245
Query: 330 ECWHKNPDRRPTFEEII 346
+ NP +R T E+I+
Sbjct: 246 KFLILNPSKRGTLEQIM 262
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 37 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 157 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 273
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 274 VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 29 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 88
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 149 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 265
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 266 VYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A K I + ++ ++ F +E+ + + L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G++ A A I + Y H I+HR
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHR 137
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + ++ K+ GS Y APE+++ + Y G
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI------KALLR 329
VDV+S +I++ + G ++ +R L Y P + LL+
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRER--------VLRGKYRIPFYMSTDCENLLK 245
Query: 330 ECWHKNPDRRPTFEEII 346
+ NP +R T E+I+
Sbjct: 246 KFLILNPSKRGTLEQIM 262
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 20/267 (7%)
Query: 89 ICKILEDRGGIDPGAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKL 146
I I + R + GA+ EV L + + T+ +A K I S E+ + K+
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKI 73
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
+HPNIV + + L + + + G L D + +KG A + + YLH
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 207 HHRPHAIIHRDLTPSNVLQ---DEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMA 263
I+HRDL P N+L DE + ++DFGLSK+ +D S ++ G+ Y+A
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV-LSTACGTPGYVA 186
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGP----SNRADTAVQVADRRAYEDSRPALSSL 319
PEV ++ Y K+VD +S +I + + G P N A Q+ + YE P +
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL-KAEYEFDSPYWDDI 245
Query: 320 YPEPIKALLRECWHKNPDRRPTFEEII 346
+ K +R K+P++R T E+ +
Sbjct: 246 -SDSAKDFIRHLMEKDPEKRFTCEQAL 271
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GAYGEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 14/249 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + + + + T+ A K + S+ P R E+ + + L H ++V F G +
Sbjct: 50 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 109
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
++ + + E R SL ++ K++ L P A Y I G YLH +R +IHRDL
Sbjct: 110 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLK 166
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N+ +E +K+ DFGL+ E D K+ GT +Y +APEV ++ + VDV+
Sbjct: 167 LGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCGTPNY--IAPEVLSKKGHSFEVDVW 223
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEPIKA-LLRECWHKNPD 337
S I++ + G P + R + E S P + P+ A L+++ +P
Sbjct: 224 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPT 279
Query: 338 RRPTFEEII 346
RPT E++
Sbjct: 280 ARPTINELL 288
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 102 GAYGEVYLVKWRGT-------EIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G ++A K ++S+ ++ + + M EL + L +H NIV
Sbjct: 42 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHENIVN 99
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKKGK--LDPPTA-------------------- 191
LG H ++ +TEY G L + L++K + L P A
Sbjct: 100 LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRD 159
Query: 192 -VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSY 250
+ ++ +A+GM +L IHRD+ NVL K+ DFGL++ +Y
Sbjct: 160 LLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 216
Query: 251 KMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADR 306
K ++MAPE Y DV+S+ +++ E+F G P ++ +
Sbjct: 217 KGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 275
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII-FRLEAIQE 354
Y+ ++PA + P+ I ++++ CW P RPTF++I F E QE
Sbjct: 276 DGYQMAQPAFA---PKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 321
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 25/257 (9%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A K I + NP +E+ + + L HPNIV+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKT-QLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G++ A + I + Y H R I+HR
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHR 135
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + + K+ GS Y APE+++ + Y G
Sbjct: 136 DLKAENLLLDADMNIKIADFGFSN----EFTVGGKLDTFCGSPPYAAPELFQGKKYDGPE 191
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI------KALLR 329
VDV+S +I++ + G ++ +R L Y P + LL+
Sbjct: 192 VDVWSLGVILYTLVSGSLPFDGQNLKELRER--------VLRGKYRIPFYMSTDCENLLK 243
Query: 330 ECWHKNPDRRPTFEEII 346
NP +R T E+I+
Sbjct: 244 RFLVLNPIKRGTLEQIM 260
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 37 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 157 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 273
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 274 VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 14/249 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + + + + T+ A K + S+ P R E+ + + L H ++V F G +
Sbjct: 52 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 111
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
++ + + E R SL ++ K++ L P A Y I G YLH +R +IHRDL
Sbjct: 112 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLK 168
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N+ +E +K+ DFGL+ E D K+ GT +Y +APEV ++ + VDV+
Sbjct: 169 LGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCGTPNY--IAPEVLSKKGHSFEVDVW 225
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEPIKA-LLRECWHKNPD 337
S I++ + G P + R + E S P + P+ A L+++ +P
Sbjct: 226 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPT 281
Query: 338 RRPTFEEII 346
RPT E++
Sbjct: 282 ARPTINELL 290
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 26/269 (9%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRH 148
++ E G + GA+G+VY K + G AAK I + + ++ E+ + H
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDH 75
Query: 149 PNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGK-LDPPTAVAYALDIARGMNYLHH 207
P IV+ LG H +L + E+ G++ I+ + + L P + +N+LH
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS----KIAQEKDSYSYKMTGGTGSYRYMA 263
R IIHRDL NVL G +++ DFG+S K Q++DS+ G+ +MA
Sbjct: 136 KR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-------IGTPYWMA 185
Query: 264 PEVYRRES-----YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS- 317
PEV E+ Y D++S + + EM Q P + ++V + A D L+
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP 245
Query: 318 SLYPEPIKALLRECWHKNPDRRPTFEEII 346
S + + L+ KNP+ RP+ +++
Sbjct: 246 SKWSVEFRDFLKIALDKNPETRPSAAQLL 274
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 13/251 (5%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A K I + NP +E+ + + L HPNIV+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKT-QLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G++ A + I + Y H R I+HR
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHR 138
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + + K+ G+ Y APE+++ + Y G
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSN----EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VDV+S +I++ + G ++ +R R + + LL+ N
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKRFLVLN 252
Query: 336 PDRRPTFEEII 346
P +R T E+I+
Sbjct: 253 PIKRGTLEQIM 263
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V+ V K G +A K I I P +RN ++EL + + P IV F G
Sbjct: 79 GNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 136
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LKK G++ ++ + +G+ YL H I+HRD+
Sbjct: 137 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVK 194
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q DS + G+ YM+PE + Y D++
Sbjct: 195 PSNILVNSRGEIKLCDFGVS--GQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIW 249
Query: 280 SFALIVHEMFQG 291
S L + EM G
Sbjct: 250 SMGLSLVEMAVG 261
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 52 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 111
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 288
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 289 VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 20/267 (7%)
Query: 89 ICKILEDRGGIDPGAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKL 146
I I + R + GA+ EV L + + T+ +A K I S E+ + K+
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKI 73
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
+HPNIV + + L + + + G L D + +KG A + + YLH
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 207 HHRPHAIIHRDLTPSNVLQ---DEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMA 263
I+HRDL P N+L DE + ++DFGLSK+ +D S ++ G+ Y+A
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV-LSTACGTPGYVA 186
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGP----SNRADTAVQVADRRAYEDSRPALSSL 319
PEV ++ Y K+VD +S +I + + G P N A Q+ + YE P +
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL-KAEYEFDSPYWDDI 245
Query: 320 YPEPIKALLRECWHKNPDRRPTFEEII 346
+ K +R K+P++R T E+ +
Sbjct: 246 -SDSAKDFIRHLMEKDPEKRFTCEQAL 271
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V+ V K G +A K I I P +RN ++EL + + P IV F G
Sbjct: 44 GNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 101
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LKK G++ ++ + +G+ YL H I+HRD+
Sbjct: 102 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVK 159
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q DS + G+ YM+PE + Y D++
Sbjct: 160 PSNILVNSRGEIKLCDFGVS--GQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIW 214
Query: 280 SFALIVHEMFQG 291
S L + EM G
Sbjct: 215 SMGLSLVEMAVG 226
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 43/272 (15%)
Query: 102 GAYGEVY------LVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY ++K T +A KT+ S + R+ F+ E + + ++V+
Sbjct: 29 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHVVRL 86
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK--------KKGKLDPPT---AVAYALDIARGMN 203
LGV+ + + + E + +G L L+ G+ PPT + A +IA GM
Sbjct: 87 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIADGMA 145
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRY 261
YL+ + +HR+L N + +K+ DFG+++ E D Y GG G R+
Sbjct: 146 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRW 199
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRP 314
MAPE + + S D++SF +++ E+ +QG + + V D+
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN-- 257
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + L+R CW NP+ RPTF EI+
Sbjct: 258 -----CPERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 20/264 (7%)
Query: 92 ILEDRGGIDPGAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
I + R + GA+ EV L + + T+ +A K I S E+ + K++HP
Sbjct: 19 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHP 76
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHR 209
NIV + + L + + + G L D + +KG A + + YLH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 210 PHAIIHRDLTPSNVLQ---DEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEV 266
I+HRDL P N+L DE + ++DFGLSK+ +D S ++ G+ Y+APEV
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV-LSTACGTPGYVAPEV 189
Query: 267 YRRESYGKSVDVFSFALIVHEMFQGGP----SNRADTAVQVADRRAYEDSRPALSSLYPE 322
++ Y K+VD +S +I + + G P N A Q+ + YE P + +
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL-KAEYEFDSPYWDDI-SD 247
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
K +R K+P++R T E+ +
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQAL 271
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 14/249 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + + + + T+ A K + S+ P R E+ + + L H ++V F G +
Sbjct: 28 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 87
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
++ + + E R SL ++ K++ L P A Y I G YLH +R +IHRDL
Sbjct: 88 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLK 144
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N+ +E +K+ DFGL+ E D K GT +Y +APEV ++ + VDV+
Sbjct: 145 LGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNY--IAPEVLSKKGHSFEVDVW 201
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEPIKA-LLRECWHKNPD 337
S I++ + G P + R + E S P + P+ A L+++ +P
Sbjct: 202 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPT 257
Query: 338 RRPTFEEII 346
RPT E++
Sbjct: 258 ARPTINELL 266
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 49/308 (15%)
Query: 88 VICKILEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK-- 145
I K ++ I G YGEV++ KWRG ++A K ++ + S+ +E ++Q
Sbjct: 34 TIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEA------SWFRETEIYQTVL 87
Query: 146 LRHPNIVQFLGV-LKHS---ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARG 201
+RH NI+ F+ +K + +L +T+Y NGSL+D LK LD + + A G
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSG 146
Query: 202 MNYLH------HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS-KIAQEKDSYSYKMTG 254
+ +LH +P AI HRDL N+L + G + D GL+ K + +
Sbjct: 147 LCHLHTEIFSTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205
Query: 255 GTGSYRYMAPEVYRRESYGKS-------VDVFSFALIVHEMFQGGPSNRADTAVQ----- 302
G+ RYM PEV ES ++ D++SF LI+ E+ + S Q
Sbjct: 206 RVGTKRYMPPEVL-DESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264
Query: 303 -VADRRAYEDSRP--ALSSLYPE------------PIKALLRECWHKNPDRRPTFEEIIF 347
V +YED R + L P + L+ ECW NP R T +
Sbjct: 265 LVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324
Query: 348 RLEAIQES 355
L + ES
Sbjct: 325 TLAKMSES 332
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 14/249 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + + + + T+ A K + S+ P R E+ + + L H ++V F G +
Sbjct: 28 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 87
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
++ + + E R SL ++ K++ L P A Y I G YLH +R +IHRDL
Sbjct: 88 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLK 144
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N+ +E +K+ DFGL+ E D K GT +Y +APEV ++ + VDV+
Sbjct: 145 LGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNY--IAPEVLSKKGHSFEVDVW 201
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEPIKA-LLRECWHKNPD 337
S I++ + G P + R + E S P + P+ A L+++ +P
Sbjct: 202 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPT 257
Query: 338 RRPTFEEII 346
RPT E++
Sbjct: 258 ARPTINELL 266
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A K I + ++ ++ F +E+ + + L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G++ A A I + Y H I+HR
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHR 137
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + ++ K+ G+ Y APE+++ + Y G
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI------KALLR 329
VDV+S +I++ + G ++ +R L Y P + LL+
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRER--------VLRGKYRIPFYMSTDCENLLK 245
Query: 330 ECWHKNPDRRPTFEEII 346
+ NP +R T E+I+
Sbjct: 246 KFLILNPSKRGTLEQIM 262
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 38/307 (12%)
Query: 76 TPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKW------RGTEIAAKTIRSSIASN 129
+P SD F H K + D G G +G+V L + G +A K +++
Sbjct: 3 SPASDPTVF-HKRYLKKIRDLG---EGHFGKVSLYCYDPTNDGTGEMVAVKALKADCG-- 56
Query: 130 PRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS--ERLIFLTEYLRNGSLHDILKKKGKLD 187
P+ R+ + +E+ + + L H +I+++ G + + L + EY+ GSL D L + +
Sbjct: 57 PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IG 115
Query: 188 PPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDS 247
+ +A I GM YLH IHR+L NVL D +K+ DFGL+K E
Sbjct: 116 LAQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 248 YSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRAD--------- 298
Y G + APE + + + DV+SF + ++E+ S+++
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG 232
Query: 299 ------TAVQVAD--RRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLE 350
T +++ + R RP P + L++ CW RPTFE +I L+
Sbjct: 233 IAQGQMTVLRLTELLERGERLPRPDKC---PCEVYHLMKNCWETEASFRPTFENLIPILK 289
Query: 351 AIQESFQ 357
+ E ++
Sbjct: 290 TVHEKYR 296
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 52 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIV 111
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 288
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 289 VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 43/272 (15%)
Query: 102 GAYGEVY------LVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY ++K T +A KT+ S + R+ F+ E + + ++V+
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHVVRL 85
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK--------KKGKLDPPT---AVAYALDIARGMN 203
LGV+ + + + E + +G L L+ G+ PPT + A +IA GM
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIADGMA 144
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRY 261
YL+ + +HR+L N + +K+ DFG+++ E D Y GG G R+
Sbjct: 145 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRW 198
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRP 314
MAPE + + S D++SF +++ E+ +QG + + V D+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN-- 256
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + L+R CW NP+ RPTF EI+
Sbjct: 257 -----CPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V+ V K G +A K I I P +RN ++EL + + P IV F G
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 74
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LKK G++ ++ + +G+ YL H I+HRD+
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q DS + G+ YM+PE + Y D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVS--GQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIW 187
Query: 280 SFALIVHEMFQG 291
S L + EM G
Sbjct: 188 SMGLSLVEMAVG 199
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 43/272 (15%)
Query: 102 GAYGEVY------LVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY ++K T +A KT+ S ++ R R F+ E + + ++V+
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK--------KKGKLDPPT---AVAYALDIARGMN 203
LGV+ + + + E + +G L L+ G+ PPT + A +IA GM
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIADGMA 144
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRY 261
YL+ + +HRDL N + +K+ DFG+++ E D GG G R+
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR---KGGKGLLPVRW 198
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRP 314
MAPE + + S D++SF +++ E+ +QG + + V D+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN-- 256
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + L+R CW NP+ RPTF EI+
Sbjct: 257 -----CPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 54 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 113
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 174 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 290
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 291 VYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V+ V K G +A K I I P +RN ++EL + + P IV F G
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 74
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LKK G++ ++ + +G+ YL H I+HRD+
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q DS + G+ YM+PE + Y D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVS--GQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIW 187
Query: 280 SFALIVHEMFQG 291
S L + EM G
Sbjct: 188 SMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V+ V K G +A K I I P +RN ++EL + + P IV F G
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 74
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LKK G++ ++ + +G+ YL H I+HRD+
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q DS + G+ YM+PE + Y D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVS--GQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIW 187
Query: 280 SFALIVHEMFQG 291
S L + EM G
Sbjct: 188 SMGLSLVEMAVG 199
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V+ V K G +A K I I P +RN ++EL + + P IV F G
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 74
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LKK G++ ++ + +G+ YL H I+HRD+
Sbjct: 75 SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q DS + G+ YM+PE + Y D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVS--GQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIW 187
Query: 280 SFALIVHEMFQG 291
S L + EM G
Sbjct: 188 SMGLSLVEMAVG 199
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 38 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 158 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 274
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 275 VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 14/249 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + + + + T+ A K + S+ P R E+ + + L H ++V F G +
Sbjct: 32 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 91
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
++ + + E R SL ++ K++ L P A Y I G YLH +R +IHRDL
Sbjct: 92 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLK 148
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N+ +E +K+ DFGL+ E D K GT +Y +APEV ++ + VDV+
Sbjct: 149 LGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKTLCGTPNY--IAPEVLSKKGHSFEVDVW 205
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEPIKA-LLRECWHKNPD 337
S I++ + G P + R + E S P + P+ A L+++ +P
Sbjct: 206 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPT 261
Query: 338 RRPTFEEII 346
RPT E++
Sbjct: 262 ARPTINELL 270
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 132/297 (44%), Gaps = 49/297 (16%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK--LRHPNIVQFLG 156
+ G YGEV+ W G +A K S R S+ +E ++ LRH NI+ F+
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSS------RDEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 157 V----LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH------ 206
S +L +T Y +GSL+D L+++ L+P A+ A+ A G+ +LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ-TLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI-AQEKDSYSYKMTGGTGSYRYMAPE 265
+P AI HRD NVL + D GL+ + +Q D G+ RYMAPE
Sbjct: 129 QGKP-AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 266 VYRR-------ESYGKSVDVFSFALIVHEMFQGGPSN------RADTAVQVADRRAYEDS 312
V ESY K D+++F L++ E+ + N R V + ++ED
Sbjct: 188 VLDEQIRTDCFESY-KWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDM 246
Query: 313 RPAL----------SSLYPEPIKA----LLRECWHKNPDRRPTFEEIIFRLEAIQES 355
+ + + L +P+ + ++RECW+ NP R T I L+ I S
Sbjct: 247 KKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 38/307 (12%)
Query: 76 TPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKW------RGTEIAAKTIRSSIASN 129
+P SD F H K + D G G +G+V L + G +A K +++
Sbjct: 3 SPASDPTVF-HKRYLKKIRDLG---EGHFGKVSLYCYDPTNDGTGEMVAVKALKADCG-- 56
Query: 130 PRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS--ERLIFLTEYLRNGSLHDILKKKGKLD 187
P+ R+ + +E+ + + L H +I+++ G + + L + EY+ GSL D L + +
Sbjct: 57 PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IG 115
Query: 188 PPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDS 247
+ +A I GM YLH IHR+L NVL D +K+ DFGL+K E
Sbjct: 116 LAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 248 YSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRAD--------- 298
Y G + APE + + + DV+SF + ++E+ S+++
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG 232
Query: 299 ------TAVQVAD--RRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLE 350
T +++ + R RP P + L++ CW RPTFE +I L+
Sbjct: 233 IAQGQMTVLRLTELLERGERLPRPDKC---PCEVYHLMKNCWETEASFRPTFENLIPILK 289
Query: 351 AIQESFQ 357
+ E ++
Sbjct: 290 TVHEKYR 296
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 20/267 (7%)
Query: 89 ICKILEDRGGIDPGAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKL 146
I I + R + GA+ EV L + + T+ +A K I S E+ + K+
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAVLHKI 73
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
+HPNIV + + L + + + G L D + +KG A + + YLH
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 207 HHRPHAIIHRDLTPSNVLQ---DEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMA 263
I+HRDL P N+L DE + ++DFGLSK+ +D S ++ G+ Y+A
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV-LSTACGTPGYVA 186
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGP----SNRADTAVQVADRRAYEDSRPALSSL 319
PEV ++ Y K+VD +S +I + + G P N A Q+ + YE P +
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL-KAEYEFDSPYWDDI 245
Query: 320 YPEPIKALLRECWHKNPDRRPTFEEII 346
+ K +R K+P++R T E+ +
Sbjct: 246 -SDSAKDFIRHLMEKDPEKRFTCEQAL 271
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 44 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 103
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 164 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 280
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 281 VYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 91 KILEDRGGIDPGAYGEVYLVK-WRGTEIAA--KTIRSSIASNPRVRNSFMKELGLWQKLR 147
K+ D I G++G VY + R +E+ A K S SN + ++ +KE+ QKLR
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQKLR 112
Query: 148 HPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLH 206
HPN +Q+ G + EY GS D+L+ K L A +G+ YLH
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEV 266
H +IHRD+ N+L E G +K+ DFG + I + + G+ +MAPEV
Sbjct: 172 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-------VGTPYWMAPEV 221
Query: 267 ---YRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
Y VDV+S + E+ + P A+ A +S S + E
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 281
Query: 324 IKALLRECWHKNPDRRPTFEEII 346
+ + C K P RPT E ++
Sbjct: 282 FRNFVDSCLQKIPQDRPTSEVLL 304
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 36/285 (12%)
Query: 102 GAYGEVYLVKW------RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
G +G+V L + G +A K +++ + P+ R+ + +E+ + + L H +I+++
Sbjct: 42 GHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYK 99
Query: 156 GVLKHS--ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
G + + L + EY+ GSL D L + + + +A I GM YLH
Sbjct: 100 GCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQH---Y 155
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKIAQE-KDSYSYKMTGGTGSYRYMAPEVYRRESY 272
IHRDL NVL D +K+ DFGL+K E + Y + G + + Y APE + +
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKF 214
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRAD---------------TAVQVAD--RRAYEDSRPA 315
+ DV+SF + ++E+ S+++ T +++ + R RP
Sbjct: 215 YYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPD 274
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKT 360
P + L++ CW RPTFE +I L+ + E +Q +
Sbjct: 275 KC---PAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQA 316
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 102 GAYGEVYLVKWRGT-------EIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G ++A K ++S+ ++ + + M EL + L +H NIV
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHENIVN 114
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKK----------------GKLDPPTAVAYALD 197
LG H ++ +TEY G L + L++K +L + ++
Sbjct: 115 LLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQ 174
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
+A+GM +L IHRD+ NVL K+ DFGL++ +Y K
Sbjct: 175 VAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL- 230
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADRRAYEDSR 313
++MAPE Y DV+S+ +++ E+F G P ++ + Y+ ++
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ 290
Query: 314 PALSSLYPEPIKALLRECWHKNPDRRPTFEEII-FRLEAIQE 354
PA + P+ I ++++ CW P RPTF++I F E QE
Sbjct: 291 PAFA---PKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 329
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 91 KILEDRGGIDPGAYGEVYLVK-WRGTEIAA--KTIRSSIASNPRVRNSFMKELGLWQKLR 147
K+ D I G++G VY + R +E+ A K S SN + ++ +KE+ QKLR
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQKLR 73
Query: 148 HPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLH 206
HPN +Q+ G + EY GS D+L+ K L A +G+ YLH
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEV 266
H +IHRD+ N+L E G +K+ DFG + I + + G+ +MAPEV
Sbjct: 133 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-------VGTPYWMAPEV 182
Query: 267 ---YRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
Y VDV+S + E+ + P A+ A +S S + E
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 242
Query: 324 IKALLRECWHKNPDRRPTFEEII 346
+ + C K P RPT E ++
Sbjct: 243 FRNFVDSCLQKIPQDRPTSEVLL 265
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A + I + ++ ++ F +E+ + + L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G++ A A I + Y H I+HR
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHR 137
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + ++ K+ GS Y APE+++ + Y G
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI------KALLR 329
VDV+S +I++ + G ++ +R L Y P + LL+
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRER--------VLRGKYRIPFYMSTDCENLLK 245
Query: 330 ECWHKNPDRRPTFEEII 346
+ NP +R T E+I+
Sbjct: 246 KFLILNPSKRGTLEQIM 262
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 99 IDPGAYGEVYL-VKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G++GEV+ + R ++ A I + +E+ + + + ++ G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+L + EYL GS D+L+ G D +I +G++YLH + IHRD
Sbjct: 90 YLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKK---IHRD 145
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
+ +NVL E G +K+ DFG +A + K G+ +MAPEV ++ +Y D
Sbjct: 146 IKAANVLLSEQGDVKLADFG---VAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKAD 202
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
++S + E+ +G P N ++V +++ P L + + K + C +K+P
Sbjct: 203 IWSLGITAIELAKGEPPNSDMHPMRVL-FLIPKNNPPTLVGDFTKSFKEFIDACLNKDPS 261
Query: 338 RRPTFEEII 346
RPT +E++
Sbjct: 262 FRPTAKELL 270
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 64 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ SY GG ++M
Sbjct: 184 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 300
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 301 VYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A + I + ++ ++ F +E+ + + L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G++ A A I + Y H I+HR
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KFIVHR 137
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + ++ K+ GS Y APE+++ + Y G
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDEFCGSPPYAAPELFQGKKYDGPE 193
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI------KALLR 329
VDV+S +I++ + G ++ +R L Y P + LL+
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRER--------VLRGKYRIPFYMSTDCENLLK 245
Query: 330 ECWHKNPDRRPTFEEII 346
+ NP +R T E+I+
Sbjct: 246 KFLILNPSKRGTLEQIM 262
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 16/258 (6%)
Query: 92 ILEDRGGIDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
IL D G+ G +G+V + K G ++A K + + V +E+ + RHP
Sbjct: 19 ILGDTLGV--GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHR 209
+I++ V+ + + EY+ G L D + K G+LD + I G++Y H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR-- 134
Query: 210 PHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
H ++HRDL P NVL D + K+ DFGLS + + + + GS Y APEV
Sbjct: 135 -HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRXSCGSPNYAAPEVISG 189
Query: 270 ESY-GKSVDVFSFALIVHEMFQGG-PSNRADTAVQVADRRAYEDSRPALSSLYPEPIKAL 327
Y G VD++S +I++ + G P + D V ++ + L P I +L
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFD--DDHVPTLFKKICDGIFYTPQYLNPSVI-SL 246
Query: 328 LRECWHKNPDRRPTFEEI 345
L+ +P +R T ++I
Sbjct: 247 LKHMLQVDPMKRATIKDI 264
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 43/272 (15%)
Query: 102 GAYGEVY------LVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY ++K T +A KT+ S ++ R R F+ E + + ++V+
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK--------KKGKLDPPT---AVAYALDIARGMN 203
LGV+ + + + E + +G L L+ G+ PPT + A +IA GM
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIADGMA 144
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRY 261
YL+ + +HRDL N + +K+ DFG+++ E D GG G R+
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR---KGGKGLLPVRW 198
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRP 314
MAPE + + S D++SF +++ E+ +QG + + V D+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN-- 256
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + L+R CW NP RPTF EI+
Sbjct: 257 -----CPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 43/272 (15%)
Query: 102 GAYGEVY------LVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY ++K T +A KT+ S ++ R R F+ E + + ++V+
Sbjct: 25 GSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHVVRL 82
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK--------KKGKLDPPT---AVAYALDIARGMN 203
LGV+ + + + E + +G L L+ G+ PPT + A +IA GM
Sbjct: 83 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIADGMA 141
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRY 261
YL+ + +HRDL N + +K+ DFG+++ E D GG G R+
Sbjct: 142 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR---KGGKGLLPVRW 195
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRP 314
MAPE + + S D++SF +++ E+ +QG + + V D+
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN-- 253
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + L+R CW NP RPTF EI+
Sbjct: 254 -----CPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 19/272 (6%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LV+ + T A K +R + + E + Q RHP + +
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+RL F+ EY G L L ++ A Y +I + YLH +++RD+
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N++ D+ GH+K+TDFGL K E S M G+ Y+APEV YG++VD +
Sbjct: 133 LENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNP--- 336
++++EM G ++ + E+ R +L PE K+LL K+P
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEA-KSLLAGLLKKDPKQR 247
Query: 337 ------DRRPTFEEIIFRLEAIQESFQKKTVP 362
D + E F Q+ QKK +P
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 117/280 (41%), Gaps = 26/280 (9%)
Query: 63 KGADVNSLDRWGRTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYL--VKWRGTEIAAK 120
G VNS +R G R G G++G+V L VK G A K
Sbjct: 10 NGIGVNSSNRLGIDNFEFIRVLGK---------------GSFGKVMLARVKETGDLYAVK 54
Query: 121 TIRSS-IASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDI 179
++ I + V + ++ L HP + Q + +RL F+ E++ G L
Sbjct: 55 VLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFH 114
Query: 180 LKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS 239
++K + D A YA +I + +LH II+RDL NVL D GH K+ DFG+
Sbjct: 115 IQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMC 171
Query: 240 KIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADT 299
K E G+ Y+APE+ + YG +VD ++ ++++EM G A+
Sbjct: 172 K---EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
Query: 300 AVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
+ + A + + E +L+ KNP R
Sbjct: 229 EDDLFE--AILNDEVVYPTWLHEDATGILKSFMTKNPTMR 266
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 19/272 (6%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LV+ + T A K +R + + E + Q RHP + +
Sbjct: 21 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 80
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+RL F+ EY G L L ++ A Y +I + YLH +++RD+
Sbjct: 81 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIK 137
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N++ D+ GH+K+TDFGL K E S M G+ Y+APEV YG++VD +
Sbjct: 138 LENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 194
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNP--- 336
++++EM G ++ + E+ R +L PE K+LL K+P
Sbjct: 195 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEA-KSLLAGLLKKDPKQR 252
Query: 337 ------DRRPTFEEIIFRLEAIQESFQKKTVP 362
D + E F Q+ QKK +P
Sbjct: 253 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 284
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 19/272 (6%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LV+ + T A K +R + + E + Q RHP + +
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+RL F+ EY G L L ++ A Y +I + YLH +++RD+
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N++ D+ GH+K+TDFGL K E S M G+ Y+APEV YG++VD +
Sbjct: 133 LENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNP--- 336
++++EM G ++ + E+ R +L PE K+LL K+P
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEA-KSLLAGLLKKDPKQR 247
Query: 337 ------DRRPTFEEIIFRLEAIQESFQKKTVP 362
D + E F Q+ QKK +P
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 13/251 (5%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A K I + ++ ++ F +E+ + + L HPNIV+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 73
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G + A A I + Y H I+HR
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ---KFIVHR 130
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + ++ K+ GS Y APE+++ + Y G
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 186
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
VDV+S +I++ + G ++ +R R + + LL++ N
Sbjct: 187 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKKFLILN 244
Query: 336 PDRRPTFEEII 346
P +R T E+I+
Sbjct: 245 PSKRGTLEQIM 255
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 19/272 (6%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LV+ + T A K +R + + E + Q RHP + +
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+RL F+ EY G L L ++ A Y +I + YLH +++RD+
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N++ D+ GH+K+TDFGL K E S M G+ Y+APEV YG++VD +
Sbjct: 133 LENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNP--- 336
++++EM G ++ + E+ R +L PE K+LL K+P
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEA-KSLLAGLLKKDPKQR 247
Query: 337 ------DRRPTFEEIIFRLEAIQESFQKKTVP 362
D + E F Q+ QKK +P
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 38/281 (13%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
GA+G+V+L + +A K ++ + R F +E L L+H +IV+F
Sbjct: 26 GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELLTNLQHEHIVKF 82
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK----------------KKGKLDPPTAVAYALDI 198
GV + LI + EY+++G L+ L+ KG+L + A I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 199 ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG- 257
A GM YL +HRDL N L +K+ DFG+S+ D Y++ G T
Sbjct: 143 ASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD--YYRVGGHTML 197
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS---NRADTAVQVADRRAYEDSRP 314
