Query 042325
Match_columns 145
No_of_seqs 230 out of 1223
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 08:31:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042325.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042325hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2exr_A Cytokinin dehydrogenase 99.7 6.2E-16 2.1E-20 135.8 18.7 130 3-135 191-330 (524)
2 1w1o_A Cytokinin dehydrogenase 99.7 2.7E-16 9.3E-21 137.9 11.7 130 3-132 198-340 (534)
3 2bvf_A 6-hydroxy-D-nicotine ox 99.3 1.5E-11 5E-16 105.9 8.8 73 3-75 158-236 (459)
4 1zr6_A Glucooligosaccharide ox 99.2 1.7E-11 5.8E-16 107.0 8.9 72 3-74 164-241 (503)
5 4feh_A Oxidoreductase DPRE1; a 99.2 4.1E-11 1.4E-15 104.6 8.4 73 3-75 166-242 (481)
6 3rja_A Carbohydrate oxidase; p 99.1 1.2E-10 4E-15 101.2 8.3 72 3-74 160-238 (473)
7 3tsh_A Pollen allergen PHL P 4 99.0 3E-10 1E-14 98.7 7.4 60 3-63 178-240 (500)
8 3fw9_A Reticuline oxidase; BI- 99.0 4.2E-10 1.4E-14 98.5 6.3 70 3-73 169-245 (495)
9 3vte_A Tetrahydrocannabinolic 99.0 3.8E-10 1.3E-14 99.5 5.7 56 3-59 177-235 (518)
10 2vfr_A Xylitol oxidase, aldito 98.9 2.8E-09 9.6E-14 90.7 9.1 69 3-74 138-209 (422)
11 2yvs_A Glycolate oxidase subun 98.9 1.3E-09 4.3E-14 86.6 6.1 63 3-65 62-131 (219)
12 4bby_A Alkyldihydroxyacetoneph 98.8 1.4E-08 4.8E-13 91.3 9.2 72 4-75 334-411 (658)
13 3pop_A GILR oxidase; FAD bindi 98.8 8.5E-09 2.9E-13 90.3 6.9 43 3-45 156-208 (501)
14 3pm9_A Putative oxidoreductase 98.7 5.2E-08 1.8E-12 84.8 9.8 71 4-74 176-253 (476)
15 2y3s_A TAML; oxidoreductase; H 98.7 4E-08 1.4E-12 86.4 8.8 57 3-59 180-259 (530)
16 2uuu_A Alkyldihydroxyacetoneph 98.7 3.2E-08 1.1E-12 88.2 8.3 73 3-75 264-341 (584)
17 2ipi_A Aclacinomycin oxidoredu 98.6 9.7E-08 3.3E-12 83.7 8.7 57 3-59 177-255 (521)
18 1wvf_A 4-cresol dehydrogenase 98.6 1.1E-07 3.7E-12 83.1 8.7 65 3-67 181-259 (520)
19 2wdx_A Putative hexose oxidase 98.6 1.5E-07 5.2E-12 82.6 8.7 57 4-60 180-258 (523)
20 3js8_A Cholesterol oxidase; ch 98.5 2.1E-07 7E-12 82.7 8.7 80 3-93 168-260 (540)
21 2i0k_A Oxidoreductase; MIX alp 98.4 3.9E-07 1.3E-11 80.6 7.8 80 3-93 174-264 (561)
22 1f0x_A DLDH, D-lactate dehydro 98.2 1.9E-07 6.6E-12 83.1 0.7 72 3-74 190-298 (571)
23 1e8g_A Vanillyl-alcohol oxidas 98.2 4.8E-06 1.6E-10 73.4 8.8 86 3-90 197-315 (560)
24 3tx1_A UDP-N-acetylenolpyruvoy 97.3 0.00015 5.3E-09 60.2 4.3 44 4-50 170-217 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 97.0 0.00065 2.2E-08 57.3 4.8 45 3-50 147-199 (357)
26 2gqt_A UDP-N-acetylenolpyruvyl 96.8 0.00094 3.2E-08 54.2 3.8 43 3-49 128-173 (268)
27 1hsk_A UDP-N-acetylenolpyruvoy 96.7 0.0011 3.7E-08 54.8 3.9 42 4-48 164-209 (326)
28 1uxy_A MURB, uridine diphospho 96.7 0.0017 5.9E-08 54.2 5.0 45 3-50 131-183 (340)
29 1kcq_A Gelsolin, brevin, ADF, 56.0 9.5 0.00032 25.7 3.1 26 12-37 71-96 (104)
30 1svq_A Severin; actin-binding; 41.8 17 0.00057 25.0 2.6 23 13-35 81-105 (114)
No 1
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.71 E-value=6.2e-16 Score=135.84 Aligned_cols=130 Identities=35% Similarity=0.681 Sum_probs=105.3
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEecChhhHHHHHHHHHhccCCCC
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSFSTDQETLISTTGPSH 80 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~~~~~~~~d~~~li~~~~~~~ 80 (145)
-++++||++||++++|++.+|+||||+++||.|+| ||++|++|.|.|+..+|..+.|.+++++.+.+..+++.+.. .
