BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042325
(145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FUJ3|CKX2_ARATH Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2
Length = 501
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 99/148 (66%), Gaps = 14/148 (9%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TGKGE +TC+ Q + ELFY VLGGLGQF ITRARIVL A +R KW R+LYSDF++F
Sbjct: 184 VITGKGEMLTCSRQLNPELFYGVLGGLGQFGIITRARIVLDHAPKRAKWFRMLYSDFTTF 243
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPLD--FYPQSQHQKITSLINQYGIVYLIE 123
+ DQE LIS ++ + DYLEGQ+ +S +D F+P S K+ L+ Q+GI+Y++E
Sbjct: 244 TKDQERLISM---ANDIGVDYLEGQIFLSNGVVDTSFFPPSDQSKVADLVKQHGIIYVLE 300
Query: 124 VATYYDNKNE-------DKVSHQSSYIP 144
VA YYD+ N D ++ SY+P
Sbjct: 301 VAKYYDDPNLPIISKVIDTLTKTLSYLP 328
>sp|Q9FUJ2|CKX4_ARATH Cytokinin dehydrogenase 4 OS=Arabidopsis thaliana GN=CKX4 PE=1 SV=2
Length = 524
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 89/126 (70%), Gaps = 7/126 (5%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TGKGE +TC+ + + ELFY VLGGLGQF ITRARI L A RVKW RILYSDFS+F
Sbjct: 207 VITGKGEMMTCSPKLNPELFYGVLGGLGQFGIITRARIALDHAPTRVKWSRILYSDFSAF 266
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPLD--FYPQSQHQKITSLINQYGIVYLIE 123
DQE LIS T + + D+LEGQL+MS +D F+P S ++ SL+N + I+Y++E
Sbjct: 267 KRDQERLISMT---NDLGVDFLEGQLMMSNGFVDTSFFPLSDQTRVASLVNDHRIIYVLE 323
Query: 124 VATYYD 129
VA YYD
Sbjct: 324 VAKYYD 329
>sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1
Length = 523
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 88/139 (63%), Gaps = 12/139 (8%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TGKGE TC+ +++LF+AVLGGLGQF ITRARI L A +R KWLR LY DFS F
Sbjct: 201 VITGKGEIATCSKDMNSDLFFAVLGGLGQFGIITRARIKLEVAPKRAKWLRFLYIDFSEF 260
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPLD-----FYPQSQHQKITSLINQYGIVY 120
+ DQE +IS T D+LEG +++ P D +YP S H +I S++ ++ ++Y
Sbjct: 261 TRDQERVISKTDGV-----DFLEGSIMVDHGPPDNWRSTYYPPSDHLRIASMVKRHRVIY 315
Query: 121 LIEVATYYDNKNEDKVSHQ 139
+EV YYD ++ V+ +
Sbjct: 316 CLEVVKYYDETSQYTVNEE 334
>sp|Q6YW50|CKX7_ORYSJ Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7
PE=3 SV=1
Length = 524
Score = 106 bits (264), Expect = 5e-23, Method: Composition-based stats.