R+M PE + DV+SF +I+ E+F G ++T V + RP
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP 257
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRLEAIQES 355
+ P+ + ++ CW + P +R +EI L A+ ++
Sbjct: 258 RVC---PKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LV+ + T A K +R + + E + Q RHP + +
Sbjct: 19 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 78
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+RL F+ EY G L L ++ A Y +I + YLH +++RD+
Sbjct: 79 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIK 135
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N++ D+ GH+K+TDFGL K E S M G+ Y+APEV YG++VD +
Sbjct: 136 LENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 192
Query: 280 SFALIVHEMFQG 291
++++EM G
Sbjct: 193 GLGVVMYEMMCG 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 19/272 (6%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LV+ + T A K +R + + E + Q RHP + +
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+RL F+ EY G L L ++ A Y +I + YLH +++RD+
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N++ D+ GH+K+TDFGL K E S M G+ Y+APEV YG++VD +
Sbjct: 133 LENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNP--- 336
++++EM G ++ + E+ R +L PE K+LL K+P
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEA-KSLLAGLLKKDPKQR 247
Query: 337 ------DRRPTFEEIIFRLEAIQESFQKKTVP 362
D + E F Q+ QKK +P
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 19/272 (6%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G+V LV+ + T A K +R + + E + Q RHP + +
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+RL F+ EY G L L ++ A Y +I + YLH +++RD+
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIK 132
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N++ D+ GH+K+TDFGL K E S M G+ Y+APEV YG++VD +
Sbjct: 133 LENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNP--- 336
++++EM G ++ + E+ R +L PE K+LL K+P
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEA-KSLLAGLLKKDPKQR 247
Query: 337 ------DRRPTFEEIIFRLEAIQESFQKKTVP 362
D + E F Q+ QKK +P
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 43/272 (15%)
Query: 102 GAYGEVY------LVKWRG-TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
G++G VY ++K T +A KT+ S ++ R R F+ E + + ++V+
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILK--------KKGKLDPPT---AVAYALDIARGMN 203
LGV+ + + + E + +G L L+ G+ PPT + A +IA GM
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIADGMA 144
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRY 261
YL+ + +HRDL N + +K+ DFG+++ E +Y GG G R+
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET---AYYRKGGKGLLPVRW 198
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEM-------FQGGPSNRADTAVQVADRRAYEDSRP 314
MAPE + + S D++SF +++ E+ +QG + + V D+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN-- 256
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + L+R CW NP RPTF EI+
Sbjct: 257 -----CPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 55 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ Y GG ++M
Sbjct: 175 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 291
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 292 VYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 14/250 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
GA GEV L R TE A + + KE+ + + L H N+V+F G +
Sbjct: 17 GAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPS 221
EY G L D ++ + P A + + G+ YLH I HRD+ P
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPE 133
Query: 222 NVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYGKSVDVFS 280
N+L DE +LK++DFGL+ + + + + G+ Y+APE+ RRE + + VDV+S
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 281 FALIVHEMFQG-----GPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKN 335
+++ M G PS+ +++ Y + + S P+ ALL + +N
Sbjct: 193 CGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---APL-ALLHKILVEN 248
Query: 336 PDRRPTFEEI 345
P R T +I
Sbjct: 249 PSARITIPDI 258
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 130/257 (50%), Gaps = 17/257 (6%)
Query: 105 GEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH--SE 162
GE++ +W+G +I K ++ S + R+ F +E + HPN++ LG + +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRD-FNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 163 RLIFLTEYLRNGSLHDILKKKGK--LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTP 220
+T ++ GSL+++L + +D AV +ALD+ARGM +LH P L P
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEP-------LIP 135
Query: 221 SNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR---ESYGKSVD 277
+ L + + + + ++I+ +S++ G + ++APE ++ ++ +S D
Sbjct: 136 RHALNSRS--VMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSAD 193
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
++SFA+++ E+ + +++ + A E RP + + L++ C +++P
Sbjct: 194 MWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPA 253
Query: 338 RRPTFEEIIFRLEAIQE 354
+RP F+ I+ LE +Q+
Sbjct: 254 KRPKFDMIVPILEKMQD 270
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 39/270 (14%)
Query: 102 GAYGEVYLVKWRG-------TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF 154
GA+G+V+L + +A KT++ + + R F +E L L+H +IV+F
Sbjct: 24 GAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKF 80
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILKKKG-------KLDPPTAVA------YALDIARG 201
GV + LI + EY+++G L+ L+ G + +PPT + A IA G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 202 MNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG-SYR 260
M YL +HRDL N L E +K+ DFG+S+ D Y++ G T R
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD--YYRVGGHTMLPIR 195
Query: 261 YMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS-----NRADTAVQVADRRAYEDSRPA 315
+M PE + DV+S +++ E+F G + + + R + R
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC 255
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEI 345
P+ + L+ CW + P R + I
Sbjct: 256 -----PQEVYELMLGCWQREPHMRKNIKGI 280
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 22/251 (8%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + EVY G +A K ++ + + R +KE+ L ++L HPN++++
Sbjct: 43 GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI 102
Query: 160 HSERLIFLTEYLRNGSLHDILK---KKGKLDPPTAV-AYALDIARGMNYLHHHRPHAIIH 215
L + E G L ++K K+ +L P V Y + + + ++H R ++H
Sbjct: 103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMH 159
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RD+ P+NV G +K+ D GL + K + ++ + G+ YM+PE Y
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL---VGTPYYMSPERIHENGYNFK 216
Query: 276 VDVFSFALIVHEM------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLR 329
D++S +++EM F G N ++ D P S Y E ++ L+
Sbjct: 217 SDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC----DYPPLPSDHYSEELRQLVN 272
Query: 330 ECWHKNPDRRP 340
C + +P++RP
Sbjct: 273 MCINPDPEKRP 283
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 17/267 (6%)
Query: 98 GIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNS-----FMKELGLWQKLRHPNIV 152
G+ GA+GEVY + G ++ ++ + P V + F+ E + K H NIV
Sbjct: 78 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAY------ALDIARGMNYL 205
+ +GV S L E + G L L++ + + P+++A A DIA G YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG--SYRYMA 263
+ IHRD+ N L G +V G +A++ Y GG ++M
Sbjct: 198 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP 323
PE + + D +SF +++ E+F G + Q R P P
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP 314
Query: 324 IKALLRECWHKNPDRRPTFEEIIFRLE 350
+ ++ +CW P+ RP F I+ R+E
Sbjct: 315 VYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + + Y + T+ A K + S+ P + E+ + + L +P++V F G +
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ + + E R SL ++ K++ + P A + +G+ YLH++R +IHRDL
Sbjct: 113 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
N+ ++ +K+ DFGL +KI E D K GT +Y +APEV ++ + VD+
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNY--IAPEVLCKKGHSFEVDI 225
Query: 279 FSFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEPI-KALLRECWHKNP 336
+S I++ + G P + R + E S P + P+ AL+R H +P
Sbjct: 226 WSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADP 281
Query: 337 DRRPTFEEIIFRLEAIQESFQKKTVPSCC 365
RP+ E++ E + +P+ C
Sbjct: 282 TLRPSVAELLTD-EFFTSGYAPMRLPTSC 309
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 15/251 (5%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A K I + ++ ++ F +E+ + + L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNHPNIVKLFE 80
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G+ A A I + Y H I+HR
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ---KFIVHR 137
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + ++ K+ G+ Y APE+++ + Y G
Sbjct: 138 DLKAENLLLDADXNIKIADFGFSN----EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSR-PALSSLYPEPIKALLRECWHK 334
VDV+S +I++ + G ++ +R R P S E LL++
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCE---NLLKKFLIL 250
Query: 335 NPDRRPTFEEI 345
NP +R T E+I
Sbjct: 251 NPSKRGTLEQI 261
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + + Y + T+ A K + S+ P + E+ + + L +P++V F G +
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ + + E R SL ++ K++ + P A + +G+ YLH++R +IHRDL
Sbjct: 113 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
N+ ++ +K+ DFGL +KI E D K GT +Y +APEV ++ + VD+
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKI--EFDGERKKTLCGTPNY--IAPEVLCKKGHSFEVDI 225
Query: 279 FSFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEPI-KALLRECWHKNP 336
+S I++ + G P + R + E S P + P+ AL+R H +P
Sbjct: 226 WSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADP 281
Query: 337 DRRPTFEEIIFRLEAIQESFQKKTVPSCC 365
RP+ E++ E + +P+ C
Sbjct: 282 TLRPSVAELLTD-EFFTSGYAPMRLPTSC 309
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 86
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA----------------YAL 196
LG K L+ +TE+ + G+L L+ K P VA Y+
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT 256
+A+GM +L + IHRDL N+L E +K+ DFGL++ KD +
Sbjct: 147 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDAR 202
Query: 257 GSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP- 314
++MAPE Y DV+SF +++ E+F G S + + RR E +R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
A PE + +L +CWH P +RPTF E++
Sbjct: 263 APDYTTPEMYQTML-DCWHGEPSQRPTFSELV 293
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 86
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA----------------YAL 196
LG K L+ +TE+ + G+L L+ K P VA Y+
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT 256
+A+GM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 147 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 257 GSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP- 314
++MAPE Y DV+SF +++ E+F G S + + RR E +R
Sbjct: 204 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
A PE + +L +CWH P +RPTF E++
Sbjct: 263 APDYTTPEMYQTML-DCWHGEPSQRPTFSELV 293
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 39 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 97
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 98 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 154
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++Y T G ++ APE + DV+SF +++ E F G
Sbjct: 155 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 214
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 215 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 262
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 45 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 103
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 104 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 160
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++Y T G ++ APE + DV+SF +++ E F G
Sbjct: 161 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 221 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 13/249 (5%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++ VY + G E+A K I + E+ + +L+HP+I++ +
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE 81
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGK-LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
S + + E NG ++ LK + K A + I GM YLH H I+HRDL
Sbjct: 82 DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDL 138
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
T SN+L ++K+ DFGL+ + Y + G+ Y++PE+ R ++G DV
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL---CGTPNYISPEIATRSAHGLESDV 195
Query: 279 FSFALIVHEMFQGGPSNRADTAVQVADRRAYED-SRPALSSLYPEPIKALLRECWHKNPD 337
+S + + + G P DT ++ D P+ S+ K L+ + +NP
Sbjct: 196 WSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSI---EAKDLIHQLLRRNPA 252
Query: 338 RRPTFEEII 346
R + ++
Sbjct: 253 DRLSLSSVL 261
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 86
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA----------------YAL 196
LG K L+ +TE+ + G+L L+ K P VA Y+
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT 256
+A+GM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 147 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 257 GSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP- 314
++MAPE Y DV+SF +++ E+F G S + + RR E +R
Sbjct: 204 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
A PE + +L +CWH P +RPTF E++
Sbjct: 263 APDYTTPEMYQTML-DCWHGEPSQRPTFSELV 293
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 41 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 99
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 100 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 156
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++Y T G ++ APE + DV+SF +++ E F G
Sbjct: 157 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 216
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 217 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 51 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 109
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 110 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 166
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++Y T G ++ APE + DV+SF +++ E F G
Sbjct: 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 226
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 227 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 274
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 59 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 117
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 118 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 174
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++Y T G ++ APE + DV+SF +++ E F G
Sbjct: 175 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 234
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 235 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 282
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 119
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 120 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 176
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++Y T G ++ APE + DV+SF +++ E F G
Sbjct: 177 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 237 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 119
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 120 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 176
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++Y T G ++ APE + DV+SF +++ E F G
Sbjct: 177 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 237 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + + Y + T+ A K + S+ P + E+ + + L +P++V F G +
Sbjct: 37 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 96
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ + + E R SL ++ K++ + P A + +G+ YLH++R +IHRDL
Sbjct: 97 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLK 153
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
N+ ++ +K+ DFGL+ E D K GT +Y +APEV ++ + VD++
Sbjct: 154 LGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKDLCGTPNY--IAPEVLCKKGHSFEVDIW 210
Query: 280 SFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEPI-KALLRECWHKNPD 337
S I++ + G P + R + E S P + P+ AL+R H +P
Sbjct: 211 SLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPT 266
Query: 338 RRPTFEEIIFRLEAIQESFQKKTVPSCC 365
RP+ E++ E + +P+ C
Sbjct: 267 LRPSVAELLTD-EFFTSGYAPMRLPTSC 293
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 99 IDPGAYGEVYL---VKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR---HPNIV 152
I GAYG+V+ +K G +A K +R + S ++E+ + + L HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVV 77
Query: 153 QFLGVLKHSE-----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYL 205
+ V S +L + E++ + L L K + PT + RG+++L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM--TGGTGSYRYMA 263
H HR ++HRDL P N+L +G +K+ DFGL++I YS++M T + Y A
Sbjct: 137 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI------YSFQMALTSVVVTLWYRA 187
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
PEV + SY VD++S I EMF+ P R + V
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 99 IDPGAYGEVYL---VKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR---HPNIV 152
I GAYG+V+ +K G +A K +R + S ++E+ + + L HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVV 77
Query: 153 QFLGVLKHSE-----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYL 205
+ V S +L + E++ + L L K + PT + RG+++L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM--TGGTGSYRYMA 263
H HR ++HRDL P N+L +G +K+ DFGL++I YS++M T + Y A
Sbjct: 137 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI------YSFQMALTSVVVTLWYRA 187
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
PEV + SY VD++S I EMF+ P R + V
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G + + Y + T+ A K + S+ P + E+ + + L +P++V F G +
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ + + E R SL ++ K++ + P A + +G+ YLH++R +IHRDL
Sbjct: 113 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLK 169
Query: 220 PSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
N+ ++ +K+ DFGL +KI E D K GT +Y +APEV ++ + VD+
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNY--IAPEVLCKKGHSFEVDI 225
Query: 279 FSFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEPI-KALLRECWHKNP 336
+S I++ + G P + R + E S P + P+ AL+R H +P
Sbjct: 226 WSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADP 281
Query: 337 DRRPTFEEIIFRLEAIQESFQKKTVPSCC 365
RP+ E++ E + +P+ C
Sbjct: 282 TLRPSVAELLTD-EFFTSGYAPMRLPTSC 309
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 47/289 (16%)
Query: 94 EDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNI 151
E G I G+YG V+ + R G +A K S +P ++ ++E+ + ++L+HPN+
Sbjct: 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES-EDDPVIKKIALREIRMLKQLKHPNL 64
Query: 152 VQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPH 211
V L V + RL + EY + LH++ + + + + + +N+ H H
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN-- 122
Query: 212 AIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES 271
IHRD+ P N+L + +K+ DFG +++ Y Y T YR +PE+ ++
Sbjct: 123 -CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY-YDDEVATRWYR--SPELLVGDT 178
Query: 272 -YGKSVDVFSFALIVHEMFQGGP------------------------------SNRADTA 300
YG VDV++ + E+ G P +N+ +
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238
Query: 301 VQVADRRAYEDSRPALSSLYPE---PIKALLRECWHKNPDRRPTFEEII 346
V++ D ED P L +P P LL+ C H +P R T E+++
Sbjct: 239 VKIPDP---EDMEP-LELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 99 IDPGAYGEVYL---VKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR---HPNIV 152
I GAYG+V+ +K G +A K +R + S ++E+ + + L HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVV 77
Query: 153 QFLGVLKHSE-----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYL 205
+ V S +L + E++ + L L K + PT + RG+++L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM--TGGTGSYRYMA 263
H HR ++HRDL P N+L +G +K+ DFGL++I YS++M T + Y A
Sbjct: 137 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI------YSFQMALTSVVVTLWYRA 187
Query: 264 PEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
PEV + SY VD++S I EMF+ P R + V
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 404 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 462
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 463 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 519
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++Y T G ++ APE + DV+SF +++ E F G
Sbjct: 520 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 579
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 580 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 627
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 403 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 461
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 462 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 518
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++Y T G ++ APE + DV+SF +++ E F G
Sbjct: 519 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 578
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 579 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 626
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 99 IDPGAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G + +V L + G E+A K I + NP +E+ + + L HPNIV+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKT-QLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V++ + L + EY G + D L G++ A A I + Y H I+HR
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KYIVHR 138
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-GKS 275
DL N+L D ++K+ DFG S + + K+ GS Y APE+++ + Y G
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFSN----EFTVGNKLDTFCGSPPYAAPELFQGKKYDGPE 194
Query: 276 VDVFSFALIVHEMFQG 291
VDV+S +I++ + G
Sbjct: 195 VDVWSLGVILYTLVSG 210
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 118/250 (47%), Gaps = 17/250 (6%)
Query: 102 GAYGEVY--LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G+YG VY + K G +A K + + S+ +KE+ + Q+ P++V++ G
Sbjct: 40 GSYGSVYKAIHKETGQIVAIKQV--PVESD---LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALD-IARGMNYLHHHRPHAIIHRDL 218
+ L + EY GS+ DI++ + K +A L +G+ YLH R IHRD+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDI 151
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDV 278
N+L + GH K+ DFG++ Q D + K G+ +MAPEV + Y D+
Sbjct: 152 KAGNILLNTEGHAKLADFGVA--GQLTDXMA-KRNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 279 FSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPAL--SSLYPEPIKALLRECWHKNP 336
+S + EM +G P AD A + P L+ + +++C K+P
Sbjct: 209 WSLGITAIEMAEGKPP-YADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSP 267
Query: 337 DRRPTFEEII 346
++R T +++
Sbjct: 268 EQRATATQLL 277
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 20/267 (7%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G +G+VY +W G E+A + I + +++ +F +E+ +++ RH N+V F+G
Sbjct: 41 IGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLK-AFKREVMAYRQTRHENVVLFMGAC 98
Query: 159 KHSERLIFLTEYLRNGSLHDILK-KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
L +T + +L+ +++ K LD A +I +GM YLH I+H+D
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKD 155
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQ--EKDSYSYKMTGGTGSYRYMAPEVYRRES---- 271
L NV D G + +TDFGL I+ + K+ G ++APE+ R+ S
Sbjct: 156 LKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 272 -----YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSL-YPEPIK 325
+ K DVF+ I +E+ + A + + +P LS + + I
Sbjct: 215 EDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG-TGMKPNLSQIGMGKEIS 273
Query: 326 ALLRECWHKNPDRRPTFEEIIFRLEAI 352
+L CW + RPTF +++ LE +
Sbjct: 274 DILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 7/255 (2%)
Query: 107 VYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIF 166
VY ++ + ++A K ++ + M+E + +L +P IV+ +GV + +E L+
Sbjct: 30 VYRMRKKQIDVAIKVLKQ--GTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALML 86
Query: 167 LTEYLRNGSLHDILKKKGKLDPPTAVAYAL-DIARGMNYLHHHRPHAIIHRDLTPSNVLQ 225
+ E G LH L K + P + VA L ++ GM YL +HRDL NVL
Sbjct: 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLL 143
Query: 226 DEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIV 285
+ K++DFGLSK DSY + G ++ APE + DV+S+ + +
Sbjct: 144 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 203
Query: 286 HEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEI 345
E G + R P + AL+ +CW + RP F +
Sbjct: 204 WEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTV 263
Query: 346 IFRLEAIQESFQKKT 360
R+ A S K
Sbjct: 264 EQRMRACYYSLASKV 278
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 34/272 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 95
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA----------------YAL 196
LG K L+ + E+ + G+L L+ K P VA Y+
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT 256
+A+GM +L + IHRDL N+L E +K+ DFGL++ KD +
Sbjct: 156 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDAR 211
Query: 257 GSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP- 314
++MAPE Y DV+SF +++ E+F G S + + RR E +R
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
A PE + +L +CWH P +RPTF E++
Sbjct: 272 APDYTTPEMYQTML-DCWHGEPSQRPTFSELV 302
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 34/272 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 75 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 132
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA----------------YAL 196
LG K L+ + E+ + G+L L+ K P VA Y+
Sbjct: 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 192
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT 256
+A+GM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 193 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 257 GSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP- 314
++MAPE Y DV+SF +++ E+F G S + + RR E +R
Sbjct: 250 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 308
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
A PE + +L +CWH P +RPTF E++
Sbjct: 309 APDYTTPEMYQTML-DCWHGEPSQRPTFSELV 339
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 15/212 (7%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPR--VRNSFMKELGLWQKLRHPNIVQFLGV 157
G + VY + + T +A K I+ S + + + ++E+ L Q+L HPNI+ L
Sbjct: 21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA 80
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV-AYALDIARGMNYLHHHRPHAIIHR 216
H + + +++ L I+K + P+ + AY L +G+ YLH H I+HR
Sbjct: 81 FGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHR 136
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPE-VYRRESYGK 274
DL P+N+L DE G LK+ DFGL+K +Y +++ + Y APE ++ YG
Sbjct: 137 DLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV----TRWYRAPELLFGARMYGV 192
Query: 275 SVDVFSFALIVHEMFQGGPSNRADTAVQVADR 306
VD+++ I+ E+ P D+ + R
Sbjct: 193 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTR 224
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 34/272 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 86
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA----------------YAL 196
LG K L+ + E+ + G+L L+ K P VA Y+
Sbjct: 87 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT 256
+A+GM +L + IHRDL N+L E +K+ DFGL++ KD +
Sbjct: 147 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDAR 202
Query: 257 GSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP- 314
++MAPE Y DV+SF +++ E+F G S + + RR E +R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
A PE + +L +CWH P +RPTF E++
Sbjct: 263 APDYTTPEMYQTML-DCWHGEPSQRPTFSELV 293
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 34/272 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 95
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA----------------YAL 196
LG K L+ + E+ + G+L L+ K P VA Y+
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT 256
+A+GM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 156 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDAR 211
Query: 257 GSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP- 314
++MAPE Y DV+SF +++ E+F G S + + RR E +R
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
A PE + +L +CWH P +RPTF E++
Sbjct: 272 APDYTTPEMYQTML-DCWHGEPSQRPTFSELV 302
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 34/272 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 95
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA----------------YAL 196
LG K L+ + E+ + G+L L+ K P VA Y+
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT 256
+A+GM +L + IHRDL N+L E +K+ DFGL++ KD +
Sbjct: 156 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDXVRKGDAR 211
Query: 257 GSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP- 314
++MAPE Y DV+SF +++ E+F G S + + RR E +R
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
A PE + +L +CWH P +RPTF E++
Sbjct: 272 APDYTTPEMYQTML-DCWHGEPSQRPTFSELV 302
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 43/306 (14%)
Query: 75 RTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKW-RGTEIAAKTIRSSIASNPRVR 133
R LS ++ G K++E AYG L+K +A K ++ S ++ R
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEAT------AYG---LIKSDAAMTVAVKMLKPS--AHLTER 70
Query: 134 NSFMKELGLWQKL-RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKK------GKL 186
+ M EL + L H NIV LG + +TEY G L + L++K K
Sbjct: 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 130
Query: 187 DPPT------------AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVT 234
P ++++ +A+GM +L IHRDL N+L K+
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKIC 187
Query: 235 DFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS 294
DFGL++ + +Y K ++MAPE Y DV+S+ + + E+F G S
Sbjct: 188 DFGLARDIKNDSNYVVK-GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246
Query: 295 NRADTAVQVADRRAYEDSRPALSSLYPEPIKA----LLRECWHKNPDRRPTFEEIIFRLE 350
V D + Y+ + L PE A +++ CW +P +RPTF++I+ +E
Sbjct: 247 PYPGMPV---DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
Query: 351 -AIQES 355
I ES
Sbjct: 304 KQISES 309
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 43/306 (14%)
Query: 75 RTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKW-RGTEIAAKTIRSSIASNPRVR 133
R LS ++ G K++E AYG L+K +A K ++ S ++ R
Sbjct: 38 RNRLSFGKTLGAGAFGKVVEAT------AYG---LIKSDAAMTVAVKMLKPS--AHLTER 86
Query: 134 NSFMKELGLWQKL-RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKK------GKL 186
+ M EL + L H NIV LG + +TEY G L + L++K K
Sbjct: 87 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 146
Query: 187 DPPT------------AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVT 234
P ++++ +A+GM +L IHRDL N+L K+
Sbjct: 147 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKIC 203
Query: 235 DFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS 294
DFGL++ + +Y K ++MAPE Y DV+S+ + + E+F G S
Sbjct: 204 DFGLARDIKNDSNYVVK-GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 262
Query: 295 NRADTAVQVADRRAYEDSRPALSSLYPEPIKA----LLRECWHKNPDRRPTFEEIIFRLE 350
V D + Y+ + L PE A +++ CW +P +RPTF++I+ +E
Sbjct: 263 PYPGMPV---DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
Query: 351 -AIQES 355
I ES
Sbjct: 320 KQISES 325
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 30/265 (11%)
Query: 97 GGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
G + GA+G+VY + + T + A S + + +M E+ + HPNIV+ L
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASCDHPNIVKLLD 101
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIAR----GMNYLHHHRPHA 212
+ L L E+ G++ ++ + L+ P + + + +NYLH ++
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDNK--- 155
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLS----KIAQEKDSYSYKMTGGTGSYRYMAPEVYR 268
IIHRDL N+L G +K+ DFG+S + Q +DS+ G+ +MAPEV
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF-------IGTPYWMAPEVVM 208
Query: 269 RES-----YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS--SLYP 321
E+ Y DV+S + + EM + P + ++V + A + P L+ S +
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP-PTLAQPSRWS 267
Query: 322 EPIKALLRECWHKNPDRRPTFEEII 346
K L++C KN D R T +++
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 43/306 (14%)
Query: 75 RTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKW-RGTEIAAKTIRSSIASNPRVR 133
R LS ++ G K++E AYG L+K +A K ++ S ++ R
Sbjct: 40 RNRLSFGKTLGAGAFGKVVE------ATAYG---LIKSDAAMTVAVKMLKPS--AHLTER 88
Query: 134 NSFMKELGLWQKL-RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKK------GKL 186
+ M EL + L H NIV LG + +TEY G L + L++K K
Sbjct: 89 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 148
Query: 187 DPPT------------AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVT 234
P ++++ +A+GM +L IHRDL N+L K+
Sbjct: 149 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKIC 205
Query: 235 DFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS 294
DFGL++ + +Y K ++MAPE Y DV+S+ + + E+F G S
Sbjct: 206 DFGLARDIKNDSNYVVK-GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 264
Query: 295 NRADTAVQVADRRAYEDSRPALSSLYPEPIKA----LLRECWHKNPDRRPTFEEIIFRLE 350
V D + Y+ + L PE A +++ CW +P +RPTF++I+ +E
Sbjct: 265 PYPGMPV---DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
Query: 351 -AIQES 355
I ES
Sbjct: 322 KQISES 327
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 13/199 (6%)
Query: 99 IDPGAYGEVYLVKWR-GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G YG VY + G A K IR + + ++ ++E+ + ++L+H NIV+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 158 LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ +RL+ + E+L + L +L +G L+ TA ++ L + G+ Y H R ++HR
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHR 124
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYR-RESYGK 274
DL P N+L + G LK+ DFGL++ Y++++ + Y AP+V + Y
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKYST 180
Query: 275 SVDVFSFALIVHEMFQGGP 293
++D++S I EM G P
Sbjct: 181 TIDIWSVGCIFAEMVNGAP 199
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G G V V+ R G +A K I I P +RN ++EL + + P IV F G
Sbjct: 27 GNGGVVTKVQHRPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFY 84
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E++ GSL +LK+ ++ ++ + RG+ YL H I+HRD+
Sbjct: 85 SDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVK 142
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
PSN+L + G +K+ DFG+S Q DS + G+ YMAPE + Y D++
Sbjct: 143 PSNILVNSRGEIKLCDFGVS--GQLIDSMANSF---VGTRSYMAPERLQGTHYSVQSDIW 197
Query: 280 SFALIVHEMFQG 291
S L + E+ G
Sbjct: 198 SMGLSLVELAVG 209
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 30/265 (11%)
Query: 97 GGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
G + GA+G+VY + + T + A S + + +M E+ + HPNIV+ L
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASCDHPNIVKLLD 101
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIAR----GMNYLHHHRPHA 212
+ L L E+ G++ ++ + L+ P + + + +NYLH ++
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDNK--- 155
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLS----KIAQEKDSYSYKMTGGTGSYRYMAPEVYR 268
IIHRDL N+L G +K+ DFG+S + Q +DS+ G+ +MAPEV
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF-------IGTPYWMAPEVVM 208
Query: 269 RES-----YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS--SLYP 321
E+ Y DV+S + + EM + P + ++V + A + P L+ S +
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP-PTLAQPSRWS 267
Query: 322 EPIKALLRECWHKNPDRRPTFEEII 346
K L++C KN D R T +++
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 43/306 (14%)
Query: 75 RTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKW-RGTEIAAKTIRSSIASNPRVR 133
R LS ++ G K++E AYG L+K +A K ++ S ++ R
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEAT------AYG---LIKSDAAMTVAVKMLKPS--AHLTER 93
Query: 134 NSFMKELGLWQKL-RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKK------GKL 186
+ M EL + L H NIV LG + +TEY G L + L++K K
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 187 DPPT------------AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVT 234
P ++++ +A+GM +L IHRDL N+L K+
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKIC 210
Query: 235 DFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS 294
DFGL++ + +Y K ++MAPE Y DV+S+ + + E+F G S
Sbjct: 211 DFGLARDIKNDSNYVVK-GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 295 NRADTAVQVADRRAYEDSRPALSSLYPEPIKA----LLRECWHKNPDRRPTFEEIIFRLE 350
V D + Y+ + L PE A +++ CW +P +RPTF++I+ +E
Sbjct: 270 PYPGMPV---DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
Query: 351 -AIQES 355
I ES
Sbjct: 327 KQISES 332
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 96 RGGIDPGAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ 153
R + G++G+V L T+ +A K I + + +E+ + LRHP+I++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
V+ ++ + EY G L D + +K ++ + I + Y H H+ I
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---I 129
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY- 272
+HRDL P N+L D+ ++K+ DFGLS I + + + GS Y APEV + Y
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF----LKTSCGSPNYAAPEVINGKLYA 185
Query: 273 GKSVDVFSFALIVHEMFQG 291
G VDV+S ++++ M G
Sbjct: 186 GPEVDVWSCGIVLYVMLVG 204
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 95
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA------------VAYALDIAR 200
LG K L+ + E+ + G+L L+ K P + Y+ +A+
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAK 155
Query: 201 GMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYR 260
GM +L + IHRDL N+L E +K+ DFGL++ + Y K +
Sbjct: 156 GMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDARLPLK 211
Query: 261 YMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP-ALSS 318
+MAPE Y DV+SF +++ E+F G S + + RR E +R A
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 271
Query: 319 LYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + +L +CWH P +RPTF E++
Sbjct: 272 TTPEMYQTML-DCWHGEPSQRPTFSELV 298
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 11/257 (4%)
Query: 107 VYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIF 166
VY ++ + ++A K ++ + M+E + +L +P IV+ +GV + +E L+
Sbjct: 356 VYRMRKKQIDVAIKVLKQ--GTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALML 412
Query: 167 LTEYLRNGSLHDILKKKGKLDPPTAVAYAL-DIARGMNYLHHHRPHAIIHRDLTPSNVLQ 225
+ E G LH L K + P + VA L ++ GM YL +HR+L NVL
Sbjct: 413 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLL 469
Query: 226 DEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIV 285
+ K++DFGLSK DSY + G ++ APE + DV+S+ + +
Sbjct: 470 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 529
