BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042331
(378 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XIP1|PELO_RAT Protein pelota homolog OS=Rattus norvegicus GN=Pelo PE=2 SV=1
Length = 385
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/377 (48%), Positives = 274/377 (72%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M++VRKD+ + G V ++P + +D+W YNLV GDS+ A T+RKV ++ +G + R
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V+ L + VEA+D+D + LR+ G NI ENE+VK+GA+H++E+E +R F L K WDSV
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
L+ + QA D A +AD+A V+MQEGLA++ LV SMT+TR+++E +IPRK ++++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
AL +F++ V+ A +H++F VV+C ++ASPGF ++QF Y+ +A +T + ++ N+S+
Sbjct: 181 ALERFYEQVVQAIQRHINFEVVKCILVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
+ VH SSG+K+SL+EVL V + + +TKAA EVK L +F+ ML ++P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEVLCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A+E +A+ TLLI+D+LFR+ ++ATR +YV LV+SVK++ GT IFSS+H SGEQLGQLT
Sbjct: 301 RANEALAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLGQLT 360
Query: 361 GVAAILRFPLPDLEDIE 377
GVAAILRFP+P+L D E
Sbjct: 361 GVAAILRFPVPELSDQE 377
>sp|P48612|PELO_DROME Protein pelota OS=Drosophila melanogaster GN=pelo PE=2 SV=2
Length = 395
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 179/371 (48%), Positives = 270/371 (72%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M+++ K + G+V ++P +S+D+W AYNL+ GDSV + T+RKV +T +G + R
Sbjct: 1 MKLLGKYVDKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V+ L I VE++D+D + LR+ G+NI EN++VK+GA+H+L++EL+R F L K WD++
Sbjct: 61 VRTTLTIAVESIDFDTQACVLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDTI 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
AL+ + A D +AD+A V+MQEGLA++ L+ SMT+ RS+IE SIPRK +V ++E
Sbjct: 121 ALERIEMACDPTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEK 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
L KF++ V+ + L+HV+F+VV+C +IASPGF +DQF+ Y+ +A + + ++ NKS+
Sbjct: 181 GLAKFYEQVMQSILRHVNFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
++VH SSG+KHSLRE+L V+ + +TKAA EVK L++F+ ML +P +A YG KHV
Sbjct: 241 MLVHASSGFKHSLREILQDPAVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHVL 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A E A++TLLI+D+LFR +++ RK+YV+LV S++D+GG IFSSMH SGEQL QLT
Sbjct: 301 QAAESQAIETLLISDNLFRCQDVSLRKEYVNLVESIRDAGGEVKIFSSMHISGEQLAQLT 360
Query: 361 GVAAILRFPLP 371
G+AA+LRFP+P
Sbjct: 361 GIAALLRFPMP 371
>sp|Q58DV0|PELO_BOVIN Protein pelota homolog OS=Bos taurus GN=PELO PE=2 SV=2
Length = 385
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/377 (48%), Positives = 272/377 (72%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M++VRKD+ + G V ++P + +D+W YNLV GDS+ A T+RKV ++ +G + R
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V+ L + VEA+D+D + LR+ G NI ENE+VK+GA+H++E+E +R F L K WDSV
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
L+ + QA D A +AD+A V+MQEGLA+I LV SMT+TR+++E +IPRK ++++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
AL +F++ V+ A +H+ F+VV+C ++ASPGF ++QF Y+ +A +T + ++ N+S+
Sbjct: 181 ALERFYEQVVQAIQRHIHFDVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
+ VH SSG+K+SL+E L V + + +TKAA EVK L +F+ ML ++P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A+E MA+ TLLI+D+LFR+ ++ATR +YV LV+SVK++ GT IFSS+H SGEQL QLT
Sbjct: 301 KANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLT 360
Query: 361 GVAAILRFPLPDLEDIE 377
G+AAILRFP+P+L D E
Sbjct: 361 GIAAILRFPVPELSDQE 377
>sp|Q80X73|PELO_MOUSE Protein pelota homolog OS=Mus musculus GN=Pelo PE=2 SV=3
Length = 385
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 182/377 (48%), Positives = 273/377 (72%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M++VRKD+ + G V ++P + +D+W +NLV GDS+ A T+RKV ++ +G + R
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTFNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V+ L + VEA+D+D + LR+ G NI ENE+VK+GA+H++E+E +R F L K WDSV
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
L+ + QA D A +AD+A V+MQEGLA++ LV SMT+TR+++E +IPRK ++++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
AL +F++ V+ A +H++F VV+C ++ASPGF ++QF Y+ +A +T + ++ N+S+
Sbjct: 181 ALERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
+ VH SSG+K+SL+E L V + + +TKAA EVK L +F+ ML ++P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A+E +A+ TLLI+D+LFR+ ++ATR +YV LV+SVK++ GT IFSS+H SGEQLGQLT
Sbjct: 301 RANEALAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLGQLT 360
Query: 361 GVAAILRFPLPDLEDIE 377
GVAAILRFP+P+L D E
Sbjct: 361 GVAAILRFPVPELSDQE 377
>sp|Q9BRX2|PELO_HUMAN Protein pelota homolog OS=Homo sapiens GN=PELO PE=1 SV=2
Length = 385
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/377 (48%), Positives = 272/377 (72%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M++VRK++ + G V ++P + +D+W YNLV GDS+ A T+RKV ++ +G + R
Sbjct: 1 MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V+ L + VEA+D+D + LR+ G NI ENE+VK+GA+H++E+E +R F L K WDSV
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
L+ + QA D A +AD+A V+MQEGLA+I LV SMT+TR+++E +IPRK ++++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
AL +F++ V+ A +H+ F+VV+C ++ASPGF ++QF YL +A +T + ++ N+S+
Sbjct: 181 ALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYLFQQAVKTDNKLLLENRSKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
+ VH SSG+K+SL+E L V + + +TKAA EVK L +F+ ML ++P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A+E MA+ TLLI+D+LFR+ ++ATR +YV LV+SVK++ GT IFSS+H SGEQL QLT
Sbjct: 301 KANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLT 360
Query: 361 GVAAILRFPLPDLEDIE 377
GVAAILRFP+P+L D E
Sbjct: 361 GVAAILRFPVPELSDQE 377
>sp|Q7ZWC4|PELO_DANRE Protein pelota homolog OS=Danio rerio GN=pelo PE=2 SV=1
Length = 385
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/377 (48%), Positives = 270/377 (71%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M++V KD+ + G V +IP +++D+W YNL+ GDS+ A T+RKV ++ +G + R
Sbjct: 1 MKLVHKDIEKDNAGQVTLIPDEAEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSSR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V+ L + VE +D+D + LR+ G NI EN++VK+GA+H++E+EL+R F L K VWDSV
Sbjct: 61 VRTTLTLCVETIDFDSQACQLRVKGTNIQENQYVKMGAYHTIELELNRKFTLAKKVWDSV 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
LD + QA D A AD+A V+MQEGLAN+ LV +MT+ R+++E +IPRK + +++
Sbjct: 121 VLDRIEQACDPAQKADVAAVVMQEGLANLVLVTPAMTLLRAKVEVTIPRKRKGSCTQHDK 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
AL +F+++V+ L+H +F+VV+C ++ASPGF KDQF YL EA R + ++ N+S+
Sbjct: 181 ALERFYEAVMQGILRHFNFDVVKCILVASPGFVKDQFISYLFKEAVRQDCKLLLENRSKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
++VH+SSG+K+SL+EVL V + +TKAA EVK L++F+ ML +P RA YG HVE
Sbjct: 241 MVVHSSSGHKYSLKEVLCDPAVTARLSDTKAAGEVKALEDFYKMLQQEPDRAFYGLAHVE 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A E +A+ LLI+D LFR+ ++ATR +YV LV++VK++GGT IFSS+H SGEQL QL+
Sbjct: 301 RASEALAIDILLISDTLFRHQDVATRGRYVRLVDNVKENGGTVRIFSSLHVSGEQLNQLS 360
Query: 361 GVAAILRFPLPDLEDIE 377
GVAAILRFP+ D+ + E
Sbjct: 361 GVAAILRFPIADVSEPE 377
>sp|Q5RCE3|PELO_PONAB Protein pelota homolog OS=Pongo abelii GN=PELO PE=2 SV=1