Identities = 56/132 (42%), Positives = 85/132 (64%), Gaps = 12/132 (9%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG G+ VTC+ KD++LF+AVLGGLGQF ITRARI L PA +RV+W+R+ YSD ++F
Sbjct: 191 VITGTGDMVTCSRDKDSDLFFAVLGGLGQFGIITRARIGLMPAPKRVRWVRLAYSDVATF 250
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPLD------FYPQSQHQKITSLINQ--YG 117
+ DQE LIS DY+EGQ+ ++++ + F+ S ++ L ++ G
Sbjct: 251 TKDQELLISKRASEAGF--DYVEGQVQLNRTLTEGPKSTPFFSSSDIGRLAGLASKSVSG 308
Query: 118 IVYLIEVATYYD 129
++Y+IE YY+
Sbjct: 309 VIYVIEGTMYYN 320
>sp|Q5Z620|CKX10_ORYSJ Cytokinin dehydrogenase 10 OS=Oryza sativa subsp. japonica GN=CKX10
PE=3 SV=1
Length = 550
Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/142 (42%), Positives = 83/142 (58%), Gaps = 12/142 (8%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG GE +TC+ + ++ LF+AVLGGLGQF ITRARI L PA +RVKW+RI YSD F
Sbjct: 203 VVTGMGEMITCSPEVNSALFFAVLGGLGQFGVITRARIRLEPAPKRVKWVRIAYSDVHPF 262
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQS------PLDFYPQSQHQKITSLINQYGIV 119
+TDQE LIS DY+EGQ+ ++++ F+ + ++T L G V
Sbjct: 263 TTDQELLISKWASGSGF--DYVEGQVQLNRTLTQGRRSSSFFSATDLARLTGLAIDTGSV 320
Query: 120 --YLIEVATYYDNKNEDKVSHQ 139
Y IE A YYD+ V +
Sbjct: 321 AIYYIEGAMYYDDNTAASVDQK 342
>sp|O22213|CKX1_ARATH Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1
Length = 575
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 92/152 (60%), Gaps = 21/152 (13%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
I TGKGE VTC+ ++++ELF++VLGGLGQF ITRARI L PA VKW+R+LYSDFS+F
Sbjct: 220 IVTGKGEVVTCSEKRNSELFFSVLGGLGQFGIITRARISLEPAPHMVKWIRVLYSDFSAF 279
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPL------DFYPQSQHQKITSLINQYGIV 119
S DQE LIS K DY+EG ++++++ L F P Q + + +
Sbjct: 280 SRDQEYLIS----KEKTF-DYVEGFVIINRTDLLNNWRSSFSPNDSTQA-SRFKSDGKTL 333
Query: 120 YLIEVATYYD-------NKNEDKVSHQSSYIP 144
Y +EV Y++ ++ K+ + +YIP
Sbjct: 334 YCLEVVKYFNPEEASSMDQETGKLLSELNYIP 365
>sp|Q6YW51|CKX6_ORYSJ Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6
PE=3 SV=1
Length = 527
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/142 (39%), Positives = 86/142 (60%), Gaps = 12/142 (8%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG+G+ VTC+ K+ +LF+AVLGGLGQF ITRARI L PA +RV+W+R+ YSD +F
Sbjct: 194 VITGRGDMVTCSRDKEPDLFFAVLGGLGQFGIITRARIGLEPAPKRVRWVRLAYSDVVTF 253
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPLD------FYPQSQHQKITSLINQ--YG 117
+ DQE LIS DY+EGQ+ ++++ + F+ + ++ L ++ G
Sbjct: 254 TRDQELLISKRASEAGF--DYVEGQVQLNRTLTEGPKSTPFFSRFDIDRLAGLASESVSG 311
Query: 118 IVYLIEVATYYDNKNEDKVSHQ 139
++Y IE A YY+ V +
Sbjct: 312 VIYFIEGAMYYNESTTASVDQK 333
>sp|Q67YU0|CKX5_ARATH Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1
Length = 540
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 87/139 (62%), Gaps = 10/139 (7%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TGKGE + C+ +++T LF+ VLGGLGQF ITRARI L PA +RV+W+R+LYS F F
Sbjct: 199 VVTGKGEVMRCSEEENTRLFHGVLGGLGQFGIITRARISLEPAPQRVRWIRVLYSSFKVF 258
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPLD-----FYPQSQHQKITSLINQYGIVY 120
+ DQE LIS G ++ DY+EG +++ + ++ F+ KI+S+ + ++Y
Sbjct: 259 TEDQEYLISMHG---QLKFDYVEGFVIVDEGLVNNWRSSFFSPRNPVKISSVSSNGSVLY 315
Query: 121 LIEVATYYDNKNEDKVSHQ 139
+E+ Y + + + V +
Sbjct: 316 CLEITKNYHDSDSEIVDQE 334
>sp|Q8LNV6|CKX3_ORYSJ Cytokinin dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CKX3
PE=2 SV=1
Length = 527
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 88/156 (56%), Gaps = 31/156 (19%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG+GE VTC+ KD ELF AVLGGLGQF ITRARI+L A ++VKW+R Y DF++F
Sbjct: 189 VVTGRGEIVTCSPTKDAELFNAVLGGLGQFGIITRARILLQEAPQKVKWVRAFYDDFATF 248
