Your job contains 1 sequence.
>042321
MGKFGYLNYDNSNNQTHANDDDFDELLESAIKNYQLNYHLKSTEVLDAGTVGKMRTHDAE
LQILGSPRWPASKFSLTYAFLPGTRGDAINPVARAFQTWAPNTQFQFAESQDYRNADIKI
SFESGDHGAGALSTAVVESWLMLQLLLESQSVCMELIFKELGIFINYNI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042321
(169 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2020548 - symbol:MMP "matrix metalloproteinase... 133 7.6e-16 2
TAIR|locus:2032467 - symbol:AT1G24140 species:3702 "Arabi... 127 5.9e-15 2
TAIR|locus:2025891 - symbol:AT1G59970 species:3702 "Arabi... 146 1.2e-09 1
TAIR|locus:2130928 - symbol:AT4G16640 species:3702 "Arabi... 104 1.2e-07 2
TAIR|locus:2055605 - symbol:AT2G45040 species:3702 "Arabi... 114 2.5e-06 2
UNIPROTKB|F1MT97 - symbol:LOC100848085 "Uncharacterized p... 108 0.00056 1
UNIPROTKB|H3BV48 - symbol:MMP2 "PEX" species:9606 "Homo s... 87 0.00068 1
WB|WBGene00016283 - symbol:C31B8.8 species:6239 "Caenorha... 108 0.00076 1
>TAIR|locus:2020548 [details] [associations]
symbol:MMP "matrix metalloproteinase" species:3702
"Arabidopsis thaliana" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA;ISS] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031012 "extracellular matrix" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=TAS] InterPro:IPR001818
InterPro:IPR006026 InterPro:IPR021158 InterPro:IPR021190
InterPro:IPR024079 Pfam:PF00413 PRINTS:PR00138 PROSITE:PS00546
SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0031225 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 Gene3D:3.40.390.10 GO:GO:0031012
SUPFAM:SSF47090 EMBL:AC002062 eggNOG:NOG295915 HOGENOM:HOG000239471
HSSP:P33435 IPI:IPI00517582 PIR:E96724 RefSeq:NP_177174.1
UniGene:At.27821 ProteinModelPortal:O04529 SMR:O04529
MEROPS:M10.A01 EnsemblPlants:AT1G70170.1 GeneID:843353
KEGG:ath:AT1G70170 TAIR:At1g70170 InParanoid:O04529 OMA:RWSAATT
PhylomeDB:O04529 ProtClustDB:CLSN2719608 Genevestigator:O04529
Uniprot:O04529
Length = 378
Score = 133 (51.9 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 65 GSPRWPASKFSLTYAFLP-GTRGDAINPV-ARAFQTWAPNTQFQFAESQDYRNADIKISF 122
G PRWP ++ LTYAF P + + V +RAF W+ T F S+ + +DI I F
Sbjct: 160 GEPRWPRNRRDLTYAFDPKNPLTEEVKSVFSRAFGRWSDVTALNFTLSESFSTSDITIGF 219
Query: 123 ESGDHGAG 130
+GDHG G
Sbjct: 220 YTGDHGDG 227
Score = 93 (37.8 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 3 KFGYLNYDNSNNQTHANDDDFDELLESAIKNYQLNYHLKSTEVLDAGTV 51
+FGY+ S N T DDFD++L++A++ YQ N++L T LDA T+
Sbjct: 68 RFGYIPETFSGNFT----DDFDDILKAAVELYQTNFNLNVTGELDALTI 112
>TAIR|locus:2032467 [details] [associations]
symbol:AT1G24140 species:3702 "Arabidopsis thaliana"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA;ISS] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=TAS] [GO:0009693 "ethylene biosynthetic process"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR001818 InterPro:IPR006026
InterPro:IPR021158 InterPro:IPR021190 InterPro:IPR024079
Pfam:PF00413 PRINTS:PR00138 PROSITE:PS00546 SMART:SM00235
InterPro:IPR002477 Pfam:PF01471 EMBL:CP002684 GO:GO:0046872
GO:GO:0031225 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
Gene3D:3.40.390.10 GO:GO:0031012 SUPFAM:SSF47090
HOGENOM:HOG000239471 ProtClustDB:CLSN2719608 EMBL:BT015765
IPI:IPI00541697 RefSeq:NP_173824.2 UniGene:At.41476
ProteinModelPortal:Q5XF51 SMR:Q5XF51 STRING:Q5XF51 MEROPS:M10.A05