T Consensus 191 V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~~~~~-~ 269 (524)
T 2exr_A 191 VTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVSQKNE-S 269 (524)
T ss_dssp EEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHTSCTT-S
T ss_pred EEEEEEEecCCeEEEECCCCChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHHcCCc-c
Confidence 36899999999999999999999999999999999 99999999999998888889999999999999998876532 1
Q ss_pred CCCCCeeEEEEeecC-CCCC-----CCCCcccccceeccc-CccEEEEEEEEeee-CCCChhh
Q 042325 81 KVMPDYLEGQLLMSQ-SPLD-----FYPQSQHQKITSLIN-QYGIVYLIEVATYY-DNKNEDK 135 (145)
Q Consensus 81 ~~~~dyveG~v~~~~-~~~~-----~~~~~~~~~~~~~~~-~~~~~Y~le~~~~y-~~~~~~~ 135 (145)
.++|+|++.+... ++.+ ++++.+...+..+.. .+.+++++|+++|| +..++++
T Consensus 270 --~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~llve~~~~~~~g~~~~~ 330 (524)
T 2exr_A 270 --SFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSNST 330 (524)
T ss_dssp --SCSEEEEEEEESSCCTTTSGGGSCSSTTSCCCGGGSCTTCCSEEEEEEEEEEECTTSCHHH
T ss_pred --hhHhhchhhhhcchhhhhhhhhcccccccccchhcCCcccccEEEEEEEEeecCCCCCHHH
Confidence 5799999988865 5544 344333333344432 46799999999999 6645543
No 2
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.67 E-value=2.7e-16 Score=137.88 Aligned_cols=130 Identities=42% Similarity=0.693 Sum_probs=97.8
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEecChhhHHHHHHHHHhccCC--
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSFSTDQETLISTTGP-- 78 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~~~~~~~~d~~~li~~~~~-- 78 (145)
-+++|||++||++++|++++|+|||||++||.|+| ||++|++|+|.++..+|..+.|.+++.+.+.++.+++.+..
T Consensus 198 v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (534)
T 1w1o_A 198 VLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTAPRPGGG 277 (534)
T ss_dssp EEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHCBC----
T ss_pred EEEEEEEeCCccEEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHHHHHHHHhcccccc
Confidence 36899999999999999999999999999999999 99999999999998888888999999999999888776421
Q ss_pred -CCCCCCCeeEEEEeecCCCCC------CCCCcccccceecccC--ccEEEEEEEEeeeCCCC
Q 042325 79 -SHKVMPDYLEGQLLMSQSPLD------FYPQSQHQKITSLINQ--YGIVYLIEVATYYDNKN 132 (145)
Q Consensus 79 -~~~~~~dyveG~v~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~Y~le~~~~y~~~~ 132 (145)
.....++|+++..+......+ ++++.+...+..+... +.+++++|++++|+..+
T Consensus 278 ~~~~~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ie~~~~~~g~~ 340 (534)
T 1w1o_A 278 GASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNAT 340 (534)
T ss_dssp --CBCSCSEEEEEEEEGGGHHHHHHTTSSSCHHHHHHHHHHHHHTTCSEEEEEEEEEEC----
T ss_pred cccccchhHhhhhhhcccccccccccccccCccccccccccccccccceEEEEEEEEecCCCc
Confidence 000158999999886421111 2333333333344433 67999999999996543
No 3
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=99.25 E-value=1.5e-11 Score=105.94 Aligned_cols=73 Identities=19% Similarity=0.279 Sum_probs=58.6
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEecC--hh--hHHHHHHHHHhc
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSD--FS--SFSTDQETLIST 75 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~~--~~--~~~~d~~~li~~ 75 (145)
-+++|||++||++++|++++|+|||||++||+|+| ||+++|+++|.|.......+.|.. .+ ++++....+...
T Consensus 158 v~~~~vV~~~G~i~~~~~~~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (459)
T 2bvf_A 158 ILGATLVTATGDVIYCSDDERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDALNE 236 (459)
T ss_dssp EEEEEEECTTSCEEEEESSSSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCeEEEeCCCCChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999 999999999996544434455543 44 566666666554
No 4
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.24 E-value=1.7e-11 Score=107.04 Aligned_cols=72 Identities=14% Similarity=0.200 Sum_probs=57.8
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEec----ChhhHHHHHHHHHh
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYS----DFSSFSTDQETLIS 74 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~----~~~~~~~d~~~li~ 74 (145)
-+++|||++||++++|++++|+|||||+|||+|+| ||+++++++|.+....+..+.+. ++.++++....+..
T Consensus 164 v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (503)
T 1zr6_A 164 LIGATVVLADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQ 241 (503)
T ss_dssp EEEEEEECTTSCEEEEBTTBSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCCEEEeCCCCCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 37899999999999999999999999999999999 99999999999886655554442 24445555555554
No 5
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.18 E-value=4.1e-11 Score=104.56 Aligned_cols=73 Identities=25% Similarity=0.264 Sum_probs=60.9
Q ss_pred eeeeEEEecCCcEEEecCC-CChhhHHHHhCCCCce--EEEEEEEeeccCCe-EEEEEEEecChhhHHHHHHHHHhc
Q 042325 3 WRAPFIFTGKGEFVTCTSQ-KDTELFYAVLGGLGQF--ITRARIVLGPAKER-VKWLRILYSDFSSFSTDQETLIST 75 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~-~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~-~~~~~~~y~~~~~~~~d~~~li~~ 75 (145)
-++++||++||++++|+++ +|+|||||++||+|++ ||++||++.|.++. .......+.+++++++..+++...