Query: 286 HEMFQGGPSNRADTAVQVADRRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRPTFE 343
E G + ++ + A+ + R P + AL+ +CW + RP F
Sbjct: 530 WEALSYG--QKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFL 587
Query: 344 EIIFRLEAIQESFQKKT 360
+ R+ A S K
Sbjct: 588 TVEQRMRACYYSLASKV 604
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 13/199 (6%)
Query: 99 IDPGAYGEVYLVKWR-GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G YG VY + G A K IR + + ++ ++E+ + ++L+H NIV+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 158 LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ +RL+ + E+L + L +L +G L+ TA ++ L + G+ Y H R ++HR
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHR 124
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYR-RESYGK 274
DL P N+L + G LK+ DFGL++ Y++++ + Y AP+V + Y
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLMGSKKYST 180
Query: 275 SVDVFSFALIVHEMFQGGP 293
++D++S I EM G P
Sbjct: 181 TIDIWSVGCIFAEMVNGTP 199
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 43/306 (14%)
Query: 75 RTPLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKW-RGTEIAAKTIRSSIASNPRVR 133
R LS ++ G K++E AYG L+K +A K ++ S ++ R
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEAT------AYG---LIKSDAAMTVAVKMLKPS--AHLTER 93
Query: 134 NSFMKELGLWQKL-RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKK------GKL 186
+ M EL + L H NIV LG + +TEY G L + L++K K
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 187 DPPT------------AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVT 234
P ++++ +A+GM +L IHRDL N+L K+
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKIC 210
Query: 235 DFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPS 294
DFGL++ + +Y K ++MAPE Y DV+S+ + + E+F G S
Sbjct: 211 DFGLARHIKNDSNYVVK-GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 295 NRADTAVQVADRRAYEDSRPALSSLYPEPIKA----LLRECWHKNPDRRPTFEEIIFRLE 350
V D + Y+ + L PE A +++ CW +P +RPTF++I+ +E
Sbjct: 270 PYPGMPV---DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
Query: 351 -AIQES 355
I ES
Sbjct: 327 KQISES 332
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 33/271 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 39 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 96
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA---------------VAYALD 197
LG K L+ + E+ + G+L L+ K P + Y+
Sbjct: 97 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQ 156
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
+A+GM +L + IHRDL N+L E +K+ DFGL++ KD +
Sbjct: 157 VAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDARL 212
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP-A 315
++MAPE Y DV+SF +++ E+F G S + + RR E +R A
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 316 LSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + +L +CWH P +RPTF E++
Sbjct: 273 PDYTTPEMYQTML-DCWHGEPSQRPTFSELV 302
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 13/199 (6%)
Query: 99 IDPGAYGEVYLVKWR-GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV 157
I G YG VY + G A K IR + + ++ ++E+ + ++L+H NIV+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 158 LKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ +RL+ + E+L + L +L +G L+ TA ++ L + G+ Y H R ++HR
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHR 124
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYR-RESYGK 274
DL P N+L + G LK+ DFGL++ Y++++ + Y AP+V + Y
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKYST 180
Query: 275 SVDVFSFALIVHEMFQGGP 293
++D++S I EM G P
Sbjct: 181 TIDIWSVGCIFAEMVNGTP 199
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 4/228 (1%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK 181
I + A++P +++ + E + Q+L +P IV+ +G+ + +E + + E G L+ L+
Sbjct: 45 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 103
Query: 182 KKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI 241
+ + + ++ GM YL +HRDL NVL + K++DFGLSK
Sbjct: 104 QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 160
Query: 242 AQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ ++ T G ++ APE + DV+SF +++ E F G
Sbjct: 161 LRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
+ R + P + L+ CW + + RP F + RL
Sbjct: 221 SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 95
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA------------VAYALDIAR 200
LG K L+ + E+ + G+L L+ K P + Y+ +A+
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAK 155
Query: 201 GMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYR 260
GM +L + IHRDL N+L E +K+ DFGL++ + Y K +
Sbjct: 156 GMEFLASRK---XIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK-GDARLPLK 211
Query: 261 YMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP-ALSS 318
+MAPE Y DV+SF +++ E+F G S + + RR E +R A
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDY 271
Query: 319 LYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + +L +CWH P +RPTF E++
Sbjct: 272 TTPEMYQTML-DCWHGEPSQRPTFSELV 298
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 99 IDPGAYGEV---YLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
+ GAYG V Y + R ++A K + S R ++ +EL L + L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLL 93
Query: 156 GVLKHSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRP 210
V + + ++L L L++I+K + D + RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR- 269
IIHRDL PSNV +E L++ DFGL++ A E +MTG + Y APE+
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADE------EMTGYVATRWYRAPEIMLNW 203
Query: 270 ESYGKSVDVFSFALIVHEMFQG 291
Y ++VD++S I+ E+ QG
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQG 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 16/243 (6%)
Query: 111 KWRGTEIAAKTI--RSSIASNPRV-RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G E AAK I R S AS V R +E+ + +++ HPNI+ V ++ ++ +
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A ++ I G+NYLH + I H DL P N++ +
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLD 150
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
H+K+ DFGL+ + +D +K GT ++APE+ E G D++S +
Sbjct: 151 KNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGV 206
Query: 284 IVHEMFQGGPSNRADTAVQ-VADRRAYE-DSRPALSSLYPEPIKALLRECWHKNPDRRPT 341
I + + G DT + +A+ A D S E K +R+ K +R T
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLT 266
Query: 342 FEE 344
+E
Sbjct: 267 IQE 269
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 22/218 (10%)
Query: 138 KELGLWQKLRHPNIVQFLGVLK--HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYA 195
+E+ + +KL HPN+V+ + VL + + L + E + G + ++ K L A Y
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYF 143
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG 255
D+ +G+ YLH+ + IIHRD+ PSN+L E GH+K+ DFG+S + D+ ++
Sbjct: 144 QDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL---LSNT 197
Query: 256 TGSYRYMAPEVY---RRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDS 312
G+ +MAPE R+ GK++DV++ + ++ F G D + + +
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY-CFVFGQCPFMDERIMCLHSKIKSQA 256
Query: 313 -----RPALSSLYPEPIKALLRECWHKNPDRRPTFEEI 345
+P ++ E +K L+ KNP+ R EI
Sbjct: 257 LEFPDQPDIA----EDLKDLITRMLDKNPESRIVVPEI 290
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 34/272 (12%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 40 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 97
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA----------------VAYAL 196
LG K L+ + E+ + G+L L+ K P + Y+
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSF 157
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGT 256
+A+GM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 158 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 257 GSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP- 314
++MAPE Y DV+SF +++ E+F G S + + RR E +R
Sbjct: 215 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 273
Query: 315 ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
A PE + +L +CWH P +RPTF E++
Sbjct: 274 APDYTTPEMYQTML-DCWHGEPSQRPTFSELV 304
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV L K + G E A K I + S ++E+ L ++L HPNI++ +
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 96
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E G L D + + + A + G+ Y+H ++ I+HRDL
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLK 153
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L + + ++++ DFGLS + S KM G+ Y+APEV +Y +
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTHFEA----SKKMKDKIGTAYYIAPEVLHG-TYDEKC 208
Query: 277 DVFSFALIVHEMFQGGP 293
DV+S +I++ + G P
Sbjct: 209 DVWSTGVILYILLSGCP 225
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 19/247 (7%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV L K + G E A K I + S ++E+ L ++L HPNI++ +
Sbjct: 43 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 102
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E G L D + + + A + G+ Y+H ++ I+HRDL
Sbjct: 103 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLK 159
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L + + ++++ DFGLS + S KM G+ Y+APEV +Y +
Sbjct: 160 PENLLLESKSKDANIRIIDFGLSTHFEA----SKKMKDKIGTAYYIAPEVLHG-TYDEKC 214
Query: 277 DVFSFALIVHEMFQGGP----SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECW 332
DV+S +I++ + G P +N D +V ++ Y P + E K L+R+
Sbjct: 215 DVWSTGVILYILLSGCPPFNGANEYDILKKV-EKGKYTFELPQWKKV-SESAKDLIRKML 272
Query: 333 HKNPDRR 339
P R
Sbjct: 273 TYVPSMR 279
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ + + M EL + + H N+V
Sbjct: 40 GAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLNVVN 97
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA--------------VAYALDI 198
LG K L+ + E+ + G+L L+ K P + Y+ +
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQV 157
Query: 199 ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGS 258
A+GM +L + IHRDL N+L E +K+ DFGL++ KD +
Sbjct: 158 AKGMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDARLP 213
Query: 259 YRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYEDSRP-AL 316
++MAPE Y DV+SF +++ E+F G S + + RR E +R A
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEII 346
PE + +L +CWH P +RPTF E++
Sbjct: 274 DYTTPEMYQTML-DCWHGEPSQRPTFSELV 302
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV L K + G E A K I + S ++E+ L ++L HPNI++ +
Sbjct: 60 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 119
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E G L D + + + A + G+ Y+H ++ I+HRDL
Sbjct: 120 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLK 176
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L + + ++++ DFGLS + S KM G+ Y+APEV +Y +
Sbjct: 177 PENLLLESKSKDANIRIIDFGLSTHFEA----SKKMKDKIGTAYYIAPEVLHG-TYDEKC 231
Query: 277 DVFSFALIVHEMFQGGP 293
DV+S +I++ + G P
Sbjct: 232 DVWSTGVILYILLSGCP 248
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV L K + G E A K I + S ++E+ L ++L HPNI++ +
Sbjct: 61 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 120
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E G L D + + + A + G+ Y+H ++ I+HRDL
Sbjct: 121 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLK 177
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L + + ++++ DFGLS + S KM G+ Y+APEV +Y +
Sbjct: 178 PENLLLESKSKDANIRIIDFGLSTHFEA----SKKMKDKIGTAYYIAPEVLHG-TYDEKC 232
Query: 277 DVFSFALIVHEMFQGGP 293
DV+S +I++ + G P
Sbjct: 233 DVWSTGVILYILLSGCP 249
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 99 IDPGAYGEV---YLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
+ GAYG V Y + R ++A K + S R ++ +EL L + L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLL 93
Query: 156 GVLKHSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRP 210
V + + ++L L L++I+K + D + RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR- 269
IIHRDL PSNV +E L++ DFGL++ A E +MTG + Y APE+
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADE------EMTGYVATRWYRAPEIMLNW 203
Query: 270 ESYGKSVDVFSFALIVHEMFQG 291
Y ++VD++S I+ E+ QG
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQG 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 30/265 (11%)
Query: 97 GGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
G + GA+G+VY + + T + A S + + +M E+ + HPNIV+ L
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASCDHPNIVKLLD 101
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIAR----GMNYLHHHRPHA 212
+ L L E+ G++ ++ + L+ P + + + +NYLH ++
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDNK--- 155
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLS----KIAQEKDSYSYKMTGGTGSYRYMAPEVYR 268
IIHRDL N+L G +K+ DFG+S + Q +D + G+ +MAPEV
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF-------IGTPYWMAPEVVM 208
Query: 269 RES-----YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS--SLYP 321
E+ Y DV+S + + EM + P + ++V + A + P L+ S +
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP-PTLAQPSRWS 267
Query: 322 EPIKALLRECWHKNPDRRPTFEEII 346
K L++C KN D R T +++
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 92 ILEDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
+L+ I G+ G V L + + G ++A K + + R R E+ + + +H
Sbjct: 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQR-RELLFNEVVIMRDYQHF 102
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHR 209
N+V+ E L L E+L+ G+L DI+ + +L+ + + + YLH
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLH--- 158
Query: 210 PHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQ-EKDSYSYKMTGGTGSYRYMAPEVYR 268
+IHRD+ ++L G +K++DFG AQ KD K GT + MAPEV
Sbjct: 159 AQGVIHRDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYW--MAPEVIS 214
Query: 269 RESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYP-EPI-KA 326
R Y VD++S ++V EM G P +D+ VQ A +R + P L + + P+ +
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-AMKRLRDSPPPKLKNSHKVSPVLRD 273
Query: 327 LLRECWHKNPDRRPTFEEIIFRLEAIQESFQKKTVP 362
L ++P R T +E++ +Q + VP
Sbjct: 274 FLERMLVRDPQERATAQELLDHPFLLQTGLPECLVP 309
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 99 IDPGAYGEV---YLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFL 155
+ GAYG V Y + R ++A K + S R ++ +EL L + L+H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLL 85
Query: 156 GVLKHSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRP 210
V + + ++L L L++I+K + D + RG+ Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIHSA-- 142
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR- 269
IIHRDL PSNV +E L++ DFGL++ A E +MTG + Y APE+
Sbjct: 143 -GIIHRDLKPSNVAVNEDCELRILDFGLARQADE------EMTGYVATRWYRAPEIMLNW 195
Query: 270 ESYGKSVDVFSFALIVHEMFQG 291
Y ++VD++S I+ E+ QG
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQG 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 42/284 (14%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I GAYG V R T +A K I S + ++E+ + + RH N++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKI--SPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 157 VLKHSE----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+L+ S R +++ + L L+ +LK + +L + I RG+ Y+H
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQ-QLSNDHICYFLYQILRGLKYIHSAN--- 164
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRES 271
++HRDL PSN+L + LK+ DFGL++IA + ++ +T + Y APE+ +
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 272 YGKSVDVFSFALIVHEMFQ---------------------GGPSNRADTAVQVADRRAYE 310
Y KS+D++S I+ EM G PS + R Y
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYL 284
Query: 311 DSRP-----ALSSLYPEPIKA---LLRECWHKNPDRRPTFEEII 346
S P A + L+P+ LL NP++R T EE +
Sbjct: 285 QSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEAL 328
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GA VY K +GT+ A K ++ ++ + E+G+ +L HPNI++ + +
Sbjct: 64 GATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ + E + G L D + +KG A I + YLH + I+HRDL
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLK 175
Query: 220 PSNVLQDEA---GHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L LK+ DFGLSKI + + M G+ Y APE+ R +YG V
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVE----HQVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 277 DVFSFALIVHEMFQG 291
D++S +I + + G
Sbjct: 232 DMWSVGIITYILLCG 246
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+++ H HR
Sbjct: 70 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR- 123
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 177
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 178 CKYYSTAVDIWSLGCIFAEM 197
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 77 PLSDARSFGHVVICKILEDRGGIDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRN 134
PL D +F V I G YG VY K G +A K IR + V +
Sbjct: 2 PLVDMENFQKV---------EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPS 51
Query: 135 SFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV-- 192
+ ++E+ L ++L HPNIV+ L V+ +L + E+L H LKK T +
Sbjct: 52 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPL 106
Query: 193 ----AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDS 247
+Y + +G+ + H HR ++HRDL P N+L + G +K+ DFGL++ +
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 163
Query: 248 YSYKMTGGTGSYRYMAPEVYRR-ESYGKSVDVFSFALIVHEM 288
Y++++ + Y APE+ + Y +VD++S I EM
Sbjct: 164 YTHEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 76
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 77 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 130
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYR- 268
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 131 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 184
Query: 269 RESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 185 XKYYSTAVDIWSLGCIFAEM 204
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 102 GAYGEVYLVKWR-GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G+VY + GT +A K ++ ++ F E+ + H N+++ G
Sbjct: 49 GGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ--FQTEVEMISMAVHRNLLRLRGFCMT 106
Query: 161 SERLIFLTEYLRNGSLHDILKKKGK----LDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ + Y+ NGS+ L+++ + LD P AL ARG+ YLH H IIHR
Sbjct: 107 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR 166
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
D+ +N+L DE V DFGL+K+ KD + GT ++APE +
Sbjct: 167 DVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGT--IGHIAPEYLSTGKSSEKT 224
Query: 277 DVFSFALIVHEMFQG 291
DVF + +++ E+ G
Sbjct: 225 DVFGYGVMLLELITG 239
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 15/196 (7%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 71
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV--AYALDIARGMNYLHHHRPHAII 214
V+ +L + E+L + L D + P + +Y + +G+ + H HR ++
Sbjct: 72 VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 127
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+ + Y
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLGCKYY 183
Query: 273 GKSVDVFSFALIVHEM 288
+VD++S I EM
Sbjct: 184 STAVDIWSLGCIFAEM 199
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 15/196 (7%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV--AYALDIARGMNYLHHHRPHAII 214
V+ +L + E+L + L D + P + +Y + +G+ + H HR ++
Sbjct: 73 VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 128
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+ + Y
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLGCKYY 184
Query: 273 GKSVDVFSFALIVHEM 288
+VD++S I EM
Sbjct: 185 STAVDIWSLGCIFAEM 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV--AYALDIARGMNYLHHHRPHAII 214
V+ +L + E+L L D + P + +Y + +G+ + H HR ++
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 125
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+ + Y
Sbjct: 126 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLGCKYY 181
Query: 273 GKSVDVFSFALIVHEM 288
+VD++S I EM
Sbjct: 182 STAVDIWSLGCIFAEM 197
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 70 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYR- 268
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 177
Query: 269 RESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 178 XKYYSTAVDIWSLGCIFAEM 197
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 92 ILEDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
+L D G+ G +G+V + + + G ++A K + + V +E+ + RHP
Sbjct: 14 VLGDTLGV--GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHR 209
+I++ V+ + EY+ G L D + K G+++ A I ++Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR-- 129
Query: 210 PHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
H ++HRDL P NVL D + K+ DFGLS + + + + GS Y APEV
Sbjct: 130 -HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRDSCGSPNYAAPEVISG 184
Query: 270 ESY-GKSVDVFSFALIVHEMFQG 291
Y G VD++S +I++ + G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 71 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 124
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 125 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 178
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 179 CKYYSTAVDIWSLGCIFAEM 198
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 92 ILEDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
+L D G+ G +G+V + + + G ++A K + + V +E+ + RHP
Sbjct: 14 VLGDTLGV--GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHR 209
+I++ V+ + EY+ G L D + K G+++ A I ++Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR-- 129
Query: 210 PHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
H ++HRDL P NVL D + K+ DFGLS + + + + GS Y APEV
Sbjct: 130 -HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRTSCGSPNYAAPEVISG 184
Query: 270 ESY-GKSVDVFSFALIVHEMFQG 291
Y G VD++S +I++ + G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 17/253 (6%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G+ G V + K G ++A K + + R R E+ + + H N+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVK--KMDLRKQQR-RELLFNEVVIMRDYHHDNVVDMYS 109
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ L + E+L G+L DI+ +++ L + R ++YLH+ +IHR
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQ---GVIHR 165
Query: 217 DLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
D+ ++L G +K++DFG +++++E K G+ +MAPEV R YG
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVP----KRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLY--PEPIKALLRECWH 333
VD++S ++V EM G P + +Q A RR + P + L+ ++ L
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLV 280
Query: 334 KNPDRRPTFEEII 346
+ P +R T +E++
Sbjct: 281 REPSQRATAQELL 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 69 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 176
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 177 CKYYSTAVDIWSLGCIFAEM 196
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIR--SSIASNPRVRNSFMKELGLWQKLR---HPNIVQF 154
GAYG VY + G +A K++R + + S ++E+ L ++L HPN+V+
Sbjct: 20 GAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRL 79
Query: 155 LGVLKHS--ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL-----DIARGMNYLHH 207
+ V S +R I +T + D+ K PP A + RG+++LH
Sbjct: 80 MDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 138
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM--TGGTGSYRYMAPE 265
+ I+HRDL P N+L G +K+ DFGL++I YSY+M T + Y APE
Sbjct: 139 N---CIVHRDLKPENILVTSGGTVKLADFGLARI------YSYQMALTPVVVTLWYRAPE 189
Query: 266 VYRRESYGKSVDVFSFALIVHEMFQGGP 293
V + +Y VD++S I EMF+ P
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 76
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 77 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 130
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 131 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 184
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 185 CKYYSTAVDIWSLGCIFAEM 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 70 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 177
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 178 CKYYSTAVDIWSLGCIFAEM 197
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 70 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 177
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 178 CKYYSTAVDIWSLGCIFAEM 197
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 69 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 176
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 177 CKYYSTAVDIWSLGCIFAEM 196
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 42/242 (17%)
Query: 134 NSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK--------KKGK 185
+ +KE+ + HPNIV + + L + + L GS+ DI+K K G
Sbjct: 53 DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 112
Query: 186 LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEK 245
LD T ++ G+ YLH + IHRD+ N+L E G +++ DFG+S
Sbjct: 113 LDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS------ 163
Query: 246 DSYSYKMTGG-----------TGSYRYMAPEVYRR-ESYGKSVDVFSFALIVHEMFQGGP 293
++ TGG G+ +MAPEV + Y D++SF + E+ G
Sbjct: 164 ---AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 220
Query: 294 SNRADTAVQVADRRAYEDSRPALSS---------LYPEPIKALLRECWHKNPDRRPTFEE 344
++V ++ P+L + Y + + ++ C K+P++RPT E
Sbjct: 221 PYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAE 279
Query: 345 II 346
++
Sbjct: 280 LL 281
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 73
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 74 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 127
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 128 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 181
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 182 CKYYSTAVDIWSLGCIFAEM 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 70 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 177
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 178 CKYYSTAVDIWSLGCIFAEM 197
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 73 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 127 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 180
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 181 CKYYSTAVDIWSLGCIFAEM 200
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 42/242 (17%)
Query: 134 NSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILK--------KKGK 185
+ +KE+ + HPNIV + + L + + L GS+ DI+K K G
Sbjct: 58 DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 117
Query: 186 LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEK 245
LD T ++ G+ YLH + IHRD+ N+L E G +++ DFG+S
Sbjct: 118 LDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS------ 168
Query: 246 DSYSYKMTGG-----------TGSYRYMAPEVYRR-ESYGKSVDVFSFALIVHEMFQGGP 293
++ TGG G+ +MAPEV + Y D++SF + E+ G
Sbjct: 169 ---AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225
Query: 294 SNRADTAVQVADRRAYEDSRPALSS---------LYPEPIKALLRECWHKNPDRRPTFEE 344
++V ++ P+L + Y + + ++ C K+P++RPT E
Sbjct: 226 PYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAE 284
Query: 345 II 346
++
Sbjct: 285 LL 286
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 73 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 126
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 127 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 180
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 181 CKYYSTAVDIWSLGCIFAEM 200
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 71
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 72 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 125
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 126 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 179
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 180 CKYYSTAVDIWSLGCIFAEM 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 71
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 72 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 125
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 126 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 179
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 180 CKYYSTAVDIWSLGCIFAEM 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 70 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 177
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 178 CKYYSTAVDIWSLGCIFAEM 197
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 123/257 (47%), Gaps = 17/257 (6%)
Query: 105 GEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH--SE 162
GE++ +W+G +I K ++ S + R+ F +E + HPN++ LG + +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRD-FNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 163 RLIFLTEYLRNGSLHDILKKKGK--LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTP 220
+T + GSL+++L + +D AV +ALD ARG +LH P L P
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEP-------LIP 135
Query: 221 SNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR---ESYGKSVD 277
+ L + + + + ++I+ +S++ G + ++APE ++ ++ +S D
Sbjct: 136 RHALNSRS--VXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSAD 193
Query: 278 VFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPD 337
+SFA+++ E+ + ++ + A E RP + + L + C +++P
Sbjct: 194 XWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPA 253
Query: 338 RRPTFEEIIFRLEAIQE 354
+RP F+ I+ LE Q+
Sbjct: 254 KRPKFDXIVPILEKXQD 270
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 71 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 124
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 125 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 178
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 179 CKYYSTAVDIWSLGCIFAEM 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 70 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 177
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 178 CKYYSTAVDIWSLGCIFAEM 197
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 69 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 176
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 177 CKYYSTAVDIWSLGCIFAEM 196
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 157 VLKHSERLIFLTEYLRNG--SLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
V+ +L + E+L + D G + P +Y + +G+ + H HR ++
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR---VL 128
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+ + Y
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLGCKYY 184
Query: 273 GKSVDVFSFALIVHEM 288
+VD++S I EM
Sbjct: 185 STAVDIWSLGCIFAEM 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 71
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 72 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 125
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 126 --VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 179
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 180 CKYYSTAVDIWSLGCIFAEM 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 70 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 177
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 178 CKYYSTAVDIWSLGCIFAEM 197
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 71 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 124
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 125 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 178
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 179 CKYYSTAVDIWSLGCIFAEM 198
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 71 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 124
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 125 --VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 178
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 179 CKYYSTAVDIWSLGCIFAEM 198
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 69 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLG 176
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 177 CKYYSTAVDIWSLGCIFAEM 196
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 21/199 (10%)
Query: 102 GAYGEV---YLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
GAYG V Y VK G +IA K + S + ++ +EL L + ++H N++ L V
Sbjct: 62 GAYGSVCSSYDVK-SGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVF 119
Query: 159 KHSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
+ L ++L +L L++I+K + KL I RG+ Y+H I
Sbjct: 120 TPATSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---I 175
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
IHRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 176 IHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHY 229
Query: 273 GKSVDVFSFALIVHEMFQG 291
+VD++S I+ E+ G
Sbjct: 230 NMTVDIWSVGCIMAELLTG 248
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 16/243 (6%)
Query: 111 KWRGTEIAAKTI--RSSIASNPRV-RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G E AAK I R S AS V R +E+ + +++ H N++ V ++ ++ +
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLI 93
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A ++ I G+NYLH + I H DL P N++ +
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLD 150
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
H+K+ DFGL+ + +D +K GT ++APE+ E G D++S +
Sbjct: 151 KNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGV 206
Query: 284 IVHEMFQGGPSNRADTAVQ-VADRRAYE-DSRPALSSLYPEPIKALLRECWHKNPDRRPT 341
I + + G DT + +A+ A D S E K +R+ K +R T
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLT 266
Query: 342 FEE 344
+E
Sbjct: 267 IQE 269
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 15/253 (5%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
G +G+VY + + T + A S + + +M E+ + HPNIV+ L +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEIDILASCDHPNIVKLLDAFYYE 79
Query: 162 ERLIFLTEYLRNGSLHDI-LKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTP 220
L L E+ G++ + L+ + L +NYLH ++ IIHRDL
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKA 136
Query: 221 SNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES-----YGKS 275
N+L G +K+ DFG+S A+ + + G+ +MAPEV E+ Y
Sbjct: 137 GNILFTLDGDIKLADFGVS--AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 276 VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS--SLYPEPIKALLRECWH 333
DV+S + + EM + P + ++V + A + P L+ S + K L++C
Sbjct: 195 ADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP-PTLAQPSRWSSNFKDFLKKCLE 253
Query: 334 KNPDRRPTFEEII 346
KN D R T +++
Sbjct: 254 KNVDARWTTSQLL 266
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNY 204
L H +IV+ LG+ S L +T+YL GSL D +++ +G L P + + + IA+GM Y
Sbjct: 72 LDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDS---YSYKMTGGTGSYRY 261
L H ++HR+L NVL ++V DFG++ + D YS T ++
Sbjct: 131 LEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT----PIKW 183
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYP 321
MA E Y DV+S+ + V E+ G A + + R A +
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICT 243
Query: 322 EPIKALLRECWHKNPDRRPTFEEI 345
+ ++ +CW + + RPTF+E+
Sbjct: 244 IDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 55/94 (58%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
DS+G L Y + G + V L KG +PN D D RT LH A+ G EIV LLL KG
Sbjct: 67 DSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKG 126
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGG 98
AD N+ D GRTPL AR G+ I K+LE +GG
Sbjct: 127 ADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 6 SEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGA 65
SE RL+ + G++ V LE G +PN +D D RT LH A+ G EIV LLL KGA
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGA 61
Query: 66 DVNSLDRWGRTPLSDARSFGHVVICKILEDRGGIDPGA 103
D N+ D GRTPL A GH I K+L + G DP A
Sbjct: 62 DPNAKDSDGRTPLHYAAENGHKEIVKLLLSK-GADPNA 98
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
DS+G L Y + G + V L KG +PN D D RT LH A+ G EIV LLL KG
Sbjct: 34 DSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKG 93
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGGIDP 101
AD N+ D GRTPL A GH I K+L + G DP
Sbjct: 94 ADPNAKDSDGRTPLHYAAENGHKEIVKLLLSK-GADP 129
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 16/243 (6%)
Query: 111 KWRGTEIAAKTI--RSSIASNPRV-RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G E AAK I R S AS V R +E+ + +++ H N++ V ++ ++ +
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLI 93
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A ++ I G+NYLH + I H DL P N++ +
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLD 150
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
H+K+ DFGL+ + +D +K GT ++APE+ E G D++S +
Sbjct: 151 KNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGV 206
Query: 284 IVHEMFQGGPSNRADTAVQ-VADRRAYE-DSRPALSSLYPEPIKALLRECWHKNPDRRPT 341
I + + G DT + +A+ A D S E K +R+ K +R T
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLT 266
Query: 342 FEE 344
+E
Sbjct: 267 IQE 269
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 54/305 (17%)
Query: 77 PLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSF 136
PL R+ ++ + I G +GEV+ KWRG E+A K S R S+
Sbjct: 33 PLLVQRTIARTIVLQ-----ESIGKGRFGEVWRGKWRGEEVAVKIFSS------REERSW 81
Query: 137 MKELGLWQK--LRHPNIVQFLGVLKHSE----RLIFLTEYLRNGSLHDILKKKGKLDPPT 190
+E ++Q LRH NI+ F+ +L +++Y +GSL D L + +
Sbjct: 82 FREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEG 140
Query: 191 AVAYALDIARGMNYLH------HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS-KIAQ 243
+ AL A G+ +LH +P AI HRDL N+L + G + D GL+ +
Sbjct: 141 MIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 199
Query: 244 EKDSYSYKMTGGTGSYRYMAPEVY-------RRESYGKSVDVFSFALI------------ 284
D+ G+ RYMAPEV ES+ K D+++ L+
Sbjct: 200 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGG 258
Query: 285 VHEMFQGGPSNRADTAVQVADRRAY---EDSRPALSSLYPE-----PIKALLRECWHKNP 336
+HE +Q + + V + R + RP + + + + ++RECW+ N
Sbjct: 259 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 318
Query: 337 DRRPT 341
R T
Sbjct: 319 AARLT 323
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 77 PLSDARSFGHVVICKILEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSF 136
PL R+ ++ + I G +GEV+ KWRG E+A K S R S+
Sbjct: 20 PLLVQRTIARTIVLQ-----ESIGKGRFGEVWRGKWRGEEVAVKIFSS------REERSW 68
Query: 137 MKELGLWQK--LRHPNIVQFLGVLKHSE----RLIFLTEYLRNGSLHDILKKKGKLDPPT 190
+E ++Q LRH NI+ F+ +L +++Y +GSL D L + +
Sbjct: 69 FREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEG 127
Query: 191 AVAYALDIARGMNYLH------HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS-KIAQ 243
+ AL A G+ +LH +P AI HRDL N+L + G + D GL+ +
Sbjct: 128 MIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 186