Length = 385
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/377 (48%), Positives = 272/377 (72%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M++VRK++ + G V ++P + +D+W YNLV GDS+ A T+RKV ++ +G + R
Sbjct: 1 MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V+ L + VEA+D+D + LR+ G NI ENE+VK+GA+H++E+E +R F L K WDSV
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
L+ + QA D A +AD+A V+MQEGLA+I LV SMT+TR+++E +IPRK ++++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
AL +F++ V+ A +H+ F+VV+C ++ASPGF ++QF Y+ +A +T + ++ N+S+
Sbjct: 181 ALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
+ VH SSG+K+SL+EVL V + + +TKAA EVK L +F+ ML + P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEVLCDPTVASRLSDTKAAGEVKALDDFYKMLQHGPDRAFYGLKQVE 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A+E MA+ TLLI+D+LFR+ ++ATR +YV LV+SVK++ GT IFSS+H SGEQL QLT
Sbjct: 301 KANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLT 360
Query: 361 GVAAILRFPLPDLEDIE 377
GVAAILRFP+P+L D E
Sbjct: 361 GVAAILRFPVPELSDQE 377
>sp|Q5ZK01|PELO_CHICK Protein pelota homolog OS=Gallus gallus GN=PELO PE=2 SV=1
Length = 385
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/377 (48%), Positives = 272/377 (72%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M++VRKDL + G V +IP + +D+W YNL+ GDS+ A T+RKV ++ +G + R
Sbjct: 1 MKLVRKDLEKDNAGQVTLIPEEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
++ L + VEA+D+D + LR+ G NI ENE+VK+GA+H++E+E +R F L K WDSV
Sbjct: 61 IRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
L+ + QA D A AD+A V+MQEGLA++ LV SMT+TR+++E +IPRK ++++
Sbjct: 121 VLERIEQACDPAWNADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
AL +F++ V+ A +H++F VV+C ++ASPGF ++QF Y+ +A +T + ++ N+S+
Sbjct: 181 ALERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
+ VH+SSG+K+ L+E L V + + +TKAA EVK L +F+ ML ++P RA YG KHVE
Sbjct: 241 LQVHSSSGHKYVLKEALCDPAVTSRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKHVE 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A+E MA+ TLLI+D+LFR+ ++ATR +YV LV+SV+++ GT IFSS+H SGEQLGQLT
Sbjct: 301 KANEAMAIDTLLISDELFRHQDVATRARYVKLVDSVRENMGTVRIFSSLHVSGEQLGQLT 360
Query: 361 GVAAILRFPLPDLEDIE 377
GVAAILRFP+ +L D E
Sbjct: 361 GVAAILRFPVAELSDQE 377
>sp|Q5U567|PELO_XENLA Protein pelota homolog OS=Xenopus laevis GN=pelo PE=2 SV=1
Length = 383
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/373 (49%), Positives = 267/373 (71%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M+++RKD+ + G V +IP +++D+W YNL++ GDS+ A T+RKV ++ +G + R
Sbjct: 1 MKLIRKDIEKDNAGQVTLIPEEAEDMWHTYNLLHVGDSLQASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V+ L I VE +D+D + LR+ G NI EN++VK+GA+H++E+E +R F L K WDS+
Sbjct: 61 VRTTLTICVETIDFDSQACQLRVKGINIQENQYVKMGAYHTIELEPNRKFTLAKKQWDSI 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
L+ + QA D A +AD+A V+MQEGLA+I LV SMT+ R++IETSIPRK ++E
Sbjct: 121 VLERIEQACDPAFSADVAAVVMQEGLAHICLVTPSMTLLRAKIETSIPRKRRGNCTQHEK 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
AL KF++ V+ L+H++F+VV+ ++ASPGF ++QF +L L A + L+ ++ N+ +
Sbjct: 181 ALEKFYEQVMQGILRHINFDVVKVVLVASPGFVREQFCEFLFLRAVKQDLKILLENRGKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
+ VH+SSG K+SL EVL V + +TKAA E+K L +F+ ML ++P RA YG K VE
Sbjct: 241 LQVHSSSGRKYSLTEVLCDPAVTARLSDTKAACEIKALGDFYKMLQHEPDRAFYGIKQVE 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A+E +AV TLL+TD+LFR+ ++ TR +YV LV+SVKD+GGT IFSS+H SGEQL QLT
Sbjct: 301 KANEALAVDTLLVTDELFRHQDVPTRTRYVRLVDSVKDNGGTVRIFSSLHVSGEQLNQLT 360
Query: 361 GVAAILRFPLPDL 373
GVAAILRFP+ DL
Sbjct: 361 GVAAILRFPVADL 373
>sp|P50444|YNU6_CAEEL Uncharacterized protein R74.6 OS=Caenorhabditis elegans GN=R74.6
PE=3 SV=1
Length = 381
Score = 330 bits (847), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 165/378 (43%), Positives = 256/378 (67%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M+ ++ + +G G V ++ +++D+W YNL+ GD + A T+RKVV +T +G ++R
Sbjct: 1 MKQFKRGIERDGTGFVVLMAEEAEDMWHIYNLIRIGDIIKASTIRKVVSETSTGTTSSQR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V L + VE++D+D L + G+NI EN+ VK+GA+H++++E +R F L K WDS+
Sbjct: 61 VHTMLTVSVESIDFDPGAQELHLKGRNIEENDIVKLGAYHTIDLEPNRKFTLQKTEWDSI 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
L+ L+ A D A AD+A V++ EGLAN+ L+ +MT+TR++I+ +IPRK +++E
Sbjct: 121 DLERLNLALDPAQAADVAAVVLHEGLANVCLITPAMTLTRAKIDMTIPRKRKGFTSQHEK 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
L KF+++V AF++HV+ VV+C ++AS GF KD F ++L+ A+ + +++
Sbjct: 181 GLEKFYEAVSTAFMRHVNLQVVKCVIVASRGFVKDAFMQHLIAHADANGKKFTTEQRAKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
++ H+SSG+KH+L+EVL+ V + +TKA EVK L +F ++S +P RA YG HV
Sbjct: 241 MLTHSSSGFKHALKEVLETPQVALRLADTKAQGEVKALNQFLELMSTEPDRAFYGFNHVN 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A++ +A++TLL+ D LFR +I TR+KYV LV SV++ G HIFSSMH SGEQL QLT
Sbjct: 301 RANQELAIETLLVADSLFRAQDIETRRKYVRLVESVREQNGKVHIFSSMHVSGEQLAQLT 360
Query: 361 GVAAILRFPLPDLEDIEM 378
G AAILRFP+PDL+D M
Sbjct: 361 GCAAILRFPMPDLDDEPM 378
>sp|Q9USL5|DOM34_SCHPO Protein dom34 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=dom34 PE=1 SV=1
Length = 390
Score = 309 bits (792), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 238/370 (64%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M++++K++ NG G + M P + +D+W YN++ GD + A TVR+VV+ +G R
Sbjct: 1 MKLIQKNIEKNGSGWITMCPEEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGSR 60
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV 120
V +KL I VE +D+D + + L I G+ + VK+G++H+L++ELHR F L K+ WD+
Sbjct: 61 VVMKLRILVENMDFDTKAAQLHIKGRTTEYHPEVKMGSYHTLDLELHRNFTLYKNEWDAF 120
Query: 121 ALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES 180
ALD + A + + A++ V++ EGLANI L+ MTI R RI+ IPRK + Y+
Sbjct: 121 ALDRVDAACNPSRNAEIGAVVLDEGLANICLITDYMTILRQRIDQVIPRKRRGDSSAYQK 180
Query: 181 ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRI 240
L+KF+DSV + DF+ ++ ++ASPGF + Y+ A + L+ I+ +K++
Sbjct: 181 GLDKFYDSVFQSINSEFDFDKLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVKSKNKF 240
Query: 241 VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE 300
VI+H+S+G+ HSL E+L V + + +TK QE++VL +F+++++ D +A YGP HV
Sbjct: 241 VILHSSTGHIHSLNEILKDPAVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYGPNHVL 300
Query: 301 VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLT 360
A E A+ LLI+D LFR+ +IATRKK+V LV VK+ +IFSS+H SG+QL L+
Sbjct: 301 KAFELGAIGELLISDSLFRSSDIATRKKWVSLVEGVKEINCPVYIFSSLHESGKQLDLLS 360
Query: 361 GVAAILRFPL 370
G+AAIL +P+
Sbjct: 361 GIAAILTYPV 370
>sp|P33309|DOM34_YEAST Protein DOM34 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DOM34 PE=1 SV=2
Length = 386
Score = 208 bits (530), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 210/383 (54%), Gaps = 10/383 (2%)
Query: 1 MRIV--RKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDA 58
M+++ +KD G + ++P D +DL+ Y +V+ D + + +K + GK
Sbjct: 1 MKVISLKKDSFNKGGAVITLLPEDKEDLFTVYQIVDKDDEL--IFKKKFTSKLDEAGKKK 58
Query: 59 ERVKLKLEIKVEALDYDKEGSALRISGKNILE-----NEHVKIGAFHSLEIELHRPFVLT 113
+KL+IKV + D+D + L+ G + + N + +G + S ++ PF +
Sbjct: 59 STDLVKLKIKVISEDFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTII 118
Query: 114 KDVWDSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGP 173