T Consensus 166 V~~~evV~~dG~v~~~s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 242 (481)
T 4feh_A 166 VRSMDLLTADGEIRHLTPTGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSDGSEA 242 (481)
T ss_dssp EEEEEEECTTSCEEEECSSSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSSSGGG
T ss_pred EeEEEEEeCCCCEEEeCCCCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHHHHhc
Confidence 3689999999999999999 9999999999999999 99999999998763 333345677888888877654443
No 6
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=99.12 E-value=1.2e-10 Score=101.20 Aligned_cols=72 Identities=13% Similarity=0.175 Sum_probs=57.2
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEecC-----hhhHHHHHHHHHh
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSD-----FSSFSTDQETLIS 74 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~~-----~~~~~~d~~~li~ 74 (145)
-+++|||++||++++|++++|+|||||+|||+|+| ||+++|+|+|.|..+.++.+.+.- ..+.++....+..
T Consensus 160 v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (473)
T 3rja_A 160 VVGVTVVLADGRIVEASATENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYAR 238 (473)
T ss_dssp EEEEEEECTTSCEEEEETTBSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHHH
T ss_pred eeeEEEEecCCeEEEeCCCCCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHhh
Confidence 37899999999999999999999999999999999 999999999998866555444321 3344555444444
No 7
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=99.04 E-value=3e-10 Score=98.70 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=48.3
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhCCC-Cce--EEEEEEEeeccCCeEEEEEEEecChh
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLGGL-GQF--ITRARIVLGPAKERVKWLRILYSDFS 63 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~GGl-G~f--IT~ati~l~Pa~~~~~~~~~~y~~~~ 63 (145)
-+++||||+||+++ +++++|+|||||++||. |+| ||++|+|++|.|+.+......+...+
T Consensus 178 v~~~~vV~a~G~i~-~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~ 240 (500)
T 3tsh_A 178 VIDVKLVDANGKLH-DKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSE 240 (500)
T ss_dssp EEEEEEECTTSCEE-CHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTT
T ss_pred eeeEEEECCCceEE-ECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHH
Confidence 47899999999987 45578999999999765 578 99999999999987655555554433
No 8
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=98.99 E-value=4.2e-10 Score=98.54 Aligned_cols=70 Identities=20% Similarity=0.343 Sum_probs=54.0
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhC-CCCce--EEEEEEEeeccCCeEEEEEEEec----ChhhHHHHHHHHH
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLG-GLGQF--ITRARIVLGPAKERVKWLRILYS----DFSSFSTDQETLI 73 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~G-GlG~f--IT~ati~l~Pa~~~~~~~~~~y~----~~~~~~~d~~~li 73 (145)
-++++||++||++++ ++.+|+|||||+|| |+|+| ||+++|+|+|.|+.+..+.+.+. +..+.+.....+.
T Consensus 169 v~~~~vV~adG~i~~-~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~~ 245 (495)
T 3fw9_A 169 VVDAILIDANGAILD-RQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVA 245 (495)
T ss_dssp EEEEEEECTTCCEEC-HHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCEEE-cCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHHH
Confidence 368999999999997 56679999999999 67899 99999999999987666555542 2334444444444
No 9
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=98.98 E-value=3.8e-10 Score=99.51 Aligned_cols=56 Identities=18% Similarity=0.277 Sum_probs=47.2
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhCC-CCce--EEEEEEEeeccCCeEEEEEEEe
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLGG-LGQF--ITRARIVLGPAKERVKWLRILY 59 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~GG-lG~f--IT~ati~l~Pa~~~~~~~~~~y 59 (145)
-++++||++||+++++ +.+|+|||||+||| +|+| ||+++|+|+|.|+.+..+.+.+
T Consensus 177 V~~~evV~adG~iv~~-~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~ 235 (518)
T 3vte_A 177 IIDAHLVNVDGKVLDR-KSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKK 235 (518)
T ss_dssp EEEEEEECTTCCEECH-HHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEE
T ss_pred EEEEEEEccCCeEEEe-eccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEe
Confidence 3789999999999965 45689999999997 8899 9999999999998665544444
No 10
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=98.93 E-value=2.8e-09 Score=90.66 Aligned_cols=69 Identities=20% Similarity=0.274 Sum_probs=59.2
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEecChhhHH-HHHHHHHh
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSFS-TDQETLIS 74 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~~~~~~~-~d~~~li~ 74 (145)
-++++||++||++++|++++|+ ||+++||+|++ ||++||++.|.++..... +.+.++++.+ +....+..