Query: 244 EKDSYSYKMTGGTGSYRYMAPEVY-------RRESYGKSVDVFSFALI------------ 284
D+ G+ RYMAPEV ES+ K D+++ L+
Sbjct: 187 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGG 245
Query: 285 VHEMFQGGPSNRADTAVQVADRRAY---EDSRPALSSLYP--EPIKAL---LRECWHKNP 336
+HE +Q + + V + R + RP + + + E ++ + +RECW+ N
Sbjct: 246 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 305
Query: 337 DRRPT 341
R T
Sbjct: 306 AARLT 310
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR---HPNIVQFLG 156
GAYG VY + G +A K++R + S ++E+ L ++L HPN+V+ +
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEE-GLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 157 VLKHS--ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL-----DIARGMNYLHHHR 209
V S +R I +T + D+ K PP A + RG+++LH +
Sbjct: 74 VCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN- 131
Query: 210 PHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG--TGSYRYMAPEVY 267
I+HRDL P N+L G +K+ DFGL++I YSY+M + Y APEV
Sbjct: 132 --CIVHRDLKPENILVTSGGTVKLADFGLARI------YSYQMALAPVVVTLWYRAPEVL 183
Query: 268 RRESYGKSVDVFSFALIVHEMFQGGP 293
+ +Y VD++S I EMF+ P
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 146 LRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHD-ILKKKGKLDPPTAVAYALDIARGMNY 204
L H +IV+ LG+ S L +T+YL GSL D + + +G L P + + + IA+GM Y
Sbjct: 90 LDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDS---YSYKMTGGTGSYRY 261
L H ++HR+L NVL ++V DFG++ + D YS T ++
Sbjct: 149 LEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT----PIKW 201
Query: 262 MAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYP 321
MA E Y DV+S+ + V E+ G A + + R A +
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICT 261
Query: 322 EPIKALLRECWHKNPDRRPTFEEI 345
+ ++ +CW + + RPTF+E+
Sbjct: 262 IDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G E AAK I+ S+ R R +E+ + +++RHPNI+ + ++ ++ +
Sbjct: 27 KGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLI 86
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G++YLH R I H DL P N++ +
Sbjct: 87 LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLD 143
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFG++ + + + G+ ++APE+ E G D++S +
Sbjct: 144 KNVPNPRIKLIDFGIAHKIEAGNEFKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGV 199
Query: 284 IVHEMFQGGPSNRADTAVQVADRRA---YEDSRPALSSLYPEPIKALLRECWHKNPDRRP 340
I + + G +T + + Y+ S+ E K +R K+P RR
Sbjct: 200 ITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT-SELAKDFIRRLLVKDPKRRM 258
Query: 341 T 341
T
Sbjct: 259 T 259
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK--LRHPNIVQFLG 156
I G +GEV+ KWRG E+A K S R S+ +E ++Q LRH NI+ F+
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSS------REERSWFREAEIYQTVMLRHENILGFIA 67
Query: 157 VLKHSE----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH------ 206
+L +++Y +GSL D L + + + AL A G+ +LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS-KIAQEKDSYSYKMTGGTGSYRYMAPE 265
+P AI HRDL N+L + G + D GL+ + D+ G+ RYMAPE
Sbjct: 127 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 266 VY-------RRESYGKSVDVFSFALI------------VHEMFQGGPSNRADTAVQVADR 306
V ES+ K D+++ L+ +HE +Q + + V +
Sbjct: 186 VLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 244
Query: 307 RAY---EDSRPALSSLYP--EPIKAL---LRECWHKNPDRRPT 341
R + RP + + + E ++ + +RECW+ N R T
Sbjct: 245 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 287
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 49/283 (17%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK--LRHPNIVQFLG 156
I G +GEV+ KWRG E+A K S R S+ +E ++Q LRH NI+ F+
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSS------REERSWFREAEIYQTVMLRHENILGFIA 70
Query: 157 VLKHSE----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH------ 206
+L +++Y +GSL D L + + + AL A G+ +LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS-KIAQEKDSYSYKMTGGTGSYRYMAPE 265
+P AI HRDL N+L + G + D GL+ + D+ G+ RYMAPE
Sbjct: 130 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 266 VY-------RRESYGKSVDVFSFALI------------VHEMFQGGPSNRADTAVQVADR 306
V ES+ K D+++ L+ +HE +Q + + V +
Sbjct: 189 VLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 247
Query: 307 RAY---EDSRPALSSLYPE-----PIKALLRECWHKNPDRRPT 341
R + RP + + + + ++RECW+ N R T
Sbjct: 248 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 290
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK--LRHPNIVQFLG 156
I G +GEV+ KWRG E+A K S R S+ +E ++Q LRH NI+ F+
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSS------REERSWFREAEIYQTVMLRHENILGFIA 64
Query: 157 VLKHSE----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHH---- 208
+L +++Y +GSL D L + + + AL A G+ +LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 209 --RPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS-KIAQEKDSYSYKMTGGTGSYRYMAPE 265
+P AI HRDL N+L + G + D GL+ + D+ G+ RYMAPE
Sbjct: 124 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 266 VY-------RRESYGKSVDVFSFALI------------VHEMFQGGPSNRADTAVQVADR 306
V ES+ K D+++ L+ +HE +Q + + V +
Sbjct: 183 VLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241
Query: 307 RAY---EDSRPALSSLYP--EPIKAL---LRECWHKNPDRRPT 341
R + RP + + + E ++ + +RECW+ N R T
Sbjct: 242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK--LRHPNIVQFLG 156
I G +GEV+ KWRG E+A K S R S+ +E ++Q LRH NI+ F+
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSS------REERSWFREAEIYQTVMLRHENILGFIA 65
Query: 157 VLKHSE----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH------ 206
+L +++Y +GSL D L + + + AL A G+ +LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGT 124
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS-KIAQEKDSYSYKMTGGTGSYRYMAPE 265
+P AI HRDL N+L + G + D GL+ + D+ G+ RYMAPE
Sbjct: 125 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 266 VY-------RRESYGKSVDVFSFALI------------VHEMFQGGPSNRADTAVQVADR 306
V ES+ K D+++ L+ +HE +Q + + V +
Sbjct: 184 VLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 242
Query: 307 RAY---EDSRPALSSLYP--EPIKAL---LRECWHKNPDRRPT 341
R + RP + + + E ++ + +RECW+ N R T
Sbjct: 243 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 285
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV L K + G E A K I + S ++E+ L ++L HPNI + +
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFE 96
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E G L D + + + A + G+ Y H ++ I+HRDL
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK---IVHRDLK 153
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N+L + + ++++ DFGLS + S K G+ Y+APEV +Y +
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTHFEA----SKKXKDKIGTAYYIAPEVLHG-TYDEKC 208
Query: 277 DVFSFALIVHEMFQGGP 293
DV+S +I++ + G P
Sbjct: 209 DVWSTGVILYILLSGCP 225
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 69
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 70 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 123
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 177
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 178 CKYYSTAVDIWSLGCIFAEM 197
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV------AYALDIARGMNYLHHHRP 210
V+ +L + E+L H LKK T + +Y + +G+ + H HR
Sbjct: 69 VIHTENKLYLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
++HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLG 176
Query: 270 -ESYGKSVDVFSFALIVHEM 288
+ Y +VD++S I EM
Sbjct: 177 CKYYSTAVDIWSLGCIFAEM 196
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR---HPNIVQFLG 156
GAYG VY + G +A K++R + S ++E+ L ++L HPN+V+ +
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEE-GLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 157 VLKHS--ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL-----DIARGMNYLHHHR 209
V S +R I +T + D+ K PP A + RG+++LH +
Sbjct: 74 VCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN- 131
Query: 210 PHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMT--GGTGSYRYMAPEVY 267
I+HRDL P N+L G +K+ DFGL++I YSY+M + Y APEV
Sbjct: 132 --CIVHRDLKPENILVTSGGTVKLADFGLARI------YSYQMALDPVVVTLWYRAPEVL 183
Query: 268 RRESYGKSVDVFSFALIVHEMFQGGP 293
+ +Y VD++S I EMF+ P
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 12/222 (5%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFLG--VLKHSERLIFLTEYLRNGSLHDILKKKGK----L 186
+ + E+ L ++L+HPNIV++ + + + L + EY G L ++ K K L
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 187 DPPTAVAYALDIARGMNYLHHHRP--HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQE 244
D + + + H H ++HRDL P+NV D ++K+ DFGL++I
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 245 KDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVA 304
S++ G+ YM+PE R SY + D++S +++E+ P A + ++A
Sbjct: 169 DTSFA---KAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
Query: 305 DRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+ E + Y + + ++ + RP+ EEI+
Sbjct: 226 G-KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 102 GAYGEVYLVK--WRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR---HPNIVQFLG 156
GAYG VY + G +A K++R + S ++E+ L ++L HPN+V+ +
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEE-GLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 157 VLKHS--ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL-----DIARGMNYLHHHR 209
V S +R I +T + D+ K PP A + RG+++LH +
Sbjct: 74 VCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN- 131
Query: 210 PHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMT--GGTGSYRYMAPEVY 267
I+HRDL P N+L G +K+ DFGL++I YSY+M + Y APEV
Sbjct: 132 --CIVHRDLKPENILVTSGGTVKLADFGLARI------YSYQMALFPVVVTLWYRAPEVL 183
Query: 268 RRESYGKSVDVFSFALIVHEMFQGGP 293
+ +Y VD++S I EMF+ P
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 15/196 (7%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 157 VLKHSERLIFLTEYLRNG--SLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
V+ +L + E++ + D G + P +Y + +G+ + H HR ++
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHR---VL 124
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
HRDL P N+L + G +K+ DFGL++ +Y++++ + Y APE+ + Y
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEILLGCKYY 180
Query: 273 GKSVDVFSFALIVHEM 288
+VD++S I EM
Sbjct: 181 STAVDIWSLGCIFAEM 196
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 12/222 (5%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFLG--VLKHSERLIFLTEYLRNGSLHDILKKKGK----L 186
+ + E+ L ++L+HPNIV++ + + + L + EY G L ++ K K L
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 187 DPPTAVAYALDIARGMNYLHHHRP--HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQE 244
D + + + H H ++HRDL P+NV D ++K+ DFGL++I
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 245 KDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVA 304
S++ G+ YM+PE R SY + D++S +++E+ P A + ++A
Sbjct: 169 DTSFAKTF---VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
Query: 305 DRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+ E + Y + + ++ + RP+ EEI+
Sbjct: 226 G-KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 70
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV--AYALDIARGMNYLHHHRPHAII 214
V+ +L + E+L + L + P + +Y + +G+ + H HR ++
Sbjct: 71 VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 126
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+ + Y
Sbjct: 127 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLGCKYY 182
Query: 273 GKSVDVFSFALIVHEM 288
+VD++S I EM
Sbjct: 183 STAVDIWSLGCIFAEM 198
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV--AYALDIARGMNYLHHHRPHAII 214
V+ +L + E+L + L + P + +Y + +G+ + H HR ++
Sbjct: 73 VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 128
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+ + Y
Sbjct: 129 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLGCKYY 184
Query: 273 GKSVDVFSFALIVHEM 288
+VD++S I EM
Sbjct: 185 STAVDIWSLGCIFAEM 200
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 20/265 (7%)
Query: 89 ICKILEDRGGIDPGAYGEVYLVK--WRGTEIAAKTI-RSSIASN-PRVRNSFMKELGLWQ 144
+ K E I G + +V L G +A K + ++++ S+ PR++ E+ +
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT----EIEALK 63
Query: 145 KLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNY 204
LRH +I Q VL+ + ++ + EY G L D + + +L I + Y
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAY 123
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
+H HRDL P N+L DE LK+ DFGL A+ K + Y + GS Y AP
Sbjct: 124 VH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLC--AKPKGNKDYHLQTCCGSLAYAAP 178
Query: 265 EVYRRESY-GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADR--RAYEDSRPALSSLYP 321
E+ + +SY G DV+S ++++ + G D + + + R D LS P
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLS---P 235
Query: 322 EPIKALLRECWHKNPDRRPTFEEII 346
I LL++ +P +R + + ++
Sbjct: 236 SSI-LLLQQMLQVDPKKRISMKNLL 259
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
DS+G L Y + +G + V + KG + N D D RT LH A+ EG EIV LL+ KG
Sbjct: 67 DSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKG 126
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGG 98
ADVN+ D GRTPL AR G+ I K+LE +GG
Sbjct: 127 ADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 54/92 (58%)
Query: 6 SEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGA 65
SE RL+ + G++ V +E G + N +D D RT LH A+ EG EIV LL+ KGA
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGA 61
Query: 66 DVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
DVN+ D GRTPL A GH I K+L +G
Sbjct: 62 DVNAKDSDGRTPLHYAAKEGHKEIVKLLISKG 93
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 54/93 (58%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
DS+G L Y + +G + V + KG + N D D RT LH A+ EG EIV LL+ KG
Sbjct: 34 DSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKG 93
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
ADVN+ D GRTPL A GH I K+L +G
Sbjct: 94 ADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKG 126
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 192 VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
++Y+ +ARGM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 202 ISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 252 MTGGTG-SYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADR 306
G T ++MAPE + Y DV+S+ +++ E+F G P + D R
Sbjct: 259 --GDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLR 316
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFRL 349
P S+ PE I ++ +CWH++P RP F E++ +L
Sbjct: 317 EGMRMRAPEYST--PE-IYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 102 GAYGEVYLVKWRGTE-------IAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V G + +A K ++ ++ + M EL + + H N+V
Sbjct: 38 GAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEY--KALMTELKILTHIGHHLNVVN 95
Query: 154 FLGVL-KHSERLIFLTEYLRNGSLHDILKKKGKL 186
LG K L+ + EY + G+L + LK K L
Sbjct: 96 LLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDL 129
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFL----GVLKHSERLIFLTEYLRNGSLHDILKKKGKLDP 188
R F +E + L+HPNIV+F +K + ++ +TE +G+L LK+
Sbjct: 69 RQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI 128
Query: 189 PTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNV-LQDEAGHLKVTDFGLSKIAQEKDS 247
++ I +G+ +LH P IIHRDL N+ + G +K+ D GL+ + ++ S
Sbjct: 129 KVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRAS 185
Query: 248 YSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGG-PSNRADTAVQVADR 306
++ + G+ + APE Y E Y +SVDV++F E P + A Q+ R
Sbjct: 186 FAKAV---IGTPEFXAPEXY-EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIY-R 240
Query: 307 RAYEDSRPALSSLYPEP-IKALLRECWHKNPDRRPTFEEII 346
R +PA P +K ++ C +N D R + ++++
Sbjct: 241 RVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 12/222 (5%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFLG--VLKHSERLIFLTEYLRNGSLHDILKKKGK----L 186
+ + E+ L ++L+HPNIV++ + + + L + EY G L ++ K K L
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 187 DPPTAVAYALDIARGMNYLHHHRP--HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQE 244
D + + + H H ++HRDL P+NV D ++K+ DFGL++I
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 245 KDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVA 304
+ ++ + G+ YM+PE R SY + D++S +++E+ P A + ++A
Sbjct: 169 DEDFAKEF---VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
Query: 305 DRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+ E + Y + + ++ + RP+ EEI+
Sbjct: 226 G-KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 102 GAYGEVYLVKWR-GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKH 160
G +G+VY + G +A K ++ ++ F E+ + H N+++ G
Sbjct: 41 GGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRNLLRLRGFCMT 98
Query: 161 SERLIFLTEYLRNGSLHDILKKKGK----LDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ + Y+ NGS+ L+++ + LD P AL ARG+ YLH H IIHR
Sbjct: 99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR 158
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
D+ +N+L DE V DFGL+K+ KD + G ++APE +
Sbjct: 159 DVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV--RGXIGHIAPEYLSTGKSSEKT 216
Query: 277 DVFSFALIVHEMFQG 291
DVF + +++ E+ G
Sbjct: 217 DVFGYGVMLLELITG 231
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKSQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL + + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDSELKILDFGLCRHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G E AAK I+ S+ R R +E+ + +++RHPNI+ + ++ ++ +
Sbjct: 34 KGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLI 93
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G++YLH R I H DL P N++ +
Sbjct: 94 LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLD 150
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFG++ + + + G+ ++APE+ E G D++S +
Sbjct: 151 KNVPNPRIKLIDFGIAHKIEAGNEFKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 284 IVHEMFQGGPSNRADTAVQVADRRA---YEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
I + + G +T + + Y+ S+ E K +R K+P RR
Sbjct: 207 ITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT-SELAKDFIRRLLVKDPKRR 264
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGXVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 16/243 (6%)
Query: 111 KWRGTEIAAKTI--RSSIASNPRV-RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G E AAK I R S AS V R +E+ + +++ H N++ V ++ ++ +
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLI 93
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A ++ I G+NYLH + I H DL P N++ +
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLD 150
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
H+K+ DFGL+ + +D +K GT ++APE+ E G D++S +
Sbjct: 151 KNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGV 206
Query: 284 IVHEMFQGGPSNRADTAVQ-VADRRAYE-DSRPALSSLYPEPIKALLRECWHKNPDRRPT 341
I + + G DT + +A+ + D S E K +R+ K +R T
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLT 266
Query: 342 FEE 344
+E
Sbjct: 267 IQE 269
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 14/196 (7%)
Query: 111 KWRGTEIAAKTI--RSSIASNPRV-RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G E AAK I R S AS V R +E+ + +++ H N++ V ++ ++ +
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLI 93
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A ++ I G+NYLH + I H DL P N++ +
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLD 150
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
H+K+ DFGL+ + +D +K GT ++APE+ E G D++S +
Sbjct: 151 KNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGV 206
Query: 284 IVHEMFQGGPSNRADT 299
I + + G DT
Sbjct: 207 ITYILLSGASPFLGDT 222
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 192 VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
+ Y+ +A+GM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 194 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYE 310
++MAPE Y DV+SF +++ E+F G S + + RR E
Sbjct: 251 GDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 309
Query: 311 DSRP-ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+R A PE + +L +CWH P +RPTF E++
Sbjct: 310 GTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELV 345
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 192 VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
+ Y+ +A+GM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 196 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYE 310
++MAPE Y DV+SF +++ E+F G S + + RR E
Sbjct: 253 GDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 311
Query: 311 DSRP-ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+R A PE + +L +CWH P +RPTF E++
Sbjct: 312 GTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELV 347
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 192 VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
+ Y+ +A+GM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 203 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYE 310
++MAPE Y DV+SF +++ E+F G S + + RR E
Sbjct: 260 GDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 318
Query: 311 DSRP-ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+R A PE + +L +CWH P +RPTF E++
Sbjct: 319 GTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELV 354
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 192 VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
+ Y+ +A+GM +L + IHRDL N+L E +K+ DFGL++ + Y K
Sbjct: 201 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVADRRAYE 310
++MAPE Y DV+SF +++ E+F G S + + RR E
Sbjct: 258 GDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 316
Query: 311 DSRP-ALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+R A PE + +L +CWH P +RPTF E++
Sbjct: 317 GTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELV 352
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 93
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 149
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 150 HRDLKPSNLAVNEDSELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 203
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 204 QTVDIWSVGCIMAELLTG 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRE-SYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNAMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 97
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 153
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 154 HRDLKPSNLAVNEDSELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 207
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 208 QTVDIWSVGCIMAELLTG 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 21/199 (10%)
Query: 102 GAYGEV---YLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
GAYG V + K G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVF 90
Query: 159 KHSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAI 213
+ L ++L +L L++I+K + KL I RG+ Y+H I
Sbjct: 91 TPARSLEEFNDVYLVTHLMGADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHSAD---I 146
Query: 214 IHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
IHRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHY 200
Query: 273 GKSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 201 NQTVDIWSVGCIMAELLTG 219
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 14/196 (7%)
Query: 111 KWRGTEIAAKTI--RSSIASNPRV-RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G E AAK I R S AS V R +E+ + +++ H N++ V ++ ++ +
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLI 93
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A ++ I G+NYLH + I H DL P N++ +
Sbjct: 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLD 150
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
H+K+ DFGL+ + +D +K GT ++APE+ E G D++S +
Sbjct: 151 KNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGV 206
Query: 284 IVHEMFQGGPSNRADT 299
I + + G DT
Sbjct: 207 ITYILLSGASPFLGDT 222
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I GAYG V G +A K + S + ++ +EL L + ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 157 VLKHSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPH 211
V + L ++L +L L++I+K + KL I RG+ Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD-- 150
Query: 212 AIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-E 270
IIHRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+
Sbjct: 151 -IIHRDLKPSNLAVNEDXELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWM 203
Query: 271 SYGKSVDVFSFALIVHEMFQG 291
Y ++VD++S I+ E+ G
Sbjct: 204 HYNQTVDIWSVGCIMAELLTG 224
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 32/234 (13%)
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA-------VAYALDIA 199
RHP++V +G +I + +Y+ NG+L L D PT + + A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS---DLPTMSMSWEQRLEICIGAA 149
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY 259
RG++YLH AIIHRD+ N+L DE K+TDFG+SK E D ++ G+
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ-THLXXVVKGTL 205
Query: 260 RYMAPEVYRRESYGKSVDVFSFALIVHEMF-------QGGPS---NRADTAVQVADRRAY 309
Y+ PE + + + DV+SF +++ E+ Q P N A+ AV+ +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 310 ED-SRPALSS-LYPEPIKAL---LRECWHKNPDRRPTFEEIIFRLE---AIQES 355
E P L+ + PE ++ +C + + RP+ +++++LE +QES
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 103
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 104 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 159
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 213
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 214 QTVDIWSVGCIMAELLTG 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 114
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 115 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 170
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 224
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 225 QTVDIWSVGCIMAELLTG 242
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 97
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 153
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 207
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 208 QTVDIWSVGCIMAELLTG 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 88
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 89 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 144
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 198
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 199 QTVDIWSVGCIMAELLTG 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 93
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 149
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 203
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 204 QTVDIWSVGCIMAELLTG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 52 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 110
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 111 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 166
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 220
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 221 QTVDIWSVGCIMAELLTG 238
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 88
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 89 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 144
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 198
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 199 QTVDIWSVGCIMAELLTG 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 98
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 154
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 208
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 209 QTVDIWSVGCIMAELLTG 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 96
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 152
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 206
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 207 QTVDIWSVGCIMAELLTG 224
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 53 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 111
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 112 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 167
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 221
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 222 QTVDIWSVGCIMAELLTG 239
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 32 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 90
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 91 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 146
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 147 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 200
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 201 QTVDIWSVGCIMAELLTG 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 102
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 103 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 158
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 159 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 212
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 213 QTVDIWSVGCIMAELLTG 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 93
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 149
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 203
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 204 QTVDIWSVGCIMAELLTG 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 93
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 149
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 203
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 204 QTVDIWSVGCIMAELLTG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 103
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 104 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 159
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 213
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 214 QTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 103
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 104 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 159
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 213
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 214 QTVDIWSVGCIMAELLTG 231
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 31 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 89
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 90 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 145
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 146 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 199
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 200 QTVDIWSVGCIMAELLTG 217
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 99 IDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG VY K G +A K IR + V ++ ++E+ L ++L HPNIV+ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 72
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV--AYALDIARGMNYLHHHRPHAII 214
V+ H+E ++L + L + P + +Y + +G+ + H HR ++
Sbjct: 73 VI-HTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 128
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESY 272
HRDL P N+L + G +K+ DFGL++ +Y +++ + Y APE+ + Y
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEILLGCKYY 184
Query: 273 GKSVDVFSFALIVHEM 288
+VD++S I EM
Sbjct: 185 STAVDIWSLGCIFAEM 200
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 98
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 154
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTAD------EMTGYVATRWYRAPEIMLNWMHYN 208
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 209 QTVDIWSVGCIMAELLTG 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 96
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 152
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 206
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 207 QTVDIWSVGCIMAELLTG 224
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 87
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 143
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 197
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 198 QTVDIWSVGCIMAELLTG 215
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 96
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 152
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 206
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 207 QTVDIWSVGCIMAELLTG 224
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 102
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 103 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 158
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 159 HRDLKPSNLAVNEDXELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 212
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 213 QTVDIWSVGCIMAELLTG 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 98
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 154
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTAD------EMTGYVATRWYRAPEIMLNWMHYN 208
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 209 QTVDIWSVGCIMAELLTG 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 98
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 154
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTAD------EMTGYVATRWYRAPEIMLNWMHYN 208
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 209 QTVDIWSVGCIMAELLTG 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 97
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 153
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 207
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 208 QTVDIWSVGCIMAELLTG 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 52 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 110
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 111 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 166
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 220
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 221 QTVDIWSVGCIMAELLTG 238
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 94 EDRGGIDPGAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNI 151
++ + GAYG V G +A K + S + ++ +EL L + ++H N+
Sbjct: 35 QNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENV 93
Query: 152 VQFLGVLKHSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
+ L V + L ++L +L L++I+K + KL I RG+ Y+H
Sbjct: 94 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH 152
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEV 266
IIHRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+
Sbjct: 153 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEI 203
Query: 267 YRR-ESYGKSVDVFSFALIVHEMFQG 291
Y ++VD++S I+ E+ G
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 111
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 112 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 167
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 221
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 222 QTVDIWSVGCIMAELLTG 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 87
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 143
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 197
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 198 QTVDIWSVGCIMAELLTG 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
+HPNI+ V + + +TE +R G L D + ++ A I + + YLH
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 207 HHRPHAIIHRDLTPSNVLQ-DEAGH---LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYM 262
++HRDL PSN+L DE+G+ L++ DFG +K + ++ + + ++
Sbjct: 139 ---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LMTPCYTANFV 192
Query: 263 APEVYRRESYGKSVDVFSFALIVHEM------FQGGPSNRADTAVQVADRRAYEDSRPAL 316
APEV +R+ Y + D++S ++++ M F GPS+ + + + S
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNW 252
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+++ E K L+ + H +P +R T ++++
Sbjct: 253 NTV-SETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 87
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K KL I RG+ Y+H II
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIVKC-AKLTDDHVQFLIYQILRGLKYIHSAD---II 143
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 197
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 198 QTVDIWSVGCIMAELLTG 215
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 39 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 97
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 153
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +MTG + Y APE+ Y
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 207
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 208 QTVDIWSVGCIMAELLTG 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
+HPNI+ V + + +TE +R G L D + ++ A I + + YLH
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 207 HHRPHAIIHRDLTPSNVLQ-DEAGH---LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYM 262
++HRDL PSN+L DE+G+ L++ DFG +K + ++ + + ++
Sbjct: 139 S---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LMTPCYTANFV 192
Query: 263 APEVYRRESYGKSVDVFSFALIVHEM------FQGGPSNRADTAVQVADRRAYEDSRPAL 316
APEV +R+ Y + D++S ++++ M F GPS+ + + + S
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNW 252
Query: 317 SSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+++ E K L+ + H +P +R T ++++
Sbjct: 253 NTV-SETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 19/232 (8%)
Query: 99 IDPGAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG V+ K R T +A K +R + V +S ++E+ L ++L+H NIV+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLD-DDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
VL ++L + E+ G LDP ++ + +G+ + H ++HR
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHR 125
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEV-YRRESYGK 274
DL P N+L + G LK+ +FGL++ YS ++ + Y P+V + + Y
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV----TLWYRPPDVLFGAKLYST 181
Query: 275 SVDVFSFALIVHEMFQGG----PSNRADTAVQVADR---RAYEDSRPALSSL 319
S+D++S I E+ G P N D ++ R E+ P+++ L
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G E AAK I+ + R R +E+ + +++RHPNI+ + ++ ++ +
Sbjct: 48 KGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLI 107
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G++YLH R I H DL P N++ +
Sbjct: 108 LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLD 164
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFG++ + + + G+ ++APE+ E G D++S +
Sbjct: 165 KNVPNPRIKLIDFGIAHKIEAGNEFKNIF----GTPEFVAPEIVNYEPLGLEADMWSIGV 220
Query: 284 IVHEMFQGGPSNRADTAVQVADRRA---YEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
I + + G +T + + Y+ S+ E K +R K+P RR
Sbjct: 221 ITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT-SELAKDFIRRLLVKDPKRR 278