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPL-----------DFYPQSQHQKITSLIN 114
+ DQE L+S V+ DY+EG +++++ L DF P + N
Sbjct: 249 TKDQELLVSM-----PVLVDYVEGFIVLNEQSLHSSSIAFPTNVDFNPDFGTK------N 297
Query: 115 QYGIVYLIEVATY-YDNKN------EDKVSHQSSYI 143
I Y IE A + Y NKN + +S Q S+I
Sbjct: 298 NPKIYYCIEFAVHDYQNKNINVEQVVEVISRQMSHI 333
>sp|Q9LY71|CKX6_ARATH Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2
Length = 533
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 11/139 (7%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
I TGKGE + CT +++++LF VLGGLGQF ITRARI L PA VKW+R+LY DF++F
Sbjct: 206 IVTGKGEILNCTKRQNSDLFNGVLGGLGQFGIITRARIALEPAPTMVKWIRVLYLDFAAF 265
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSP-LDFYPQSQHQKITSLINQYGI----VY 120
+ DQE LIS G HK DY+EG ++++++ L+ + S + +Q+ +Y
Sbjct: 266 AKDQEQLISAQG--HKF--DYIEGFVIINRTGLLNSWRLSFTAEEPLEASQFKFDGRTLY 321
Query: 121 LIEVATYYDNKNEDKVSHQ 139
+E+A Y N+D ++ +
Sbjct: 322 CLELAKYLKQDNKDVINQE 340
>sp|Q5JLP4|CKX4_ORYSJ Cytokinin dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CKX4
PE=2 SV=1
Length = 529
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 85/135 (62%), Gaps = 14/135 (10%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
I TG+GE VTC+ + +++LFYA LGGLGQF ITRARI L PA + V+W+R+LYSDF +F
Sbjct: 202 IVTGRGEVVTCSHEVNSDLFYAALGGLGQFGIITRARIALEPAPKMVRWIRVLYSDFETF 261
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPL------DFYPQSQHQKITSLINQYGIV 119
+ DQE LI+ S K DY+EG ++++++ + F PQ Q + + ++
Sbjct: 262 TEDQEKLIA----SEKTF-DYIEGFVIINRTGILNNWRTSFKPQDPVQA-SQFQSDGRVL 315
Query: 120 YLIEVATYYDNKNED 134
Y +E+ +++ D
Sbjct: 316 YCLELTMNFNHDEAD 330
>sp|Q9T0N8|CKX1_MAIZE Cytokinin dehydrogenase 1 OS=Zea mays GN=CKX1 PE=1 SV=2
Length = 534
Score = 96.3 bits (238), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/137 (41%), Positives = 78/137 (56%), Gaps = 15/137 (10%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG GE VTC+ Q + +LF AVLGGLGQF ITRARI + PA R +W+R +Y+DF++F
Sbjct: 203 VITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAF 262
Query: 66 STDQETLISTT----GPSHKVMPDYLEGQLLMSQS------PLDFYPQSQHQKITSLINQ 115
S DQE L + G S M Y+EG + ++QS F+ + +I +L +
Sbjct: 263 SADQERLTAPRPGGGGASFGPM-SYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGE 321
Query: 116 YG--IVYLIEVATYYDN 130
VY IE YDN
Sbjct: 322 RNATTVYSIEATLNYDN 338
>sp|Q75K78|CKX9_ORYSJ Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CKX9
PE=2 SV=1
Length = 521
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 69/91 (75%), Gaps = 7/91 (7%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
I TG+G+ +TC+ +++++LF+A LGGLGQF ITRARI L PA + V+WLR+LY DF+SF
Sbjct: 195 IVTGRGDVITCSPEQNSDLFHAALGGLGQFGVITRARIPLEPAPKMVRWLRVLYLDFTSF 254
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQS 96
+ DQE LIS + K DY+EG ++++++
Sbjct: 255 TEDQEMLIS----AEKTF-DYIEGFVIINRT 280
>sp|Q9FUJ1|CKX7_ARATH Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1
Length = 524
Score = 89.4 bits (220), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 85/136 (62%), Gaps = 12/136 (8%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG G+ VTC+ +++ELF++VLGGLGQF ITRAR++L PA + V+W+R++Y++F F
Sbjct: 196 VVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEF 255
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQS-PLDFYP----QSQHQKITSLINQY--GI 118
+ D E L+S S DY+EG + ++ + P++ +P H+ + + Q +
Sbjct: 256 TQDAEWLVSQKNESSF---DYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSV 312
Query: 119 VYLIEVATYYDNKNED 134
+Y +E+ +Y + + +
Sbjct: 313 LYCLELGLHYRDSDSN 328
>sp|Q5ZAY9|CKX5_ORYSJ Cytokinin dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CKX5
PE=2 SV=1
Length = 534
Score = 89.0 bits (219), Expect = 8e-18, Method: Composition-based stats.