T Consensus 138 v~~~~vv~~~G~~~~~~~~~~~--f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 209 (422)
T 2vfr_A 138 VREVELVTADGSTVVIARGDER--FGGAVTSLGALGVVTSLTLDLEPAYEMEQHV-FTELPLAGLDPATFETVMA 209 (422)
T ss_dssp EEEEEEECTTSCEEEEETTSTT--GGGTSSCTTTTCEEEEEEEECEECCEEEEEE-EEEECSTTCCHHHHHHHHT
T ss_pred eEEEEEEeCCCCEEEeCCCCCC--cceEEecCCCCEEEEEEEEEEEecCceEEEE-EecCCHHHHHHHHHHHHHh
Confidence 3689999999999999999998 99999999998 999999999998854433 3377999998 88887763
No 11
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=98.92 E-value=1.3e-09 Score=86.61 Aligned_cols=63 Identities=17% Similarity=0.212 Sum_probs=51.8
Q ss_pred eeeeEEEecCCcEEEecCC-----CChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEecChhhH
Q 042325 3 WRAPFIFTGKGEFVTCTSQ-----KDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSF 65 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~-----~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~~~~~~ 65 (145)
-++++||++||++++|+++ .++||||+.+|+.|+| ||+++|+++|.++......+.+.+++.+
T Consensus 62 V~~vevV~~dG~i~~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~~~~~~~~~l 131 (219)
T 2yvs_A 62 VLGLTFRTPKGRRVRAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGSFPRL 131 (219)
T ss_dssp EEEEEEECTTSCEEEEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEEECCSSCCCC
T ss_pred EEEEEEEeCCCCEEEECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEEEecCCHHHH
Confidence 3689999999999999975 3479999999999998 9999999999998765555556555443
No 12
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=98.80 E-value=1.4e-08 Score=91.27 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=63.1
Q ss_pred eeeEEEecCCcEEEecCC----CChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEecChhhHHHHHHHHHhc
Q 042325 4 RAPFIFTGKGEFVTCTSQ----KDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSFSTDQETLIST 75 (145)
Q Consensus 4 ~~~evVtgdGevv~cS~~----~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~~~~~~~~d~~~li~~ 75 (145)
+++||||+||+++++++. ..+||||.++|+.|+| ||++||+|+|.|+......+.|.++++..+....++..
T Consensus 334 lgleVVlpdG~i~~~~~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~~~ 411 (658)
T 4bby_A 334 VHMKVVTPRGVIEKSCQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIAKQ 411 (658)
T ss_dssp EEEEEEETTEEEECSCCCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred eeEEEEeCCCcccccccccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHHHc
Confidence 689999999999988753 2369999999999999 99999999999998777778899999988888877765
No 13
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=98.78 E-value=8.5e-09 Score=90.32 Aligned_cols=43 Identities=28% Similarity=0.319 Sum_probs=38.4
Q ss_pred eeeeEEEe--cCCc--EEEe---cCCCChhhHHHHhCC-CCce--EEEEEEEe
Q 042325 3 WRAPFIFT--GKGE--FVTC---TSQKDTELFYAVLGG-LGQF--ITRARIVL 45 (145)
Q Consensus 3 ~~~~evVt--gdGe--vv~c---S~~~n~DLF~A~~GG-lG~f--IT~ati~l 45 (145)
-+++|||+ +||+ +++| ++++|+|||||+||| +|+| ||+++||+
T Consensus 156 v~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~ 208 (501)
T 3pop_A 156 LHAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRS 208 (501)
T ss_dssp EEEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred EEEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEe
Confidence 36899999 8999 7888 457899999999998 7999 99999998
No 14
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=98.71 E-value=5.2e-08 Score=84.79 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=61.2
Q ss_pred eeeEEEecCCcEEEecCC-----CChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEecChhhHHHHHHHHHh
Q 042325 4 RAPFIFTGKGEFVTCTSQ-----KDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSFSTDQETLIS 74 (145)
Q Consensus 4 ~~~evVtgdGevv~cS~~-----~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~~~~~~~~d~~~li~ 74 (145)
++++||++||+++++++. .+.||||+++|+.|+| ||++|++|.|.|+......+.|.++++..+....+.+
T Consensus 176 ~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 176 LGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp EEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred eEEEEEccCCeEEEcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 689999999999998653 3569999999999998 9999999999998766666788999988888777764
No 15
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=98.70 E-value=4e-08 Score=86.40 Aligned_cols=57 Identities=25% Similarity=0.367 Sum_probs=43.6
Q ss_pred eeeeEEEe--cCCcE--EEecCC-CChh--hHHHHhCC-CCce--EEEEEEEe------------eccCC-eEEEEEEEe
Q 042325 3 WRAPFIFT--GKGEF--VTCTSQ-KDTE--LFYAVLGG-LGQF--ITRARIVL------------GPAKE-RVKWLRILY 59 (145)
Q Consensus 3 ~~~~evVt--gdGev--v~cS~~-~n~D--LF~A~~GG-lG~f--IT~ati~l------------~Pa~~-~~~~~~~~y 59 (145)
-+++|||+ ++|++ ++|+++ +|+| ||||+||| +|+| ||+++|++ .|.++ .+....+.|
T Consensus 180 v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~ 259 (530)
T 2y3s_A 180 LHAVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVW 259 (530)
T ss_dssp EEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEE
T ss_pred eeeEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEe
Confidence 36899999 56997 567876 6654 99999986 6899 99999999 88775 333444555
No 16
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=98.70 E-value=3.2e-08 Score=88.17 Aligned_cols=73 Identities=18% Similarity=0.216 Sum_probs=59.9
Q ss_pred eeeeEEEecCCcEEE---ecCCCChhhHHHHhCCCCce--EEEEEEEeeccCCeEEEEEEEecChhhHHHHHHHHHhc
Q 042325 3 WRAPFIFTGKGEFVT---CTSQKDTELFYAVLGGLGQF--ITRARIVLGPAKERVKWLRILYSDFSSFSTDQETLIST 75 (145)
Q Consensus 3 ~~~~evVtgdGevv~---cS~~~n~DLF~A~~GGlG~f--IT~ati~l~Pa~~~~~~~~~~y~~~~~~~~d~~~li~~ 75 (145)
-+++|||++||++++ ...+.++||||+++|+.|+| ||+++++|.|.|+......+.|.++++..+....+...
