Query 042326
Match_columns 163
No_of_seqs 156 out of 1040
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 08:32:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042326.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042326hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kvn_X Esterase ESTA; beta bar 99.3 8.6E-13 2.9E-17 117.4 4.4 54 105-163 10-68 (632)
2 3mil_A Isoamyl acetate-hydroly 64.7 1.4 4.9E-05 32.0 0.1 19 109-127 2-20 (240)
3 3rjt_A Lipolytic protein G-D-S 51.6 5.5 0.00019 28.1 1.3 17 110-126 8-24 (216)
4 4h08_A Putative hydrolase; GDS 42.9 8.6 0.00029 27.6 1.2 16 107-122 17-32 (200)
5 2pq0_A Hypothetical conserved 29.6 19 0.00066 26.8 1.3 16 110-125 199-214 (258)
6 3fzq_A Putative hydrolase; YP_ 29.1 20 0.00068 26.5 1.3 16 110-125 216-231 (274)
7 1vjg_A Putative lipase from th 28.6 11 0.00037 27.4 -0.2 17 109-125 19-35 (218)
8 3kd3_A Phosphoserine phosphohy 26.4 19 0.00065 24.9 0.7 17 109-125 163-179 (219)
9 2zos_A MPGP, mannosyl-3-phosph 24.6 24 0.00081 26.8 1.0 17 110-126 196-212 (249)
10 3r4c_A Hydrolase, haloacid deh 23.8 23 0.00079 26.4 0.8 17 109-125 209-225 (268)
11 3hp4_A GDSL-esterase; psychrot 23.8 20 0.00069 24.9 0.4 12 111-122 3-14 (185)
12 3mpo_A Predicted hydrolase of 23.6 26 0.00088 26.3 1.0 16 110-125 213-228 (279)
13 4ap9_A Phosphoserine phosphata 22.7 26 0.0009 23.9 0.8 17 109-125 149-165 (201)
14 4dw8_A Haloacid dehalogenase-l 22.6 25 0.00086 26.3 0.8 16 110-125 213-228 (279)
15 1l7m_A Phosphoserine phosphata 22.5 26 0.00089 24.2 0.8 16 109-124 158-173 (211)
16 3dnp_A Stress response protein 22.2 26 0.00088 26.4 0.8 16 110-125 218-233 (290)
17 3dc7_A Putative uncharacterize 21.8 27 0.00091 25.5 0.8 15 109-123 20-34 (232)
18 1u02_A Trehalose-6-phosphate p 21.7 20 0.0007 27.1 0.1 15 113-127 174-188 (239)
19 3dci_A Arylesterase; SGNH_hydr 21.4 18 0.00061 26.8 -0.2 14 109-122 22-35 (232)
20 3fvv_A Uncharacterized protein 21.2 34 0.0012 24.5 1.2 14 110-123 178-191 (232)
21 3pgv_A Haloacid dehalogenase-l 20.3 30 0.001 26.4 0.8 16 110-125 225-240 (285)
22 3dao_A Putative phosphatse; st 20.0 30 0.001 26.4 0.8 16 110-125 227-242 (283)
No 1
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa}
Probab=99.31 E-value=8.6e-13 Score=117.36 Aligned_cols=54 Identities=26% Similarity=0.223 Sum_probs=41.2
Q ss_pred CCCCCcCEEEEcCCcccccCCCccccccc----CCCCCCCCCCCCCCCCCCCCC-CCCCccccC
Q 042326 105 ESHPLVPALFVIGDSSVDSGTNNFLGTFA----RADRLPYGRDFDTHQPTGRFS-NGRIPVDYL 163 (163)
Q Consensus 105 ~~~~~fpAIFvFGDSLSDTGNn~~l~t~~----~a~~pPYGitffg~~PTGRFS-DGRliiDFI 163 (163)
....++++||+||||++||||+....... +-.+ |+|++|+ +|||| |||+|+|||
T Consensus 10 ~~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~-~~g~~~~----~Gr~s~~G~~~~D~i 68 (632)
T 3kvn_X 10 EAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTN-RVGPTYQ----NGSGEIFGPTAPMLL 68 (632)
T ss_dssp SCCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSC-BCSSSCC----TTSSCCBCCCHHHHH
T ss_pred cCCCCCccEEEEccccccCCCcccccCCcCCcccccc-CCCCccc----cCcccccCCchHHHH
Confidence 45678999999999999999986543211 1112 2488885 89999 999999986
No 2
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=64.75 E-value=1.4 Score=31.99 Aligned_cols=19 Identities=21% Similarity=0.265 Sum_probs=15.2
Q ss_pred CcCEEEEcCCcccccCCCc
Q 042326 109 LVPALFVIGDSSVDSGTNN 127 (163)
Q Consensus 109 ~fpAIFvFGDSLSDTGNn~ 127 (163)
.++.|++||||+++.|...