K ++ L++A + +D A V++QEG+A++ LV S TI + +IE S+P+K
Sbjct: 119 KQNFNKFMQKLLNEACNIEYKSDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRT 178
Query: 174 A-VARYESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRP 232
V +++ KF+ ++ A K ++F+ ++ ++ SPGF + AE +
Sbjct: 179 TDVLKFDEKTEKFYKAIYSAMKKDLNFDKLKTIILCSPGFYAKILMDKIFQYAEEEHNKK 238
Query: 233 IIANKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRA 292
I+ NK I H S+GY + EVL + +++TK ++E+ V+ EF L+ D +A
Sbjct: 239 ILDNKGMFFIAHCSTGYLQGINEVLKNPLYASKLQDTKYSKEIMVMDEFLLHLNKDDDKA 298
Query: 293 CYGPKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFS 352
YG K V A E A+ LL+TD + + IA R++Y+ L++SV+ +GG A + S++H
Sbjct: 299 WYGEKEVVKAAEYGAISYLLLTDKVLHSDNIAQREEYLKLMDSVESNGGKALVLSTLHSL 358
Query: 353 GEQLGQLTGVAAILRFPLPDLED 375
GE+L QLTG+A IL++PLPDL++
Sbjct: 359 GEELDQLTGIACILKYPLPDLDE 381
>sp|O27679|PELO_METTH Protein pelota homolog OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pelA PE=3 SV=2
Length = 353
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 188/378 (49%), Gaps = 34/378 (8%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
MRIV +D G ++++P DDLW +++ GD + A T R++ Q SG K
Sbjct: 1 MRIVEED---EKNGVIELVPETLDDLWHLSHIIEEGDLLSARTTRRI--QDTSGEKIRSD 55
Query: 61 VKLK----LEIKVEALDYDKEGSALRISGKNILE---NEHVKIGAFHSLEIELHRPFVLT 113
+K L I+VE + + LR +G ++E + V +G+ H+LE++L+ P +
Sbjct: 56 RGVKKTFYLGIRVETVSFHIYTGRLRATG--VIERGPEDLVPMGSHHTLEVKLNTPLRIQ 113
Query: 114 KDVWDSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGP 173
K+ W L L A ++ +++M++ +A + L+ + R I IP K
Sbjct: 114 KEHWSRWTLKRLRMAVRASKNLKAIILVMEDDVAELGLIRQYGVEYRGPITGHIPGKR-- 171
Query: 174 AVARYESALNK-FFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRP 232
R L + F++S++ + K+ D + +IA PGF K F+ YL+ ER P
Sbjct: 172 IQQRDRGKLRREFYESIVESLQKYGDLETI---IIAGPGFYKSDFYDYLM---ERY---P 222
Query: 233 IIANKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRA 292
IA K+ V+ +T +G + + EVL V + E + A E++ + EF L+ DP
Sbjct: 223 EIAKKA--VLENTGTGGRAGISEVLRKGTVERVSSEKRIASEIRNVNEFLEKLARDPDSV 280
Query: 293 CYGPKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFS 352
YG V A AV+ LL+ D + +I + Y+D+V S+ GG+ + SS H
Sbjct: 281 VYGKVEVMDAINMGAVEKLLVLDRVVSREDI---EGYLDMVESM---GGSVVLISSEHEG 334
Query: 353 GEQLGQLTGVAAILRFPL 370
G+QL L G+A ILRF +
Sbjct: 335 GKQLESLGGLAGILRFKI 352
>sp|C5A5T8|PELO_THEGJ Protein pelota homolog OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=pelA PE=3 SV=1
Length = 357
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 190/361 (52%), Gaps = 23/361 (6%)
Query: 14 GSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKS-GGKDAERVKLKLEIKVEAL 72
G VK+ DDLW Y++++ GD V A T+RK +++ S + E + + L +K E +
Sbjct: 11 GIVKVKAETLDDLWHLYHVIDPGDVVYAKTLRKQAQRSDSLRAEKVEVIPVYLGVKAEKI 70
Query: 73 DYDKEGSALRISGKNILEN-EHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDS 131
++ K + +R++G + + + V +G +H++ IE + K W ++ L +A ++
Sbjct: 71 NFHKFANQVRVTGPIVYASRDDVPLGKYHTITIEEGTVVTIQKPRWKEHHIERLKEAIEA 130
Query: 132 AATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARY----ESALNKFFD 187
+ A + +V++ EG A+I LV R + + SI R G RY ES +FF
Sbjct: 131 SKRAKVMIVVIDEGEADIALV-REYGVE---MVASIRRNLGGK--RYNTDRESEEKRFFH 184
Query: 188 SVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSS 247
+ + ++ + A++A PGF K+ FH++L + P +A K +VI TS
Sbjct: 185 DLAKTMAELMEREKIEKAIVAGPGFVKEDFHKFL------RENYPELAKK--VVIEDTSV 236
Query: 248 GYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMA 307
+ + EV+ V + E + A+EV+++++ ++ + A YG + VE A A
Sbjct: 237 TGRTGIYEVIKRGTVDRVYHENRVAKEVQLVEKVLEHVARNTGLATYGLREVEEAVNYGA 296
Query: 308 VQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILR 367
V+TLL+ D+L + R++ +L+++V+ + G I SS H GE+L L G+AA+LR
Sbjct: 297 VETLLVLDELLKG---EHRERIEELMDAVRYARGEVVIVSSEHEGGEKLKALGGLAALLR 353
Query: 368 F 368
F
Sbjct: 354 F 354
>sp|B6YUV3|PELO_THEON Protein pelota homolog OS=Thermococcus onnurineus (strain NA1)
GN=pelA PE=3 SV=1
Length = 357
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 195/374 (52%), Gaps = 26/374 (6%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKS-GGKDAE 59
M+I+ +D P G VK+ DDLW Y++++ GD V A T+RK +++ S + E
Sbjct: 1 MQIIHED--PK-EGKVKVKAETLDDLWHLYHIIDEGDVVYAKTLRKQSQRSDSLRAEKVE 57
Query: 60 RVKLKLEIKVEALDYDKEGSALRISGKNILEN-EHVKIGAFHSLEIELHRPFVLTKDVWD 118
+ + L ++ E +++ K + +R++G + + E V +G +H++ IE + K W
Sbjct: 58 VIPVFLGVRAEKINFHKFANQVRVTGPIVYASREDVPLGKYHTIAIEEGTVVTIQKPRWK 117
Query: 119 SVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARY 178
++ L +A ++ A + +V++ +G A++ LV R + I TSI +H RY
Sbjct: 118 EHHIERLREAVSASKRARVMIVVIDDGEADMALV-REYGVE---ILTSI--RHNLGGKRY 171
Query: 179 ----ESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPII 234
E+ +FF V + ++ V A++A PGF K+ F+++L R ++
Sbjct: 172 NTDREAEEKRFFHDVAKTMEEIMNREKVEKAIVAGPGFVKEDFYKFL-----RENYPELV 226
Query: 235 ANKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACY 294
++VI TS + + EV+ V + E + A+EV+++++ ++ + Y
Sbjct: 227 ---KKVVIEDTSVTGRTGIYEVIKRGTVDRVYHENRVAKEVQLIEKVLENIAKNNGLVAY 283
Query: 295 GPKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGE 354
G + VE A AV+TLL+ D+L + R+K +L+++V+ S G I SS H GE
Sbjct: 284 GLREVEEAANYGAVETLLVLDELLKG---EMREKIEELMDAVRYSRGEVVIVSSEHEGGE 340
Query: 355 QLGQLTGVAAILRF 368
+L L G+AA+LRF
Sbjct: 341 KLKALGGLAALLRF 354
>sp|Q0W6H4|PELO_UNCMA Protein pelota homolog OS=Uncultured methanogenic archaeon RC-I
GN=pelA PE=3 SV=1
Length = 357
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 27/363 (7%)
Query: 14 GSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKV------VRQTKSGGKDAERVKLKLEI 67
G + + P DDLW +V GD+V A+T R V +R K E+ ++L I
Sbjct: 13 GEISLQPESLDDLWHLKYIVEPGDTVFAMTFRAVDSVSDKIRPDK-----VEKKLVRLGI 67
Query: 68 KVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQ 127
KVE+ ++ K + LRI G I + + GA+H+L IE + + K W S ++ +
Sbjct: 68 KVESTEFHKFSNRLRIKGTIISD---LDAGAYHTLNIEPYSELSIAKH-WKSDQIERIRD 123
Query: 128 ASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYESALNKFFD 187
A +++ ++ +V ++EG A I + + SRI + K A AR +FF
Sbjct: 124 AVEASKRPEVEIVTIEEGEAAIGYLRQYGIEEVSRIRQASSGKREGADARSVDGRGEFFG 183
Query: 188 SVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSS 247
V A LK+ D V+ V+A PGF KD F ++L + P +A K +++ TSS
Sbjct: 184 EVA-AQLKYAD--KVQTIVVAGPGFIKDDFVKFLRVN------HPAVAQK--VIVEDTSS 232
Query: 248 GYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMA 307
+EVL + + +E + +E ++++ + ++ D +A YG + A + A
Sbjct: 233 IGSSGFQEVLRRGAIQRVAEENRITREAQLIEALLSEIAKD-GKATYGFAETKRAVDYGA 291
Query: 308 VQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILR 367
V+TLLI D+ R + L+ V+ + G +FS+ G++L +L GVA+ILR
Sbjct: 292 VETLLIADETLRGLREKGARDIESLMRDVEHARGKVVVFSTEFEPGQRLEKLGGVASILR 351
Query: 368 FPL 370
FP+
Sbjct: 352 FPI 354
>sp|Q5JIB9|PELO_PYRKO Protein pelota homolog OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pelA PE=3 SV=1
Length = 357
Score = 134 bits (338), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 187/361 (51%), Gaps = 23/361 (6%)
Query: 14 GSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKS-GGKDAERVKLKLEIKVEAL 72
G VK+ DDLW Y++++ GD V A T+RK ++ S + E + + L ++ E +
Sbjct: 11 GKVKVKAETLDDLWHLYHIIDPGDIVYAKTLRKQAQRADSLRAEKVEVIPVFLGVQAEKI 70