T Consensus 264 V~~levVl~dG~i~~~~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~ 341 (584)
T 2uuu_A 264 AVSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSS 341 (584)
T ss_dssp EEEEEEEETTEEECCC-------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred eeeEEEEeCCCCEEECCccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHHhc
Confidence 368999999999887 24457899999999999998 99999999999987666677889999888888877764
No 17
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=98.62 E-value=9.7e-08 Score=83.68 Aligned_cols=57 Identities=26% Similarity=0.303 Sum_probs=43.6
Q ss_pred eeeeEEEecC--CcE--EEecCC-CChh--hHHHHhCC-CCce--EEEEEEEe-----------eccCC-eEEEEEEEe
Q 042325 3 WRAPFIFTGK--GEF--VTCTSQ-KDTE--LFYAVLGG-LGQF--ITRARIVL-----------GPAKE-RVKWLRILY 59 (145)
Q Consensus 3 ~~~~evVtgd--Gev--v~cS~~-~n~D--LF~A~~GG-lG~f--IT~ati~l-----------~Pa~~-~~~~~~~~y 59 (145)
-+++|||++| |++ ++|+++ +|+| ||||+||| +|+| ||+++|++ .|.++ .+.+..+.|
T Consensus 177 v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~ 255 (521)
T 2ipi_A 177 LYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTW 255 (521)
T ss_dssp EEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEE
T ss_pred EEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEe
Confidence 3689999966 986 667765 5654 99999986 6899 99999999 88775 333444555
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=98.61 E-value=1.1e-07 Score=83.05 Aligned_cols=65 Identities=12% Similarity=0.158 Sum_probs=54.1
Q ss_pred eeeeEEEecCCcEEEecC--CCChhhHHHHhCCCC----------ce--EEEEEEEeeccCCeEEEEEEEecChhhHHH
Q 042325 3 WRAPFIFTGKGEFVTCTS--QKDTELFYAVLGGLG----------QF--ITRARIVLGPAKERVKWLRILYSDFSSFST 67 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~--~~n~DLF~A~~GGlG----------~f--IT~ati~l~Pa~~~~~~~~~~y~~~~~~~~ 67 (145)
-+++|||++||++++++. .+|+|||++.+||.| +| ||+++++|.|.|+......+.|.++++..+
T Consensus 181 v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~ 259 (520)
T 1wvf_A 181 QCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVE 259 (520)
T ss_dssp EEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHH
T ss_pred EeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHH
Confidence 368999999999999975 478999888778765 67 999999999999876656678888877655
No 19
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=98.57 E-value=1.5e-07 Score=82.56 Aligned_cols=57 Identities=21% Similarity=0.355 Sum_probs=43.5
Q ss_pred eeeEEEe--cCCcE--EEecCC-CChh--hHHHHhCC-CCce--EEEEEEEe-----------eccCCe-EEEEEEEec
Q 042325 4 RAPFIFT--GKGEF--VTCTSQ-KDTE--LFYAVLGG-LGQF--ITRARIVL-----------GPAKER-VKWLRILYS 60 (145)
Q Consensus 4 ~~~evVt--gdGev--v~cS~~-~n~D--LF~A~~GG-lG~f--IT~ati~l-----------~Pa~~~-~~~~~~~y~ 60 (145)
+++|||+ ++|++ ++|++. +|+| ||||+||| +|+| ||+++|++ +|.++. +....+.|.