Identities = 54/130 (41%), Positives = 80/130 (61%), Gaps = 9/130 (6%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQ--FITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TGKGE VTC+ + +LF+ LGGLGQ ITRARI L PA RV+W+R LYS+F+ F
Sbjct: 201 VVTGKGEVVTCSESNNPDLFFGALGGLGQLGIITRARIALEPAPHRVRWIRALYSNFTEF 260
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMSQSPLD-----FYPQSQHQKITSLINQYGIVY 120
+ DQE LIS + DY+EG ++ ++ ++ F+ K++SL + G++Y
Sbjct: 261 TADQERLISLQHGGRRF--DYVEGFVVAAEGLINNWRSSFFSPQNPVKLSSLKHHSGVLY 318
Query: 121 LIEVATYYDN 130
+EV YD+
Sbjct: 319 CLEVTKNYDD 328
>sp|Q6Z955|CKX11_ORYSJ Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11
PE=2 SV=1
Length = 518
Score = 89.0 bits (219), Expect = 9e-18, Method: Composition-based stats.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG GE C+ D +LF+AVLGGLGQF ITRARI L PA + V+W R++Y+ F+ +
Sbjct: 176 VVTGDGECHVCSRSADPDLFFAVLGGLGQFGVITRARIPLSPAPQTVRWTRVVYASFADY 235
Query: 66 STDQETLISTTGPSHKVMPDYLEG-QLLMSQSPLDFY-----PQSQHQKITSLINQYG-I 118
+ D E L+ T P H+ DY+EG + S P++ + P H + L G +
Sbjct: 236 AADAEWLV--TRPPHEAF-DYVEGFAFVRSDDPVNGWPTVPIPDGAHFDASLLPANAGPV 292
Query: 119 VYLIEVATY 127
+Y +EVA Y
Sbjct: 293 LYCLEVALY 301
>sp|Q0JQ12|CKX1_ORYSJ Cytokinin dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CKX1
PE=2 SV=2
Length = 532
Score = 86.7 bits (213), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG GE VTC+ +++LF AVLGGLGQF ITRAR+ + PA R +W+R++Y+DF++F
Sbjct: 202 VITGHGETVTCSKAVNSDLFDAVLGGLGQFGVITRARVAVEPAPARARWVRLVYADFAAF 261
Query: 66 STDQETLISTTGPSHKVMPDYLEGQLLMS 94
S DQE L++ Y+EG + ++
Sbjct: 262 SADQERLVAARPDGSHGPWSYVEGAVYLA 290
>sp|A3AVP1|CKX8_ORYSJ Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. japonica GN=CKX8
PE=3 SV=1
Length = 532
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 13/96 (13%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TGKGE VTC+ + ELF+AVLGGLGQF ITRARI L A +V+W+R Y F +F
Sbjct: 196 VVTGKGEVVTCSPTEIPELFFAVLGGLGQFGIITRARIPLQLAPPKVRWVRAFYDSFETF 255
Query: 66 STDQETLISTTGPSHKVMP---DYLEGQLLMSQSPL 98
+ DQE L+S MP DY+EG +++++ L
Sbjct: 256 TGDQELLVS--------MPEQVDYVEGFMVLNEQSL 283
>sp|A2XVN3|CKX8_ORYSI Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. indica GN=CKX8
PE=3 SV=1
Length = 532
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 13/96 (13%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TGKGE VTC+ + ELF+AVLGGLGQF ITRARI L A +V+W+R Y F +F
Sbjct: 196 VVTGKGEVVTCSPTEIPELFFAVLGGLGQFGIITRARIPLQLAPPKVRWVRAFYDSFETF 255
Query: 66 STDQETLISTTGPSHKVMP---DYLEGQLLMSQSPL 98
+ DQE L+S MP DY+EG +++++ L
Sbjct: 256 TGDQELLVS--------MPEQVDYVEGFMVLNEQSL 283
>sp|Q4ADV8|CKX2_ORYSJ Cytokinin dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CKX2