EnsemblPlants:AT1G24140.1 GeneID:839026 KEGG:ath:AT1G24140
TAIR:At1g24140 InParanoid:Q5XF51 OMA:EENWIVS PhylomeDB:Q5XF51
Genevestigator:Q5XF51 Uniprot:Q5XF51
Length = 384
Score = 127 (49.8 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 65 GSPRWPASKFSLTYAFLP-GTRGDAINPV-ARAFQTWAPNTQFQFAESQDYRNADIKISF 122
G PRWP ++ LTYAF P + + V +RAF W T F + + +DI I F
Sbjct: 164 GEPRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVTPLTFTRVERFSTSDISIGF 223
Query: 123 ESGDHGAG 130
SG+HG G
Sbjct: 224 YSGEHGDG 231
Score = 91 (37.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 4 FGYLNYDN-SNNQTHANDDDFDELLESAIKNYQLNYHLKSTEVLDAGTV 51
FGY+ N S N T DDFD++L++A++ YQ N+ L T VLD T+
Sbjct: 71 FGYITETNLSGNFT----DDFDDILKNAVEMYQRNFQLNVTGVLDELTL 115
>TAIR|locus:2025891 [details] [associations]
symbol:AT1G59970 species:3702 "Arabidopsis thaliana"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA;ISS] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR021158
InterPro:IPR021190 InterPro:IPR024079 Pfam:PF00413 PRINTS:PR00138
PROSITE:PS00546 SMART:SM00235 InterPro:IPR002477 Pfam:PF01471
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0046872
GO:GO:0031225 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
Gene3D:3.40.390.10 GO:GO:0031012 SUPFAM:SSF47090 EMBL:AC005966
Gene3D:1.10.101.10 eggNOG:NOG295915 HSSP:P03956
HOGENOM:HOG000239471 ProtClustDB:CLSN2719608 EMBL:BT025260
EMBL:AK176709 IPI:IPI00517048 RefSeq:NP_176205.1 UniGene:At.36745
ProteinModelPortal:Q9ZUJ5 SMR:Q9ZUJ5 MEROPS:M10.038
EnsemblPlants:AT1G59970.1 GeneID:842291 KEGG:ath:AT1G59970
TAIR:At1g59970 InParanoid:Q9ZUJ5 KO:K07761 OMA:CHIGENI
PhylomeDB:Q9ZUJ5 ArrayExpress:Q9ZUJ5 Genevestigator:Q9ZUJ5
Uniprot:Q9ZUJ5
Length = 360
Score = 146 (56.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/82 (43%), Positives = 42/82 (51%)
Query: 52 GK-MRTHDAELQILGSPRWPASKFSLTYAFLPGTR-GDAINPV-ARAFQTWAPNTQFQFA 108
GK +RT + G PRWP K LTYAF P D + V +RAF WA T F
Sbjct: 134 GKILRTTEKYSFFPGKPRWPKRKRDLTYAFAPQNNLTDEVKRVFSRAFTRWAEVTPLNFT 193
Query: 109 ESQDYRNADIKISFESGDHGAG 130
S+ ADI I F SG+HG G
Sbjct: 194 RSESILRADIVIGFFSGEHGDG 215
>TAIR|locus:2130928 [details] [associations]
symbol:AT4G16640 species:3702 "Arabidopsis thaliana"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA;ISS] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=TAS] InterPro:IPR001818 InterPro:IPR006026
InterPro:IPR021190 InterPro:IPR024079 Pfam:PF00413 PRINTS:PR00138
SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0031225 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 EMBL:Z97341 EMBL:AL161544
Gene3D:3.40.390.10 GO:GO:0031012 SUPFAM:SSF47090 eggNOG:NOG295915
HOGENOM:HOG000239471 IPI:IPI00537932 PIR:E71433 RefSeq:NP_193397.1
UniGene:At.33062 HSSP:P09237 ProteinModelPortal:O23507 SMR:O23507
MEROPS:M10.A04 PaxDb:O23507 PRIDE:O23507 EnsemblPlants:AT4G16640.1
GeneID:827365 KEGG:ath:AT4G16640 TAIR:At4g16640 InParanoid:O23507
OMA:HAFSPKN PhylomeDB:O23507 ProtClustDB:CLSN2916064
Genevestigator:O23507 Uniprot:O23507
Length = 364
Score = 104 (41.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/72 (36%), Positives = 34/72 (47%)
Query: 65 GSPRWPASKFSLTYAFLPG------TRGDAINPVARAFQTWAPNTQFQFAESQDYRNADI 118
G P+W ++ +LTYA T D RAF W+ F E D+ AD+