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ D+GL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDYGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 99 IDPGAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G YG V+ K R T +A K +R + V +S ++E+ L ++L+H NIV+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLD-DDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
VL ++L + E+ G LDP ++ + +G+ + H ++HR
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHR 125
Query: 217 DLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEV-YRRESYGK 274
DL P N+L + G LK+ DFGL++ YS ++ + Y P+V + + Y
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV----TLWYRPPDVLFGAKLYST 181
Query: 275 SVDVFSFALIVHEMFQGG----PSNRADTAVQVADR---RAYEDSRPALSSL 319
S+D++S I E+ P N D ++ R E+ P+++ L
Sbjct: 182 SIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 32 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 91
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 92 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 148
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 149 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 205 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 261
Query: 339 RPTFEE 344
R T ++
Sbjct: 262 RMTIQD 267
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 22/263 (8%)
Query: 92 ILEDRGGIDPGAYGEVY--LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
ILE+ G GA+G V+ + K G AK I + P + + E+ + +L HP
Sbjct: 55 ILEELGS---GAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHP 108
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHD-ILKKKGKLDPPTAVAYALDIARGMNYLHHH 208
++ + ++ + E+L G L D I + K+ + Y G+ ++H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE- 167
Query: 209 RPHAIIHRDLTPSNVLQD--EAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEV 266
H+I+H D+ P N++ + +A +K+ DFGL+ + K+T T + APE+
Sbjct: 168 --HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--IVKVTTATA--EFAAPEI 221
Query: 267 YRRESYGKSVDVFSFALIVHEMFQG-GPSNRAD--TAVQVADRRAYEDSRPALSSLYPEP 323
RE G D+++ ++ + + G P D +Q R +E A SS+ PE
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE- 280
Query: 324 IKALLRECWHKNPDRRPTFEEII 346
K ++ K P +R T + +
Sbjct: 281 AKDFIKNLLQKEPRKRLTVHDAL 303
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIR-------SSIASNPRVRNSFMKELGLWQKLRHPNIV 152
GA GEV L R T ++A K I S+ ++P + + E+ + +KL HP I+
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLNHPCII 78
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+ + I L E + G L D + +L T Y + + YLH +
Sbjct: 79 KIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---G 134
Query: 213 IIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
IIHRDL P NVL Q+E +K+TDFG SKI E + M G+ Y+APEV
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVS 190
Query: 270 ---ESYGKSVDVFSFALIVHEMFQGGP 293
Y ++VD +S +I+ G P
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYP 217
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 14/237 (5%)
Query: 116 EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGS 175
E AAK I + S R +E + + L+HPNIV+ + + + + G
Sbjct: 58 EYAAKIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 116
Query: 176 LHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLK 232
L + + + A I +N++H H I+HRDL P N+L + + +K
Sbjct: 117 LFEDIVAREYYSEADASHCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVK 173
Query: 233 VTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGG 292
+ DFGL+ Q + + G G Y++PEV R++ YGK VD+++ +I++ + G
Sbjct: 174 LADFGLAIEVQGEQQAWFGFAGTPG---YLSPEVLRKDPYGKPVDIWACGVILYILLVGY 230
Query: 293 P---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
P Q AY+ P ++ PE K L+ + NP +R T ++ +
Sbjct: 231 PPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA-KNLINQMLTINPAKRITADQAL 286
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 32 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 91
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 92 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 148
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 149 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 205 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 261
Query: 339 RPTFEE 344
R T ++
Sbjct: 262 RMTIQD 267
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + ++L +L L+ +LK + L + I RG+ Y+H ++
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 166
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 167 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 227 KSIDIWSVGCILAEMLSNRP 246
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 GELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIR-------SSIASNPRVRNSFMKELGLWQKLRHPNIV 152
GA GEV L R T ++A K I S+ ++P + + E+ + +KL HP I+
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLNHPCII 78
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+ + I L E + G L D + +L T Y + + YLH +
Sbjct: 79 KIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---G 134
Query: 213 IIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
IIHRDL P NVL Q+E +K+TDFG SKI E + M G+ Y+APEV
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVS 190
Query: 270 ---ESYGKSVDVFSFALIVHEMFQGGP 293
Y ++VD +S +I+ G P
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYP 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIR-------SSIASNPRVRNSFMKELGLWQKLRHPNIV 152
GA GEV L R T ++A K I S+ ++P + + E+ + +KL HP I+
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLNHPCII 78
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+ + I L E + G L D + +L T Y + + YLH +
Sbjct: 79 KIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---G 134
Query: 213 IIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
IIHRDL P NVL Q+E +K+TDFG SKI E + M G+ Y+APEV
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVS 190
Query: 270 ---ESYGKSVDVFSFALIVHEMFQGGP 293
Y ++VD +S +I+ G P
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYP 217
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 30/256 (11%)
Query: 102 GAYGEVYLVKW-----RGTEIAAKTIR-SSIASNPRVRNSFMKELGLWQKLRH-PNIVQF 154
GAYG+V+LV+ G A K ++ ++I + E + + +R P +V
Sbjct: 65 GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL 124
Query: 155 LGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ +L + +Y+ G L L ++ + Y +I + +LH II
Sbjct: 125 HYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGII 181
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSK--IAQEKD-SYSYKMTGGTGSYRYMAPEVYRRES 271
+RD+ N+L D GH+ +TDFGLSK +A E + +Y + G+ YMAP++ R
Sbjct: 182 YRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF-----CGTIEYMAPDIVRGGD 236
Query: 272 YG--KSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEP------ 323
G K+VD +S ++++E+ G D E SR L S P P
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASPFTVDG----EKNSQAEISRRILKSEPPYPQEMSAL 292
Query: 324 IKALLRECWHKNPDRR 339
K L++ K+P +R
Sbjct: 293 AKDLIQRLLMKDPKKR 308
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIR-------SSIASNPRVRNSFMKELGLWQKLRHPNIV 152
GA GEV L R T ++A K I S+ ++P + + E+ + +KL HP I+
Sbjct: 20 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLNHPCII 77
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+ + I L E + G L D + +L T Y + + YLH +
Sbjct: 78 KIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---G 133
Query: 213 IIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
IIHRDL P NVL Q+E +K+TDFG SKI E + M G+ Y+APEV
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVS 189
Query: 270 ---ESYGKSVDVFSFALIVHEMFQGGP 293
Y ++VD +S +I+ G P
Sbjct: 190 VGTAGYNRAVDCWSLGVILFICLSGYP 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFM-KELGLWQKLRHPNIVQFLGVLK 159
GA+GEV LV+ + T ++ A + S R ++F +E + P +VQ +
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 144
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
L + EY+ G L +++ D P A Y ++ ++ +H IHRD
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRD 198
Query: 218 LTPSNVLQDEAGHLKVTDFGLS-KIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES----Y 272
+ P N+L D++GHLK+ DFG K+ +E + G+ Y++PEV + + Y
Sbjct: 199 VKPDNMLLDKSGHLKLADFGTCMKMNKEG---MVRCDTAVGTPDYISPEVLKSQGGDGYY 255
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAV 301
G+ D +S + ++EM G AD+ V
Sbjct: 256 GRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIR-------SSIASNPRVRNSFMKELGLWQKLRHPNIV 152
GA GEV L R T ++A K I S+ ++P + + E+ + +KL HP I+
Sbjct: 27 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLNHPCII 84
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+ + I L E + G L D + +L T Y + + YLH +
Sbjct: 85 KIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---G 140
Query: 213 IIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
IIHRDL P NVL Q+E +K+TDFG SKI E + M G+ Y+APEV
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVS 196
Query: 270 ---ESYGKSVDVFSFALIVHEMFQGGP 293
Y ++VD +S +I+ G P
Sbjct: 197 VGTAGYNRAVDCWSLGVILFICLSGYP 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFM-KELGLWQKLRHPNIVQFLGVLK 159
GA+GEV LV+ + T ++ A + S R ++F +E + P +VQ +
Sbjct: 80 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 139
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
L + EY+ G L +++ D P A Y ++ ++ +H IHRD
Sbjct: 140 DDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRD 193
Query: 218 LTPSNVLQDEAGHLKVTDFGLS-KIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES----Y 272
+ P N+L D++GHLK+ DFG K+ +E + G+ Y++PEV + + Y
Sbjct: 194 VKPDNMLLDKSGHLKLADFGTCMKMNKEG---MVRCDTAVGTPDYISPEVLKSQGGDGYY 250
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAV 301
G+ D +S + ++EM G AD+ V
Sbjct: 251 GRECDWWSVGVFLYEMLVGDTPFYADSLV 279
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPR---VRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFL 167
K G + AAK I+ + R R +E+ + ++++HPN++ V ++ +I +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
E + G L D L +K L A + I G+ YLH + I H DL P N++ +
Sbjct: 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLD 149
Query: 228 AG----HLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFAL 283
+K+ DFGL+ K + + G+ ++APE+ E G D++S +
Sbjct: 150 RNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGV 205
Query: 284 IVHEMFQGGPSNRADTAVQV-----ADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
I + + G DT + A +ED + +S K +R K+P +
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA---KDFIRRLLVKDPKK 262
Query: 339 RPTFEE 344
R T ++
Sbjct: 263 RMTIQD 268
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 111
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 112 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 167
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +M G + Y APE+ Y
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMXGXVATRWYRAPEIMLNWMHYN 221
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 222 QTVDIWSVGCIMAELLTG 239
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFM-KELGLWQKLRHPNIVQFLGVLK 159
GA+GEV LV+ + T ++ A + S R ++F +E + P +VQ +
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 144
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
L + EY+ G L +++ D P A Y ++ ++ +H IHRD
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRD 198
Query: 218 LTPSNVLQDEAGHLKVTDFGLS-KIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES----Y 272
+ P N+L D++GHLK+ DFG K+ +E + G+ Y++PEV + + Y
Sbjct: 199 VKPDNMLLDKSGHLKLADFGTCMKMNKEG---MVRCDTAVGTPDYISPEVLKSQGGDGYY 255
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAV 301
G+ D +S + ++EM G AD+ V
Sbjct: 256 GRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +M G + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMAGFVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +M G + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMAGFVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRH 148
+I+E G GAYG V + R G ++A K I ++ + + ++EL + + +H
Sbjct: 58 EIIETIGN---GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELKILKHFKH 113
Query: 149 PNIVQFLGVLKHSE-----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMN 203
NI+ +L+ + + +++ L LH I+ L + + RG+
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 173
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYM 262
Y+H + +IHRDL PSN+L +E LK+ DFG+++ + + Y MT + Y
Sbjct: 174 YMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 263 APEVY-RRESYGKSVDVFSFALIVHEMF 289
APE+ Y +++D++S I EM
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEML 258
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 87
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 143
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +M G + Y APE+ Y
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMAGFVATRWYRAPEIMLNWMHYN 197
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 198 QTVDIWSVGCIMAELLTG 215
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 114
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 115 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 170
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DFGL++ + +M G + Y APE+ Y
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLARHTDD------EMXGYVATRWYRAPEIMLNWMHYN 224
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 225 QTVDIWSVGCIMAELLTG 242
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 32/234 (13%)
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTA-------VAYALDIA 199
RHP++V +G +I + +Y+ NG+L L D PT + + A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS---DLPTMSMSWEQRLEICIGAA 149
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSY 259
RG++YLH AIIHRD+ N+L DE K+TDFG+SK E ++ G+
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQ-THLXXVVKGTL 205
Query: 260 RYMAPEVYRRESYGKSVDVFSFALIVHEMF-------QGGPS---NRADTAVQVADRRAY 309
Y+ PE + + + DV+SF +++ E+ Q P N A+ AV+ +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 310 ED-SRPALS-SLYPEPIKAL---LRECWHKNPDRRPTFEEIIFRLE---AIQES 355
E P L+ + PE ++ +C + + RP+ +++++LE +QES
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 99 IDPGAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G +G L++ + T+ +A K I A + V+ +E+ + LRHPNIV+F
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ----REIINHRSLRHPNIVRFKE 83
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
V+ L + EY G L++ + G+ A + + G++Y H + I HR
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHR 140
Query: 217 DLTPSNVLQD--EAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY-G 273
DL N L D A LK+ DFG SK + G+ Y+APEV R+ Y G
Sbjct: 141 DLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLLRQEYDG 196
Query: 274 KSVDVFSFALIVHEMFQGG 292
K DV+S + ++ M G
Sbjct: 197 KIADVWSCGVTLYVMLVGA 215
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 90 CKILEDRGGIDPGAYGEVYLVKW----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
C E + + G +G Y+++W G ++A K R ++ P+ R + E+ + +K
Sbjct: 14 CGPWEMKERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQELS--PKNRERWCLEIQIMKK 69
Query: 146 LRHPNIVQFLGVLKHSERL------IFLTEYLRNGSLHDILKK----KGKLDPPTAVAYA 195
L HPN+V V ++L + EY G L L + G + P +
Sbjct: 70 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSN-VLQDEAGHL--KVTDFGLSKIAQEKDSYSYKM 252
DI+ + YLH +R IIHRDL P N VLQ L K+ D G +K E D
Sbjct: 130 -DISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGEL-C 181
Query: 253 TGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
T G+ +Y+APE+ ++ Y +VD +SF + E G
Sbjct: 182 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 90 CKILEDRGGIDPGAYGEVYLVKW----RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK 145
C E + + G +G Y+++W G ++A K R ++ P+ R + E+ + +K
Sbjct: 13 CGPWEMKERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQELS--PKNRERWCLEIQIMKK 68
Query: 146 LRHPNIVQFLGVLKHSERL------IFLTEYLRNGSLHDILKK----KGKLDPPTAVAYA 195
L HPN+V V ++L + EY G L L + G + P +
Sbjct: 69 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 196 LDIARGMNYLHHHRPHAIIHRDLTPSN-VLQDEAGHL--KVTDFGLSKIAQEKDSYSYKM 252
DI+ + YLH +R IIHRDL P N VLQ L K+ D G +K E D
Sbjct: 129 -DISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGEL-C 180
Query: 253 TGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
T G+ +Y+APE+ ++ Y +VD +SF + E G
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 119/252 (47%), Gaps = 12/252 (4%)
Query: 99 IDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G++G+ LVK G + K I S S+ + R +E+ + ++HPNIVQ+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRE 90
Query: 157 VLKHSERLIFLTEYLRNGSLHD-ILKKKGKL-DPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + L + +Y G L I +KG L + + + I + ++H + I+
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---IL 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGK 274
HRD+ N+ + G +++ DFG++++ +S G+ Y++PE+ + Y
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVELARACIGTPYYLSPEICENKPYNN 204
Query: 275 SVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHK 334
D+++ +++E+ + A + + + S P +S Y +++L+ + + +
Sbjct: 205 KSDIWALGCVLYELCTLKHAFEAGSMKNLV-LKIISGSFPPVSLHYSYDLRSLVSQLFKR 263
Query: 335 NPDRRPTFEEII 346
NP RP+ I+
Sbjct: 264 NPRDRPSVNSIL 275
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
DS+G L + G + V L +G +PN D D +T LHLA+ G E+V LLL +G
Sbjct: 67 DSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQG 126
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGG 98
AD N+ D GRTPL AR G+ + K+LE +GG
Sbjct: 127 ADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 6 SEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGA 65
SE RL+ + G++ V LE G + N +D D +T LHLA+ G E+V LLL +GA
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGA 61
Query: 66 DVNSLDRWGRTPLSDARSFGHVVICKILEDRGGIDPGA 103
D N+ D G+TPL A GH + K+L + G DP A
Sbjct: 62 DPNAKDSDGKTPLHLAAENGHKEVVKLLLSQ-GADPNA 98
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
DS+G L + G + V L +G +PN D D +T LHLA+ G E+V LLL +G
Sbjct: 34 DSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQG 93
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGGIDP 101
AD N+ D G+TPL A GH + K+L + G DP
Sbjct: 94 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQ-GADP 129
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 91 KILEDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRH 148
+I+E G GAYG V + R G ++A K I ++ + + ++EL + + +H
Sbjct: 57 EIIETIGN---GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELKILKHFKH 112
Query: 149 PNIVQFLGVLKHSE-----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMN 203
NI+ +L+ + + +++ L LH I+ L + + RG+
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 172
Query: 204 YLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYM 262
Y+H + +IHRDL PSN+L +E LK+ DFG+++ + + Y MT + Y
Sbjct: 173 YMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 263 APEVY-RRESYGKSVDVFSFALIVHEMF 289
APE+ Y +++D++S I EM
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEML 257
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 102 GAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNSFM-KELGLWQKLRHPNIVQFLGVLK 159
GA+GEV LV+ + ++ + A + S R ++F +E + P +VQ +
Sbjct: 86 GAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ 145
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVA--YALDIARGMNYLHHHRPHAIIHRD 217
+ L + EY+ G L +++ D P A Y ++ ++ +H +IHRD
Sbjct: 146 DDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRD 199
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES----YG 273
+ P N+L D+ GHLK+ DFG E GT Y++PEV + + YG
Sbjct: 200 VKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD--YISPEVLKSQGGDGYYG 257
Query: 274 KSVDVFSFALIVHEMFQGGPSNRADTAV 301
+ D +S + + EM G AD+ V
Sbjct: 258 RECDWWSVGVFLFEMLVGDTPFYADSLV 285
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ FGL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILGFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 21/252 (8%)
Query: 115 TEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSE---RL---IFLT 168
++A K +++ I ++ + F++E ++ HP++ + +GV S RL + +
Sbjct: 52 VKVAVKMLKADIIASSDIEE-FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVIL 110
Query: 169 EYLRNGSLHDIL------KKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSN 222
++++G LH L + L T V + +DIA GM YL IHRDL N
Sbjct: 111 PFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARN 167
Query: 223 VLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFA 282
+ E + V DFGLS+ D Y + +++A E Y DV++F
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYR-QGCASKLPVKWLALESLADNLYTVHSDVWAFG 226
Query: 283 LIVHEMFQGGPSNRADTAVQVADRRAY--EDSRPALSSLYPEPIKALLRECWHKNPDRRP 340
+ + E+ G + A ++ A+ Y +R E + L+ +CW +P +RP
Sbjct: 227 VTMWEIMTRGQTPYA--GIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRP 284
Query: 341 TFEEIIFRLEAI 352
+F + LE I
Sbjct: 285 SFTCLRMELENI 296
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 154
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 215 KSIDIWSVGCILAEMLSNRP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 146
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 207 KSIDIWSVGCILAEMLSNRP 226
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIR-------SSIASNPRVRNSFMKELGLWQKLRHPNIV 152
GA GEV L R T ++A + I S+ ++P + + E+ + +KL HP I+
Sbjct: 146 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--NVETEIEILKKLNHPCII 203
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+ + I L E + G L D + +L T Y + + YLH +
Sbjct: 204 KIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---G 259
Query: 213 IIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
IIHRDL P NVL Q+E +K+TDFG SKI E + M G+ Y+APEV
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVS 315
Query: 270 ---ESYGKSVDVFSFALIVHEMFQGGP 293
Y ++VD +S +I+ G P
Sbjct: 316 VGTAGYNRAVDCWSLGVILFICLSGYP 342
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 211 KSIDIWSVGCILAEMLSNRP 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 146
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 207 KSIDIWSVGCILAEMLSNRP 226
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIR-------SSIASNPRVRNSFMKELGLWQKLRHPNIV 152
GA GEV L R T ++A + I S+ ++P + + E+ + +KL HP I+
Sbjct: 160 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--NVETEIEILKKLNHPCII 217
Query: 153 QFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
+ + I L E + G L D + +L T Y + + YLH +
Sbjct: 218 KIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---G 273
Query: 213 IIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
IIHRDL P NVL Q+E +K+TDFG SKI E + M G+ Y+APEV
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVS 329
Query: 270 ---ESYGKSVDVFSFALIVHEMFQGGP 293
Y ++VD +S +I+ G P
Sbjct: 330 VGTAGYNRAVDCWSLGVILFICLSGYP 356
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ D GL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDAGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 102 GAYGEV-----YLVKWRGT--EIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQ 153
GA+G+V Y + G ++A K ++ S+ R + M EL + +L H NIV
Sbjct: 56 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER--EALMSELKMMTQLGSHENIVN 113
Query: 154 FLGVLKHSERLIFLTEYLRNGSLHDILKKKGK-----------------------LDPPT 190
LG S + + EY G L + L+ K + L
Sbjct: 114 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFED 173
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSY 250
+ +A +A+GM +L + +HRDL NVL +K+ DFGL++ +Y
Sbjct: 174 LLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV 230
Query: 251 KMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGG----PSNRADTAVQVADR 306
+ ++MAPE Y DV+S+ +++ E+F G P D +
Sbjct: 231 R-GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ 289
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTF 342
++ +P ++ E I +++ CW + +RP+F
Sbjct: 290 NGFKMDQPFYAT---EEIYIIMQSCWAFDSRKRPSF 322
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 148
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 209 KSIDIWSVGCILAEMLSNRP 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 166
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 227 KSIDIWSVGCILAEMLSNRP 246
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 91 KILEDRGGIDPGAYGEVY--LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRH 148
K LE G G Y VY L K G +A K ++ + S ++ ++E+ L ++L+H
Sbjct: 8 KQLEKLGN---GTYATVYKGLNKTTGVYVALKEVK--LDSEEGTPSTAIREISLMKELKH 62
Query: 149 PNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL------DIARGM 202
NIV+ V+ +L + E++ N L + + + P + L + +G+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 203 NYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRY 261
+ H ++ I+HRDL P N+L ++ G LK+ DFGL++ +++S ++ + Y
Sbjct: 122 AFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV----TLWY 174
Query: 262 MAPEVYR-RESYGKSVDVFSFALIVHEMFQGGP 293
AP+V +Y S+D++S I+ EM G P
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP 207
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR--------HPN 150
I G +GEVY + T K R++ + L L +++ P
Sbjct: 197 IGRGGFGEVYGCRKADT---GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 151 IVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRP 210
IV ++L F+ + + G LH L + G YA +I G+ ++H+
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR-- 311
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR- 269
+++RDL P+N+L DE GH++++D GL+ +K ++ G++ YMAPEV ++
Sbjct: 312 -FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPEVLQKG 365
Query: 270 ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS-------SLYPE 322
+Y S D FS ++ ++ +G R Q + +E R L+ S PE
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFR-----QHKTKDKHEIDRMTLTMAVELPDSFSPE 420
Query: 323 PIKALLRECWHKNPDRR 339
+++LL ++ +RR
Sbjct: 421 -LRSLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR--------HPN 150
I G +GEVY + T K R++ + L L +++ P
Sbjct: 197 IGRGGFGEVYGCRKADT---GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 151 IVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRP 210
IV ++L F+ + + G LH L + G YA +I G+ ++H+
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR-- 311
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR- 269
+++RDL P+N+L DE GH++++D GL+ +K ++ G++ YMAPEV ++
Sbjct: 312 -FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPEVLQKG 365
Query: 270 ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS-------SLYPE 322
+Y S D FS ++ ++ +G R Q + +E R L+ S PE
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFR-----QHKTKDKHEIDRMTLTMAVELPDSFSPE 420
Query: 323 PIKALLRECWHKNPDRR 339
+++LL ++ +RR
Sbjct: 421 -LRSLLEGLLQRDVNRR 436
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 146
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 207 KSIDIWSVGCILAEMLSNRP 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 151
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 211
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 212 KSIDIWSVGCILAEMLSNRP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 152
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 212
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 213 KSIDIWSVGCILAEMLSNRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 143
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 203
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 204 KSIDIWSVGCILAEMLSNRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 211 KSIDIWSVGCILAEMLSNRP 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 144
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 205 KSIDIWSVGCILAEMLSNRP 224
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 144
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 205 KSIDIWSVGCILAEMLSNRP 224
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 137 MKELGLWQKLRHPNIVQFLGVLK----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
++E+ + + RH NI+ +++ + +++ + L L+ +LK + L
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHIC 131
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM 252
+ I RG+ Y+H ++HRDL PSN+L + LK+ DFGL+++A ++ +
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 253 TGGTGSYRYMAPEVY-RRESYGKSVDVFSFALIVHEMFQGGP 293
T + Y APE+ + Y KS+D++S I+ EM P
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIH---SADII 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ DF L++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFYLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 14/239 (5%)
Query: 114 GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRN 173
G E AAK I + S R +E + + L+HPNIV+ + + + +
Sbjct: 29 GQEYAAKIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 174 GSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGH 230
G L + + + A I +N+ H + I+HRDL P N+L + +
Sbjct: 88 GELFEDIVAREYYSEADASHCIQQILESVNHCH---LNGIVHRDLKPENLLLASKSKGAA 144
Query: 231 LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQ 290
+K+ DFGL+ Q + G G Y++PEV R++ YGK VD+++ +I++ +
Sbjct: 145 VKLADFGLAIEVQGDQQAWFGFAGTPG---YLSPEVLRKDPYGKPVDMWACGVILYILLV 201
Query: 291 GGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
G P Q AY+ P ++ PE K L+ + NP +R T E +
Sbjct: 202 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA-KDLINKMLTINPAKRITASEAL 259
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +GEV + R G A K + + + E + +K+ +V +
Sbjct: 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTA--VAYALDIARGMNYLHHHRPHAIIHRD 217
+ L + + G L + G+ P A V YA +I G+ LH R I++RD
Sbjct: 255 TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRD 311
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L P N+L D+ GH++++D GL+ E + + G G+ YMAPEV + E Y S D
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQT----IKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 278 VFSFALIVHEMFQG 291
++ +++EM G
Sbjct: 368 WWALGCLLYEMIAG 381
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264.
pdb|4GPM|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264
Length = 169
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
DS+G L + + G + V + KG + N D D RT LH A+ G E+V LL+ KG
Sbjct: 67 DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 126
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGG 98
ADVN+ D GRTPL AR G+ + K+LE +GG
Sbjct: 127 ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 6 SEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGA 65
SE RL+ + G++ V +E G + N +D D RT LH A+ G E+V LL+ KGA
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGA 61
Query: 66 DVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
DVN+ D GRTPL A GH + K+L +G
Sbjct: 62 DVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 93
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
DS+G L + + G + V + KG + N D D RT LH A+ G E+V LL+ KG
Sbjct: 34 DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 93
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
ADVN+ D GRTPL A GH + K+L +G
Sbjct: 94 ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 126
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 211 KSIDIWSVGCILAEMLSNRP 230
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ D GL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDRGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR--------HPN 150
I G +GEVY + T K R++ + L L +++ P
Sbjct: 197 IGRGGFGEVYGCRKADT---GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 151 IVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRP 210
IV ++L F+ + + G LH L + G YA +I G+ ++H+
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR-- 311
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR- 269
+++RDL P+N+L DE GH++++D GL+ +K ++ G++ YMAPEV ++
Sbjct: 312 -FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPEVLQKG 365
Query: 270 ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS-------SLYPE 322
+Y S D FS ++ ++ +G R Q + +E R L+ S PE
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFR-----QHKTKDKHEIDRMTLTMAVELPDSFSPE 420
Query: 323 PIKALLRECWHKNPDRR 339
+++LL ++ +RR
Sbjct: 421 -LRSLLEGLLQRDVNRR 436
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR--------HPN 150
I G +GEVY + T K R++ + L L +++ P
Sbjct: 196 IGRGGFGEVYGCRKADT---GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 252
Query: 151 IVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRP 210
IV ++L F+ + + G LH L + G YA +I G+ ++H+
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR-- 310
Query: 211 HAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR- 269
+++RDL P+N+L DE GH++++D GL+ +K ++ G++ YMAPEV ++
Sbjct: 311 -FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPEVLQKG 364
Query: 270 ESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALS-------SLYPE 322
+Y S D FS ++ ++ +G R Q + +E R L+ S PE
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFR-----QHKTKDKHEIDRMTLTMAVELPDSFSPE 419
Query: 323 PIKALLRECWHKNPDRR 339
+++LL ++ +RR
Sbjct: 420 -LRSLLEGLLQRDVNRR 435
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 211 KSIDIWSVGCILAEMLSNRP 230
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 146
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 207 KSIDIWSVGCILAEMLSNRP 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V G +A K + S + ++ +EL L + ++H N++ L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFT 91
Query: 160 HSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ L ++L +L L++I+K + KL I RG+ Y+H II
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD---II 147
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYG 273
HRDL PSN+ +E LK+ D GL++ + +MTG + Y APE+ Y
Sbjct: 148 HRDLKPSNLAVNEDCELKILDGGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 274 KSVDVFSFALIVHEMFQG 291
++VD++S I+ E+ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +GEV + R G A K + + + E + +K+ +V +
Sbjct: 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTA--VAYALDIARGMNYLHHHRPHAIIHRD 217
+ L + + G L + G+ P A V YA +I G+ LH R I++RD
Sbjct: 255 TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRD 311
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
L P N+L D+ GH++++D GL+ E + + G G+ YMAPEV + E Y S D
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQT----IKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 278 VFSFALIVHEMFQG 291
++ +++EM G
Sbjct: 368 WWALGCLLYEMIAG 381
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +G VYL + + + +A K + S V + +E+ + L HPNI++
Sbjct: 34 GKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFY 93
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
R+ + EY G L+ L+K D ++A + Y H + +IHRD+
Sbjct: 94 DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK---VIHRDIK 150
Query: 220 PSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVF 279
P N+L G LK+ DFG S A S + G+ Y+ PE+ + + VD++
Sbjct: 151 PENLLLGLKGELKIADFGWSVHAP-----SLRRKTMCGTLDYLPPEMIEGRMHNEKVDLW 205
Query: 280 SFALIVHEMFQGGP 293
++ +E+ G P
Sbjct: 206 CIGVLCYELLVGNP 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + RH NI+ ++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 148
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 209 KSIDIWSVGCILAEMLSNRP 228
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 14/239 (5%)
Query: 114 GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRN 173
G E AAK I + S R +E + + L+HPNIV+ + + + +
Sbjct: 29 GQEYAAKIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 174 GSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGH 230
G L + + + A I +N+ H + I+HRDL P N+L + +
Sbjct: 88 GELFEDIVAREYYSEADASHCIQQILESVNHCHLN---GIVHRDLKPENLLLASKSKGAA 144
Query: 231 LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQ 290
+K+ DFGL+ Q + G G Y++PEV R++ YGK VD+++ +I++ +
Sbjct: 145 VKLADFGLAIEVQGDQQAWFGFAGTPG---YLSPEVLRKDPYGKPVDMWACGVILYILLV 201
Query: 291 GGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
G P Q AY+ P ++ PE K L+ + NP +R T E +
Sbjct: 202 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA-KDLINKMLTINPAKRITASEAL 259
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 24/267 (8%)
Query: 93 LEDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRH-P 149
LE+ G + G G+V+ +++R G IA K +R S N + +L + K P
Sbjct: 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS--GNKEENKRILMDLDVVLKSHDCP 84
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIA--RGMNYLHH 207
IVQ G + + E + G+ + LKK+ + P + + +A + + YL
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 208 HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
H +IHRD+ PSN+L DE G +K+ DFG+S + D + + G + YMAPE
Sbjct: 143 K--HGVIHRDVKPSNILLDERGQIKLCDFGIS--GRLVDDKAKDRSAGCAA--YMAPERI 196
Query: 268 -----RRESYGKSVDVFSFALIVHEMFQGG-PSNRADTAVQVADRRAYEDSRPALSSL-- 319
+ Y DV+S + + E+ G P T +V + E+ P L
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP-PLLPGHMG 255
Query: 320 YPEPIKALLRECWHKNPDRRPTFEEII 346
+ ++ +++C K+ +RP + +++
Sbjct: 256 FSGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + RH NI+ ++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 148
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ +T + Y APE+ + Y
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 209 KSIDIWSVGCILAEMLSNRP 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 137 MKELGLWQKLRHPNIVQFLGVLK----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
++E+ + + RH NI+ +++ + +++ + L L+ +LK + L
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHIC 127
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKM 252
+ I RG+ Y+H ++HRDL PSN+L + LK+ DFGL+++A ++ +
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFL 184
Query: 253 TGGTGSYRYMAPEVY-RRESYGKSVDVFSFALIVHEMFQGGP 293
T + Y APE+ + Y KS+D++S I+ EM P
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
R E+ + + +H N+V+ + L + E+L G+L DI+ +++
Sbjct: 61 RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIA 119
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYK 251
A L + + ++ LH +IHRD+ ++L G +K++DFG +++++E +
Sbjct: 120 AVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----R 172
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
G+ +MAPE+ R YG VD++S ++V EM G P + ++ A + ++
Sbjct: 173 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDN 231
Query: 312 SRPALSSLY--PEPIKALLRECWHKNPDRRPTFEEII 346
P L +L+ +K L ++P +R T E++
Sbjct: 232 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 268
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
R E+ + + +H N+V+ + L + E+L G+L DI+ +++
Sbjct: 72 RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIA 130
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYK 251
A L + + ++ LH +IHRD+ ++L G +K++DFG +++++E +
Sbjct: 131 AVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----R 183