T Consensus 180 ~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (523)
T 2wdx_A 180 YAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFD 258 (523)
T ss_dssp EEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECC
T ss_pred EEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEec
Confidence 6899999 55996 456875 6666 99999975 6889 99999999 888763 444455553
No 20
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=98.54 E-value=2.1e-07 Score=82.72 Aligned_cols=80 Identities=9% Similarity=0.085 Sum_probs=60.4
Q ss_pred eeeeEEEecCCc-----EEEecCCCChhhHHHHhCCCCce-EEEEEEEeeccCCeEEEEEEEecChhhHHH-------HH
Q 042325 3 WRAPFIFTGKGE-----FVTCTSQKDTELFYAVLGGLGQF-ITRARIVLGPAKERVKWLRILYSDFSSFST-------DQ 69 (145)
Q Consensus 3 ~~~~evVtgdGe-----vv~cS~~~n~DLF~A~~GGlG~f-IT~ati~l~Pa~~~~~~~~~~y~~~~~~~~-------d~ 69 (145)
-++++||++||+ +++|++ +|+|| +|+++|+|.. ||++||+++|.+..... .....+++++++ .+
T Consensus 168 V~~levV~adG~~~~~~i~~~s~-~~~DL-~a~r~G~G~gIVTevtlrl~P~~~l~~~-~~~~~~~~e~l~~~~~~~~~~ 244 (540)
T 3js8_A 168 VLSLTAVVYDKASGAYALRKFAR-NDPQI-APLLAHVGRSLIVEATLQAAPNQRLRCQ-SWFNIPYGEMFAAAGSGGRTF 244 (540)
T ss_dssp EEEEEEEEEETTTTEEEEEEEET-TSGGG-HHHHTCTTSSCEEEEEEEEEECCEEEEE-EECCSCHHHHTCCSSCCSSCH
T ss_pred EEEEEEEcCCCCCceeeEEEeCC-CChhH-HHHHhcCCCeEEEEEEEEEEECCceEEE-EEecCCHHHHHhhcccccccH
Confidence 478999999999 999997 68998 5667777878 99999999999975422 111247888886 68
Q ss_pred HHHHhccCCCCCCCCCeeEEEEee
Q 042325 70 ETLISTTGPSHKVMPDYLEGQLLM 93 (145)
Q Consensus 70 ~~li~~~~~~~~~~~dyveG~v~~ 93 (145)
+.+++.+ +|+|=+.++
T Consensus 245 ~~~~~~~--------~~~e~~WfP 260 (540)
T 3js8_A 245 ASYLDSA--------GRVEAIWFP 260 (540)
T ss_dssp HHHHHHT--------SEEEEEECT
T ss_pred HHHHhcc--------CeEEEEEEC
Confidence 8888765 455555555
No 21
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=98.44 E-value=3.9e-07 Score=80.57 Aligned_cols=80 Identities=14% Similarity=0.103 Sum_probs=56.5
Q ss_pred eeeeEEEecCCc---EEEecCCCChhhHHHHhCCCCc-eEEEEEEEeeccCCeEEEEEEEecChhhHHHH-------HHH
Q 042325 3 WRAPFIFTGKGE---FVTCTSQKDTELFYAVLGGLGQ-FITRARIVLGPAKERVKWLRILYSDFSSFSTD-------QET 71 (145)
Q Consensus 3 ~~~~evVtgdGe---vv~cS~~~n~DLF~A~~GGlG~-fIT~ati~l~Pa~~~~~~~~~~y~~~~~~~~d-------~~~ 71 (145)
-++++||++||+ +++|+++ |+|||||.+| +|. .||++||+++|.++..... ....+++++++. ...
T Consensus 174 V~~~evV~~dG~~~~~~~~~~~-~~dl~~a~~g-~G~giIt~~tl~l~p~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~ 250 (561)
T 2i0k_A 174 VTELTAVVWNGTTYALETYQRN-DPRITPLLTN-LGRCFLTSVTMQAGPNFRQRCQS-YTDIPWRELFAPKGADGRTFEK 250 (561)
T ss_dssp EEEEEEEEECSSSEEEEEEETT-SGGGHHHHSC-TTSSCEEEEEEECEECCEEEEEE-ECCSCHHHHTCCTTCSSSCHHH
T ss_pred EEEEEEEeCCCCEEEeeeccCC-CccHHHHHhc-CCCEEEEEEEEEEEECCceEEEE-EEccCHHHHHHHHhcccccHHH
Confidence 368999999999 9999987 8999998884 343 5999999999998754332 222356666654 444
Q ss_pred HHhccCCCCCCCCCeeEEEEee
Q 042325 72 LISTTGPSHKVMPDYLEGQLLM 93 (145)
Q Consensus 72 li~~~~~~~~~~~dyveG~v~~ 93 (145)
+.+. .+|+|...++
T Consensus 251 ~~~~--------~~~~e~~~~p 264 (561)
T 2i0k_A 251 FVAE--------SGGAEAIWYP 264 (561)
T ss_dssp HHHH--------HSEEEEEECT
T ss_pred HHhc--------CCceEEEEcc
Confidence 4433 2567765555
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=98.22 E-value=1.9e-07 Score=83.13 Aligned_cols=72 Identities=8% Similarity=0.003 Sum_probs=59.8
Q ss_pred eeeeEEEecCCcEEEecCC---------------CCh-------------------hhHHHH--hCCCCce-EEEEEEEe
Q 042325 3 WRAPFIFTGKGEFVTCTSQ---------------KDT-------------------ELFYAV--LGGLGQF-ITRARIVL 45 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~---------------~n~-------------------DLF~A~--~GGlG~f-IT~ati~l 45 (145)
