Query 042316
Match_columns 90
No_of_seqs 100 out of 120
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 08:20:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042316.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/042316hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1f35a_ b.94.1.1 (A:) Olfactor 22.4 12 0.0009 24.9 0.8 10 76-85 132-141 (162)
2 d1q33a_ d.113.1.1 (A:) NUDT9 ( 15.3 11 0.00079 26.4 -0.9 8 83-90 103-110 (292)
3 d1v54e_ a.118.11.1 (E:) Cytoch 11.8 61 0.0045 20.0 2.1 18 10-27 57-75 (105)
4 d1afsa_ c.1.7.1 (A:) 3-alpha-h 11.3 40 0.0029 22.4 1.2 17 11-27 145-161 (319)
5 d1lpva_ g.62.1.1 (A:) DM domai 11.3 10 0.00075 21.0 -1.6 15 15-29 17-32 (52)
6 d1s1pa_ c.1.7.1 (A:) Prostagla 9.1 67 0.0049 21.1 1.7 27 11-37 140-170 (315)
7 d1agga_ g.3.6.2 (A:) omega-Aga 8.1 52 0.0038 17.5 0.6 9 21-29 7-15 (48)
8 d1us0a_ c.1.7.1 (A:) Aldose re 7.9 79 0.0057 20.7 1.6 16 12-27 140-155 (314)
9 d8abpa_ c.93.1.1 (A:) L-arabin 7.4 89 0.0065 19.5 1.7 14 12-25 207-220 (305)
10 d1mi3a_ c.1.7.1 (A:) Xylose re 7.1 93 0.0067 20.3 1.7 18 10-27 144-161 (319)
No 1
>d1f35a_ b.94.1.1 (A:) Olfactory marker protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.38 E-value=12 Score=24.90 Aligned_cols=10 Identities=40% Similarity=0.803 Sum_probs=8.0
Q ss_pred hhhcceeeee
Q 042316 76 ESMRKVIYLS 85 (90)
Q Consensus 76 ESLR~VMyLS 85 (90)
...|||||+-
T Consensus 132 AkiRKVMYFl 141 (162)
T d1f35a_ 132 AKIRKVMYFL 141 (162)
T ss_dssp HHHCSEEEEE
T ss_pred HHHHhheeee
Confidence 4689999973
No 2
>d1q33a_ d.113.1.1 (A:) NUDT9 (mitochondrial ADP-ribose pyrophosphatase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.25 E-value=11 Score=26.40 Aligned_cols=8 Identities=50% Similarity=1.298 Sum_probs=6.0
Q ss_pred eeecccCC
Q 042316 83 YLSSWGPY 90 (90)
Q Consensus 83 yLSCWGPn 90 (90)
-|.+||||
T Consensus 103 ~l~~wGpN 110 (292)
T d1q33a_ 103 LLGRWGPN 110 (292)
T ss_dssp TCSSSEEE
T ss_pred ccCccCcc
Confidence 47788887
No 3
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=11.82 E-value=61 Score=20.00 Aligned_cols=18 Identities=39% Similarity=0.573 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhccc-cccc
Q 042316 10 VAASVAAVEVLKDQ-GFCR 27 (90)
Q Consensus 10 vAaSvgaVealKDQ-G~Cr 27 (90)
.|.+|...|+.||. |..+
T Consensus 57 ~alAVR~lE~vK~K~~~~k 75 (105)
T d1v54e_ 57 FASAVRILEVVKDKAGPHK 75 (105)
T ss_dssp HHHHHHHHHHHHHHTTTCT
T ss_pred HHHHHHHHHHHHHHhcCcH
Confidence 47889999999988 5444
No 4
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=11.34 E-value=40 Score=22.36 Aligned_cols=17 Identities=29% Similarity=0.452 Sum_probs=13.8
Q ss_pred HHHHHHHHHhccccccc
Q 042316 11 AASVAAVEVLKDQGFCR 27 (90)
Q Consensus 11 AaSvgaVealKDQG~Cr 27 (90)
...+.++|.|||+|++|
T Consensus 145 ~e~~~~l~~l~~~Gkir 161 (319)
T d1afsa_ 145 CDTWEAMEKCKDAGLAK 161 (319)
T ss_dssp HHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHcCCEE
Confidence 35788999999998776
No 5
>d1lpva_ g.62.1.1 (A:) DM domain of Doublesex (dsx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=11.27 E-value=10 Score=21.00 Aligned_cols=15 Identities=20% Similarity=0.569 Sum_probs=11.4
Q ss_pred HHHHHhccc-cccccc
Q 042316 15 AAVEVLKDQ-GFCRWN 29 (90)
Q Consensus 15 gaVealKDQ-G~Crwn 29 (90)
|.+..||++ .+|+|.