PE=2 SV=1
Length = 565
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG GE VTC+ +K +LF AVLGGLGQF ITRARI L PA R +W+R +Y+ ++
Sbjct: 213 VITGVGEMVTCSKEKAPDLFDAVLGGLGQFGVITRARIPLAPAPARARWVRFVYTTAAAM 272
Query: 66 STDQETLIST----TGPSHKVMPDYLEGQLLMSQ 95
+ DQE LI+ + + DY+EG + ++Q
Sbjct: 273 TADQERLIAVDRAGGAGAVGGLMDYVEGSVHLNQ 306
>sp|P46377|FAS5_RHOFA Uncharacterized oxidoreductase ORF5 in fasciation locus
OS=Rhodococcus fascians GN=fas5 PE=2 SV=1
Length = 438
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65
+ TG G+F C++ ++ELF AV GGLGQF I A I L A E V+ ++ YS+ F
Sbjct: 151 VVTGSGDFRECSAVSNSELFDAVRGGLGQFGVIVNATIRLTAAHESVRQYKLQYSNLGVF 210
Query: 66 STDQ 69
DQ
Sbjct: 211 LGDQ 214
>sp|Q5BQE6|DHC24_RAT Delta(24)-sterol reductase OS=Rattus norvegicus GN=Dhcr24 PE=2 SV=2
Length = 516
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAV---LGGLGQFITRARIVLGPAKERVK 53
+ G FV CT ++++LFYAV G LG F+ A I + PAK+ VK
Sbjct: 192 LILADGSFVRCTPSENSDLFYAVPWSCGTLG-FLVAAEIRIIPAKKYVK 239
>sp|Q8VCH6|DHC24_MOUSE Delta(24)-sterol reductase OS=Mus musculus GN=Dhcr24 PE=2 SV=1
Length = 516
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAV---LGGLGQFITRARIVLGPAKERVK 53
+ G FV CT ++++LFYAV G LG F+ A I + PAK+ VK
Sbjct: 192 LILADGSFVRCTPSENSDLFYAVPWSCGTLG-FLVAAEIRIIPAKKYVK 239
>sp|Q60HC5|DHC24_MACFA Delta(24)-sterol reductase OS=Macaca fascicularis GN=DHCR24 PE=2
SV=2
Length = 516
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAV---LGGLGQFITRARIVLGPAKERVK 53
+ G FV CT ++++LFYAV G LG F+ A I + PAK+ VK
Sbjct: 192 LVLADGSFVRCTPSENSDLFYAVPWSCGTLG-FLVAAEIRIIPAKKYVK 239
>sp|Q15392|DHC24_HUMAN Delta(24)-sterol reductase OS=Homo sapiens GN=DHCR24 PE=1 SV=2
Length = 516
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 8 IFTGKGEFVTCTSQKDTELFYAV---LGGLGQFITRARIVLGPAKERVK 53
+ G FV CT ++++LFYAV G LG F+ A I + PAK+ VK
Sbjct: 192 LVLADGSFVRCTPSENSDLFYAVPWSCGTLG-FLVAAEIRIIPAKKYVK 239
>sp|Q6MG48|PRC2A_RAT Protein PRRC2A OS=Rattus norvegicus GN=Prrc2a PE=1 SV=1
Length = 2161
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 78 PSHKVMPDYLEGQLLMSQSPLDFYPQSQH 106
P ++P Y++ +LL + PLDFYP H
Sbjct: 722 PRWMMIPPYVDPRLLQGRPPLDFYPPGVH 750
>sp|Q7TSC1|PRC2A_MOUSE Protein PRRC2A OS=Mus musculus GN=Prrc2a PE=1 SV=1
Length = 2158
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 78 PSHKVMPDYLEGQLLMSQSPLDFYPQSQH 106
P ++P Y++ +LL + PLDFYP H
Sbjct: 721 PRWMMIPPYVDPRLLQGRPPLDFYPPGVH 749
>sp|Q5TM26|PRC2A_MACMU Protein PRRC2A OS=Macaca mulatta GN=PRRC2A PE=3 SV=1
Length = 2160
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 78 PSHKVMPDYLEGQLLMSQSPLDFYPQSQH 106
P ++P Y++ +LL + PLDFYP H
Sbjct: 721 PRWMMIPPYVDPRLLQGRPPLDFYPPGVH 749