Query: 73 DYDKEGSALRISGKNILEN-EHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDS 131
++ K + +R++G + + E V +G +H++ IE + K W ++ L +A +
Sbjct: 71 NFHKFANQVRVTGPIVYASREDVPLGKYHTIAIEQGTVVTIQKPRWKEHHIERLKEAVAA 130
Query: 132 AATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARY----ESALNKFFD 187
+ A + +V++ +G A++ LV R + I SI +H RY ES KFF
Sbjct: 131 SKRARVMIVVIDDGEADMALV-REYGV---EILNSI--RHNLGGKRYNTDRESEEMKFFH 184
Query: 188 SVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSS 247
V + + V A++A PGF K+ F+++L + P +A K +VI TS
Sbjct: 185 DVAKTMEEVMKRENVEKAIVAGPGFVKEDFYKFL------KEKYPELAKK--VVIEDTSV 236
Query: 248 GYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMA 307
+ + EV+ V + +E + A+EV+++++ ++ + YG K VE A A
Sbjct: 237 TGRTGIYEVIKRGVVDRVYQENRVAKEVQLVEKVLENIARNNGLVAYGLKEVEEAVNYGA 296
Query: 308 VQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILR 367
V+TLL+ D+L + R+K +L+++V+ S G + SS H GE+L L G+AA+LR
Sbjct: 297 VETLLVLDELLKG---ELREKVEELMDAVRYSRGEVVVVSSEHEGGEKLKALGGLAALLR 353
Query: 368 F 368
F
Sbjct: 354 F 354
>sp|Q57638|PELO_METJA Protein pelota homolog OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pelA PE=3 SV=1
Length = 347
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 184/360 (51%), Gaps = 31/360 (8%)
Query: 16 VKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER---VKLKLEIKVEAL 72
+K++P + DDLW YN++ GD + AVT R+V Q K A+R K+ L I+V+ +
Sbjct: 13 IKLMPENLDDLWVLYNIIEEGDKIFAVTERRV--QDKGDVIRADRGAKRKMFLGIEVKNV 70
Query: 73 DYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDSA 132
++D+ +RI G I + V +G+ H++EI+ + K+ W ++ + +A +S+
Sbjct: 71 EFDENTKRVRILGTIIHGPDDVPLGSHHTIEIKPFDELSIEKN-WKKWQIERIKEAIESS 129
Query: 133 ATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYE--SALNKFFDSVL 190
+ VV+M + A+IF V R +I E + H Y+ L K + +
Sbjct: 130 KRPKVLVVVMDDEEADIFEV-RDYSIK----EICSIKSHTSKKLDYKINEELKKEYYHEI 184
Query: 191 HAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSSGYK 250
L D + + ++A PGF K+ F+ ++ + P + NK IV+ S+ +
Sbjct: 185 AKVLSEYDVDNI---LVAGPGFAKNSFYNFI------SSQYPELKNK--IVVESISTTSR 233
Query: 251 HSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMAVQT 310
L EV+ + + E++ A+E +++++ ++ A YG V+ A E A+ T
Sbjct: 234 AGLNEVIKRGIINRIYAESRVAKETQLIEKLLEEIAKKGL-AVYGIDEVKKALEYSAIDT 292
Query: 311 LLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILRFPL 370
LL++D L RN EI ++++ ++ GG I SS H +G+QL L G+A +LRFP+
Sbjct: 293 LLVSDSLVRNHEIEK------IIDTTEEMGGKVVIVSSEHDAGKQLKALGGIAGLLRFPI 346
>sp|Q2NFD9|PELO_METST Protein pelota homolog OS=Methanosphaera stadtmanae (strain DSM
3091) GN=pelA PE=3 SV=1
Length = 351
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 191/376 (50%), Gaps = 31/376 (8%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
MRI +D G ++++P DDLW ++V D V +T R++ + SG A+R
Sbjct: 1 MRITNQD---KKQGLIEVVPETIDDLWHLSHIVEVNDYVSTLTARRI-QDNNSGKTRADR 56
Query: 61 -VKLK--LEIKVEALDYDKEGSALRISGKNILEN---EHVKIGAFHSLEIELHRPFVLTK 114
VK K L I+VE +++ K LR +G I+E+ + + +G+ H++ ++L+ + K
Sbjct: 57 GVKKKFFLGIRVEKINFHKYTGMLRFTG--IIESGPEDLIPLGSHHTINVQLNNSIRIKK 114
Query: 115 DVWDSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPA 174
+W+ +L+ L+QA +++ A+ +V +++ + ++ + I I K
Sbjct: 115 -IWNKWSLERLNQAIEASNRANEIIVAIEDNTTELGIIKQYGIDYIGPIIGDISGKQNIE 173
Query: 175 VARYESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPII 234
R + +N++++ + + D + + +I PGFTK+ ++ YL + P +
Sbjct: 174 KNRAQK-VNEYYEDITKTLTQQKDIDKL---IIIGPGFTKNGYYNYL------EENYPKL 223
Query: 235 ANKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACY 294
A K +++ T +G ++EVL + +L K+ K A+E ++ + + Y
Sbjct: 224 AKK--VILESTGAGGHAGIQEVLKNGLIESLSKDAKIAKEAALVNKLLEQIGKSSNTVTY 281
Query: 295 GPKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGE 354
G K V A AV+ LL+ +DL R+ I +++N+V++ GG I SS H +G+
Sbjct: 282 GKKQVITASNMGAVEKLLVLEDLVRDKNIQ------NIMNTVENMGGVVTIISSQHDAGQ 335
Query: 355 QLGQLTGVAAILRFPL 370
QL L +AA LR+P+
Sbjct: 336 QLKALGSLAAFLRYPI 351
>sp|A6UR75|PELO_METVS Protein pelota homolog OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=pelA PE=3 SV=1
Length = 348
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 184/365 (50%), Gaps = 40/365 (10%)
Query: 16 VKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVV-RQTKSGGKDAERVKLKLEIKVEALDY 74
+K++P + DDLW ++V A ++V +VT R+ + K + ++ L IKVE + +
Sbjct: 13 IKVMPENLDDLWHLSHIVQAYNAVYSVTERRTEDKGDKLRADRGTKRRVFLGIKVEKVSF 72
Query: 75 DKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDSAAT 134
+E + LR+SGK I E + IG++H+L+IE + K+ W L L +A +S
Sbjct: 73 HEEVNRLRVSGKIIHAPEDIPIGSYHTLDIEPFTQISIQKN-WKKWDLTRLKEAEESGKR 131
Query: 135 ADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHG-PAVARYESALNKFFDSVLHAF 193
+ VV++ + A+IF V R G +A +S ++K DS +
Sbjct: 132 PKVVVVILDDSEADIFTV----------------RDFGVKELASIKSGVSKRIDSKQNEQ 175
Query: 194 LKHVDFNVVRCAV--------IASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHT 245
K++ +N + + A PGF+K+ Y+ ++ +A S+IVI T
Sbjct: 176 AKYLYYNEIITTLSEFDGKILFAGPGFSKNNIQNYI------SEKHKDLA--SKIVIEST 227
Query: 246 SSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHER 305
+ + L E+L + + + E + ++E +++++ +S A YG V+ +
Sbjct: 228 NHTGRLGLSEILKSGIIDRIYGEARLSKESQIIEKLLEEISKKRL-ASYGLNSVKNSINY 286
Query: 306 MAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAI 365
AV+TLLITD+ R R ++VNSV++SGG + S+ H SG QL L G++A+
Sbjct: 287 SAVETLLITDEFLRR----NRSTVEEMVNSVENSGGKFVVISTEHDSGRQLKALGGISAL 342
Query: 366 LRFPL 370
LRFP+
Sbjct: 343 LRFPV 347
>sp|A3DMX7|PELO_STAMF Protein pelota homolog OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=pelA PE=3 SV=1
Length = 356
Score = 131 bits (329), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 171/371 (46%), Gaps = 22/371 (5%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M+I+ KDL G +K++P D DDLW YN++ D V A T R + S + R
Sbjct: 1 MKILEKDL---RKGYLKILPEDQDDLWALYNIIKPLDRVTATTSRDIKHGETSSSR---R 54
Query: 61 VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKI-GAFHSLEIELHRPFVLTKDVWDS 119
+ + L I+V+ L++ LRI G + E + G +H+L IE +P ++ K+ W
Sbjct: 55 IPMTLTIEVKTLEFQPFTERLRIRGIVVEGPERYGVKGHYHTLNIEPGKPLIIWKEKWSE 114
Query: 120 VALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYE 179
L+ + + + LA E A I L+ ++IP K P + ++
Sbjct: 115 NELEIISRFTSRKQKVLLATFDYDE--AAIALLTEQGIRLLEEFTSNIPGKREPVL--FQ 170
Query: 180 SALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSR 239
L K+ S+ L +++ V VIASPG + + R + + +P+
Sbjct: 171 KGLEKYLSSIAEKILDYINKFQVDIVVIASPGDLQKRVARII------KEKKPV-----N 219
Query: 240 IVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHV 299
I+ S G + +RE+L +V +KET + ++L EF LS +P YG V
Sbjct: 220 IITDTVSIGGQSGIRELLRRDSVREAVKETNIIKAQRILDEFHKNLSKNPDMVAYGIDDV 279
Query: 300 EVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQL 359
E A + AV LL++++L R ++ R++ ++N I G ++ L
Sbjct: 280 EYAVKYNAVDKLLVSEELLRIYDEEVRRRVSSILNEAYKRRAEIIIVPHNSDVGLEVEGL 339
Query: 360 TGVAAILRFPL 370
G+ A+LR+PL
Sbjct: 340 GGIVALLRYPL 350
>sp|Q8TZ98|PELO_METKA Protein pelota homolog OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=pelA PE=3 SV=1
Length = 353
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 179/378 (47%), Gaps = 34/378 (8%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKV-------VRQTKS 53