Sbjct: 155 GKPKW--NRDTLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDDFTTADL 212
Query: 119 KISFESGDHGAG 130
KI F +GDHG G
Sbjct: 213 KIGFYAGDHGDG 224
Score = 71 (30.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/52 (46%), Positives = 26/52 (50%)
Query: 3 KFGYLNYDNSNNQTHANDDDFDELLESAIKNYQLNYHLKSTEVLDAGTVGKM 54
+FGY+N D S D FD LESAI YQ N L T LD TV M
Sbjct: 79 RFGYVN-DGSE----IFSDVFDGPLESAISLYQENLGLPITGRLDTSTVTLM 125
>TAIR|locus:2055605 [details] [associations]
symbol:AT2G45040 species:3702 "Arabidopsis thaliana"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA;ISS] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=TAS] InterPro:IPR001818 InterPro:IPR006026
InterPro:IPR021190 InterPro:IPR024079 Pfam:PF00413 PRINTS:PR00138
SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 EMBL:CP002685
GO:GO:0046872 GO:GO:0031225 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 Gene3D:3.40.390.10 GO:GO:0031012 SUPFAM:SSF47090
UniGene:At.22630 HSSP:P03956 HOGENOM:HOG000239471 OMA:TEDYVIA
EMBL:BT008782 EMBL:AK118590 IPI:IPI00545703 PIR:G84885
RefSeq:NP_182030.1 ProteinModelPortal:Q8GWW6 SMR:Q8GWW6
IntAct:Q8GWW6 MEROPS:M10.A02 EnsemblPlants:AT2G45040.1
GeneID:819111 KEGG:ath:AT2G45040 TAIR:At2g45040 InParanoid:Q8GWW6
PhylomeDB:Q8GWW6 ProtClustDB:CLSN2913032 ArrayExpress:Q8GWW6
Genevestigator:Q8GWW6 Uniprot:Q8GWW6
Length = 342
Score = 114 (45.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 30/73 (41%), Positives = 34/73 (46%)
Query: 65 GSPRWPAS-KFSLTYAFLPGTRGDAINPV------ARAFQTWAPNTQFQFAESQDYRNAD 117
G PRW LTYAF + P RAF WA F E++DY AD
Sbjct: 130 GRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIETEDYVIAD 189
Query: 118 IKISFESGDHGAG 130
IKI F +GDHG G
Sbjct: 190 IKIGFFNGDHGDG 202
Score = 41 (19.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 19 NDDDFDELLESAIKNYQLNYHLKSTEVLDAGTVGKM 54
N + D E A+ YQ N L T D+ T+ ++
Sbjct: 66 NKESDDVSFEQALVRYQKNLGLPITGKPDSDTLSQI 101
>UNIPROTKB|F1MT97 [details] [associations]
symbol:LOC100848085 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR016293
InterPro:IPR021158 InterPro:IPR021190 InterPro:IPR024079
Pfam:PF00413 PIRSF:PIRSF001191 PRINTS:PR00138 PROSITE:PS00546
SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 GO:GO:0008270
GO:GO:0006508 GO:GO:0005509 GO:GO:0004222 Gene3D:3.40.390.10
GO:GO:0031012 Gene3D:2.110.10.10 InterPro:IPR000585
InterPro:IPR018487 Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923
SUPFAM:SSF47090 InterPro:IPR018486 PROSITE:PS00024
GeneTree:ENSGT00630000089491 KO:K01388 IPI:IPI00707864
UniGene:Bt.3417 OMA:ETQEQDV EMBL:DAAA02039868 RefSeq:XP_003586977.1
Ensembl:ENSBTAT00000021014 GeneID:100848085 KEGG:bta:100848085
Uniprot:F1MT97
Length = 469
Score = 108 (43.1 bits), Expect = 0.00056, P = 0.00056
Identities = 43/135 (31%), Positives = 61/135 (45%)
Query: 6 YL-NYDNSN-NQTHANDDDFDELLESAIKNYQLNYHLKSTEVLDAGTVGKMR-----THD 58
YL NY N N N L+ +K Q + L+ T DA T+ M+ D
Sbjct: 37 YLENYYNLNSNGKKVERQRNGGLITEKLKQMQKFFGLRVTGKPDAETLNVMKQPRCGVPD 96
Query: 59 AELQIL--GSPRWPASKFSLTYA---FLPG-TRGDAINPVARAFQTWAPNTQFQFAESQD 112
+L G+PRW + +LTY + P +R D + +AFQ W+ T F + +
Sbjct: 97 VAPFVLTPGNPRWENT--NLTYRIENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSE 154
Query: 113 YRNADIKISFESGDH 127
+ ADI ISF GDH