>sp|P48634|PRC2A_HUMAN Protein PRRC2A OS=Homo sapiens GN=PRRC2A PE=1 SV=3
Length = 2157
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 78 PSHKVMPDYLEGQLLMSQSPLDFYPQSQH 106
P ++P Y++ +LL + PLDFYP H
Sbjct: 721 PRWMMIPPYVDPRLLQGRPPLDFYPPGVH 749
>sp|Q5HFJ8|PRIM_STAAC DNA primase OS=Staphylococcus aureus (strain COL) GN=dnaG PE=3 SV=1
Length = 599
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 53 KWLRILYSDFSSFSTD--QETLISTTGPSHKVMPDYLEGQLLMSQSPLDFYPQSQH 106
++L+ L D S + Q+ ++ P V P+ L ++ +Q+P ++YP+ ++
Sbjct: 388 RYLKELSHDISLMKSSILQQKALNDVAPFFNVSPEQLANEIQFNQAPANYYPEDEY 443
>sp|Q6GGD7|PRIM_STAAR DNA primase OS=Staphylococcus aureus (strain MRSA252) GN=dnaG PE=3
SV=1
Length = 599
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 53 KWLRILYSDFSSFSTD--QETLISTTGPSHKVMPDYLEGQLLMSQSPLDFYPQSQH 106
++L+ L D S + Q+ ++ P V P+ L ++ +Q+P ++YP+ ++
Sbjct: 388 RYLKELSHDISLMKSSILQQKALNDVAPFFNVSPEQLANEIQFNQAPANYYPEDEY 443
>sp|O83575|Y564_TREPA Uncharacterized protein TP_0564 OS=Treponema pallidum (strain
Nichols) GN=TP_0564 PE=4 SV=1
Length = 678
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 15/73 (20%)
Query: 48 AKER----VKWLRILYSDFSSFSTDQETLISTTGPSHKVMPDYLEGQLLMSQSPLDFYPQ 103
A+ER V+ LR+L DF + D L++ T H +PD++ P+D
Sbjct: 43 AQERETRAVQQLRLLVQDFEHQTPDVSVLVAITAHDHPPVPDFV---------PVDRLTG 93
Query: 104 SQHQKITSLINQY 116
+ +K+ SLI+ Y
Sbjct: 94 T--KKLISLISSY 104
>sp|O05338|PRIM_STAAU DNA primase OS=Staphylococcus aureus GN=dnaG PE=1 SV=2
Length = 605
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 53 KWLRILYSDFSSFSTD--QETLISTTGPSHKVMPDYLEGQLLMSQSPLDFYP 102
++L+ L D S + Q+ I+ P V P+ L ++ +Q+P ++YP
Sbjct: 388 RYLKELSHDISLMKSSILQQKAINDVAPFFNVSPEQLANEIQFNQAPANYYP 439
>sp|P63965|PRIM_STAAN DNA primase OS=Staphylococcus aureus (strain N315) GN=dnaG PE=3
SV=1
Length = 605
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 53 KWLRILYSDFSSFSTD--QETLISTTGPSHKVMPDYLEGQLLMSQSPLDFYP 102
++L+ L D S + Q+ I+ P V P+ L ++ +Q+P ++YP
Sbjct: 388 RYLKELSHDISLMKSSILQQKAINDVAPFFNVSPEQLANEIQFNQAPANYYP 439
>sp|P63964|PRIM_STAAM DNA primase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=dnaG PE=3 SV=1
Length = 605
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 53 KWLRILYSDFSSFSTD--QETLISTTGPSHKVMPDYLEGQLLMSQSPLDFYP 102
++L+ L D S + Q+ I+ P V P+ L ++ +Q+P ++YP
Sbjct: 388 RYLKELSHDISLMKSSILQQKAINDVAPFFNVSPEQLANEIQFNQAPANYYP 439
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,024,023
Number of Sequences: 539616
Number of extensions: 2025494
Number of successful extensions: 4368
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4309
Number of HSP's gapped (non-prelim): 42
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)