M++V KDL G ++++P DDLW Y++V GD V A+ R+V +R+ K
Sbjct: 1 MKVVEKDL---DKGYIEVLPETLDDLWHLYHVVRKGDLVFALERRRVKDERAETIRRDK- 56
Query: 54 GGKDAERVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLT 113
ER + L ++VE +++DK + LRI G ++E+ + G+ H++ + + +
Sbjct: 57 ----GERKPVYLGVRVEDVEFDKYANRLRIKG--VIEH-GPESGSHHTVNVTTGKRIKIV 109
Query: 114 KDVWDSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGP 173
KD W+ L+ + +A S L V EG I +V +R+ ++P K G
Sbjct: 110 KDEWERKDLERIEEAEMSRPPVMLVAVDTGEG--TIGIVRDYGLDVVARVRHNVPGKRG- 166
Query: 174 AVARYESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPI 233
+ + KFF + + + V V+ PGF K F +L E R I
Sbjct: 167 --GDRRAEMRKFFHRLADEIERIAEEEGVEHIVVGGPGFVKSDFAEFLREE------RDI 218
Query: 234 IANKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRAC 293
A+ + T S + L E++ V ++E++ A+EVK L+E F + +
Sbjct: 219 PAH-----VEDTGSAGEAGLIEMIRRGAVERAVEESRVAEEVKHLEEVFKRIGKGDDKVA 273
Query: 294 YGPKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSG 353
YG + A E A+ LL+ D+ FR + + ++ V + +G I S+ H G
Sbjct: 274 YGVRECLKAAEFGAIDVLLVADEKFREAMVEGEEDVLNAVKYAERTGAEVLIVSTEHEWG 333
Query: 354 EQLGQLTGVAAILRFPLP 371
E+L +L G+AA+LRF +P
Sbjct: 334 ERLRELGGIAALLRFSIP 351
>sp|O59148|PELO_PYRHO Protein pelota homolog OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=pelA
PE=3 SV=1
Length = 356
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 180/364 (49%), Gaps = 26/364 (7%)
Query: 14 GSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKS-GGKDAERVKLKLEIKVEAL 72
G VK+ DDLW Y+++ GD V A T+RK +++ S + E + + L +KVE +
Sbjct: 11 GKVKIKVETLDDLWHLYHIITPGDVVYAKTLRKQSQRSDSLRPEKVEVIPVFLGVKVEKI 70
Query: 73 DYDKEGSALRISGKNILEN-EHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDS 131
++ K + LR++G I + E V +G +H++ +E L K+ W ++ L +A ++
Sbjct: 71 NFHKFANQLRVTGPIIYASREDVPLGKYHTIAVEPGTIITLQKERWKPYYIERLKEAVEA 130
Query: 132 AATADLAVVLMQEGLANIFLVGRSMTITRSR-IETSIPRKHGPAVARY----ESALNKFF 186
+ A + +V +++G A M I R ++ +H RY E KFF
Sbjct: 131 SKRAKVMIVTIEDGEA-------EMAIVREYGLDFIATIRHNLGGKRYNIKREDEERKFF 183
Query: 187 DSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTS 246
V + ++ A++A PGF K+ F+++L + P +A S+IV+ TS
Sbjct: 184 HDVAKTMKDVMSRENIQRAIVAGPGFYKEDFYKFL------KENYPDLA--SKIVLDDTS 235
Query: 247 SGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERM 306
G + + EV+ V + E++ A E+K++++ ++ D YG K VE A
Sbjct: 236 MGGRVGIYEVIKRGTVDKVYSESRIANEIKLVEKVIERIAKDEP-VAYGMKEVEEAVNYG 294
Query: 307 AVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAIL 366
AV+ LL+ D+L + R+K +L+ + + SS H GE+L L G+A IL
Sbjct: 295 AVEILLVLDELLKG---DNREKVEELMELARSLRSKVVVVSSEHEGGEKLKALGGIAGIL 351
Query: 367 RFPL 370
RF +
Sbjct: 352 RFKI 355
>sp|A6UUY1|PELO_META3 Protein pelota homolog OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=pelA PE=3 SV=1
Length = 348
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 187/375 (49%), Gaps = 33/375 (8%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVV-RQTKSGGKDAE 59
M+I+++ IP +K++P + DDLW N++ ++V A+T R+ + K
Sbjct: 1 MKIIKE--IPE-KNIIKVMPENLDDLWHLSNIILKNNAVSAMTERRTEDKGDKLRADRGT 57
Query: 60 RVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDS 119
+ ++ L +K E + +D+ + LR+SG I E V IG++H+++IE + + K+ W
Sbjct: 58 KRRVYLGVKAEKIKFDENTNRLRVSGPIIHGPEDVPIGSYHTIDIEPLKDVSIQKN-WKK 116
Query: 120 VALDTLHQASDSAATADLAVVLMQEGLANIFLVG----RSMTITRSRIETSIPRKHGPAV 175
L L A +SA + VV+M + A +F++ + + +SR+ + K
Sbjct: 117 WDLQRLKDAENSAKKPKIIVVIMDDSDATVFIIRDYGVKEIGHIKSRLSKKLDYK----- 171
Query: 176 ARYESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIA 235
R + +++ +L + ++A PGFTK+ F +YL E + L+
Sbjct: 172 -RQDQENINYYNEILEVMSPYEG-----KILVAGPGFTKNNFQKYLS-EKHKDMLQ---- 220
Query: 236 NKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYG 295
R+V T+ + L EVL + V + E + ++E +++ + +S A YG
Sbjct: 221 ---RVVFESTNHTGRLGLAEVLKSGIVDRIYGEARLSKETQLVNKLLEEISKKGL-AVYG 276
Query: 296 PKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQ 355
V+ A A++TLLITD+ R R+ DL+NSV+ GG++ I S+ + G+Q
Sbjct: 277 VDDVKNALNYSAIETLLITDEFLR----KNRRILEDLINSVEAIGGSSIIISTEYDVGKQ 332
Query: 356 LGQLTGVAAILRFPL 370
L L G+ +LRFP+
Sbjct: 333 LKALGGIGGLLRFPI 347
>sp|A6VI74|PELO_METM7 Protein pelota homolog OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=pelA PE=3 SV=1
Length = 348
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 180/356 (50%), Gaps = 22/356 (6%)
Query: 16 VKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVV-RQTKSGGKDAERVKLKLEIKVEALDY 74
+K+IP + DDLW N++ +++ AVT R+ + K + K+ L IK E +++
Sbjct: 13 IKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRKVFLGIKAEKINF 72
Query: 75 DKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDSAAT 134
++ + LR+SGK I E + IG++H+++IE + K+ W L L A DS+
Sbjct: 73 HEDFNRLRVSGKIIHAPEDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDAEDSSKK 131
Query: 135 ADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYESALNKFFDSVLHAFL 194
+ VV+M + A+IFLV + I++ + +K + E A ++ ++++ +
Sbjct: 132 PKVVVVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSDIINS-I 188
Query: 195 KHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSSGYKHSLR 254
+ ++ A PGF K+ Y+ + L P +V+ + K L
Sbjct: 189 SEFEGKIL----FAGPGFGKNNIQNYI--SEKHKDLAP------NVVVESANHTGKSGLS 236
Query: 255 EVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMAVQTLLIT 314
E+L + + + E + ++E +++++ +S A YG + V A A+ TLL+T
Sbjct: 237 EILKSGIIDKIYGEARISKETQIIEKLLEEISKKGL-AAYGIESVNNAMNYSAIDTLLLT 295
Query: 315 DDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILRFPL 370
D+ R R+ +L+NSV++ G+ I S+ H +G+QL L G++A+LRFP+
Sbjct: 296 DEYLRR----NRRTIEELMNSVENINGSILIISTEHDAGKQLKALGGISALLRFPI 347
>sp|Q5V3G6|PELO_HALMA Protein pelota homolog OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=pelA PE=3 SV=1
Length = 355
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 182/379 (48%), Gaps = 34/379 (8%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKS-GGKDAE 59
M+I ++ G ++++P DDLW ++ GD V T R++ R + K E
Sbjct: 1 MQIQSQETTAEGAERIEVVPETLDDLWHLSYVIEPGDLVSGDTTRRIQRNDDNLRDKGGE 60
Query: 60 RVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDS 119
R + ++I+V +++ K + LR+ G+ + + ++G H+L +E H + K +
Sbjct: 61 REPMWIQIEVTDVEFAKFANRLRVGGEIVDCSREDQLGFHHTLNVEEHTELTVEKHLKPD 120
Query: 120 VALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYE 179
A D L +A ++ D+A+ ++EG A++ V + T R+ I ++ + Y
Sbjct: 121 QA-DRLEEAVEATENPDVAIATVEEGEAHVHTVAQYGTEERATITSTTGK------GEYA 173
Query: 180 SALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTK----DQFHRYLLLEAERTQLRPIIA 235
+ FD L + LK D V ++A PGFTK D F + P IA
Sbjct: 174 RPRKELFDE-LASVLKRQD---VDAYILAGPGFTKQDALDHFQDEI----------PDIA 219
Query: 236 NKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYG 295
+ I +V TS+ + EVL V ++ ++T+ A+E + E + + + YG
Sbjct: 220 EQ--ITVVDTSAVGDRGVHEVLKRGAVEDVQQQTRIAEEADYIDELMARIGS-GSEVAYG 276
Query: 296 PKHVEVAHERMAVQTLLITDDLFRNFEIATRKKY---VD-LVNSVKDSGGTAHIFSSMHF 351
P+ V A + A++TLL+ D+ R E A + VD ++ + + GG +FS+
Sbjct: 277 PEEVAKAADYGAIETLLVLDERLR-LERAGEGDWDIDVDQIIETTEQKGGDVTVFSAEFA 335
Query: 352 SGEQLGQLTGVAAILRFPL 370
G+QL L GVAA+LR+ L
Sbjct: 336 PGQQLSNLGGVAALLRYRL 354