-++++||++||+++++++. +|+ ||+|+. +||.|+| ||++|+++
T Consensus 190 vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~GseGtlGVt~~tl~l 269 (571)
T 1f0x_A 190 HLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDT 269 (571)
T ss_dssp CSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCTTSSEEEEEEEEC
T ss_pred eeeEEEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCCCceeEEEEEEEE
Confidence 3578999999999998742 343 887777 9999999 99999999
Q ss_pred eccCCeEEEEEEEecChhhHHHHHHHHHh
Q 042325 46 GPAKERVKWLRILYSDFSSFSTDQETLIS 74 (145)
Q Consensus 46 ~Pa~~~~~~~~~~y~~~~~~~~d~~~li~ 74 (145)
+|.|+......+.+.++++..+....+.+
T Consensus 270 ~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 298 (571)
T 1f0x_A 270 FEAEKNQQVFYIGTNQPEVLTEIRRHILA 298 (571)
T ss_dssp EECCSSCEEEEEEESCHHHHHHHHHHHHH
T ss_pred EecCCeEEEEEEEeCCHHHHHHHHHHHHH
Confidence 99998766666788899998888888774
No 23
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=98.19 E-value=4.8e-06 Score=73.43 Aligned_cols=86 Identities=13% Similarity=0.116 Sum_probs=59.7
Q ss_pred eeeeEEEecCCcEEEecCC--CCh---------------hhHHHHhC-CC----------Cce--EEEEEEEeeccCCeE
Q 042325 3 WRAPFIFTGKGEFVTCTSQ--KDT---------------ELFYAVLG-GL----------GQF--ITRARIVLGPAKERV 52 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~--~n~---------------DLF~A~~G-Gl----------G~f--IT~ati~l~Pa~~~~ 52 (145)
-++++||++||++++++.. .|+ +++|++++ |. |+| ||++|++|.|.|...
T Consensus 197 v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~ 276 (560)
T 1e8g_A 197 HSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGY 276 (560)
T ss_dssp EEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCE
T ss_pred eeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCce
Confidence 3789999999999999863 331 56666654 32 677 999999999999877
Q ss_pred EEEEEEecChhhHHHHHH---HHHhccCCCCCCCCCeeEEE
Q 042325 53 KWLRILYSDFSSFSTDQE---TLISTTGPSHKVMPDYLEGQ 90 (145)
Q Consensus 53 ~~~~~~y~~~~~~~~d~~---~li~~~~~~~~~~~dyveG~ 90 (145)
....+.|.++++..+... .++...-.-. .+.+++..
T Consensus 277 ~~~~~~f~~~~~a~~~~~~~~~~~~~~~~p~--~~el~d~~ 315 (560)
T 1e8g_A 277 QSYLITLPKDGDLKQAVDIIRPLRLGMALQN--VPTIRHIL 315 (560)
T ss_dssp EEEEEEECSTTHHHHHHHHHHHHHHTTSSCS--CCEEEEHH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHHcCCCcc--eeEEechH
Confidence 667788988888655443 3443321111 46676665
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=97.34 E-value=0.00015 Score=60.20 Aligned_cols=44 Identities=20% Similarity=0.158 Sum_probs=35.3
Q ss_pred eeeEEEecCCcEEEecCCCChhhHHHHhCCC-Cc-e--EEEEEEEeeccCC
Q 042325 4 RAPFIFTGKGEFVTCTSQKDTELFYAVLGGL-GQ-F--ITRARIVLGPAKE 50 (145)
Q Consensus 4 ~~~evVtgdGevv~cS~~~n~DLF~A~~GGl-G~-f--IT~ati~l~Pa~~ 50 (145)
.+++||++||+++++++ +|++|+.|++. |. + ||+++++|.|.++
T Consensus 170 ~~vevV~~~G~i~~~~~---~~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 170 EAATVLTQTGELKKLKR---SELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp EEEEEECTTSCEEEEEG---GGCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred EEEEEEcCCCCEEEech---HHcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 68999999999999985 78999999873 42 3 9999999999874
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=96.99 E-value=0.00065 Score=57.33 Aligned_cols=45 Identities=13% Similarity=-0.009 Sum_probs=38.4
Q ss_pred eeeeEEEec-CCcEEEecCCCChhhHHHHhCCCC-----ce--EEEEEEEeeccCC
Q 042325 3 WRAPFIFTG-KGEFVTCTSQKDTELFYAVLGGLG-----QF--ITRARIVLGPAKE 50 (145)
Q Consensus 3 ~~~~evVtg-dGevv~cS~~~n~DLF~A~~GGlG-----~f--IT~ati~l~Pa~~ 50 (145)
-+++++|++ +|+++++++ .|++|+.|++.. .+ ||+++++|.|.+.