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
G+ +MAPE+ R YG VD++S ++V EM G P + ++ A + ++
Sbjct: 184 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDN 242
Query: 312 SRPALSSLY--PEPIKALLRECWHKNPDRRPTFEEII 346
P L +L+ +K L ++P +R T E++
Sbjct: 243 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 279
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
R E+ + + +H N+V+ + L + E+L G+L DI+ +++
Sbjct: 65 RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIA 123
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYK 251
A L + + ++ LH +IHRD+ ++L G +K++DFG +++++E +
Sbjct: 124 AVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----R 176
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
G+ +MAPE+ R YG VD++S ++V EM G P + ++ A + ++
Sbjct: 177 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDN 235
Query: 312 SRPALSSLY--PEPIKALLRECWHKNPDRRPTFEEII 346
P L +L+ +K L ++P +R T E++
Sbjct: 236 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 272
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 134 NSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHD------ILKKKGKLD 187
+ F EL + +++ + G++ + + + + EY+ N S+ +L K
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 188 PPTAVAYAL--DIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEK 245
P V + + +Y+H+ + I HRD+ PSN+L D+ G +K++DFG S+ +K
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 246 DSYSYKMTGGTGSYRYMAPEVYRRES--YGKSVDVFSFALIVHEMF 289
K+ G G+Y +M PE + ES G VD++S + ++ MF
Sbjct: 206 -----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQ----FLGV 157
G +G V L K + T ++ + +PR RN ++ + L HPNIVQ F +
Sbjct: 34 GTFGTVQLGKEKSTGMSVAI--KKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91
Query: 158 LKHSERLIFLT---EYLRNGSLHDILKK--KGKLDPPTAV--AYALDIARGMNYLHHHRP 210
+ R I+L EY+ + +LH + + ++ PP + + + R + LH
Sbjct: 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV 150
Query: 211 HAIIHRDLTPSNVLQDEA-GHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPE-VYR 268
+ + HRD+ P NVL +EA G LK+ DFG +K K S S S Y APE ++
Sbjct: 151 N-VCHRDIKPHNVLVNEADGTLKLCDFGSAK----KLSPSEPNVAYICSRYYRAPELIFG 205
Query: 269 RESYGKSVDVFSFALIVHEMFQGGPSNRADTA 300
+ Y +VD++S I EM G P R D +
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
+HPNI+ V + + +TE ++ G L D + ++ A A I + + YLH
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 207 HHRPHAIIHRDLTPSNVLQ-DEAGH---LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYM 262
++HRDL PSN+L DE+G+ +++ DFG +K + ++ + + ++
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL---LMTPCYTANFV 187
Query: 263 APEVYRRESYGKSVDVFSFALIVHEMFQG------GPSNRADTAVQVADRRAYEDSRPAL 316
APEV R+ Y + D++S ++++ M G GP DT ++ R + +L
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD---DTPEEILARIG--SGKFSL 242
Query: 317 SSLYPEPI----KALLRECWHKNPDRRPT 341
S Y + K L+ + H +P +R T
Sbjct: 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLT 271
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
R E+ + + +H N+V+ + L + E+L G+L DI+ +++
Sbjct: 70 RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIA 128
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYK 251
A L + + ++ LH +IHRD+ ++L G +K++DFG +++++E +
Sbjct: 129 AVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----R 181
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
G+ +MAPE+ R YG VD++S ++V EM G P + ++ A + ++
Sbjct: 182 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDN 240
Query: 312 SRPALSSLY--PEPIKALLRECWHKNPDRRPTFEEII 346
P L +L+ +K L ++P +R T E++
Sbjct: 241 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 277
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GA+G V+ V R G AAK + + S+ + + KE+ LRHP +V +
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 160 HSERLIFLTEYLRNGSLHD-ILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
++ + E++ G L + + + K+ AV Y + +G+ ++H + +H DL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDL 281
Query: 219 TPSNVL--QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N++ + LK+ DFGL+ K S K+T TG+ + APEV + G
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAHLDPKQ--SVKVT--TGTAEFAAPEVAEGKPVGYYT 337
Query: 277 DVFSFALIVHEMFQG 291
D++S ++ + + G
Sbjct: 338 DMWSVGVLSYILLSG 352
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 150
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ + + Y APE+ + Y
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 211 KSIDIWSVGCILAEMLSNRP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I GAYG V ++ + S + ++E+ + + RH NI+ ++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 159 K----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAII 214
+ + +++ + L L+ +LK + L + I RG+ Y+H ++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSAN---VL 151
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY-RRESYG 273
HRDL PSN+L + LK+ DFGL+++A ++ + + Y APE+ + Y
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 274 KSVDVFSFALIVHEMFQGGP 293
KS+D++S I+ EM P
Sbjct: 212 KSIDIWSVGCILAEMLSNRP 231
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
R E+ + + +H N+V+ + L + E+L G+L DI+ +++
Sbjct: 115 RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIA 173
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYK 251
A L + + ++ LH +IHRD+ ++L G +K++DFG +++++E +
Sbjct: 174 AVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----R 226
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
G+ +MAPE+ R YG VD++S ++V EM G P + ++ A + ++
Sbjct: 227 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDN 285
Query: 312 SRPALSSLY--PEPIKALLRECWHKNPDRRPTFEEII 346
P L +L+ +K L ++P +R T E++
Sbjct: 286 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 322
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GA+G V+ V R G AAK + + S+ + + KE+ LRHP +V +
Sbjct: 62 GAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 160 HSERLIFLTEYLRNGSLHD-ILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
++ + E++ G L + + + K+ AV Y + +G+ ++H + +H DL
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDL 175
Query: 219 TPSNVL--QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N++ + LK+ DFGL+ K S K+T TG+ + APEV + G
Sbjct: 176 KPENIMFTTKRSNELKLIDFGLTAHLDPKQ--SVKVT--TGTAEFAAPEVAEGKPVGYYT 231
Query: 277 DVFSFALIVHEMFQG 291
D++S ++ + + G
Sbjct: 232 DMWSVGVLSYILLSG 246
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 33/270 (12%)
Query: 102 GAYGEVY--LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V+ + + G +A K I + ++ + +F + + L + H NIV L VL+
Sbjct: 20 GAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLR 79
Query: 160 -HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
++R ++L LH +++ L+P + + + YLH ++HRD+
Sbjct: 80 ADNDRDVYLVFDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDM 135
Query: 219 TPSNVLQDEAGHLKVTDFGLSK---------------IAQEKDSYSYK---MTGGTGSYR 260
PSN+L + H+KV DFGLS+ I + +++ +T +
Sbjct: 136 KPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW 195
Query: 261 YMAPEVYRRES-YGKSVDVFSFALIVHEMFQGGP-------SNRADTAVQVADRRAYEDS 312
Y APE+ + Y K +D++S I+ E+ G P N+ + + V D + ED
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDV 255
Query: 313 RPALSSLYPEPIKALLRECWHKNPDRRPTF 342
S I++L + + ++R F
Sbjct: 256 ESIQSPFAKTMIESLKEKVEIRQSNKRDIF 285
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + + + + Y + + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLSQVIQMELDHERMSYLLYQMLV--GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S +I+ EM +G
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
Query: 292 G 292
G
Sbjct: 222 G 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEY 170
K G E AAK I + S R +E + +KL+HPNIV+ ++ + +
Sbjct: 27 KTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 85
Query: 171 LRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDE 227
+ G L + + + A I + Y H + I+HR+L P N+L + +
Sbjct: 86 VTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAK 142
Query: 228 AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHE 287
+K+ DFGL+ + +++ G G+ Y++PEV +++ Y K VD+++ +I++
Sbjct: 143 GAAVKLADFGLAIEVNDSEAWH----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 198
Query: 288 MFQGGP------SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPT 341
+ G P +R ++ AY+ P ++ PE K+L+ NP +R T
Sbjct: 199 LLVGYPPFWDEDQHRLYAQIKAG---AYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRIT 254
Query: 342 FEEII 346
++ +
Sbjct: 255 ADQAL 259
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 132 VRNSFMKELGLWQKLR-HPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPT 190
+R + +KE+ + +K+ HPNI+Q + + + + ++ G L D L +K L
Sbjct: 53 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 112
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSY 250
+ + LH I+HRDL P N+L D+ ++K+TDFG S Q
Sbjct: 113 TRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKL 167
Query: 251 KMTGGTGSYRYMAPEVYR------RESYGKSVDVFSFALIVHEMFQGGPS---NRADTAV 301
+ GT S Y+APE+ YGK VD++S +I++ + G P + +
Sbjct: 168 REVCGTPS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 225
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
++ Y+ P Y + +K L+ P +R T EE +
Sbjct: 226 RMIMSGNYQFGSPEWDD-YSDTVKDLVSRFLVVQPQKRYTAEEAL 269
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + + + + Y + + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLSQVIQMELDHERMSYLLYQMLV--GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S +I+ EM +G
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
Query: 292 G 292
G
Sbjct: 222 G 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEY 170
K G E AAK I + S R +E + +KL+HPNIV+ ++ + +
Sbjct: 28 KTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 86
Query: 171 LRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDE 227
+ G L + + + A I + Y H + I+HR+L P N+L + +
Sbjct: 87 VTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAK 143
Query: 228 AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHE 287
+K+ DFGL+ + +++ G G+ Y++PEV +++ Y K VD+++ +I++
Sbjct: 144 GAAVKLADFGLAIEVNDSEAWH----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 199
Query: 288 MFQGGP------SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPT 341
+ G P +R ++ AY+ P ++ PE K+L+ NP +R T
Sbjct: 200 LLVGYPPFWDEDQHRLYAQIKAG---AYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRIT 255
Query: 342 FEEII 346
++ +
Sbjct: 256 ADQAL 260
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEY 170
K G E AAK I + S R +E + +KL+HPNIV+ ++ + +
Sbjct: 28 KTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 86
Query: 171 LRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDE 227
+ G L + + + A I + Y H + I+HR+L P N+L + +
Sbjct: 87 VTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAK 143
Query: 228 AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHE 287
+K+ DFGL+ + +++ G G+ Y++PEV +++ Y K VD+++ +I++
Sbjct: 144 GAAVKLADFGLAIEVNDSEAWH----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 199
Query: 288 MFQGGP------SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPT 341
+ G P +R ++ AY+ P ++ PE K+L+ NP +R T
Sbjct: 200 LLVGYPPFWDEDQHRLYAQIKAG---AYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRIT 255
Query: 342 FEEII 346
++ +
Sbjct: 256 ADQAL 260
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 132 VRNSFMKELGLWQKLR-HPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPT 190
+R + +KE+ + +K+ HPNI+Q + + + + ++ G L D L +K L
Sbjct: 66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSY 250
+ + LH I+HRDL P N+L D+ ++K+TDFG S +
Sbjct: 126 TRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---- 178
Query: 251 KMTGGTGSYRYMAPEVY------RRESYGKSVDVFSFALIVHEMFQGGPS---NRADTAV 301
K+ G+ Y+APE+ YGK VD++S +I++ + G P + +
Sbjct: 179 KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
++ Y+ P Y + +K L+ P +R T EE +
Sbjct: 239 RMIMSGNYQFGSPEWDD-YSDTVKDLVSRFLVVQPQKRYTAEEAL 282
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 132 VRNSFMKELGLWQKLR-HPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPT 190
+R + +KE+ + +K+ HPNI+Q + + + + ++ G L D L +K L
Sbjct: 66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSY 250
+ + LH I+HRDL P N+L D+ ++K+TDFG S Q
Sbjct: 126 TRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKL 180
Query: 251 KMTGGTGSYRYMAPEVYR------RESYGKSVDVFSFALIVHEMFQGGPS---NRADTAV 301
+ GT S Y+APE+ YGK VD++S +I++ + G P + +
Sbjct: 181 REVCGTPS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 302 QVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
++ Y+ P Y + +K L+ P +R T EE +
Sbjct: 239 RMIMSGNYQFGSPEWDD-YSDTVKDLVSRFLVVQPQKRYTAEEAL 282
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 133 RNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV 192
R E+ + + +H N+V+ + L + E+L G+L DI+ +++
Sbjct: 192 RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIA 250
Query: 193 AYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSYK 251
A L + + ++ LH +IHRD+ ++L G +K++DFG +++++E +
Sbjct: 251 AVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----R 303
Query: 252 MTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYED 311
G+ +MAPE+ R YG VD++S ++V EM G P + ++ A + ++
Sbjct: 304 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDN 362
Query: 312 SRPALSSLY--PEPIKALLRECWHKNPDRRPTFEEII 346
P L +L+ +K L ++P +R T E++
Sbjct: 363 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 399
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 34/272 (12%)
Query: 114 GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRN 173
G E AAK I + S R +E + + L+HPNIV+ + + + +
Sbjct: 47 GQEYAAKIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 105
Query: 174 GSL-HDILKKK--GKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDE 227
G L DI+ ++ + D + L+ LH H+ ++HRDL P N+L + +
Sbjct: 106 GELFEDIVAREYYSEADASHCIQQILEAV-----LHCHQ-MGVVHRDLKPENLLLASKLK 159
Query: 228 AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHE 287
+K+ DFGL A E + G G+ Y++PEV R++ YGK VD+++ +I++
Sbjct: 160 GAAVKLADFGL---AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 288 MFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEE 344
+ G P Q AY+ P ++ PE K L+ + NP +R T
Sbjct: 217 LLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA-KDLINKMLTINPSKRIT--- 272
Query: 345 IIFRLEAIQESF--QKKTVPSC------CDCM 368
EA++ + + TV SC DC+
Sbjct: 273 ---AAEALKHPWISHRSTVASCMHRQETVDCL 301
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + + + + Y + + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLSQVIQMELDHERMSYLLYQMLV--GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM +G
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 292 G 292
G
Sbjct: 222 G 222
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 30/259 (11%)
Query: 116 EIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV-LKHSERLI----FLTEY 170
++A KT++ +S + F+ E + HPN+++ LGV ++ S + I + +
Sbjct: 64 KVAVKTMKLDNSSQREIEE-FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF 122
Query: 171 LRNGSLHD-ILKKKGKLDPP-----TAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL 224
++ G LH +L + + P T + + +DIA GM YL + +HRDL N +
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCM 179
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALI 284
+ + V DFGLSK D Y +++A E Y DV++F +
Sbjct: 180 LRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVT 238
Query: 285 VHEMFQGGPSNRADTAVQVADRRAY-------EDSRPALSSLYPEPIKALLRECWHKNPD 337
+ E+ G + VQ + Y + L LY ++ CW +P
Sbjct: 239 MWEIATRGMTPYP--GVQNHEMYDYLLHGHRLKQPEDCLDELY-----EIMYSCWRTDPL 291
Query: 338 RRPTFEEIIFRLEAIQESF 356
RPTF + +LE + ES
Sbjct: 292 DRPTFSVLRLQLEKLLESL 310
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 126/299 (42%), Gaps = 70/299 (23%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK--LRHPNIVQFLG 156
I G YG VY +A K S A+ R +F+ E +++ + H NI +F+
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVF--SFAN----RQNFINEKNIYRVPLMEHDNIARFI- 73
Query: 157 VLKHSERL--------IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH-- 206
ER+ + + EY NGSL L D ++ A + RG+ YLH
Sbjct: 74 --VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-DWVSSCRLAHSVTRGLAYLHTE 130
Query: 207 -----HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLS------KIAQ--EKDSYSYKMT 253
H++P AI HRDL NVL G ++DFGLS ++ + E+D+ +
Sbjct: 131 LPRGDHYKP-AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA---I 186
Query: 254 GGTGSYRYMAPEVYR-------RESYGKSVDVFSFALIVHEMF---------QGGPSNRA 297
G+ RYMAPEV ES K VD+++ LI E+F + P +
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246
Query: 298 DTAVQVADRRAYED---------SRPAL------SSLYPEPIKALLRECWHKNPDRRPT 341
+V + +ED RP +SL +K + +CW ++ + R T
Sbjct: 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLT 305
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 20/242 (8%)
Query: 114 GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRN 173
G E AAK I + S R +E + + L+H NIV+ + + + +
Sbjct: 29 GHEYAAKIINTKKLS-ARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 174 GSL-HDILKKK--GKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDE 227
G L DI+ ++ + D + L+ LH H+ ++HRDL P N+L + +
Sbjct: 88 GELFEDIVAREYYSEADASHCIQQILEAV-----LHCHQ-MGVVHRDLKPENLLLASKCK 141
Query: 228 AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHE 287
+K+ DFGL+ Q + G G Y++PEV R+E+YGK VD+++ +I++
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFAGTPG---YLSPEVLRKEAYGKPVDIWACGVILYI 198
Query: 288 MFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEE 344
+ G P Q AY+ P ++ PE K L+ + NP +R T E
Sbjct: 199 LLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA-KNLINQMLTINPAKRITAHE 257
Query: 345 II 346
+
Sbjct: 258 AL 259
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 111 KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEY 170
K G E AAK I + S R +E + +KL+HPNIV+ ++ + +
Sbjct: 51 KTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109
Query: 171 LRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDE 227
+ G L + + + A I + Y H + I+HR+L P N+L + +
Sbjct: 110 VTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAK 166
Query: 228 AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHE 287
+K+ DFGL+ + +++ G G+ Y++PEV +++ Y K VD+++ +I++
Sbjct: 167 GAAVKLADFGLAIEVNDSEAWH----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 222
Query: 288 MFQGGP------SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPT 341
+ G P +R ++ AY+ P ++ PE K+L+ NP +R T
Sbjct: 223 LLVGYPPFWDEDQHRLYAQIKAG---AYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRIT 278
Query: 342 FEEII 346
++ +
Sbjct: 279 ADQAL 283
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +GEV+ + + T A K + + M E + K+ IV +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 160 HSERLIFLTEYLRNGSL----HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
L + + G + +++ + P A+ Y I G+ +LH II+
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIY 312
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL P NVL D+ G+++++D GL A E + K G G+ +MAPE+ E Y S
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 276 VDVFSFALIVHEM 288
VD F+ + ++EM
Sbjct: 370 VDYFALGVTLYEM 382
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 15/187 (8%)
Query: 114 GTEIAAKTIR-SSIASNPRVRNSFMK-ELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYL 171
G + A K + + S+P + +K E + L+HP+IV+ L L + E++
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 172 RNGSL-HDILKKKGK---LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL--- 224
L +I+K+ A Y I + Y H + IIHRD+ P NVL
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLAS 165
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALI 284
++ + +K+ DFG +A + G G+ +MAPEV +RE YGK VDV+ +I
Sbjct: 166 KENSAPVKLGDFG---VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 285 VHEMFQG 291
+ + G
Sbjct: 223 LFILLSG 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 92 ILEDRGGIDPGAYGEV-YLVKWR-GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
+ D + GAYG V V R G ++A K + S + ++ +EL L + +RH
Sbjct: 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMRHE 84
Query: 150 NIVQFLGVLKHSERLIFLTEYLR----NGSLHDILKKKGKLDPPTAVAYALDIARGMNYL 205
N++ L V E L T++ G+ L K KL + +G+ Y+
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 144
Query: 206 HHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPE 265
H IIHRDL P N+ +E LK+ DFGL A++ DS +M G + Y APE
Sbjct: 145 H---AAGIIHRDLKPGNLAVNEDCELKILDFGL---ARQADS---EMXGXVVTRWYRAPE 195
Query: 266 VYRR-ESYGKSVDVFSFALIVHEMFQG 291
V Y ++VD++S I+ EM G
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 123/300 (41%), Gaps = 64/300 (21%)
Query: 96 RGGIDPGAYGEVYLV------KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHP 149
+G I G+YG V + R +I K I NP+ E+ L +KL HP
Sbjct: 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQI--NPKDVERIKTEVRLMKKLHHP 88
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNGSLHDILKK--------------KGKLDP-PTAVAY 194
NI + V + + + + E G L D L K ++ P P
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 195 ALD-------------------------IARGMNYLHHHRPHAIIHRDLTPSNVL--QDE 227
A++ I ++YLH+ I HRD+ P N L ++
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNK 205
Query: 228 AGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYR--RESYGKSVDVFSFALI 284
+ +K+ DFGLSK + + Y MT G+ ++APEV ESYG D +S ++
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 285 VHEMFQGGPS----NRADTAVQVADRR-AYEDSRPALSSLYPEPIKALLRECWHKNPDRR 339
+H + G N ADT QV +++ +E+ P + L P + LL ++N D R
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLNKKLCFEN--PNYNVLSPLA-RDLLSNLLNRNVDER 322
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +GEV+ + + T A K + + M E + K+ IV +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 160 HSERLIFLTEYLRNGSL----HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
L + + G + +++ + P A+ Y I G+ +LH II+
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIY 312
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL P NVL D+ G+++++D GL A E + K G G+ +MAPE+ E Y S
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 276 VDVFSFALIVHEM 288
VD F+ + ++EM
Sbjct: 370 VDYFALGVTLYEM 382
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +GEV+ + + T A K + + M E + K+ IV +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 160 HSERLIFLTEYLRNGSL----HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
L + + G + +++ + P A+ Y I G+ +LH II+
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIY 312
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL P NVL D+ G+++++D GL A E + K G G+ +MAPE+ E Y S
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 276 VDVFSFALIVHEM 288
VD F+ + ++EM
Sbjct: 370 VDYFALGVTLYEM 382
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G +GEV+ + + T A K + + M E + K+ IV +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 160 HSERLIFLTEYLRNGSL----HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
L + + G + +++ + P A+ Y I G+ +LH II+
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIY 312
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
RDL P NVL D+ G+++++D GL A E + K G G+ +MAPE+ E Y S
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 276 VDVFSFALIVHEM 288
VD F+ + ++EM
Sbjct: 370 VDYFALGVTLYEM 382
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 122/278 (43%), Gaps = 41/278 (14%)
Query: 93 LEDRGGIDPGAYGEV--YLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRH-P 149
L+D G I GAYG V + K G +A K IRS++ + + + + +L + + P
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSSDCP 81
Query: 150 NIVQFLGVLKHSERLIFLTEYLRNG----------SLHDILKKK--GKLDPPTAVAYALD 197
IVQF G L E + L D++ ++ GK+ L
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKI--------TLA 133
Query: 198 IARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTG 257
+ +N+L + IIHRD+ PSN+L D +G++K+ DFG+S Q DS + T G
Sbjct: 134 TVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSIA--KTRDAG 187
Query: 258 SYRYMAPE----VYRRESYGKSVDVFSFALIVHEMFQG-----GPSNRADTAVQVADRRA 308
YMAPE R+ Y DV+S + ++E+ G ++ D QV
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDP 247
Query: 309 YEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
+ S P I + C K+ +RP ++E++
Sbjct: 248 PQLSNSEEREFSPSFIN-FVNLCLTKDESKRPKYKELL 284
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM +G
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 292 G 292
G
Sbjct: 222 G 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV+ + K G + A K +R + +EL L P IV G ++
Sbjct: 104 GSFGEVHRMEDKQTGFQCAVKKVRLEVFR--------AEELMACAGLTSPRIVPLYGAVR 155
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E L GSL ++K++G L A+ Y G+ YLH R I+H D+
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDVK 212
Query: 220 PSNVLQDEAG-HLKVTDFGLSKIAQEKDSYSYKMTGG--TGSYRYMAPEVYRRESYGKSV 276
NVL G H + DFG + Q +TG G+ +MAPEV S V
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKV 272
Query: 277 DVFSFALIVHEMFQG 291
DV+S ++ M G
Sbjct: 273 DVWSSCCMMLHMLNG 287
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM +G
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 292 G 292
G
Sbjct: 222 G 222
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV---- 157
G +G V+ K + + R + + R M+E+ KL HP IV++
Sbjct: 16 GGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEK 75
Query: 158 -----LKHSERLIFL---TEYLRNGSLHDILKKKGKLDP---PTAVAYALDIARGMNYLH 206
L+ S ++L + R +L D + + ++ + L IA + +LH
Sbjct: 76 NTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH 135
Query: 207 HHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGL-SKIAQEKDSYSY--------KMTGGTG 257
++HRDL PSN+ +KV DFGL + + Q+++ + + TG G
Sbjct: 136 SK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVG 192
Query: 258 SYRYMAPEVYRRESYGKSVDVFSFALIVHEMF 289
+ YM+PE SY VD+FS LI+ E+
Sbjct: 193 TKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM +G
Sbjct: 166 KILDFGLARTA----GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 292 G 292
G
Sbjct: 222 G 222
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Query: 102 GAYGEVYLVKWRGT--EIAAKTIRS-SIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
G +G+V+ + T ++AAK I++ + V+N E+ + +L H N++Q
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN----EISVMNQLDHANLIQLYDAF 155
Query: 159 KHSERLIFLTEYLRNGSLHD-ILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ ++ + EY+ G L D I+ + L + + I G+ ++H I+H D
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLD 212
Query: 218 LTPSNVL--QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS 275
L P N+L +A +K+ DFGL++ + ++ K+ G+ ++APEV +
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYKPRE----KLKVNFGTPEFLAPEVVNYDFVSFP 268
Query: 276 VDVFSFALIVHEMFQG 291
D++S +I + + G
Sbjct: 269 TDMWSVGVIAYMLLSG 284
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 53 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 111
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 112 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 166
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM +G
Sbjct: 167 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
Query: 292 G 292
G
Sbjct: 223 G 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM +G
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 292 G 292
G
Sbjct: 222 G 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM +G
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 292 G 292
G
Sbjct: 222 G 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV+ + K G + A K +R + +EL L P IV G ++
Sbjct: 85 GSFGEVHRMEDKQTGFQCAVKKVRLEVFR--------AEELMACAGLTSPRIVPLYGAVR 136
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E L GSL ++K++G L A+ Y G+ YLH R I+H D+
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDVK 193
Query: 220 PSNVLQDEAG-HLKVTDFGLSKIAQEKDSYSYKMTGG--TGSYRYMAPEVYRRESYGKSV 276
NVL G H + DFG + Q +TG G+ +MAPEV S V
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKV 253
Query: 277 DVFSFALIVHEMFQG 291
DV+S ++ M G
Sbjct: 254 DVWSSCCMMLHMLNG 268
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM +G
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 292 G 292
G
Sbjct: 222 G 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 29/273 (10%)
Query: 83 SFGHVVICKILEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFM-KELG 141
+FG VV + R +D Y + K R TE TI S + + + ++ +
Sbjct: 18 AFGQVV-----KARNALDSRYYA---IKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 142 LWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL--DIA 199
W L N V+ + +K L EY NG+L+D++ + L+ + L I
Sbjct: 70 AW--LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQIL 126
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI-----------AQEKDSY 248
++Y+H IIHRDL P N+ DE+ ++K+ DFGL+K +Q
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 249 SYKMTGGTGSYRYMAPEVYRRES-YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRR 307
S +T G+ Y+A EV Y + +D++S +I EM + + R
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 308 AYEDSRPALSSLYPEPIKALLRECWHKNPDRRP 340
+ P + K ++R +P++RP
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
Query: 114 GTEIAAKTI-----RSSIASNPRVRNSFMKELGLWQKLR-HPNIVQFLGVLKHSERLIFL 167
G E A K + R S VR + +E + +++ HP+I+ + + S + +
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
+ +R G L D L +K L + + +++LH + I+HRDL P N+L D+
Sbjct: 179 FDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDD 235
Query: 228 AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR------RESYGKSVDVFSF 281
++++DFG S + + K+ G+ Y+APE+ + YGK VD+++
Sbjct: 236 NMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291
Query: 282 ALIVHEMFQGGP 293
+I+ + G P
Sbjct: 292 GVILFTLLAGSP 303
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 114 GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLT 168
G +A K + + + ++ +EL L + + H NI+ L V + L ++L
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 105
Query: 169 EYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEA 228
L + +L ++ + LD + G+ +LH IIHRDL PSN++
Sbjct: 106 MELMDANLCQVIHME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSD 160
Query: 229 GHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
LK+ DFGL++ A S ++ MT + Y APEV Y ++VD++S I+ E+
Sbjct: 161 CTLKILDFGLARTA----STNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 216
Query: 289 FQGG 292
+G
Sbjct: 217 VKGS 220
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 26/261 (9%)
Query: 102 GAYGEVYLVKWRGT-EIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQFLGVL- 158
G YG+VY + T ++AA + +E+ + +K H NI + G
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 159 -----KHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYAL-DIARGMNYLHHHRPH 211
++L + E+ GS+ D++K KG +AY +I RG+++LH H+
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-- 149
Query: 212 AIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRE- 270
+IHRD+ NVL E +K+ DFG+S + D + G+ +MAPEV +
Sbjct: 150 -VIHRDIKGQNVLLTENAEVKLVDFGVS---AQLDRTVGRRNTFIGTPYWMAPEVIACDE 205
Query: 271 ----SYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPAL-SSLYPEPIK 325
+Y D++S + EM +G P D A + P L S + + +
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPP-LCDMHPMRALFLIPRNPAPRLKSKKWSKKFQ 264
Query: 326 ALLRECWHKNPDRRPTFEEII 346
+ + C KN +RP E+++
Sbjct: 265 SFIESCLVKNHSQRPATEQLM 285
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 102 GAYGEVY--LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G YGEVY + +A K IR V + ++E+ L ++L+H NI++ V+
Sbjct: 45 GTYGEVYKAIDTVTNETVAIKRIRLE-HEEEGVPGTAIREVSLLKELQHRNIIELKSVIH 103
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
H+ RL + EY N L + K + ++ + G+N+ H R +HRDL
Sbjct: 104 HNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLK 159
Query: 220 PSNVL-----QDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTGSYRYMAPEVYR-RESY 272
P N+L E LK+ DFGL++ +++++ + Y PE+ Y
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII----TLWYRPPEILLGSRHY 215
Query: 273 GKSVDVFSFALIVHEMFQGGPSNRADTAV 301
SVD++S A I EM P D+ +
Sbjct: 216 STSVDIWSIACIWAEMLMKTPLFPGDSEI 244
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 147 RHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLH 206
+HPNI+ V + + +TE + G L D + ++ A A I + + YLH
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 207 HHRPHAIIHRDLTPSNVLQ-DEAGH---LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYM 262
++HRDL PSN+L DE+G+ +++ DFG +K + ++ + + ++
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL---LXTPCYTANFV 187
Query: 263 APEVYRRESYGKSVDVFSFALIVHEMFQG 291
APEV R+ Y + D++S ++++ G
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 13/196 (6%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G Y VY K + T+ +A K IR + + ++E+ L + L+H NIV ++
Sbjct: 13 GTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH 70
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKL-DPPTAVAYALDIARGMNYLHHHRPHAIIHRDL 218
+ L + EYL + L L G + + + + RG+ Y H + ++HRDL
Sbjct: 71 TEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDL 126
Query: 219 TPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES-YGKSVD 277
P N+L +E G LK+ DFGL++ A+ + +Y T YR P++ + Y +D
Sbjct: 127 KPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYR--PPDILLGSTDYSTQID 183
Query: 278 VFSFALIVHEMFQGGP 293
++ I +EM G P
Sbjct: 184 MWGVGCIFYEMATGRP 199
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 99 IDPGAYGEV--YLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
+ GAYG V + K G ++A K + S + ++ +EL L + ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 90
Query: 157 VLKHSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPH 211
V + L +L L I+ K + + Y + +G+ Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM--LKGLKYIHSA--- 145
Query: 212 AIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-E 270
++HRDL P N+ +E LK+ DFGL++ A +MTG + Y APEV
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADA------EMTGYVVTRWYRAPEVILSWM 199
Query: 271 SYGKSVDVFSFALIVHEMFQG 291
Y ++VD++S I+ EM G
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTG 220
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 33/213 (15%)
Query: 85 GHVVICKILEDRGGIDPGAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGL 142
G+ + +++ D+ E+ VK+ RG +IAA R I
Sbjct: 30 GNFGVARLMRDKQS------NELVAVKYIERGEKIAANVKREIINH-------------- 69
Query: 143 WQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGM 202
+ LRHPNIV+F V+ L + EY G L + + G+ A + + G+
Sbjct: 70 -RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 203 NYLHHHRPHAIIHRDLTPSNVLQD--EAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYR 260
+Y H + + HRDL N L D A LK+ DFG SK + G+
Sbjct: 129 SYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPA 181
Query: 261 YMAPEVYRRESY-GKSVDVFSFALIVHEMFQGG 292
Y+APEV ++ Y GK DV+S + ++ M G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 114 GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLT 168
G +A K + + + ++ +EL L + + H NI+ L V + L ++L
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 107
Query: 169 EYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEA 228
L + +L ++ + LD + G+ +LH IIHRDL PSN++
Sbjct: 108 MELMDANLCQVIHME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSD 162
Query: 229 GHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
LK+ DFGL++ A ++ MT + Y APEV Y +VD++S I+ E+
Sbjct: 163 CTLKILDFGLARTA----CTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
Query: 289 FQG 291
+G
Sbjct: 219 VKG 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 21/257 (8%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGL-WQKLRHPNIVQFLGVL 158
GAYG V ++ G +A K IR+++ S + R + +L + + + P V F G L
Sbjct: 62 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR--LLMDLDISMRTVDCPFTVTFYGAL 119
Query: 159 KHSERLIFLTEYLRNGSLHDILKK---KGKLDPPTAVA-YALDIARGMNYLHHHRPHAII 214
E +++ L + SL K+ KG+ P + A+ I + + +LH ++I
Sbjct: 120 -FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVI 176
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRE---- 270
HRD+ PSNVL + G +K+ DFG+S + S T G YMAPE E
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLVD----SVAKTIDAGCKPYMAPERINPELNQK 232
Query: 271 SYGKSVDVFSFALIVHEM-FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLR 329
Y D++S + + E+ P + T Q + E S + +
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 292
Query: 330 ECWHKNPDRRPTFEEII 346
+C KN RPT+ E++
Sbjct: 293 QCLKKNSKERPTYPELM 309
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 54 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 112
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 113 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 167
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQG 291
K+ DFGL++ A S+ M + Y APEV Y ++VD++S I+ EM +G
Sbjct: 168 KILDFGLARTA----GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
Query: 292 G 292
G
Sbjct: 224 G 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 131 RVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPT 190
++ + +E+ + LRHPNIV+F V+ L + EY G L + + G+
Sbjct: 57 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQD--EAGHLKVTDFGLSKIAQEKDSY 248
A + + G++Y H + + HRDL N L D A LK+ DFG SK +
Sbjct: 117 ARFFFQQLISGVSYAHAMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKAS----VL 169
Query: 249 SYKMTGGTGSYRYMAPEVYRRESY-GKSVDVFSFALIVHEMFQGG 292
+ G+ Y+APEV ++ Y GK DV+S + ++ M G
Sbjct: 170 HSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 131 RVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPT 190
++ + +E+ + LRHPNIV+F V+ L + EY G L + + G+
Sbjct: 56 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 115
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQD--EAGHLKVTDFGLSKIAQEKDSY 248
A + + G++Y H + + HRDL N L D A LK+ DFG SK
Sbjct: 116 ARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVL 168
Query: 249 SYKMTGGTGSYRYMAPEVYRRESY-GKSVDVFSFALIVHEMFQGG 292
+ G+ Y+APEV ++ Y GK DV+S + ++ M G
Sbjct: 169 HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 143 WQKLRHPNIVQFLGV---LKHSER-LIFLTEYLRNGSLHDILKKKGK--LDPPTAVAYAL 196
WQ P+IV L V + H +R L+ + E + G L ++++G A
Sbjct: 76 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 135
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
DI + +LH H I HRD+ P N+L +++ LK+TDFG +K ++ +
Sbjct: 136 DIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQ 187
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVA---DRR--- 307
+ Y+APEV E Y KS D++S +I++ + G P ++T ++ RR
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 247
Query: 308 -AYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
Y P S + E K L+R +P R T + +
Sbjct: 248 GQYGFPNPEWSEV-SEDAKQLIRLLLKTDPTERLTITQFM 286