>sp|A9A8K6|PELO_METM6 Protein pelota homolog OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=pelA PE=3 SV=1
Length = 348
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 178/356 (50%), Gaps = 22/356 (6%)
Query: 16 VKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVV-RQTKSGGKDAERVKLKLEIKVEALDY 74
+K+IP + DDLW N++ +++ AVT R+ + K + ++ L IK E +++
Sbjct: 13 IKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINF 72
Query: 75 DKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDSAAT 134
++ + LR+SGK I + + IG++H+++IE + K+ W L L A DS+
Sbjct: 73 HEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDAEDSSKK 131
Query: 135 ADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYESALNKFFDSVLHAFL 194
+ VV+M + A+IFLV + I++ I +K + E A ++ ++++
Sbjct: 132 PKVVVVIMDDSEADIFLVREFGIKELASIKSGISKKLD--YKQNEQAKFSYYSDIINSIS 189
Query: 195 KHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSSGYKHSLR 254
++ + A PGF K+ Y+ + L P +VI + K L
Sbjct: 190 EYEG-----KILFAGPGFGKNNIQNYI--SEKHKDLAP------NVVIESANHTGKSGLS 236
Query: 255 EVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMAVQTLLIT 314
E+L + + + E + ++E +++++ +S A YG + V A A+ TLL+T
Sbjct: 237 EILKSGIIDKIYGEARISKETQIIEKLLEEISKKGL-AAYGIESVSNAMNYSAIDTLLLT 295
Query: 315 DDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILRFPL 370
D+ R R+ +L+N+V++ G I S+ H +G+QL L G++A+LRFP+
Sbjct: 296 DEYLRR----NRRTIEELMNNVENINGNILIISTEHDAGKQLKALGGISALLRFPI 347
>sp|Q3INN9|PELO_NATPD Protein pelota homolog OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=pelA PE=3 SV=1
Length = 355
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 178/378 (47%), Gaps = 32/378 (8%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTK----SGGK 56
MRIV ++ + ++P DDLW ++ GD V T R++ R +GG
Sbjct: 1 MRIVDRESAEGRRERITLVPETLDDLWHLTYVLEPGDLVAGDTTRRIQRDDDKMRDTGG- 59
Query: 57 DAERVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDV 116
ER + + I V +++ K + LR+ G + + ++G H+ +E H + K V
Sbjct: 60 --EREPMWIRIDVNNVEFAKFANRLRVGGDIVDCSREDQLGFHHTFNVEEHDELTVEK-V 116
Query: 117 WDSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVA 176
W L+ L +A ++A D+A+ ++EG A+I V + R+ I + +
Sbjct: 117 WQVDQLERLEEAVEAAEQPDVAIATVEEGQAHIHTVAQYGVEERASITGTTGK------G 170
Query: 177 RYESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIAN 236
Y + ++ F+ L A L+ +D + ++A PGFTK ++ A P A
Sbjct: 171 EYARSRDELFEE-LAAILRRLDAEAI---ILAGPGFTKQDALEHIEDNA------PEAAE 220
Query: 237 KSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGP 296
K I +V T+S + EVL V + ET+ ++E +++ E + + +A YG
Sbjct: 221 K--IQVVDTASVGDRGVHEVLKRGAVDRIQTETRVSKEAELIDELMERIG-EGEKAAYGV 277
Query: 297 KHVEVAHERMAVQTLLITDDLFRNFEIATRKKYV----DLVNSVKDSGGTAHIFSSMHFS 352
V A E A++TLLI D+ R E A + D++ +V+ GG +FS
Sbjct: 278 DEVAEAAEFGAIETLLILDERLRE-ERAGEGDWAVDVNDIIENVEQQGGEVVVFSHEFDP 336
Query: 353 GEQLGQLTGVAAILRFPL 370
G+QL L G+AA+LR+ L
Sbjct: 337 GQQLANLGGIAALLRYRL 354
>sp|Q9V0V3|PELO_PYRAB Protein pelota homolog OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pelA PE=3 SV=1
Length = 356
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 184/363 (50%), Gaps = 24/363 (6%)
Query: 14 GSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKS-GGKDAERVKLKLEIKVEAL 72
G VK+ DDLW Y++++ GD V A T+RK +++ S + E + + L ++ E +
Sbjct: 11 GKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGVRAEKI 70
Query: 73 DYDKEGSALRISGKNILEN-EHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDS 131
+ + + LR++G + + + V +G +H++ +E + K+ W S ++ + +A ++
Sbjct: 71 NLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEAVEA 130
Query: 132 AATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARY----ESALNKFFD 187
+ A + +V M++G A + +V R + SI +H RY E KFF
Sbjct: 131 SKRAKVMIVAMEDGEAEVAIV-REYGLD---FIASI--RHNIGGKRYNVKREDEEKKFFH 184
Query: 188 SVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSS 247
V ++ V+ ++A PGF K+ F+ +L + P +A K +V+ TS
Sbjct: 185 DVAKTIKDLIERENVQKVIVAGPGFYKENFYGFL------RENYPELAGK--VVLDDTSM 236
Query: 248 GYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMA 307
G + + EV+ V + ET+ AQE+K++++ ++ D YG K VE A A
Sbjct: 237 GGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEP-VAYGLKDVEEAVNYGA 295
Query: 308 VQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILR 367
V TLL+ D+L + + R++ +++ ++ + SS H G++L L G+AAILR
Sbjct: 296 VDTLLVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILR 352
Query: 368 FPL 370
F +
Sbjct: 353 FKI 355
>sp|B9LQI7|PELO_HALLT Protein pelota homolog OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pelA PE=3 SV=1
Length = 355
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 179/376 (47%), Gaps = 28/376 (7%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVR---QTKSGGKD 57
MRI + G + ++P + DDLW +++ GD V T R++ R Q + G
Sbjct: 1 MRISDRGYGEEGRERLTLVPENVDDLWHLAHVLEPGDLVEGDTTRRIQRNDDQMRDTG-- 58
Query: 58 AERVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVW 117
+R L + ++V+ +++ + + LR+SG + + ++ A H++ +E H + K +
Sbjct: 59 GQREHLFVTLQVDEVEFARFANRLRVSGVIVGCSREDQLNAHHTINVEEHDEITVEKH-F 117
Query: 118 DSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVAR 177
+ L +A+++A D+A+ ++EG A + V + T + + P G
Sbjct: 118 KPDQTERLEEATEAAENPDVAIATVEEGAAYVHTVQQYGTEEYASF--TKPTGKGD---- 171
Query: 178 YESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANK 237
Y + F + A L H+D + V ++A PGFTK Y+ E R +
Sbjct: 172 YSRPREELFAELGEA-LAHLDADAV---ILAGPGFTKQDALDYITEE-----YRDL---A 219
Query: 238 SRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPK 297
RI V TS+ + EVL V + KET+ ++E ++ + ++ +A YGP+
Sbjct: 220 DRITTVDTSAAGDRGVHEVLKRGAVDEVQKETRISKEATLIDDLTAEIAQ-GAKATYGPE 278
Query: 298 HVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDL---VNSVKDSGGTAHIFSSMHFSGE 354
V A E A++TLL+ DD R +D+ + SV+ GG +FSS GE
Sbjct: 279 DVAEAAEFGAIETLLVVDDRLRTERQGEGDWSIDVNEVIESVEQQGGDVVVFSSEFAPGE 338
Query: 355 QLGQLTGVAAILRFPL 370
QL L G+AAILR+ L
Sbjct: 339 QLSNLGGIAAILRYRL 354
>sp|A4G0A4|PELO_METM5 Protein pelota homolog OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=pelA PE=3 SV=1
Length = 348
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 177/356 (49%), Gaps = 22/356 (6%)
Query: 16 VKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVV-RQTKSGGKDAERVKLKLEIKVEALDY 74
+K+IP + DDLW N++ +++ AVT R+ + K + ++ L IK E +++
Sbjct: 13 IKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINF 72
Query: 75 DKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDSAAT 134
++ + LR+SGK I + + IG++H+++IE + K+ W L L +A DS+
Sbjct: 73 HEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLVRLKEAEDSSKK 131
Query: 135 ADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYESALNKFFDSVLHAFL 194
+ VV++ + A+IFLV I++ + +K + E A ++ ++++
Sbjct: 132 PKVVVVILDDSEADIFLVREFGIKELVSIKSGVSKKLD--YKQNEQAKFSYYSDIINSIS 189
Query: 195 KHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSSGYKHSLR 254
+ + A PGF K+ Y+ + L P +V+ + K L
Sbjct: 190 EFEG-----KILFAGPGFGKNNIQNYI--SEKHKDLAP------NVVVESANHTGKSGLS 236
Query: 255 EVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMAVQTLLIT 314
E+L + + + E + ++E +V+++ +S A YG + V A A+ TLL+T
Sbjct: 237 EILKSGIIDKIYGEARISKETQVIEKLLEEISKKGL-AAYGIESVNNAMNYSAIDTLLLT 295
Query: 315 DDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILRFPL 370