T Consensus 147 v~~vevv~~~~G~i~~~~~---~dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 147 CDYVEYLCLETGTVKRLTM---EECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp EEEEEEEETTTTEEEEEET---GGGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred EeEEEEEECCCCcEEEEeH---HHcCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 368999999 999999985 689999998742 45 9999999999864
No 26
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=96.76 E-value=0.00094 Score=54.21 Aligned_cols=43 Identities=23% Similarity=0.253 Sum_probs=36.7
Q ss_pred eeeeEEEecCCcEEEecCCCChhhHHHHhCCCCc---eEEEEEEEeeccC
Q 042325 3 WRAPFIFTGKGEFVTCTSQKDTELFYAVLGGLGQ---FITRARIVLGPAK 49 (145)
Q Consensus 3 ~~~~evVtgdGevv~cS~~~n~DLF~A~~GGlG~---fIT~ati~l~Pa~ 49 (145)
-.++++| +||+++++++ .|++|+.|++.-+ .||+++++|.|.+
T Consensus 128 v~~v~vv-~~G~v~~~~~---~~l~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 128 LEAVEVF-HDGAFHVYCP---EELGFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp EEEEEEE-ETTEEEEECG---GGSCCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred eeEEEEE-CCCcEEEEch---HHcccccCCCCcCCCceEEEEEEEEEeCC
Confidence 3689999 9999999985 6899999987521 5999999999974
No 27
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=96.72 E-value=0.0011 Score=54.85 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=35.0
Q ss_pred eeeEEEecCCcEEEecCCCChhhHHHHhCC----CCceEEEEEEEeecc
Q 042325 4 RAPFIFTGKGEFVTCTSQKDTELFYAVLGG----LGQFITRARIVLGPA 48 (145)
Q Consensus 4 ~~~evVtgdGevv~cS~~~n~DLF~A~~GG----lG~fIT~ati~l~Pa 48 (145)
.+++||++||++++++++ |++|+.+.. .|-.||++++++.|.
T Consensus 164 ~~v~vv~~~G~i~~~~~~---~~~~gyr~~~l~s~ggIIt~~~l~l~p~ 209 (326)
T 1hsk_A 164 DYALCVNEQGSLIKLTTK---ELELDYRNSIIQKEHLVVLEAAFTLAPG 209 (326)
T ss_dssp EEEEEECTTSCEEEEETT---TTTCBTTBCHHHHTTCEEEEEEEECEEC
T ss_pred EEEEEEeCCCCEEEEChH---HcCCCccccccCCCCEEEEEEEEEEEcC
Confidence 689999999999999875 677877752 343499999999998
No 28
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=96.69 E-value=0.0017 Score=54.20 Aligned_cols=45 Identities=13% Similarity=-0.009 Sum_probs=38.1
Q ss_pred eeeeEEEec-CCcEEEecCCCChhhHHHHhCCC--C---ce--EEEEEEEeeccCC
Q 042325 3 WRAPFIFTG-KGEFVTCTSQKDTELFYAVLGGL--G---QF--ITRARIVLGPAKE 50 (145)
Q Consensus 3 ~~~~evVtg-dGevv~cS~~~n~DLF~A~~GGl--G---~f--IT~ati~l~Pa~~ 50 (145)
-.++++|++ +|+++++++ .|+||+.|+++ + .+ ||+++++|.|.+.
T Consensus 131 v~~v~vv~~~~G~v~~~~~---~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 131 CAYVDSVELATGKQVRLTA---KECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp EEEEEEEETTTTEEEEEET---GGGTCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred eeEEEEEECCCCcEEEEeH---HHhccccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 367999996 999999985 68999999874 2 35 9999999999874
No 29
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=55.95 E-value=9.5 Score=25.74 Aligned_cols=26 Identities=15% Similarity=0.234 Sum_probs=20.7
Q ss_pred CCcEEEecCCCChhhHHHHhCCCCce
Q 042325 12 KGEFVTCTSQKDTELFYAVLGGLGQF 37 (145)
Q Consensus 12 dGevv~cS~~~n~DLF~A~~GGlG~f 37 (145)
..++..+.+.+.|+-||.++||-+.+
T Consensus 71 ~~~i~~v~eG~E~~~Fw~~LGg~~~~ 96 (104)
T 1kcq_A 71 RARVHVSEEGTEPEAMLQVLGPKPAL 96 (104)
T ss_dssp CSEEEEEETTCCCHHHHHHHCSCCCC
T ss_pred CCcEEEEeCCCCCHHHHHHcCCCCCC
Confidence 44577788888899999999997643
No 30
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=41.78 E-value=17 Score=25.01 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=16.8
Q ss_pred CcEEEecCCC--ChhhHHHHhCCCC
Q 042325 13 GEFVTCTSQK--DTELFYAVLGGLG 35 (145)
Q Consensus 13 Gevv~cS~~~--n~DLF~A~~GGlG 35 (145)
.++..+.+.+ .|+-||.++||-+
T Consensus 81 ~~i~vv~eg~~~E~~~Fw~~LGg~~ 105 (114)
T 1svq_A 81 PKVEVFCETDSDIPAEFWKLLGGKG 105 (114)
T ss_dssp SEEEECCCCTTCCCHHHHHHHTC--
T ss_pred ccEEEEeCCCcCCcHHHHHHcCCCC
Confidence 4566777777 7889999999865
Done!