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 99 IDPGAYGEV--YLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
+ GAYG V + K G ++A K + S + ++ +EL L + ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 108
Query: 157 VLKHSERL-----IFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPH 211
V + L +L L I+ + + + Y + +G+ Y+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQM--LKGLKYIHSA--- 163
Query: 212 AIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEV-YRRE 270
++HRDL P N+ +E LK+ DFGL++ A +MTG + Y APEV
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADA------EMTGYVVTRWYRAPEVILSWM 217
Query: 271 SYGKSVDVFSFALIVHEMFQG 291
Y ++VD++S I+ EM G
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTG 238
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 143 WQKLRHPNIVQFLGV---LKHSER-LIFLTEYLRNGSLHDILKKKGK--LDPPTAVAYAL 196
WQ P+IV L V + H +R L+ + E + G L ++++G A
Sbjct: 57 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 116
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
DI + +LH H I HRD+ P N+L +++ LK+TDFG +K ++ +
Sbjct: 117 DIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQ 168
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVA---DRR--- 307
+ Y+APEV E Y KS D++S +I++ + G P ++T ++ RR
Sbjct: 169 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 228
Query: 308 -AYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
Y P S + E K L+R +P R T + +
Sbjct: 229 GQYGFPNPEWSEV-SEDAKQLIRLLLKTDPTERLTITQFM 267
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 29/261 (11%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V ++ G +A K IR+++ S + R ++ + + + P V F G L
Sbjct: 18 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM-RTVDCPFTVTFYGAL- 75
Query: 160 HSERLIFLTEYLRNGSLHDILKK---KGKLDPPTAVA-YALDIARGMNYLHHHRPHAIIH 215
E +++ L + SL K+ KG+ P + A+ I + + +LH ++IH
Sbjct: 76 FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIH 133
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLS-----KIAQEKDSYSYKMTGGTGSYRYMAPEVYRRE 270
RD+ PSNVL + G +K+ DFG+S +A++ D+ G YMAPE E
Sbjct: 134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---------GCKPYMAPERINPE 184
Query: 271 ----SYGKSVDVFSFALIVHEM-FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIK 325
Y D++S + + E+ P + T Q + E S + +
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFV 244
Query: 326 ALLRECWHKNPDRRPTFEEII 346
+C KN RPT+ E++
Sbjct: 245 DFTSQCLKKNSKERPTYPELM 265
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
Identical Consensus Repeats
Length = 126
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D G L + G V LE G + N D + RT LHLA+ G E+V LLLE G
Sbjct: 32 DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGGIDPGAY 104
ADVN+ D+ GRTPL A GH+ + K+L ++ GAY
Sbjct: 92 ADVNAKDKNGRTPLHLAARNGHLEVVKLL-----LEAGAY 126
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
LE G + N D + RT LHLA+ G E+V LLLE GADVN+ D+ GRTPL A GH+
Sbjct: 22 LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81
Query: 88 VICKILEDRG 97
+ K+L + G
Sbjct: 82 EVVKLLLEAG 91
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 40 DKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
+ RT LHLA+ G E+V LLLE GADVN+ D+ GRTPL A GH+ + K+L + G
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 58
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 131 RVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPT 190
++ + +E+ + LRHPNIV+F V+ L + EY G L + + G+
Sbjct: 57 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQD--EAGHLKVTDFGLSKI----AQE 244
A + + G++Y H + + HRDL N L D A LK+ FG SK +Q
Sbjct: 117 ARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP 173
Query: 245 KDSYSYKMTGGTGSYRYMAPEVYRRESY-GKSVDVFSFALIVHEMFQGG 292
KD+ G+ Y+APEV ++ Y GK DV+S + ++ M G
Sbjct: 174 KDT--------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 114 GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRN 173
G E AA I + S R +E + + L+HPNIV+ + + + +
Sbjct: 36 GQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94
Query: 174 GSL-HDILKKK--GKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDE 227
G L DI+ ++ + D + L+ LH H+ ++HR+L P N+L + +
Sbjct: 95 GELFEDIVAREYYSEADASHCIQQILEAV-----LHCHQ-MGVVHRNLKPENLLLASKLK 148
Query: 228 AGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHE 287
+K+ DFGL A E + G G+ Y++PEV R++ YGK VD+++ +I++
Sbjct: 149 GAAVKLADFGL---AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 205
Query: 288 MFQGGP---SNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEE 344
+ G P Q AY+ P ++ PE K L+ + NP +R
Sbjct: 206 LLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA-KDLINKMLTINPSKR----- 259
Query: 345 IIFRLEAIQESF--QKKTVPSC------CDCM 368
I EA++ + + TV SC DC+
Sbjct: 260 -ITAAEALKHPWISHRSTVASCMHRQETVDCL 290
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 102 GAYGEVY--LVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAY +V + G E A K I A + R R F + L+Q + NI++ + +
Sbjct: 24 GAYAKVQGAVSLQNGKEYAVKIIEKQ-AGHSRSR-VFREVETLYQCQGNKNILELIEFFE 81
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
R + E L+ GS+ ++K+ + A D+A +++LH I HRDL
Sbjct: 82 DDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIAHRDLK 138
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDS----YSYKMTGGTGSYRYMAPEVY----- 267
P N+L ++ +K+ DF L + +S + ++T GS YMAPEV
Sbjct: 139 PENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTD 198
Query: 268 RRESYGKSVDVFSFALIVHEMFQGGP 293
+ Y K D++S ++++ M G P
Sbjct: 199 QATFYDKRCDLWSLGVVLYIMLSGYP 224
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 45 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 104 MDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTL 158
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 159 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLXQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
pdb|1N0Q|B Chain B, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
Length = 93
Score = 66.2 bits (160), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
LE G + N D + RT LHLA+ G E+V LLLE GADVN+ D+ GRTPL A GH+
Sbjct: 22 LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81
Query: 88 VICKILEDRGGIDPGAY 104
+ K+L ++ GAY
Sbjct: 82 EVVKLL-----LEAGAY 93
Score = 58.2 bits (139), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 42 RTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHVVICKILEDRGG 98
RT LHLA+ G E+V LLLE GADVN+ D+ GRTPL A GH+ + K+L + G
Sbjct: 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 90 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 149 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 203
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 204 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 29/273 (10%)
Query: 83 SFGHVVICKILEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFM-KELG 141
+FG VV + R +D Y + K R TE TI S + + + ++ +
Sbjct: 18 AFGQVV-----KARNALDSRYYA---IKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 142 LWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL--DIA 199
W L N V+ + +K L EY N +L+D++ + L+ + L I
Sbjct: 70 AW--LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQIL 126
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI-----------AQEKDSY 248
++Y+H IIHRDL P N+ DE+ ++K+ DFGL+K +Q
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 249 SYKMTGGTGSYRYMAPEVYRRES-YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRR 307
S +T G+ Y+A EV Y + +D++S +I EM + + R
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 308 AYEDSRPALSSLYPEPIKALLRECWHKNPDRRP 340
+ P + K ++R +P++RP
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 146 LRHPNIVQFLGVLKHSER----LIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARG 201
++H NI+QF+G K L +T + GSL D LK + A +ARG
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARG 133
Query: 202 MNYLHH--------HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
+ YLH H+P AI HRD+ NVL + DFGL+ + E +
Sbjct: 134 LAYLHEDIPGLKDGHKP-AISHRDIKSKNVLLKNNLTACIADFGLA-LKFEAGKSAGDTH 191
Query: 254 GGTGSYRYMAPEV------YRRESYGKSVDVFSFALIVHEM 288
G G+ RYMAPEV ++R+++ + +D+++ L++ E+
Sbjct: 192 GQVGTRRYMAPEVLEGAINFQRDAFLR-IDMYAMGLVLWEL 231
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 46 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 105 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 159
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 160 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 45 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 104 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 158
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 159 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 46 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 105 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 159
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 160 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 166 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 53 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 112 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 166
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 167 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 51 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 109
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 110 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 164
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 165 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 217
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 53 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 112 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 166
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 167 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L ++L L
Sbjct: 90 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 149 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 203
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 204 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 131 RVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPT 190
++ + +E+ + LRHPNIV+F V+ L + EY G L + + G+
Sbjct: 57 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQD--EAGHLKVTDFGLSKIAQEKDSY 248
A + + G++Y H + + HRDL N L D A LK+ FG SK
Sbjct: 117 ARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVL 169
Query: 249 SYKMTGGTGSYRYMAPEVYRRESY-GKSVDVFSFALIVHEMFQGG 292
+ G+ Y+APEV ++ Y GK DV+S + ++ M G
Sbjct: 170 HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV+ +K + G + A K +R + ++EL L P IV G ++
Sbjct: 69 GSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVR 120
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E L GSL ++K+ G L A+ Y G+ YLH R I+H D+
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVK 177
Query: 220 PSNVLQDEAG-HLKVTDFGLSKIAQEKDSYSYKMTGG--TGSYRYMAPEVYRRESYGKSV 276
NVL G + DFG + Q +TG G+ +MAPEV + V
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 237
Query: 277 DVFSFALIVHEMFQG 291
D++S ++ M G
Sbjct: 238 DIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV+ +K + G + A K +R + ++EL L P IV G ++
Sbjct: 85 GSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVR 136
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E L GSL ++K+ G L A+ Y G+ YLH R I+H D+
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVK 193
Query: 220 PSNVLQDEAG-HLKVTDFGLSKIAQEKDSYSYKMTGG--TGSYRYMAPEVYRRESYGKSV 276
NVL G + DFG + Q +TG G+ +MAPEV + V
Sbjct: 194 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 253
Query: 277 DVFSFALIVHEMFQG 291
D++S ++ M G
Sbjct: 254 DIWSSCCMMLHMLNG 268
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV+ +K + G + A K +R + ++EL L P IV G ++
Sbjct: 83 GSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVR 134
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ E L GSL ++K+ G L A+ Y G+ YLH R I+H D+
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVK 191
Query: 220 PSNVLQDEAG-HLKVTDFGLSKIAQEKDSYSYKMTGG--TGSYRYMAPEVYRRESYGKSV 276
NVL G + DFG + Q +TG G+ +MAPEV + V
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 251
Query: 277 DVFSFALIVHEMFQG 291
D++S ++ M G
Sbjct: 252 DIWSSCCMMLHMLNG 266
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 114 GTEIAAKTIR-SSIASNPRVRNSFMK-ELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYL 171
G + A K + + S+P + +K E + L+HP+IV+ L L + E++
Sbjct: 51 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 110
Query: 172 RNGSL-HDILKKKGK---LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL--- 224
L +I+K+ A Y I + Y H + IIHRD+ P VL
Sbjct: 111 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLAS 167
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALI 284
++ + +K+ FG +A + G G+ +MAPEV +RE YGK VDV+ +I
Sbjct: 168 KENSAPVKLGGFG---VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 224
Query: 285 VHEMFQG 291
+ + G
Sbjct: 225 LFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 114 GTEIAAKTIR-SSIASNPRVRNSFMK-ELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYL 171
G + A K + + S+P + +K E + L+HP+IV+ L L + E++
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 172 RNGSL-HDILKKKGK---LDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL--- 224
L +I+K+ A Y I + Y H + IIHRD+ P VL
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLAS 165
Query: 225 QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALI 284
++ + +K+ FG +A + G G+ +MAPEV +RE YGK VDV+ +I
Sbjct: 166 KENSAPVKLGGFG---VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 285 VHEMFQG 291
+ + G
Sbjct: 223 LFILLSG 229
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 22/216 (10%)
Query: 99 IDPGAYGEVYL-VKWRGTEIAAKTIRSSIASNPRVR---NSFM-----KELGLWQKLRHP 149
I G+YG V V G +A K + ++++ V +SF+ +E+ L HP
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 150 NIVQFLGVLKHSE-----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNY 204
NI+ + H E +L +TE +R I ++ + P + I G++
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
LH ++HRDL P N+L + + + DF L++ +D+ T Y AP
Sbjct: 150 LHEA---GVVHRDLHPGNILLADNNDITICDFNLAR----EDTADANKTHYVTHRWYRAP 202
Query: 265 E-VYRRESYGKSVDVFSFALIVHEMFQGGPSNRADT 299
E V + + + K VD++S ++ EMF R T
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 132 VRNSFMKELG-LWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPT 190
+R+ +E+ L+Q H N+++ + + +R + E +R GS+ + K+ +
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE 112
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGL-SKIAQEKD 246
A D+A +++LH+ I HRDL P N+L ++ +K+ DFGL S I D
Sbjct: 113 ASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD 169
Query: 247 S---YSYKMTGGTGSYRYMAPEVYRRES-----YGKSVDVFSFALIVHEMFQGGP 293
+ ++ GS YMAPEV S Y K D++S +I++ + G P
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 22/216 (10%)
Query: 99 IDPGAYGEVYL-VKWRGTEIAAKTIRSSIASNPRVR---NSFM-----KELGLWQKLRHP 149
I G+YG V V G +A K + ++++ V +SF+ +E+ L HP
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 150 NIVQFLGVLKHSE-----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNY 204
NI+ + H E +L +TE +R I ++ + P + I G++
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 205 LHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
LH ++HRDL P N+L + + + DF L++ +D+ T Y AP
Sbjct: 150 LHEA---GVVHRDLHPGNILLADNNDITICDFNLAR----EDTADANKTHYVTHRWYRAP 202
Query: 265 E-VYRRESYGKSVDVFSFALIVHEMFQGGPSNRADT 299
E V + + + K VD++S ++ EMF R T
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 24/245 (9%)
Query: 111 KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRH-PNIVQFLGVLKHSERLIFLTE 169
K G E AAK ++ R + E+ + + + P ++ V +++ +I + E
Sbjct: 51 KSTGQEYAAKFLKKR-RRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE 109
Query: 170 YLRNGSLHDI-LKKKGKLDPPTAVAYAL-DIARGMNYLHHHRPHAIIHRDLTPSNVLQDE 227
Y G + + L + ++ V + I G+ YLH + I+H DL P N+L
Sbjct: 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSS 166
Query: 228 A---GHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALI 284
G +K+ DFG+S+ K ++ ++ G+ Y+APE+ + + D+++ +I
Sbjct: 167 IYPLGDIKIVDFGMSR----KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
Query: 285 VHEM------FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
+ + F G + + + E++ ++S L + I++LL KNP++
Sbjct: 223 AYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLV----KNPEK 278
Query: 339 RPTFE 343
RPT E
Sbjct: 279 RPTAE 283
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 57 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 115
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 116 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 170
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 171 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 46 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 104
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 105 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 159
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ MT + Y APEV Y ++VD++S I+ EM
Sbjct: 160 KILDFGLARTA----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 212
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 79 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 138
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 139 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 192
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 193 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 251
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 252 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 290
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 64 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 123
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 124 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 177
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 178 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 236
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 237 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 275
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 63 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 122
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 123 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 176
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 177 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 235
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 236 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 274
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 71 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 130
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 131 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 184
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 185 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 243
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 244 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 282
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 69 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 128
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 129 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 182
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 183 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 241
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 242 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 280
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 65 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 125 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 178
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 179 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 237
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 238 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 276
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 70 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 129
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 130 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 183
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 184 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 242
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 243 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 281
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 65 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 125 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 178
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 179 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 237
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 238 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 276
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 115 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 174
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 175 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 228
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 229 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 287
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 288 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 326
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 109 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 168
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 169 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 222
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 223 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 281
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 282 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 320
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 24/220 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKG--KLDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 63 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 122
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K +S +T
Sbjct: 123 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LT 175
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
+ Y+APEV E Y KS D++S +I++ + G P ++ + ++
Sbjct: 176 EPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 235
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEII 346
YE P S + E +K L+R P +R T E +
Sbjct: 236 GQYEFPNPEWSEV-SEEVKMLIRNLLKTEPTQRMTITEFM 274
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ M + Y APEV Y ++VD++S I+ EM
Sbjct: 166 KILDFGLARTA----GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 148 HPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHH 207
HPNIV+ V + E L G L + +KKK A + ++++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH- 123
Query: 208 HRPHAIIHRDLTPSNVL-QDEAGHL--KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAP 264
++HRDL P N+L DE +L K+ DFG +++ + D+ K T Y AP
Sbjct: 124 --DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-KPPDNQPLKTPCFT--LHYAAP 178
Query: 265 EVYRRESYGKSVDVFSFALIVHEMFQG 291
E+ + Y +S D++S +I++ M G
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSG 205
>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s
pdb|2XZT|H Chain H, Caspase-3 In Complex With Darpin-3.4_i78s
Length = 136
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D T LHLA+ G EIV +LL+ GADVN+
Sbjct: 17 KLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNAS 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRG 97
D WGRTPL A + GH+ I ++L + G
Sbjct: 77 DSWGRTPLHLAATVGHLEIVEVLLEYG 103
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 4 IDSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEK 63
+D G L + +G V L+ G + N +D RT LHLA++ G EIV +LLE
Sbjct: 43 MDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEY 102
Query: 64 GADVNSLDRWGRTPLSDARSFGHVVICKILE 94
GADVN+ D++G+T + G+ + +IL+
Sbjct: 103 GADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 94 EDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPR--VRNSFMKELGLWQKLRHP 149
E I G +GEV+ + R G ++A K + + N + + ++E+ + Q L+H
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHE 77
Query: 150 NIVQFLGVL----------KHSERLIF-LTEYLRNGSLHDILKKKGKLDPPTAVAYALDI 198
N+V + + K S L+F E+ G L ++L K + + L+
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN- 136
Query: 199 ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTG 257
G+ Y+H ++ I+HRD+ +NVL G LK+ DFGL++ + K+S +
Sbjct: 137 --GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 258 SYRYMAPEVYRRE-SYGKSVDVFSFALIVHEMFQGGPSNRADT 299
+ Y PE+ E YG +D++ I+ EM+ P + +T
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 94 EDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPR--VRNSFMKELGLWQKLRHP 149
E I G +GEV+ + R G ++A K + + N + + ++E+ + Q L+H
Sbjct: 20 EKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHE 76
Query: 150 NIVQFLGVL----------KHSERLIF-LTEYLRNGSLHDILKKKGKLDPPTAVAYALDI 198
N+V + + K S L+F E+ G L ++L K + + L+
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN- 135
Query: 199 ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTG 257
G+ Y+H ++ I+HRD+ +NVL G LK+ DFGL++ + K+S +
Sbjct: 136 --GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 258 SYRYMAPEVYRRE-SYGKSVDVFSFALIVHEMFQGGPSNRADT 299
+ Y PE+ E YG +D++ I+ EM+ P + +T
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V K G +A K I P ++E+ + + +H NI+ + +
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEP--FDKPLFALRTLREIKILKHFKHENIITIFNIQR 79
Query: 160 ----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL-DIARGMNYLHHHRPHAII 214
+ +++ + L LH ++ + D + Y + R + LH +I
Sbjct: 80 PDSFENFNEVYIIQELMQTDLHRVISTQMLSD--DHIQYFIYQTLRAVKVLHGSN---VI 134
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTG---GTGSYR----YMAPEVY 267
HRDL PSN+L + LKV DFGL++I E + + + TG G Y Y APEV
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVM 194
Query: 268 RRES-YGKSVDVFSFALIVHEMFQGGP 293
+ Y +++DV+S I+ E+F P
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERL-----IFLTEYL 171
+A K + + + ++ +EL L + + H NI+ L V + L +++ L
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 172 RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHL 231
+ +L +++ + LD + G+ +LH IIHRDL PSN++ L
Sbjct: 111 MDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 232 KVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEM 288
K+ DFGL++ A S+ M + Y APEV Y ++VD++S I+ EM
Sbjct: 166 KILDFGLARTA----GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 218
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V K G +A K I P ++E+ + + +H NI+ + +
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEP--FDKPLFALRTLREIKILKHFKHENIITIFNIQR 79
Query: 160 ----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL-DIARGMNYLHHHRPHAII 214
+ +++ + L LH ++ + D + Y + R + LH +I
Sbjct: 80 PDSFENFNEVYIIQELMQTDLHRVISTQMLSD--DHIQYFIYQTLRAVKVLHGSN---VI 134
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK-------MTGGTGSYRYMAPEVY 267
HRDL PSN+L + LKV DFGL++I E + + + MT + Y APEV
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVM 194
Query: 268 RRES-YGKSVDVFSFALIVHEMFQGGP 293
+ Y +++DV+S I+ E+F P
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 99 IDPGAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNS-FMKELGLWQKLRHPNIVQFLG 156
I GA+GEV +VK + TE I A I + R + F +E + I
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ L + +Y G L +L K + KL A Y ++ ++ +H +H
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH---YVH 198
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES---- 271
RD+ P NVL D GH+++ DFG + D + + + G+ Y++PE+ +
Sbjct: 199 RDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 272 -YGKSVDVFSFALIVHEMFQGGPSNRADTAVQV 303
YG D +S + ++EM G A++ V+
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 94 EDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPR--VRNSFMKELGLWQKLRHP 149
E I G +GEV+ + R G ++A K + + N + + ++E+ + Q L+H
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHE 77
Query: 150 NIVQFLGVL----------KHSERLIF-LTEYLRNGSLHDILKKKGKLDPPTAVAYALDI 198
N+V + + K S L+F E+ G L ++L K + + L+
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN- 136
Query: 199 ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTG 257
G+ Y+H ++ I+HRD+ +NVL G LK+ DFGL++ + K+S +
Sbjct: 137 --GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 258 SYRYMAPEVYRRE-SYGKSVDVFSFALIVHEMFQGGPSNRADT 299
+ Y PE+ E YG +D++ I+ EM+ P + +T
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 99 IDPGAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNS-FMKELGLWQKLRHPNIVQFLG 156
I GA+GEV +VK + TE I A I + R + F +E + I
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ L + +Y G L +L K + KL A Y ++ ++ +H +H
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH---YVH 214
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRES---- 271
RD+ P NVL D GH+++ DFG + D + + + G+ Y++PE+ +
Sbjct: 215 RDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 272 -YGKSVDVFSFALIVHEMFQGGPSNRADTAVQV 303
YG D +S + ++EM G A++ V+
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPFYAESLVET 305
>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4
pdb|2XZD|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4
Length = 136
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D T LHLA+ G EIV +LL+ GADVN+
Sbjct: 17 KLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNAS 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRG 97
D WGRTPL A + GH+ I ++L + G
Sbjct: 77 DIWGRTPLHLAATVGHLEIVEVLLEYG 103
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 4 IDSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEK 63
+D G L + +G V L+ G + N +D RT LHLA++ G EIV +LLE
Sbjct: 43 MDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEY 102
Query: 64 GADVNSLDRWGRTPLSDARSFGHVVICKILE 94
GADVN+ D++G+T + G+ + +IL+
Sbjct: 103 GADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 132 VRNSFMKELG-LWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPT 190
+R+ +E+ L+Q H N+++ + + +R + E +R GS+ + K+ +
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE 112
Query: 191 AVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGL-SKIAQEKD 246
A D+A +++LH+ I HRDL P N+L ++ +K+ DF L S I D
Sbjct: 113 ASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169
Query: 247 S---YSYKMTGGTGSYRYMAPEVYRRES-----YGKSVDVFSFALIVHEMFQGGP 293
+ ++ GS YMAPEV S Y K D++S +I++ + G P
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
GAYG V K G +A K I P ++E+ + + +H NI+ + +
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEP--FDKPLFALRTLREIKILKHFKHENIITIFNIQR 79
Query: 160 ----HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL-DIARGMNYLHHHRPHAII 214
+ +++ + L LH ++ + D + Y + R + LH +I
Sbjct: 80 PDSFENFNEVYIIQELMQTDLHRVISTQMLSD--DHIQYFIYQTLRAVKVLHGSN---VI 134
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGG-------TGSYRYMAPEVY 267
HRDL PSN+L + LKV DFGL++I E + + + TG + Y APEV
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM 194
Query: 268 RRES-YGKSVDVFSFALIVHEMFQGGP 293
+ Y +++DV+S I+ E+F P
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 94 EDRGGIDPGAYGEVYLVKWR--GTEIAAKTIRSSIASNPR--VRNSFMKELGLWQKLRHP 149
E I G +GEV+ + R G ++A K + + N + + ++E+ + Q L+H
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHE 77
Query: 150 NIVQFLGVL----------KHSERLIF-LTEYLRNGSLHDILKKKGKLDPPTAVAYALDI 198
N+V + + K S L+F E+ G L ++L K + + L+
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN- 136
Query: 199 ARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDSYSYKMTGGTG 257
G+ Y+H ++ I+HRD+ +NVL G LK+ DFGL++ + K+S +
Sbjct: 137 --GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 258 SYRYMAPEVYRRE-SYGKSVDVFSFALIVHEMFQGGPSNRADT 299
+ Y PE+ E YG +D++ I+ EM+ P + +T
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 143 WQKLRHPNIVQFLGVLKH----SERLIFLTEYLRNGSLHDILKKKGK--LDPPTAVAYAL 196
W+ + P+IV+ + V ++ + L+ + E L G L ++ +G A
Sbjct: 109 WRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXK 168
Query: 197 DIARGMNYLHHHRPHAIIHRDLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMT 253
I + YLH I HRD+ P N+L + LK+TDFG +K E S++ T
Sbjct: 169 SIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTT 222
Query: 254 GGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVAD-------R 306
Y Y+APEV E Y KS D +S +I + + G P ++ + ++
Sbjct: 223 PCYTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRX 281
Query: 307 RAYEDSRPALSSLYPEPIKALLRECWHKNPDRRPTFEEI 345
YE P S + E +K L+R P +R T E
Sbjct: 282 GQYEFPNPEWSEV-SEEVKXLIRNLLKTEPTQRXTITEF 319
>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
pdb|2Y0B|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
Length = 136
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D T LHLA+ G EIV +LL+ GADVN+
Sbjct: 17 KLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNAR 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRG 97
D WGRTPL A + GH+ I ++L + G
Sbjct: 77 DIWGRTPLHLAATVGHLEIVEVLLEYG 103
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 4 IDSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEK 63
+D G L + +G V L+ G + N D RT LHLA++ G EIV +LLE
Sbjct: 43 MDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEY 102
Query: 64 GADVNSLDRWGRTPLSDARSFGHVVICKILE 94
GADVN+ D++G+T + G+ + +IL+
Sbjct: 103 GADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|E Chain E, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|F Chain F, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
Length = 154
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D+ RT LH+A++ G EIV +LL GADVN++
Sbjct: 5 KLLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAV 64
Query: 71 DRWGRTPLSDARSFGHVVICKIL---------EDRGGIDPGAYGEVYLVKWRG 114
D G TPL A S GH+ I ++L +D GI P +YL + G
Sbjct: 65 DTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITP-----LYLAAYWG 112
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L G + N D + T LHLA+S G EIV +LL+ GADVN+ D G TPL A +GH+
Sbjct: 55 LRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHL 114
Query: 88 VICKILEDRG 97
I ++L G
Sbjct: 115 EIVEVLLKHG 124
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 4 IDSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEK 63
+D+ G L +S G V L+ G + N D T L+LA+ G EIV +LL+
Sbjct: 64 VDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKH 123
Query: 64 GADVNSLDRWGRTPLSDARSFGHVVICKILE 94
GADVN+ D++G+T + G+ + +IL+
Sbjct: 124 GADVNAQDKFGKTAFDISIDIGNEDLAEILQ 154
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 24/269 (8%)
Query: 102 GAYGEVYLVKWRGTEI--AAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G++GEV + +GT I AAK I + + F +E+ + + L HPNI++ +
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 160 HSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLT 219
+ + + E G L + + K A D+ + Y H + HRDL
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLK 133
Query: 220 PSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSV 276
P N L LK+ DFGL+ + M G+ Y++P+V YG
Sbjct: 134 PENFLFLTDSPDSPLKLIDFGLAA----RFKPGKMMRTKVGTPYYVSPQVL-EGLYGPEC 188
Query: 277 DVFSFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEP-IKALLRECWHK 334
D +S ++++ + G P A T +V + R + P L P ++L+R K
Sbjct: 189 DEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 248
Query: 335 NPDRRPTFEEIIFRLEAIQESFQKKTVPS 363
+P +R I L+A++ + +K + S
Sbjct: 249 SPKQR------ITSLQALEHEWFEKQLSS 271
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 35/254 (13%)
Query: 126 IASNPRVRN-SFMKELGLWQKLR-HPNIVQFLGVLKHSER--------LIFLTEYLRNGS 175
+ SN +N + ++E+ +KL HPNIVQF + + LTE L G
Sbjct: 61 LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE-LCKGQ 119
Query: 176 LHDILKK---KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLK 232
L + LKK +G L T + R + ++H +P IIHRDL N+L G +K
Sbjct: 120 LVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIK 178
Query: 233 VTDFGLSKIAQEKDSYSY----------KMTGGTGSYRYMAPEV---YRRESYGKSVDVF 279
+ DFG + YS+ ++T T + Y PE+ Y G+ D++
Sbjct: 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNT-TPMYRTPEIIDLYSNFPIGEKQDIW 237
Query: 280 SFALIVHEM-FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRECWHKNPDR 338
+ I++ + F+ P V + S P + Y +L+R NP+
Sbjct: 238 ALGCILYLLCFRQHPFEDGAKLRIVNGKY----SIPPHDTQY-TVFHSLIRAMLQVNPEE 292
Query: 339 RPTFEEIIFRLEAI 352
R + E++ +L+ I
Sbjct: 293 RLSIAEVVHQLQEI 306
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 31/261 (11%)
Query: 102 GAYGEVYLVKW--RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQK-LRHPNIVQFLGVL 158
GAYG V + G A K IR+++ S + R + +L + + + P V F G L
Sbjct: 45 GAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKR--LLXDLDISXRTVDCPFTVTFYGAL 102
Query: 159 KHSERLIFLTEYLRNGSLHDILKK---KGKLDPPTAVA-YALDIARGMNYLHHHRPHAII 214
E +++ L + SL K+ KG+ P + A+ I + + +LH ++I
Sbjct: 103 -FREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVI 159
Query: 215 HRDLTPSNVLQDEAGHLKVTDFGLS-----KIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
HRD+ PSNVL + G +K DFG+S +A++ D+ G Y APE
Sbjct: 160 HRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---------GCKPYXAPERINP 210
Query: 270 E----SYGKSVDVFSFALIVHEM-FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPI 324
E Y D++S + E+ P + T Q + E S + +
Sbjct: 211 ELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEF 270
Query: 325 KALLRECWHKNPDRRPTFEEI 345
+C KN RPT+ E+
Sbjct: 271 VDFTSQCLKKNSKERPTYPEL 291
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein
Length = 166
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D D T LHLA+S G EIV +LL+ GADVN+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNAS 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRGGIDPGAY 104
D G TPL A + GH+ I ++L + G D AY
Sbjct: 77 DLTGITPLHLAAATGHLEIVEVLL-KHGADVNAY 109
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D++G L +S G V L+ G + N +D T LHLA++ G EIV +LL+ G
Sbjct: 44 DNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHG 103
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
ADVN+ D G TPL A +GH+ I ++L G
Sbjct: 104 ADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHG 136
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D D T LHLA+ G EIV +LL+ GADVN+ D++G+T + G+
Sbjct: 100 LKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 88 VICKILE 94
+ +IL+
Sbjct: 160 DLAEILQ 166
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 137 MKELGLWQKLRHPNIVQFLGVLKHS--ERLIFLTEYLRNGSLHDILKKKGK---LDPPTA 191
M+E + +KL H NIV+ + + + + + E+ GSL+ +L++ L
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 192 VAYALDIARGMNYLHHHRPHAIIHRDLTPSNVL----QDEAGHLKVTDFGLSKIAQEKDS 247
+ D+ GMN+L R + I+HR++ P N++ +D K+TDFG ++ ++ +
Sbjct: 115 LIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171