D+ R R+ +L+NSV++ G I S+ H +G+QL L G++A+LRFP+
Sbjct: 296 DEYLRR----NRRNIEELMNSVENINGNVLIISTEHDAGKQLKALGGISALLRFPI 347
>sp|Q6M133|PELO_METMP Protein pelota homolog OS=Methanococcus maripaludis (strain S2 /
LL) GN=pelA PE=3 SV=1
Length = 348
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 182/358 (50%), Gaps = 26/358 (7%)
Query: 16 VKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVV-RQTKSGGKDAERVKLKLEIKVEALDY 74
+K+IP + DDLW +++ +++ AVT R+ + K + ++ L IK E +++
Sbjct: 13 IKLIPENLDDLWHLSHIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINF 72
Query: 75 DKEGSALRISGKNILENEHVKIGAFHSLEIELHRPF--VLTKDVWDSVALDTLHQASDSA 132
++ + LR+SGK I + + IG++H+++IE PF V + W ++ L +A DS+
Sbjct: 73 HEDFNRLRVSGKIIHAPDDIPIGSYHTIDIE---PFLQVSVQKNWKKWDIERLKEAEDSS 129
Query: 133 ATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYESALNKFFDSVLHA 192
+ VV+M + A+IFLV + I++ + +K + E A ++ ++++
Sbjct: 130 KKPKVVVVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSDIINS 187
Query: 193 FLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSSGYKHS 252
+ + ++ A PGF ++ Y+ + L P +V+ + K
Sbjct: 188 -ISEFEGKIL----FAGPGFGRNNIQNYI--SEKYKSLAP------NVVVESANHTGKSG 234
Query: 253 LREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMAVQTLL 312
L E+L + + + E + ++E +V+++ +S A YG + V A A+ TLL
Sbjct: 235 LSEILKSGIIDKIYGEARISKETQVVEKLLEEISKKGL-AAYGIESVNNAMNFSAIDTLL 293
Query: 313 ITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILRFPL 370
+TD+ R R+ +L+NSV++ G I S+ H +G+QL L G++A+LRFP+
Sbjct: 294 LTDEYLRR----NRRSVENLMNSVENINGNIIIVSTEHDAGKQLKALGGISALLRFPI 347
>sp|Q8U150|PELO_PYRFU Protein pelota homolog OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=pelA PE=3 SV=1
Length = 356
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 182/366 (49%), Gaps = 30/366 (8%)
Query: 14 GSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKS-GGKDAERVKLKLEIKVEAL 72
G +K+ DDLW Y++++ GD V A T+RK +++ S + E V + L IK E +
Sbjct: 11 GKIKIKAETLDDLWHLYHIISEGDVVYAKTLRKQAQRSDSLRPEKVEAVPVFLGIKAEKI 70
Query: 73 DYDKEGSALRISGKNILEN-EHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDS 131
+ + + LRI+G I + E V +G +H+L +E + K+ W + ++ L +A +S
Sbjct: 71 NLHRFANQLRITGPIIYASREDVPLGRYHTLTVEPGTVITIQKEKWKNYHIERLKEAIES 130
Query: 132 AATADLAVVLMQEGLANIFLVGR-------SMTITRSRIETSIPRKHGPAVARYESALNK 184
+ A + +V +++G A I +V S+T S +I R + K
Sbjct: 131 SKKARVMIVAIEDGEAEIAIVREYGLDFVGSITYNISGKRYNIKR---------DDEEKK 181
Query: 185 FFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVH 244
FF V + + + + A++A PGF K+ F +L + P +A K +V
Sbjct: 182 FFHEVAKSMEELMKRENIEKAIVAGPGFYKENFVNFL------RENYPELAKK--VVTDD 233
Query: 245 TSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHE 304
TS G + + EV+ V + E++ ++E+K++++ ++ + YG K VE A
Sbjct: 234 TSMGGRTGIYEVIKRGTVDKVYTESRISKEIKLVEKVIEEIAKNGL-VAYGLKEVEEATN 292
Query: 305 RMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAA 364
AV+TL++ D L + R+K +L+ ++ + + SS H G++L L G+AA
Sbjct: 293 YGAVETLIVLDSLLKG---ELREKIEELMELARNLRASVVVVSSEHEGGDKLKALGGIAA 349
Query: 365 ILRFPL 370
+LRF +
Sbjct: 350 LLRFKI 355
>sp|A5UKW7|PELO_METS3 Protein pelota homolog OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=pelA PE=3 SV=1
Length = 353
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 179/373 (47%), Gaps = 24/373 (6%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAER 60
M+IV++D G V ++P DDLW ++V GDSV + T R++ T +
Sbjct: 1 MKIVKQD---KKEGIVTLVPETLDDLWHLSHIVEVGDSVSSKTTRRIQDNTGDKLRSDRG 57
Query: 61 VK--LKLEIKVEALDYDKEGSALRISGKNILENEH-VKIGAFHSLEIELHRPFVLTKDVW 117
VK L I VE + + LR++G E + +G+ H++E++L+ P + K+ W
Sbjct: 58 VKKTFTLRIDVENITFHIFTGKLRLTGVITKGPEDLIPLGSHHTVEVKLNTPITIKKEKW 117
Query: 118 DSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVAR 177
+ AL L+QA +++ +VL+++ A + L+ + I+ S+ K R
Sbjct: 118 ANWALKRLNQAIEASKKLAAIIVLLEDDTATLGLMRQFGIEYYGPIKGSVSGKRIVDKNR 177
Query: 178 YESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANK 237
A+ +F++ V+ + K F+ ++ V+A PGF K+ F+ Y+ +A+K
Sbjct: 178 -SKAIAQFYEKVIESVNK---FHDIQNIVVAGPGFVKNDFYDYI------KNKHKDLADK 227
Query: 238 SRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPK 297
+ +I T SG + + EVL V L E + A E+ + + + ++ YG K
Sbjct: 228 A--IIESTGSGGRVGIHEVLKKGTVEKLTVENRVASEMVAINNLLEEIGKNSSKVAYGEK 285
Query: 298 HVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLG 357
A AV+ LL+ D ++ +L++ V++ G + SS H GEQL
Sbjct: 286 ETVKAINLGAVKQLLVLDSAVAINDMG------NLMDMVENMNGEVMVISSQHEGGEQLK 339
Query: 358 QLTGVAAILRFPL 370
L +AAILR+ +
Sbjct: 340 GLGSMAAILRYEI 352
>sp|Q46C69|PELO_METBF Protein pelota homolog OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pelA PE=3 SV=1
Length = 350
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 184/375 (49%), Gaps = 32/375 (8%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQT-KSGGKDAE 59
MR+ + L G + + DDLW ++ GD V +VT RK + K + E
Sbjct: 1 MRVTNRSL-KGREGEIAVTAETLDDLWHLKYIIEKGDLVFSVTKRKADSASDKIRPEKVE 59
Query: 60 RVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDS 119
+VK++L I+V+ L++ K + LR+ G + + +G++H+L IE+ + K+ W +
Sbjct: 60 KVKVRLGIRVDDLEFHKFANRLRLHG---MIERGMDVGSYHTLNIEIGTNLSVIKEHWKN 116
Query: 120 VALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYE 179
L + A +++ + +V ++EG A+I V S I S ++ E
Sbjct: 117 DQLQRIKDAEEASKRPKVVMVAIEEGDADIGFVHHYGIEIYSHIRQSSGKR--------E 168
Query: 180 SAL-NKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKS 238
+ L N+FF V+ V VIA PGFTK+ F +Y + P +A+K+
Sbjct: 169 TGLRNEFFREVVEQLRHAVPEEA--SIVIAGPGFTKEDFIKYF------QETEPAMASKA 220
Query: 239 RIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKH 298
+I TS +EVL V +++E++ A+E ++++ +S D +A YG
Sbjct: 221 --LIEDTSMIGMSGFQEVLRRGAVDRIMQESRIARESALMEDLIREISMDG-KAAYGLGD 277
Query: 299 VEVAHERMAVQTLLITDDLFRNFEIATRKKYVD---LVNSVKDSGGTAHIFSSMHFSGEQ 355
V+ A AV+TLL+ D+ R R+K D L+ V+ + G +FS+ GE+
Sbjct: 278 VKNALNFGAVETLLVADETLRE----GREKGEDIDKLLREVEQAQGKVVVFSTAFEPGEK 333
Query: 356 LGQLTGVAAILRFPL 370
L +L G+AA+LRF +
Sbjct: 334 LHKLGGIAALLRFKV 348
>sp|Q8TSZ1|PELO_METAC Protein pelota homolog OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=pelA PE=3 SV=1
Length = 350
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 32/375 (8%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQT-KSGGKDAE 59
MR+ + L G + + DDLW ++ GD V A+T RK + K + E
Sbjct: 1 MRVTNRSL-RGREGEIAITAETLDDLWHLKYIIEKGDLVFALTKRKADSASDKLRPEKVE 59
Query: 60 RVKLKLEIKVEALDYDKEGSALRISGKNILENEH-VKIGAFHSLEIELHRPFVLTKDVWD 118
+VK++L I+VE +++ K + LRI G EH + +G++H+L +E+ + K+ W
Sbjct: 60 KVKVRLGIRVEEMEFHKFANRLRIHGPI----EHGMDVGSYHTLNVEIGTNISIIKERWK 115
Query: 119 SVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARY 178
+ L + A ++ + +V ++EG A+I V S I S ++ + +
Sbjct: 116 NDQLQRIQDAEEAGKRPKVVIVAVEEGDADIGFVRHYGIEVYSHIRQSSGKRENGLRSEF 175
Query: 179 ESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKS 238
+ D + HA + VIA PGFTK+ F +Y + P +A+K+
Sbjct: 176 ---FREIVDQLRHAVPEDASI------VIAGPGFTKEDFLKYF------HETEPEMASKA 220
Query: 239 RIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKH 298
+ TS +EVL V +++E++ A+E ++++ +S D +A YG
Sbjct: 221 --LTEDTSMIGMSGFQEVLRRGAVDRIMQESRIARESSLMEDLLREISMD-GKAAYGFAD 277
Query: 299 VEVAHERMAVQTLLITDDLFRNFEIATRKKYVDL---VNSVKDSGGTAHIFSSMHFSGEQ 355