Sbjct: 155 GQ-ADIMISFVRGDH 168
>UNIPROTKB|H3BV48 [details] [associations]
symbol:MMP2 "PEX" species:9606 "Homo sapiens" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0001955 "blood vessel
maturation" evidence=IEA] [GO:0001957 "intramembranous
ossification" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0030017
"sarcomere" evidence=IEA] [GO:0030574 "collagen catabolic process"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0060346 "bone trabecula formation" evidence=IEA] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEA]
InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR021158
InterPro:IPR021190 InterPro:IPR024079 Pfam:PF00413 PRINTS:PR00138
PROSITE:PS00546 SMART:SM00235 InterPro:IPR002477 Pfam:PF01471
GO:GO:0005886 GO:GO:0046872 GO:GO:0030017 GO:GO:0008270
GO:GO:0001666 GO:GO:0006508 GO:GO:0004222 GO:GO:0001955
Gene3D:3.40.390.10 GO:GO:0030574 GO:GO:0031012 SUPFAM:SSF47090
GO:GO:0060325 GO:GO:0071230 GO:GO:0001957 GO:GO:0007566
GO:GO:0060346 EMBL:AC007336 EMBL:AC092722 HGNC:HGNC:7166
ChiTaRS:MMP2 Ensembl:ENST00000568715 Bgee:H3BV48 Uniprot:H3BV48
Length = 118
Score = 87 (35.7 bits), Expect = 0.00068, P = 0.00068
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 67 PRWPASKFSLTY---AFLPGTRGDAINPV-ARAFQTWAPNTQFQFAESQDYRNADIKISF 122
P+W K +TY + P + ++ ARAFQ W+ T +F+ D ADI I+F
Sbjct: 41 PKW--DKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHD-GEADIMINF 97
Query: 123 ESGDHGAG 130
+HG G
Sbjct: 98 GRWEHGDG 105
>WB|WBGene00016283 [details] [associations]
symbol:C31B8.8 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR001818
InterPro:IPR006026 InterPro:IPR016293 InterPro:IPR021190
InterPro:IPR024079 Pfam:PF00413 PIRSF:PIRSF001191 PRINTS:PR00138
SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 GO:GO:0008270
GO:GO:0006508 GO:GO:0005509 GO:GO:0004222 Gene3D:3.40.390.10
GO:GO:0031012 Gene3D:2.110.10.10 InterPro:IPR000585
InterPro:IPR018487 SMART:SM00120 SUPFAM:SSF50923 SUPFAM:SSF47090
GeneTree:ENSGT00570000079061 HSSP:P03956 EMBL:AB007815
EMBL:FO080737 PIR:T37248 RefSeq:NP_503790.1 UniGene:Cel.18034
ProteinModelPortal:G5EBU3 SMR:G5EBU3 MEROPS:M10.A07
EnsemblMetazoa:C31B8.8 GeneID:178748 KEGG:cel:CELE_C31B8.8
CTD:178748 WormBase:C31B8.8 OMA:FIKGSEY NextBio:902392
Uniprot:G5EBU3
Length = 579
Score = 108 (43.1 bits), Expect = 0.00076, P = 0.00076
Identities = 39/137 (28%), Positives = 62/137 (45%)
Query: 4 FGYLNYDNSNNQTHANDDDF---DELLESAIKNYQLNYHLKSTEVLDAGTVGKMRTH--- 57
FGY+ NS + D +++ +SAI+ +Q + T LDA T KM
Sbjct: 64 FGYVPPSNSLQSRNGMAGDIQSAEQVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCG 123
Query: 58 --DAELQIL-GSPRWPASKFSLTYAFLPGT----RGDAINPVARAFQTWAPNTQFQFAES 110
DA L + GS ++ SK LTY+ + + D ++ A+ W+ T +F+E
Sbjct: 124 VTDAPLALTSGSSQFKWSKTRLTYSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEV 183
Query: 111 QDYRNADIKISFESGDH 127
+DIKI F +H
Sbjct: 184 PAGSTSDIKIRFGVRNH 200
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 169 169 0.00082 108 3 11 22 0.40 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 592 (63 KB)
Total size of DFA: 157 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.98u 0.11s 17.09t Elapsed: 00:00:01
Total cpu time: 16.99u 0.11s 17.10t Elapsed: 00:00:01
Start: Fri May 10 03:10:44 2013 End: Fri May 10 03:10:45 2013