Query: 248 YSYKMTGGTGSYRYMAPEVYRR--------ESYGKSVDVFSFALIVHEMFQG 291
+ G+ Y+ P++Y R + YG +VD++S + + G
Sbjct: 172 FVXLY----GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 24/272 (8%)
Query: 99 IDPGAYGEVYLVKWRGTEI--AAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLG 156
I G++GEV + +GT I AAK I + + F +E+ + + L HPNI++
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHR 216
+ + + + E G L + + K A D+ + Y H + HR
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN---VAHR 147
Query: 217 DLTPSNVL---QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYG 273
DL P N L LK+ DFGL+ + M G+ Y++P+V YG
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLAA----RFKPGKMMRTKVGTPYYVSPQVL-EGLYG 202
Query: 274 KSVDVFSFALIVHEMFQGGPSNRADTAVQVADR-RAYEDSRPALSSLYPEP-IKALLREC 331
D +S ++++ + G P A T +V + R + P L P ++L+R
Sbjct: 203 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRL 262
Query: 332 WHKNPDRRPTFEEIIFRLEAIQESFQKKTVPS 363
K+P +R I L+A++ + +K + S
Sbjct: 263 LTKSPKQR------ITSLQALEHEWFEKQLSS 288
>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure
Length = 115
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 46/83 (55%)
Query: 16 SSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGR 75
+ G V + L KG + N D T LHLA+ G AEIV LLL KGADVN+ + G
Sbjct: 17 AKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGN 76
Query: 76 TPLSDARSFGHVVICKILEDRGG 98
TP A+ GH I K+L+ +G
Sbjct: 77 TPEHLAKKNGHHEIVKLLDAKGA 99
Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 13 LYCSSKGDRAGVLQEL-EKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLD 71
L+ ++K A +++ L KG + N D T HLA G EIV LL KGADVN+
Sbjct: 46 LHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA-R 104
Query: 72 RWGRT 76
WG +
Sbjct: 105 SWGSS 109
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 137 MKELGLWQKLRHPNIVQFLGVLKHS--ERLIFLTEYLRNGSLHDILKKKGKLD--PPTAV 192
M+E + +KL H NIV+ + + + + + E+ GSL+ +L++ P +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 193 AYAL-DIARGMNYLHHHRPHAIIHRDLTPSNVL----QDEAGHLKVTDFGLSKIAQEKDS 247
L D+ GMN+L R + I+HR++ P N++ +D K+TDFG ++ ++ +
Sbjct: 115 LIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171
Query: 248 YSYKMTGGTGSYRYMAPEVYRR--------ESYGKSVDVFSFALIVHEMFQG 291
+ G+ Y+ P++Y R + YG +VD++S + + G
Sbjct: 172 F----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex)
Length = 169
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D+ G L ++ G V L+ G + N D T LHLA+ G EIV +LL+ G
Sbjct: 44 DASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHG 103
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
ADVN++D WG TPL A GH+ I ++L G
Sbjct: 104 ADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHG 136
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D T LHLA++ G EIV +LL+ GADVN++
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAI 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRG 97
D G TPL A GH+ I ++L G
Sbjct: 77 DIXGSTPLHLAALIGHLEIVEVLLKHG 103
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D T LHLA+ G EIV +LL+ GADVN+ D++G+T + G+
Sbjct: 100 LKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 88 VICKILE 94
+ +IL+
Sbjct: 160 DLAEILQ 166
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 29/273 (10%)
Query: 83 SFGHVVICKILEDRGGIDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFM-KELG 141
+FG VV + R +D Y + K R TE TI S + + + ++ +
Sbjct: 18 AFGQVV-----KARNALDSRYYA---IKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 142 LWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYAL--DIA 199
W L N V+ +K L EY N +L+D++ + L+ + L I
Sbjct: 70 AW--LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQIL 126
Query: 200 RGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKI-----------AQEKDSY 248
++Y+H IIHR+L P N+ DE+ ++K+ DFGL+K +Q
Sbjct: 127 EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 249 SYKMTGGTGSYRYMAPEVYRRES-YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRR 307
S +T G+ Y+A EV Y + +D +S +I E + + R
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRS 243
Query: 308 AYEDSRPALSSLYPEPIKALLRECWHKNPDRRP 340
+ P + K ++R +P++RP
Sbjct: 244 VSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRP 276
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 36/227 (15%)
Query: 102 GAYGEVYLVKWRGTE--IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLK 159
G+YG VYL + TE +A K + + ++E+ + +L+ I++ ++
Sbjct: 37 GSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCK-RILREITILNRLKSDYIIRLYDLII 95
Query: 160 HSERLIFLTEYL----RNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ L F Y+ + L + K L ++ G N++H IIH
Sbjct: 96 PDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIH 152
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSK-IAQEKDS------------------YSYKMTGGT 256
RDL P+N L ++ +KV DFGL++ I EKD+ ++T
Sbjct: 153 RDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHV 212
Query: 257 GSYRYMAPE-VYRRESYGKSVDVFSFALIVHEMFQ------GGPSNR 296
+ Y APE + +E+Y KS+D++S I E+ P+NR
Sbjct: 213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 28/256 (10%)
Query: 102 GAYGEVYLV--KWRGTEIAAKTIRSSIA------SNPRVRNSFMKELGLWQKLRHPNIVQ 153
GA+G V+ K + E+ K I+ +P++ + E+ + ++ H NI++
Sbjct: 35 GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL-EIAILSRVEHANIIK 93
Query: 154 FLGVLKHSERLIFLTEYLRNG-SLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHA 212
L + ++ + E +G L + + +LD P A + + YL R
Sbjct: 94 VLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYL---RLKD 150
Query: 213 IIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESY 272
IIHRD+ N++ E +K+ DFG S E+ Y G+ Y APEV Y
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFG-SAAYLERGKLFYTF---CGTIEYCAPEVLMGNPY 206
Query: 273 -GKSVDVFSFALIVHEM-FQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLRE 330
G ++++S + ++ + F+ P + V+ A Y S+ +S + LL+
Sbjct: 207 RGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSL-----VSGLLQP 261
Query: 331 CWHKNPDRRPTFEEII 346
P+RR T E+++
Sbjct: 262 V----PERRTTLEKLV 273
>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin
pdb|4DRX|F Chain F, Gtp-Tubulin In Complex With A Darpin
Length = 169
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D+ G L ++ G V L+ G + N D T LHLA+ G EIV +LL+ G
Sbjct: 44 DASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHG 103
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
ADVN++D WG TPL A GH+ I ++L G
Sbjct: 104 ADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHG 136
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D T LHLA++ G EIV +LL+ GADVN++
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAI 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRG 97
D G TPL A GH+ I ++L G
Sbjct: 77 DIMGSTPLHLAALIGHLEIVEVLLKHG 103
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D T LHLA+ G EIV +LL+ GADVN+ D++G+T + G+
Sbjct: 100 LKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 88 VICKILE 94
+ +IL+
Sbjct: 160 DLAEILQ 166
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR-HPNIVQFLGV 157
I G +V+ V +I A + ++ + +S+ E+ KL+ H + + L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +++ I++ N L+ LKKK +DP +Y ++ ++ +H H I+H D
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSD 180
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS-- 275
L P+N L + G LK+ DFG++ Q D+ S G+ YM PE + S +
Sbjct: 181 LKPANFLIVD-GMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 276 ---------VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE---- 322
DV+S I++ M G + Q++ A D P +P+
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-IINQISKLHAIID--PNHEIEFPDIPEK 295
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
++ +L+ C ++P +R + E++
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D D T LHLA+ EG EIV +LL+ GADVN+ D++G+TP A GH
Sbjct: 88 LKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGHE 147
Query: 88 VICKILE 94
I ++L+
Sbjct: 148 DIAEVLQ 154
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D D T LHLA+ EG EIV +LL+ GADVN+
Sbjct: 5 KLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAK 64
Query: 71 DRWGRTPLSDARSFGHVVICKIL 93
D+ G TPL A GH+ I ++L
Sbjct: 65 DKDGYTPLHLAAREGHLEIVEVL 87
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D D T LHLA+ EG EIV +LL+ GADVN+ D+ G TPL A GH+
Sbjct: 55 LKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHL 114
Query: 88 VICKIL 93
I ++L
Sbjct: 115 EIVEVL 120
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR-HPNIVQFLGV 157
I G +V+ V +I A + ++ + +S+ E+ KL+ H + + L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +++ I++ N L+ LKKK +DP +Y ++ ++ +H H I+H D
Sbjct: 76 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSD 132
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS-- 275
L P+N L + G LK+ DFG++ Q D+ S G+ YM PE + S +
Sbjct: 133 LKPANFLIVD-GMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 190
Query: 276 ---------VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE---- 322
DV+S I++ M G + Q++ A D P +P+
Sbjct: 191 KSKSKISPKSDVWSLGCILYYMTYGK-TPFQQIINQISKLHAIID--PNHEIEFPDIPEK 247
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
++ +L+ C ++P +R + E++
Sbjct: 248 DLQDVLKCCLKRDPKQRISIPELL 271
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR-HPNIVQFLGV 157
I G +V+ V +I A + ++ + +S+ E+ KL+ H + + L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +++ I++ N L+ LKKK +DP +Y ++ ++ +H H I+H D
Sbjct: 80 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSD 136
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS-- 275
L P+N L + G LK+ DFG++ Q D+ S G+ YM PE + S +
Sbjct: 137 LKPANFLIVD-GMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 194
Query: 276 ---------VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE---- 322
DV+S I++ M G + Q++ A D P +P+
Sbjct: 195 KSKSKISPKSDVWSLGCILYYMTYGK-TPFQQIINQISKLHAIID--PNHEIEFPDIPEK 251
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
++ +L+ C ++P +R + E++
Sbjct: 252 DLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR-HPNIVQFLGV 157
I G +V+ V +I A + ++ + +S+ E+ KL+ H + + L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +++ I++ N L+ LKKK +DP +Y ++ ++ +H H I+H D
Sbjct: 96 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSD 152
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS-- 275
L P+N L + G LK+ DFG++ Q D+ S G+ YM PE + S +
Sbjct: 153 LKPANFLIVD-GMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 210
Query: 276 ---------VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE---- 322
DV+S I++ M G + Q++ A D P +P+
Sbjct: 211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-IINQISKLHAIID--PNHEIEFPDIPEK 267
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
++ +L+ C ++P +R + E++
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 21/186 (11%)
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQF--------------LGVLKHSERLIFL 167
I+ + ++P+ ++E+ + ++L H NIV+ +G L + +
Sbjct: 41 IKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIV 100
Query: 168 TEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNV-LQD 226
EY+ L ++L++ G L A + + RG+ Y+H ++HRDL P+N+ +
Sbjct: 101 QEYMET-DLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINT 155
Query: 227 EAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ESYGKSVDVFSFALIV 285
E LK+ DFGL++I S+ ++ G + Y +P + +Y K++D+++ I
Sbjct: 156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 215
Query: 286 HEMFQG 291
EM G
Sbjct: 216 AEMLTG 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Query: 102 GAYGEVYLVKWR--GTEIAAKTIRSSIASNPRVRNSFMKELGLWQKL-RHPNIVQFLGVL 158
G+YGEV+ V+ + G A K S P+ R + E+G +K+ +HP V+
Sbjct: 68 GSYGEVFKVRSKEDGRLYAVKRSMSPF-RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW 126
Query: 159 KHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAV-AYALDIARGMNYLHHHRPHAIIHRD 217
+ L TE L SL + G P V Y D + +LH ++H D
Sbjct: 127 EEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLD 182
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVD 277
+ P+N+ G K+ DFGL + + + + ++ G RYMAPE+ + SYG + D
Sbjct: 183 VKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQ--EGDPRYMAPELL-QGSYGTAAD 237
Query: 278 VFSFALIVHEM 288
VFS L + E+
Sbjct: 238 VFSLGLTILEV 248
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR-HPNIVQFLGV 157
I G +V+ V +I A + ++ + +S+ E+ KL+ H + + L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +++ I++ N L+ LKKK +DP +Y ++ ++ +H H I+H D
Sbjct: 77 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSD 133
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS-- 275
L P+N L + G LK+ DFG++ Q D+ S G+ YM PE + S +
Sbjct: 134 LKPANFLIVD-GMLKLIDFGIANQMQP-DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 191
Query: 276 ---------VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE---- 322
DV+S I++ M G + Q++ A D P +P+
Sbjct: 192 KSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIID--PNHEIEFPDIPEK 248
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
++ +L+ C ++P +R + E++
Sbjct: 249 DLQDVLKCCLKRDPKQRISIPELL 272
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR-HPNIVQFLGV 157
I G +V+ V +I A + ++ + +S+ E+ KL+ H + + L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +++ I++ N L+ LKKK +DP +Y ++ ++ +H H I+H D
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSD 180
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS-- 275
L P+N L + G LK+ DFG++ Q D+ S G+ YM PE + S +
Sbjct: 181 LKPANFLIVD-GMLKLIDFGIANQMQP-DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 276 ---------VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE---- 322
DV+S I++ M G + Q++ A D P +P+
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIID--PNHEIEFPDIPEK 295
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
++ +L+ C ++P +R + E++
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGV-LKH 160
G YG VY K + + I + S +E+ L ++L+HPN++ V L H
Sbjct: 32 GTYGHVYKAKRKDGKDDKDYALKQIEGT-GISMSACREIALLRELKHPNVISLQKVFLSH 90
Query: 161 SERLIFLTEYLRNGSLHDILK-------KKGKLDPPTAVAYAL--DIARGMNYLHHHRPH 211
++R ++L L I+K K + P + +L I G++YLH +
Sbjct: 91 ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---AN 147
Query: 212 AIIHRDLTPSNVL----QDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVY 267
++HRDL P+N+L E G +K+ D G +++ + ++ Y APE+
Sbjct: 148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 207
Query: 268 R-RESYGKSVDVFSFALIVHEMFQGGP 293
Y K++D+++ I E+ P
Sbjct: 208 LGARHYTKAIDIWAIGCIFAELLTSEP 234
>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex
Length = 169
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D +T LHLA+ +G EIV +LL+ GADVN+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAA 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRG 97
D+ G TPL A +GH+ I ++L G
Sbjct: 77 DKMGDTPLHLAALYGHLEIVEVLLKNG 103
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 48/89 (53%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D G L + KG V L+ G + N AD T LHLA+ G EIV +LL+ G
Sbjct: 44 DDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLLKNG 103
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKIL 93
ADVN+ D +G TPL A GH+ I ++L
Sbjct: 104 ADVNATDTYGFTPLHLAADAGHLEIVEVL 132
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D T LHLA+ G EIV +LL+ GADVN+ D++G+T + G+
Sbjct: 100 LKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNE 159
Query: 88 VICKILE 94
+ +IL+
Sbjct: 160 DLAEILQ 166
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR-HPNIVQFLGV 157
I G +V+ V +I A + ++ + +S+ E+ KL+ H + + L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +++ I++ N L+ LKKK +DP +Y ++ ++ +H H I+H D
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSD 180
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS-- 275
L P+N L + G LK+ DFG++ Q D+ S G+ YM PE + S +
Sbjct: 181 LKPANFLIVD-GMLKLIDFGIANQMQP-DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENG 238
Query: 276 ---------VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE---- 322
DV+S I++ M G + Q++ A D P +P+
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIID--PNHEIEFPDIPEK 295
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
++ +L+ C ++P +R + E++
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 25/163 (15%)
Query: 146 LRHPNIVQFLGVLKHSE----RLIFLTEYLRNGSLHDILKKKGKLDPPTAVAY-ALDIAR 200
++H N++QF+ K L +T + GSL D LK G + + + A ++R
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK--GNIITWNELCHVAETMSR 123
Query: 201 GMNYLHH---------HRPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYK 251
G++YLH H+P +I HRD NVL + DFGL+ + E
Sbjct: 124 GLSYLHEDVPWCRGEGHKP-SIAHRDFKSKNVLLKSDLTAVLADFGLA-VRFEPGKPPGD 181
Query: 252 MTGGTGSYRYMAPEV------YRRESYGKSVDVFSFALIVHEM 288
G G+ RYMAPEV ++R+++ + +D+++ L++ E+
Sbjct: 182 THGQVGTRRYMAPEVLEGAINFQRDAFLR-IDMYAMGLVLWEL 223
>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability
Of Designed Ankyrin Repeat Proteins With A Redesigned
C- Capping Module.
pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability
Of Designed Ankyrin Repeat Proteins With A Redesigned
C- Capping Module.
pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability
Of Designed Ankyrin Repeat Proteins With A Redesigned
C- Capping Module.
pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability
Of Designed Ankyrin Repeat Proteins With A Redesigned
C- Capping Module
Length = 157
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D D T LHLA+ EG EIV +LL+ GADVN+
Sbjct: 5 KLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAK 64
Query: 71 DRWGRTPLSDARSFGHVVICKIL 93
D+ G TPL A GH+ I ++L
Sbjct: 65 DKDGYTPLHLAAREGHLEIVEVL 87
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D D T LHLA+ EG EIV +LL+ GADVN+ D+ G TPL A GH+
Sbjct: 55 LKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHL 114
Query: 88 VICKIL 93
I ++L
Sbjct: 115 EIVEVL 120
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D D T LHLA+ EG EIV +LL+ GADVN+ D++G+TP A G+
Sbjct: 88 LKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNE 147
Query: 88 VICKILE 94
I ++L+
Sbjct: 148 DIAEVLQ 154
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 13/213 (6%)
Query: 99 IDPGAYGEVYLVKWRGTE-IAAKTIRSSIASNPRVRNS-FMKELGLWQKLRHPNIVQFLG 156
I GA+GEV +VK + + + A I + R + F +E + I
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 157 VLKHSERLIFLTEYLRNGSLHDILKK-KGKLDPPTAVAYALDIARGMNYLHHHRPHAIIH 215
+ L + +Y G L +L K + +L A Y ++ ++ +H +H
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVH 198
Query: 216 RDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR-----RE 270
RD+ P N+L D GH+++ DFG E + + GT Y++PE+ + +
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD--YISPEILQAMEGGKG 256
Query: 271 SYGKSVDVFSFALIVHEMFQGGPSNRADTAVQV 303
YG D +S + ++EM G A++ V+
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin
Length = 166
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D D T LHLA+ EG EIV +LL+ GADVN+ D+ G TPL A GH+
Sbjct: 67 LKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHL 126
Query: 88 VICKIL 93
I ++L
Sbjct: 127 EIVEVL 132
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D D T LHLA+ EG EIV +LL+ GADVN+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAK 76
Query: 71 DRWGRTPLSDARSFGHVVICKIL 93
D+ G TPL A GH+ I ++L
Sbjct: 77 DKDGYTPLHLAAREGHLEIVEVL 99
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D D T LHLA+ EG EIV +LL+ GADVN+ D++G+T + G+
Sbjct: 100 LKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNE 159
Query: 88 VICKILE 94
+ +IL+
Sbjct: 160 DLAEILQ 166
>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|Q Chain Q, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|R Chain R, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|S Chain S, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|T Chain T, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|U Chain U, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
Length = 169
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D+ T LHLA+ G EIV +LL+ GADVN+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAW 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRG 97
D +G TPL A GH+ I ++L G
Sbjct: 77 DNYGATPLHLAADNGHLEIVEVLLKHG 103
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D+ G L + G V L+ G + N DY+ T LHLA+ +G EIV +LL+ G
Sbjct: 77 DNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYG 136
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILE 94
ADVN+ D++G+T + G+ + +IL+
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D T LHLA+ G EIV +LL+ GADVN+ D G TPL A GH+
Sbjct: 67 LKYGADVNAWDNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHL 126
Query: 88 VICKIL 93
I ++L
Sbjct: 127 EIVEVL 132
>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
Length = 183
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D EG L++ ++ G A V L+ G +P L + +AL LA S+G +IV +LL+ G
Sbjct: 49 DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG 108
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGGIDP 101
DVN D G TPL A HV K+L + G DP
Sbjct: 109 VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA-DP 144
>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|2J8S|E Chain E, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|4DX5|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX5|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
Length = 169
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N AD T LHLA+ G EIV +LL+ GADVN+
Sbjct: 17 KLLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAY 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRG 97
D G TPL A FGH+ I ++L G
Sbjct: 77 DTLGSTPLHLAAHFGHLEIVEVLLKNG 103
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D T LHLA+ G EIV +LL+ GADVN+ D G TPL A + GH+
Sbjct: 67 LKNGADVNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHL 126
Query: 88 VICKIL 93
I ++L
Sbjct: 127 EIVEVL 132
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D + T LHLA++ G EIV +LL+ GADVN+ D++G+T + + G+
Sbjct: 100 LKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQDKFGKTAFDISINNGNE 159
Query: 88 VICKILE 94
+ +IL+
Sbjct: 160 DLAEILQ 166
>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 7 EGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGAD 66
+G L CSS GD VL+ LE+G + N A+ D TALH A + ++V L+E GA+
Sbjct: 40 DGAVFLAACSS-GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98
Query: 67 VNSLDRWGRTPLSDARSFGHVVICKILEDRGG 98
+N D G PL A S G++ I + L +G
Sbjct: 99 INQPDNEGWIPLHAAASCGYLDIAEYLISQGA 130
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 43 TALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHVVICKIL 93
TALH+A+++G E++ LL++ DVN D G TPL A +G C+IL
Sbjct: 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 39 YDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHVVICKILEDRGG 98
+D A S G E VL LLE+GAD+N + G T L A +V + K L + G
Sbjct: 38 FDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA 97
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 35 NLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPL 78
N+ DYD T LH A+ G+ E +L+E D+ ++++ G+T
Sbjct: 226 NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 88/224 (39%), Gaps = 6/224 (2%)
Query: 117 IAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLRNGSL 176
+A K +++S+P R +E +L+ P++V + +L + L
Sbjct: 62 VALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDL 121
Query: 177 HDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRDLTPSNVLQDEAGHLKVTDF 236
L+++G L PP AVA I + L HRD+ P N+L + DF
Sbjct: 122 AAXLRRQGPLAPPRAVAIVRQIG---SALDAAHAAGATHRDVKPENILVSADDFAYLVDF 178
Query: 237 GLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNR 296
G++ + D ++ G+ Y APE + D+++ +++E G P +
Sbjct: 179 GIA--SATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236
Query: 297 ADTAVQVADRRAYEDSRPA-LSSLYPEPIKALLRECWHKNPDRR 339
D RP+ + P A++ KNP+ R
Sbjct: 237 GDQLSVXGAHINQAIPRPSTVRPGIPVAFDAVIARGXAKNPEDR 280
>pdb|3SO8|A Chain A, Crystal Structure Of Ankra
Length = 162
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D EG L++ ++ G A V L+ G +P L + +AL LA S+G +IV +LL+ G
Sbjct: 31 DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG 90
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGGIDP 101
DVN D G TPL A HV K+L + G DP
Sbjct: 91 VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA-DP 126
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 33/271 (12%)
Query: 102 GAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHS 161
G YG+++ TE+ K + + + SF + + KL H ++V GV
Sbjct: 33 GDYGQLH-----ETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGVCFCG 84
Query: 162 ERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNY-LHHHRPHAIIHRDLTP 220
+ I + E+++ GSL LKK + + L++A+ + + +H + +IH ++
Sbjct: 85 DENILVQEFVKFGSLDTYLKKNKNC---INILWKLEVAKQLAWAMHFLEENTLIHGNVCA 141
Query: 221 SNVL-----QDEAGH---LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR-ES 271
N+L + G+ +K++D G+S KD ++ ++ PE ++
Sbjct: 142 KNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP-------WVPPECIENPKN 194
Query: 272 YGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKALLREC 331
+ D +SF + E+ GG ++ +A+ + + + R L + + L+ C
Sbjct: 195 LNLATDKWSFGTTLWEICSGG--DKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNC 252
Query: 332 WHKNPDRRPTFEEIIFRLEAIQESFQKKTVP 362
PD RP+F II L ++ F VP
Sbjct: 253 MDYEPDHRPSFRAIIRDLNSL---FTPDLVP 280
>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
pdb|3V31|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
Length = 167
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D EG L++ ++ G A V L+ G +P L + +AL LA S+G +IV +LL+ G
Sbjct: 33 DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG 92
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRGGIDP 101
DVN D G TPL A HV K+L + G DP
Sbjct: 93 VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA-DP 128
>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4
pdb|2Y1L|F Chain F, Caspase-8 In Complex With Darpin-8.4
Length = 169
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D T LHLA+ G EIV +LL+ GADVN++
Sbjct: 17 KLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAV 76
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRG 97
D G TPL A FGH+ I ++L G
Sbjct: 77 DHAGMTPLRLAALFGHLEIVEVLLKNG 103
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D+ T L LA+ G EIV +LL+ GADVN+ D G TPL A FGH+
Sbjct: 67 LKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL 126
Query: 88 VICKILEDRG 97
I ++L G
Sbjct: 127 EIVEVLLKNG 136
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D + T LHLA+ G EIV +LL+ GADVN+ D++G+T + G+
Sbjct: 100 LKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNE 159
Query: 88 VICKILE 94
+ +IL+
Sbjct: 160 DLAEILQ 166
>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9U|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
Length = 158
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL ++ G V + G + N D + T LHLA++ G+ EIV +LL+ GADVN+
Sbjct: 9 KLLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNAS 68
Query: 71 DRWGRTPLSDARSFGHVVICKILEDRGGIDPGAY 104
D G TPL A GH+ I ++L + G D AY
Sbjct: 69 DSAGITPLHLAAYDGHLEIVEVLL-KHGADVNAY 101
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D G L ++ G V L+ G + N +D T LHLA+ +G EIV +LL+ G
Sbjct: 36 DDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHG 95
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
ADVN+ DR G TPL A G + I ++L G
Sbjct: 96 ADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHG 128
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D T LHLA+ G+ EIV +LL+ GADVN+ D G T + + G
Sbjct: 92 LKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQE 151
Query: 88 VICKILE 94
+ +IL+
Sbjct: 152 DLAEILQ 158
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G+V VK ++ + + R +E+ + + LR + + V+
Sbjct: 105 IGKGSFGQV--VKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 159 KHSERLIF-----LTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHHHRPH 211
E F +T L + +L++++KK P +A I + ++ LH +R
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-- 220
Query: 212 AIIHRDLTPSNVLQDEAGH--LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
IIH DL P N+L + G +KV DFG S + + Y+ S Y APEV
Sbjct: 221 -IIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTX-----IQSRFYRAPEVILG 273
Query: 270 ESYGKSVDVFSFALIVHEMFQGGP 293
YG +D++S I+ E+ G P
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVL 158
I G++G+V VK ++ + + R +E+ + + LR + + V+
Sbjct: 105 IGKGSFGQV--VKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 159 KHSERLIF-----LTEYLRNGSLHDILKKKG--KLDPPTAVAYALDIARGMNYLHHHRPH 211
E F +T L + +L++++KK P +A I + ++ LH +R
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-- 220
Query: 212 AIIHRDLTPSNVLQDEAGH--LKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRR 269
IIH DL P N+L + G +KV DFG S + + Y+ S Y APEV
Sbjct: 221 -IIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTX-----IQSRFYRAPEVILG 273
Query: 270 ESYGKSVDVFSFALIVHEMFQGGP 293
YG +D++S I+ E+ G P
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 24/264 (9%)
Query: 99 IDPGAYGEVYLVKWRGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLR-HPNIVQFLGV 157
I G +V+ V +I A + ++ + +S+ E+ KL+ H + + L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 158 LKHSERLIFLTEYLRNGSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHRPHAIIHRD 217
+ +++ I++ N L+ LKKK +DP +Y ++ ++ +H H I+H D
Sbjct: 96 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSD 152
Query: 218 LTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYRRESYGKS-- 275
L P+N L + G LK+ DFG++ Q D G+ YM PE + S +
Sbjct: 153 LKPANFLIVD-GMLKLIDFGIANQMQ-PDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENG 210
Query: 276 ---------VDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPE---- 322
DV+S I++ M G + Q++ A D P +P+
Sbjct: 211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-IINQISKLHAIID--PNHEIEFPDIPEK 267
Query: 323 PIKALLRECWHKNPDRRPTFEEII 346
++ +L+ C ++P +R + E++
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 169
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D D T LHLA+ G EIV +LL+ GADVN+ D +G TPL A GH+
Sbjct: 67 LKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHL 126
Query: 88 VICKILEDRG 97
I ++L G
Sbjct: 127 EIVEVLLKHG 136
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 44/83 (53%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D T LHLA+ G EIV +LL+ GADVN+
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNAR 76
Query: 71 DRWGRTPLSDARSFGHVVICKIL 93
D G TPL A GH+ I ++L
Sbjct: 77 DTDGWTPLHLAADNGHLEIVEVL 99
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 5 DSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKG 64
D++G L + G V L+ G + N D T LHLA+ G EIV +LL+ G
Sbjct: 77 DTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHG 136
Query: 65 ADVNSLDRWGRTPLSDARSFGHVVICKILE 94
ADVN+ D++G+T + G+ + +IL+
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 48 ASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
A+ G+ + V +L+ GADVN+ D G TPL A GH I ++L G
Sbjct: 21 AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHG 70
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 48/277 (17%)
Query: 90 CKILEDRGGIDPGAYGEVYLVKW-RGTEIAAKTIRSSIASNPRVRNSFMKELGLWQKLRH 148
CK++ + G++G V+ K E+A K + + R +N +EL + + ++H
Sbjct: 45 CKVIGN------GSFGVVFQAKLVESDEVAIK----KVLQDKRFKN---RELQIMRIVKH 91
Query: 149 PNIVQFLGVL-----KHSERLI-----FLTEYLRNGSLHDILKKKGKLDPPTAVAYALDI 198
PN+V K E + ++ E + S H K K + Y +
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH-YAKLKQTMPMLLIKLYMYQL 150
Query: 199 ARGMNYLHHHRPHAIIHRDLTPSNVLQDE-AGHLKVTDFGLSKI--AQEKDSYSYKMTGG 255
R + Y+H I HRD+ P N+L D +G LK+ DFG +KI A E +
Sbjct: 151 LRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN------VSX 201
Query: 256 TGSYRYMAPE-VYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAV-QVAD--RRAYED 311
S Y APE ++ +Y ++D++S ++ E+ QG P ++ + Q+ + +
Sbjct: 202 ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261
Query: 312 SRPALSSLYPEPIKALLRECWHKNPDRRPTFEEIIFR 348
SR + ++ P ++ HK P RP +FR
Sbjct: 262 SREQIKTMNPNYME-------HKFPQIRPHPFSKVFR 291
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 19/198 (9%)
Query: 151 IVQFLGVLKHSERLIFLTEYLRN-GSLHDILKKKGKLDPPTAVAYALDIARGMNYLHHHR 209
+++ L + + + + E + L D + ++G L A ++ + + + H+
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC- 133
Query: 210 PHAIIHRDLTPSNVLQD-EAGHLKVTDFGLSKIAQEKDSYSYKMTGGTGSYRYMAPEVYR 268
++HRD+ N+L D G LK+ DFG + KD+ T G+ Y PE R
Sbjct: 134 --GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTV---YTDFDGTRVYSPPEWIR 186
Query: 269 RESY-GKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPALSSLYPEPIKAL 327
Y G+S V+S +++++M G D + R R +SS + L
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII----RGQVFFRQRVSS----ECQHL 238
Query: 328 LRECWHKNPDRRPTFEEI 345
+R C P RPTFEEI
Sbjct: 239 IRWCLALRPSDRPTFEEI 256
>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker
Length = 437
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 13 LYCSSK-GDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLD 71
L+C+++ G V LE PNLA T LH+A+ EG E VL LLEK A +
Sbjct: 84 LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT 143
Query: 72 RWGRTPLSDARSFGHVVICKILEDRGGIDPGAYGE 106
+ G TPL A +G V + ++L +R P A G+
Sbjct: 144 KKGFTPLHVAAKYGKVRVAELLLERDA-HPNAAGK 177
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 10 YRLLYCSSKGDRAGVLQEL-EKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVN 68
Y L+ ++K ++ V + L + G N T LHLA+ EG AE+V LLL K A+ N
Sbjct: 213 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN 272
Query: 69 SLDRWGRTPLSDARSFGHVVICKILEDRG---------GIDP----GAYGEVYLVKW--- 112
++ G TPL GHV + +L G G P YG + LVK+
Sbjct: 273 LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQ 332
Query: 113 RGTEIAAKT 121
++ AKT
Sbjct: 333 HQADVNAKT 341
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L++G PN+++ T LH+A+ G E+ LL+ A VN+ + +TPL A GH
Sbjct: 34 LQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHT 93
Query: 88 VICKIL 93
+ K+L
Sbjct: 94 NMVKLL 99
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Query: 7 EGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGAD 66
+G L + +G V L K NL + T LHL + EG + +L++ G
Sbjct: 244 QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM 303
Query: 67 VNSLDRWGRTPLSDARSFGHVVICKIL----EDRGGIDPGAYGEVYLVKWRG-TEIAAKT 121
V++ R G TPL A +G++ + K L D Y ++ +G T+I
Sbjct: 304 VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLL 363
Query: 122 IRSSIASNPRVRNSFMKELGLWQKLRHPNIVQFLGVLKHSERLIFLTEYLR 172
+++ + N V + L + ++L + ++ L V+ + +++ R
Sbjct: 364 LKNGASPN-EVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHR 413
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 2 QIIDSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLL 61
+ + G L + +G VL LEK T LH+A+ G+ + LLL
Sbjct: 107 NLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL 166
Query: 62 EKGADVNSLDRWGRTPLSDARSFGHVVICKILEDRGG 98
E+ A N+ + G TPL A ++ I K+L RGG
Sbjct: 167 ERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG 203
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ + N D +T LH A+ G +V LLLE A+ N G TPL A GHV
Sbjct: 67 LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV 126
Query: 88 -VICKILE 94
+ +LE
Sbjct: 127 ETVLALLE 134
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
LE+ PN A + T LH+A +IV LLL +G +S G TPL A V
Sbjct: 166 LERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQV 225
Query: 88 VICKILEDRGG 98
+ + L GG
Sbjct: 226 EVARSLLQYGG 236
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L +G P+ ++ T LH+A+ + + E+ LL+ G N+ G TPL A GH
Sbjct: 199 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHA 258
Query: 88 VICKIL 93
+ +L
Sbjct: 259 EMVALL 264
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 43 TALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHVVICK-ILEDRGGIDP 101
T LH+AS G IV LL++GA N + TPL A GH + K +L+++ ++
Sbjct: 16 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 102 GA 103
A
Sbjct: 76 KA 77
>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
pdb|2BKG|B Chain B, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
Length = 166
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 28 LEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHV 87
L+ G + N D+ T LHLA+ G EIV +LL+ GADVN+ D G TPL A GH+
Sbjct: 67 LKNGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHL 126
Query: 88 VICKIL 93
I ++L
Sbjct: 127 EIVEVL 132
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%)
Query: 11 RLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEKGADVNSL 70
+LL + G V + G + N D T LHLA+ G EIV +LL+ GADVN+L
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNAL 76
Query: 71 DRWGRTPLSDARSFGHVVICKIL 93
D G TPL A GH+ I ++L
Sbjct: 77 DFSGSTPLHLAAKRGHLEIVEVL 99
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 4 IDSEGPYRLLYCSSKGDRAGVLQELEKGVEPNLADYDKRTALHLASSEGRAEIVLLLLEK 63
+D G L + +G V L+ G + N D T LHLA+ G EIV +LL+
Sbjct: 76 LDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKY 135
Query: 64 GADVNSLDRWGRTPLSDARSFGHVVICKILE 94
GADVN+ D++G+T + G+ + +IL+
Sbjct: 136 GADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 48 ASSEGRAEIVLLLLEKGADVNSLDRWGRTPLSDARSFGHVVICKILEDRG 97
A+ G+ + V +L+ GADVN+ D +G TPL A GH+ I ++L G
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNG 70
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 155 LGVLKHSERLIFL---TEYLRNGSLHDILKKKGKLDPP---TAVAYALDIARGMNYLHHH 208
+G L+ S ++L + R +L D + ++ L+ + + IA + +LH
Sbjct: 124 VGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK 183
Query: 209 RPHAIIHRDLTPSNVLQDEAGHLKVTDFGLSKIAQEKDSYSYKMT---------GGTGSY 259
++HRDL PSN+ +KV DFGL + + +T G G+
Sbjct: 184 ---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTK 240
Query: 260 RYMAPEVYRRESYGKSVDVFSFALIVHEMFQGGPSNRADTAVQVADRRAYEDSRPAL-SS 318
YM+PE +Y VD+FS LI+ E+ S + + + D R + P L +
Sbjct: 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF-STQMERVRIITDVRNLK--FPLLFTQ 297
Query: 319 LYPEPIKALLRECWHKNPDRRPTFEEII 346
YP+ ++++ +P RP +II
Sbjct: 298 KYPQE-HMMVQDMLSPSPTERPEATDII 324
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,756,850
Number of Sequences: 62578
Number of extensions: 509441
Number of successful extensions: 4673
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 1442
Number of HSP's gapped (non-prelim): 1454
length of query: 370
length of database: 14,973,337
effective HSP length: 100
effective length of query: 270
effective length of database: 8,715,537
effective search space: 2353194990
effective search space used: 2353194990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)