T Consensus 2 ~~~~i~~~GDSit~~g~~~ 20 (240)
T 3mil_A 2 DYEKFLLFGDSITEFAFNT 20 (240)
T ss_dssp CCEEEEEEESHHHHTTTCS
T ss_pred CcccEEEEccchhhhhcCc
Confidence 3578999999999977543
No 3
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=51.58 E-value=5.5 Score=28.14 Aligned_cols=17 Identities=35% Similarity=0.552 Sum_probs=14.2
Q ss_pred cCEEEEcCCcccccCCC
Q 042326 110 VPALFVIGDSSVDSGTN 126 (163)
Q Consensus 110 fpAIFvFGDSLSDTGNn 126 (163)
.+.|++||||+++.+..
T Consensus 8 ~~~i~~~GDSit~g~~~ 24 (216)
T 3rjt_A 8 GSKLVMVGDSITDCGRA 24 (216)
T ss_dssp TCEEEEEESHHHHTTCC
T ss_pred CCEEEEEeccccccCCC
Confidence 47999999999987654
No 4
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=42.95 E-value=8.6 Score=27.63 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=12.8
Q ss_pred CCCcCEEEEcCCcccc
Q 042326 107 HPLVPALFVIGDSSVD 122 (163)
Q Consensus 107 ~~~fpAIFvFGDSLSD 122 (163)
....|.|..+|||++.
T Consensus 17 ~~~~prVl~iGDSit~ 32 (200)
T 4h08_A 17 KTDLPHVLLIGNSITR 32 (200)
T ss_dssp CCSSCEEEEEESHHHH
T ss_pred cCCCCeEEEEchhHHh
Confidence 3456789999999985
No 5
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=29.57 E-value=19 Score=26.82 Aligned_cols=16 Identities=19% Similarity=0.299 Sum_probs=13.1
Q ss_pred cCEEEEcCCcccccCC
Q 042326 110 VPALFVIGDSSVDSGT 125 (163)
Q Consensus 110 fpAIFvFGDSLSDTGN 125 (163)
...+++||||.+|..-
T Consensus 199 ~~~~ia~GDs~NDi~m 214 (258)
T 2pq0_A 199 KKDVYAFGDGLNDIEM 214 (258)
T ss_dssp GGGEEEECCSGGGHHH
T ss_pred HHHEEEECCcHHhHHH
Confidence 4579999999999644
No 6
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=29.12 E-value=20 Score=26.55 Aligned_cols=16 Identities=19% Similarity=0.154 Sum_probs=13.0
Q ss_pred cCEEEEcCCcccccCC
Q 042326 110 VPALFVIGDSSVDSGT 125 (163)
Q Consensus 110 fpAIFvFGDSLSDTGN 125 (163)
...+++||||.+|..-
T Consensus 216 ~~~~i~~GD~~NDi~m 231 (274)
T 3fzq_A 216 QKETICFGDGQNDIVM 231 (274)
T ss_dssp STTEEEECCSGGGHHH
T ss_pred HHHEEEECCChhHHHH
Confidence 4569999999999644
No 7
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=28.58 E-value=11 Score=27.37 Aligned_cols=17 Identities=24% Similarity=0.270 Sum_probs=13.7
Q ss_pred CcCEEEEcCCcccccCC
Q 042326 109 LVPALFVIGDSSVDSGT 125 (163)
Q Consensus 109 ~fpAIFvFGDSLSDTGN 125 (163)
....|.++|||+++-..
T Consensus 19 ~~~~i~~lGDSit~g~~ 35 (218)
T 1vjg_A 19 TQIRICFVGDSFVNGTG 35 (218)
T ss_dssp EEEEEEEEESHHHHTTT
T ss_pred CCceEEEEccccccCCC
Confidence 45789999999998644
No 8
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=26.41 E-value=19 Score=24.86 Aligned_cols=17 Identities=24% Similarity=0.305 Sum_probs=13.7
Q ss_pred CcCEEEEcCCcccccCC
Q 042326 109 LVPALFVIGDSSVDSGT 125 (163)
Q Consensus 109 ~fpAIFvFGDSLSDTGN 125 (163)
....++.||||.+|.--
T Consensus 163 ~~~~~~~vGD~~~Di~~ 179 (219)
T 3kd3_A 163 IDGEVIAIGDGYTDYQL 179 (219)
T ss_dssp CCSEEEEEESSHHHHHH
T ss_pred CCCCEEEEECCHhHHHH
Confidence 34679999999999754
No 9
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=24.58 E-value=24 Score=26.78 Aligned_cols=17 Identities=24% Similarity=0.161 Sum_probs=13.9
Q ss_pred cCEEEEcCCcccccCCC
Q 042326 110 VPALFVIGDSSVDSGTN 126 (163)
Q Consensus 110 fpAIFvFGDSLSDTGNn 126 (163)
...++.||||.+|..-.