T Consensus 17 G~~~~lKgHKr~C~~~ 32 (52)
T d1lpva_ 17 GLKITLKGHKRYCKFR 32 (52)
T ss_dssp TCCCTTTTCGGGCTTT
T ss_pred CceeecCCcccccCCC
Confidence 344578999 899996
No 6
>d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.13 E-value=67 Score=21.11 Aligned_cols=27 Identities=26% Similarity=0.390 Sum_probs=18.3
Q ss_pred HHHHHHHHHhccccccc----cchhHHHHHH
Q 042316 11 AASVAAVEVLKDQGFCR----WNYPIRLIHQ 37 (90)
Q Consensus 11 AaSvgaVealKDQG~Cr----wn~alrSl~~ 37 (90)
..++.++|.||++|++| -|+....++.
T Consensus 140 ~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~ 170 (315)
T d1s1pa_ 140 CTTWEAMEKCKDAGLAKSIGVSNFNRRQLEM 170 (315)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHH
T ss_pred HHHHHHHHHHHHcCcccccCCCCCCHHHHHH
Confidence 35678899999999877 2444444443
No 7
>d1agga_ g.3.6.2 (A:) omega-Agatoxin IV, IVa, IVb {Funnel web spider (Agelenopsis aperta) [TaxId: 6908]}
Probab=8.14 E-value=52 Score=17.54 Aligned_cols=9 Identities=44% Similarity=1.235 Sum_probs=7.1
Q ss_pred ccccccccc
Q 042316 21 KDQGFCRWN 29 (90)
Q Consensus 21 KDQG~Crwn 29 (90)
||-|.|.|.
T Consensus 7 ~dyg~c~wg 15 (48)
T d1agga_ 7 EDYGKCTWG 15 (48)
T ss_dssp CSSCBCCSS
T ss_pred hhccccccC
Confidence 577889995
No 8
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.89 E-value=79 Score=20.66 Aligned_cols=16 Identities=38% Similarity=0.557 Sum_probs=13.1
Q ss_pred HHHHHHHHhccccccc
Q 042316 12 ASVAAVEVLKDQGFCR 27 (90)
Q Consensus 12 aSvgaVealKDQG~Cr 27 (90)
-.+.+.|.||++|+.|
T Consensus 140 e~~~~L~~lk~~G~Ir 155 (314)
T d1us0a_ 140 DTWAAMEELVDEGLVK 155 (314)
T ss_dssp HHHHHHHHHHHTTSBS
T ss_pred HHHHHHHHHHHcCCee
Confidence 4578899999998776
No 9
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=7.39 E-value=89 Score=19.55 Aligned_cols=14 Identities=29% Similarity=0.539 Sum_probs=11.3
Q ss_pred HHHHHHHHhccccc
Q 042316 12 ASVAAVEVLKDQGF 25 (90)
Q Consensus 12 aSvgaVealKDQG~ 25 (90)
+++|++++|+++|+
T Consensus 207 ~a~g~~~Al~~~G~ 220 (305)
T d8abpa_ 207 TVLGGVRATEGQGF 220 (305)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhc
Confidence 56899999988874
No 10
>d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]}
Probab=7.13 E-value=93 Score=20.33 Aligned_cols=18 Identities=22% Similarity=0.246 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhccccccc
Q 042316 10 VAASVAAVEVLKDQGFCR 27 (90)
Q Consensus 10 vAaSvgaVealKDQG~Cr 27 (90)
+...+.+++.||++|+.|
T Consensus 144 ~~e~~~~l~~l~~~Gkir 161 (319)
T d1mi3a_ 144 ILETWKALEKLVAAGKIK 161 (319)
T ss_dssp HHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHCCCEe
Done!