T Consensus 196 ~~~viafGD~~NDi~Ml 212 (249)
T 2zos_A 196 QIESYAVGDSYNDFPMF 212 (249)
T ss_dssp CEEEEEEECSGGGHHHH
T ss_pred CceEEEECCCcccHHHH
Confidence 46899999999996543
No 10
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=23.83 E-value=23 Score=26.39 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=13.3
Q ss_pred CcCEEEEcCCcccccCC
Q 042326 109 LVPALFVIGDSSVDSGT 125 (163)
Q Consensus 109 ~fpAIFvFGDSLSDTGN 125 (163)
....++.||||.+|..-
T Consensus 209 ~~~~~ia~GD~~NDi~m 225 (268)
T 3r4c_A 209 KVSEIMACGDGGNDIPM 225 (268)
T ss_dssp CGGGEEEEECSGGGHHH
T ss_pred CHHHEEEECCcHHhHHH
Confidence 34579999999999543
No 11
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=23.75 E-value=20 Score=24.93 Aligned_cols=12 Identities=17% Similarity=0.526 Sum_probs=10.5
Q ss_pred CEEEEcCCcccc
Q 042326 111 PALFVIGDSSVD 122 (163)
Q Consensus 111 pAIFvFGDSLSD 122 (163)
+.|.++|||++.
T Consensus 3 ~~i~~~GDSit~ 14 (185)
T 3hp4_A 3 NTILILGDXLSA 14 (185)
T ss_dssp EEEEEEECTTTT
T ss_pred CeEEEECCcccc
Confidence 478999999997
No 12
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=23.63 E-value=26 Score=26.30 Aligned_cols=16 Identities=19% Similarity=0.333 Sum_probs=11.0
Q ss_pred cCEEEEcCCcccccCC
Q 042326 110 VPALFVIGDSSVDSGT 125 (163)
Q Consensus 110 fpAIFvFGDSLSDTGN 125 (163)
...+++||||.+|..-
T Consensus 213 ~~~~i~~GD~~NDi~m 228 (279)
T 3mpo_A 213 ADDVMTLGDQGNDLTM 228 (279)
T ss_dssp GGGEEEC--CCTTHHH
T ss_pred HHHEEEECCchhhHHH
Confidence 4579999999999544
No 13
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=22.65 E-value=26 Score=23.95 Aligned_cols=17 Identities=18% Similarity=0.245 Sum_probs=13.1
Q ss_pred CcCEEEEcCCcccccCC
Q 042326 109 LVPALFVIGDSSVDSGT 125 (163)
Q Consensus 109 ~fpAIFvFGDSLSDTGN 125 (163)
....++.||||.+|.--
T Consensus 149 ~~~~~i~iGD~~~Di~~ 165 (201)
T 4ap9_A 149 RDGFILAMGDGYADAKM 165 (201)
T ss_dssp TTSCEEEEECTTCCHHH
T ss_pred CcCcEEEEeCCHHHHHH
Confidence 44678889999999644
No 14
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=22.56 E-value=25 Score=26.34 Aligned_cols=16 Identities=25% Similarity=0.302 Sum_probs=12.9
Q ss_pred cCEEEEcCCcccccCC
Q 042326 110 VPALFVIGDSSVDSGT 125 (163)
Q Consensus 110 fpAIFvFGDSLSDTGN 125 (163)
...++.||||.+|..-
T Consensus 213 ~~~~i~~GD~~NDi~m 228 (279)
T 4dw8_A 213 REEVIAIGDGYNDLSM 228 (279)
T ss_dssp GGGEEEEECSGGGHHH
T ss_pred HHHEEEECCChhhHHH
Confidence 4579999999999644
No 15
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=22.45 E-value=26 Score=24.17 Aligned_cols=16 Identities=19% Similarity=0.291 Sum_probs=12.7
Q ss_pred CcCEEEEcCCcccccC
Q 042326 109 LVPALFVIGDSSVDSG 124 (163)
Q Consensus 109 ~fpAIFvFGDSLSDTG 124 (163)
....+++||||.+|.-
T Consensus 158 ~~~~~~~iGD~~~Di~ 173 (211)
T 1l7m_A 158 NLEDTVAVGDGANDIS 173 (211)
T ss_dssp CGGGEEEEECSGGGHH
T ss_pred CHHHEEEEecChhHHH
Confidence 3456899999999963
No 16
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=22.20 E-value=26 Score=26.44 Aligned_cols=16 Identities=19% Similarity=0.198 Sum_probs=12.9
Q ss_pred cCEEEEcCCcccccCC
Q 042326 110 VPALFVIGDSSVDSGT 125 (163)
Q Consensus 110 fpAIFvFGDSLSDTGN 125 (163)
...+++||||.+|..-
T Consensus 218 ~~~~i~~GD~~NDi~m 233 (290)
T 3dnp_A 218 MDDVVAIGHQYDDLPM 233 (290)
T ss_dssp GGGEEEEECSGGGHHH
T ss_pred HHHEEEECCchhhHHH
Confidence 4578999999999543
No 17
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=21.78 E-value=27 Score=25.51 Aligned_cols=15 Identities=20% Similarity=0.107 Sum_probs=12.5
Q ss_pred CcCEEEEcCCccccc
Q 042326 109 LVPALFVIGDSSVDS 123 (163)
Q Consensus 109 ~fpAIFvFGDSLSDT 123 (163)
....|..+|||++..
T Consensus 20 ~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 20 SFKRPAWLGDSITAN 34 (232)
T ss_dssp CCSSEEEEESTTTST
T ss_pred CcceEEEEccccccc
Confidence 456899999999984
No 18
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=21.70 E-value=20 Score=27.14 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=12.3
Q ss_pred EEEcCCcccccCCCc
Q 042326 113 LFVIGDSSVDSGTNN 127 (163)
Q Consensus 113 IFvFGDSLSDTGNn~ 127 (163)
++.||||.+|..-..
T Consensus 174 via~GD~~ND~~Ml~ 188 (239)
T 1u02_A 174 AIIAGDDATDEAAFE 188 (239)
T ss_dssp EEEEESSHHHHHHHH
T ss_pred eEEEeCCCccHHHHH
Confidence 999999999965543
No 19
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=21.42 E-value=18 Score=26.82 Aligned_cols=14 Identities=21% Similarity=0.259 Sum_probs=11.6
Q ss_pred CcCEEEEcCCcccc
Q 042326 109 LVPALFVIGDSSVD 122 (163)
Q Consensus 109 ~fpAIFvFGDSLSD 122 (163)
..+.|.+||||++.
T Consensus 22 ~~~~I~~lGDSit~ 35 (232)
T 3dci_A 22 HMKTVLAFGDSLTW 35 (232)
T ss_dssp -CEEEEEEESHHHH
T ss_pred CCCEEEEEECcccc
Confidence 35789999999987
No 20
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=21.20 E-value=34 Score=24.51 Aligned_cols=14 Identities=21% Similarity=0.254 Sum_probs=12.1
Q ss_pred cCEEEEcCCccccc
Q 042326 110 VPALFVIGDSSVDS 123 (163)
Q Consensus 110 fpAIFvFGDSLSDT 123 (163)
...++++|||.+|.
T Consensus 178 ~~~~~~vGDs~~D~ 191 (232)
T 3fvv_A 178 FAESYFYSDSVNDV 191 (232)
T ss_dssp SSEEEEEECCGGGH
T ss_pred hhheEEEeCCHhhH
Confidence 46789999999996
No 21
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=20.26 E-value=30 Score=26.44 Aligned_cols=16 Identities=19% Similarity=0.314 Sum_probs=13.1
Q ss_pred cCEEEEcCCcccccCC
Q 042326 110 VPALFVIGDSSVDSGT 125 (163)
Q Consensus 110 fpAIFvFGDSLSDTGN 125 (163)
...++.||||.+|..-
T Consensus 225 ~~~~ia~GD~~NDi~m 240 (285)
T 3pgv_A 225 LSDCIAFGDGMNDAEM 240 (285)
T ss_dssp GGGEEEEECSGGGHHH
T ss_pred HHHEEEECCcHhhHHH
Confidence 4679999999999644
No 22
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=20.00 E-value=30 Score=26.45 Aligned_cols=16 Identities=19% Similarity=0.187 Sum_probs=12.9
Q ss_pred cCEEEEcCCcccccCC
Q 042326 110 VPALFVIGDSSVDSGT 125 (163)
Q Consensus 110 fpAIFvFGDSLSDTGN 125 (163)
...++.||||.+|..-
T Consensus 227 ~~e~ia~GD~~NDi~m 242 (283)
T 3dao_A 227 PDEVCCFGDNLNDIEM 242 (283)
T ss_dssp GGGEEEEECSGGGHHH
T ss_pred HHHEEEECCCHHHHHH
Confidence 4569999999999543
Done!