V+ A + AV+TLLI D+ R R+K D+ + V+ + G +FS+ GE+
Sbjct: 278 VKNALKYGAVETLLIADETLRE----GREKGEDIDKVLMEVEQAQGKVVVFSTAFEPGEK 333
Query: 356 LGQLTGVAAILRFPL 370
L +L GVAA+LRF +
Sbjct: 334 LHKLGGVAALLRFKV 348
>sp|Q12W71|PELO_METBU Protein pelota homolog OS=Methanococcoides burtonii (strain DSM
6242) GN=pelA PE=3 SV=1
Length = 347
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 183/372 (49%), Gaps = 27/372 (7%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQT-KSGGKDAE 59
MR+ ++DL N G + + P DDLW ++ GD V ++T RK K + AE
Sbjct: 1 MRVTKRDLKHNREGEISLTPETLDDLWHLKYIIEKGDLVFSLTKRKADNAADKLRPEKAE 60
Query: 60 RVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDS 119
+ ++L ++VE +++ K + LR+ G L + G +H+L IE +TK W
Sbjct: 61 KKTVRLGVRVEDVEFHKFSNRLRVHG---LIEHGMDAGFYHTLNIEDGTNLSITK-YWKK 116
Query: 120 VALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYE 179
L+ +++A ++ + +V ++EG A+I V R I I + I + G E
Sbjct: 117 DQLERVNEAEAASKRPKVILVAIEEGDADIGFV-RHYGI---EIYSHITQSSGKG----E 168
Query: 180 SALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSR 239
L + F S + L H + V++ PGFTKD F +Y ++ ++A
Sbjct: 169 GTLREVFFSTILDQLTHA-MSGTESVVVSGPGFTKDDFMKYA-----SSKNSDLVAG--- 219
Query: 240 IVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHV 299
I++ TSS +EVL V +++E++ A+E ++ ++ D + YG V
Sbjct: 220 ILVEDTSSIGMSGFQEVLRRGAVDRIMEESRIARESSLMDSLLKEIALDG-KVAYGMDEV 278
Query: 300 EVAHERMAVQTLLITDDLFRNFEIATRKKYVD-LVNSVKDSGGTAHIFSSMHFSGEQLGQ 358
+ A + AV+TLL+ D++ R + +D L+ +V+ S G +FS+ G++L
Sbjct: 279 KQAIDFGAVETLLVADEMLR---LERESGNIDGLIQNVERSQGKMVVFSTEFEPGQRLHS 335
Query: 359 LTGVAAILRFPL 370
L G+AAILRF +
Sbjct: 336 LGGIAAILRFKV 347
>sp|Q8PVZ0|PELO_METMA Protein pelota homolog OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=pelA
PE=3 SV=1
Length = 350
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 182/376 (48%), Gaps = 34/376 (9%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQT-KSGGKDAE 59
MR+ + L G + + DDLW ++ GD V A+T RK + K + E
Sbjct: 1 MRVTNRSL-KGREGEIAVTAETLDDLWHLKYIIEKGDMVFALTRRKADSASDKLRPEKVE 59
Query: 60 RVKLKLEIKVEALDYDKEGSALRISGKNILENEH-VKIGAFHSLEIELHRPFVLTKDVWD 118
+VK++L I+VE L++ K + LRI G EH + G++H+L +E+ + K+ W
Sbjct: 60 KVKVRLGIRVEELEFHKFANRLRIHGPI----EHGMDTGSYHTLNVEIGTNISIIKEHWK 115
Query: 119 SVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARY 178
+ L + A ++ + +V ++EG A+I V S I S ++
Sbjct: 116 NDQLQRIQDAEEAGKRPKVVIVAVEEGDADIGFVRHYGIEVYSHIRQSSGKR-------- 167
Query: 179 ESAL-NKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANK 237
E+ L N+FF ++ V + VIA PGFTK+ F +Y + + +
Sbjct: 168 ETGLRNEFFREIVEQLRHAVPEDA--SIVIAGPGFTKEDFLKYFNETESEMASKALTEDT 225
Query: 238 SRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPK 297
S I + SG++ EVL V +++E++ A+E ++++ +S D +A YG
Sbjct: 226 SMIGM----SGFQ----EVLRRGAVDRIMQESRIARESSLMEDLIREISMDG-KAAYGFA 276
Query: 298 HVEVAHERMAVQTLLITDDLFRNFEIATRKKYVD---LVNSVKDSGGTAHIFSSMHFSGE 354
V+ A AV+TLLI D+ R R+K D L+ V+ + G +FS+ GE
Sbjct: 277 DVKNALGYGAVETLLIADETLRE----GREKGEDIDKLLMEVEQAQGKVVVFSTAFEPGE 332
Query: 355 QLGQLTGVAAILRFPL 370
+L +L G+AA+LRF +
Sbjct: 333 KLHKLGGIAALLRFKV 348
>sp|A7I7Y6|PELO_METB6 Protein pelota homolog OS=Methanoregula boonei (strain 6A8) GN=pelA
PE=3 SV=1
Length = 341
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 173/363 (47%), Gaps = 31/363 (8%)
Query: 9 IPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQT-KSGGKDAERVKLKLEI 67
I + G +++ P DDLW +LV+ GD V A T R V T K + E+ ++L +
Sbjct: 8 IKDNYGEIRLFPESIDDLWHLQHLVSPGDLVFATTFRSVEGATDKIRPEKVEKRPVRLGV 67
Query: 68 KVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQ 127
+VE +++ G LRISG I+E+ + GA+H++ +E + + W V L+ L +
Sbjct: 68 RVEKVEFSHHGVRLRISG--IIEH-GMDTGAYHTINVETGYEISVIRR-WRPVDLERLDR 123
Query: 128 ASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYESALNKFFD 187
A ++ + ++ ++EG A +F + + E+ I G FFD
Sbjct: 124 AVKASVYGVIHILTLEEGEAELF------RLRQYGPESVITITAGSGKGGETETRTGFFD 177
Query: 188 SVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSS 247
+V+ + + V VIA PGF K+ F RY A+ P R ++ T
Sbjct: 178 TVIKSIAE-----VSGPMVIAGPGFVKEDFVRY----AKNKNCAP----AGRAIVAETRR 224
Query: 248 GYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMA 307
+ ++++V+ A + LI + + ++EV+++ E +S D A YG K V A E A
Sbjct: 225 IGRGAVQDVIGAGTLEKLIGDLQLSREVRLMDEVLLRISRDGAIA-YGYKDVATAIEYGA 283
Query: 308 VQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILR 367
V +L+ D L R+ I V L+ S + + S+ GE+L L G+AA+LR
Sbjct: 284 VDEVLLADSLLRDRAI------VPLIESAERMQAKIIVLSTEFEPGERLAALGGIAALLR 337
Query: 368 FPL 370
+ +
Sbjct: 338 YKM 340
>sp|A0B6U3|PELO_METTP Protein pelota homolog OS=Methanosaeta thermophila (strain DSM 6194
/ PT) GN=pelA PE=3 SV=2
Length = 347
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 177/378 (46%), Gaps = 41/378 (10%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQT-KSGGKDAE 59
MR+++++L + G + ++ DDLW +LV+ GD V A T RK+ T K + AE
Sbjct: 1 MRVIKRNLRGD-EGEISLVAESLDDLWHLKHLVSPGDLVFATTQRKISGATDKLRPEKAE 59
Query: 60 RVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDS 119
R ++L I VEA+++ + LRI G + V IG++H+L IE + K W
Sbjct: 60 RRTVRLGISVEAVEFHTYSNWLRIHG---VIKSGVDIGSYHTLNIEAGSELSIIKR-WRP 115
Query: 120 VALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYE 179
L + +A + + + L++EG A I ++ + T + I
Sbjct: 116 DELQRIEEAVAESNRPRVVLALVEEGEATIGVLRQFGVQTVAEIRG-------------- 161
Query: 180 SALNKFFDSVLHAFLKHVDFNVVRCA------VIASPGFTKDQFHRYLLLEAERTQLRPI 233
+ SV FLK V + A V+A PGFTK+ + ++EA L
Sbjct: 162 GSGKGSGSSVRDDFLKEVADQIANSAGDDAYVVLAGPGFTKEDLRK--VMEARYPDL--- 216
Query: 234 IANKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRAC 293
R+ + SS + +EVL V +++ ++ ++E +++ + ++ D RA
Sbjct: 217 ---LKRLTMDDASSTGRSGFQEVLRRGTVDRIVEASRISRETRLMDDLMKEIATD-GRAA 272
Query: 294 YGPKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSG 353
YG + V A A++TL+I D L R ++ + L+ V G IFS+ G
Sbjct: 273 YGIREVREAANYGAIETLMIVDQLVRRGDVES------LIRDVAAGRGRVVIFSTEFEPG 326
Query: 354 EQLGQLTGVAAILRFPLP 371
E+L L GVAA+LRF +P
Sbjct: 327 ERLEALGGVAALLRFRIP 344
>sp|Q9HPR5|PELO_HALSA Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=pelA PE=3 SV=1
Length = 357
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 178/385 (46%), Gaps = 44/385 (11%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVR---QTKSGGKD 57
M++ + + G + ++P DDLW ++ GD V T R++ R Q + G
Sbjct: 1 MQLKDRHTVEGGRERITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTG-- 58
Query: 58 AERVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVW 117
ER + + I V +++ K + LR+SG + ++G H+L + + K W
Sbjct: 59 GEREHMFVTIDVGDVEFHKFSNRLRVSGTIEDCSREDQLGLHHTLNVAEREELEVEKH-W 117
Query: 118 DSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGR-------SMTITRSRIETSIPRK 170
L+ L++A ++ D+A+ ++EG A+I +V + S T T + E +
Sbjct: 118 QPDQLNRLNEAVEATDQPDVAIATVEEGEAHIHVVQQYGVDEQGSFTATTGKGEQN---- 173
Query: 171 HGPAVARYESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQL 230
+ ++ F ++ A + ++A PGFTK ++ T+
Sbjct: 174 --------DRGRDELFGTLADALARMQ----ADAIILAGPGFTKQDALDHI------TEE 215
Query: 231 RPIIANKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPT 290
P + + I +V TS+ + EVL V ++ +ET+ A+E +++ E ++ D
Sbjct: 216 YPDL--QETITMVDTSAVGGRGVHEVLKRGAVEDVQEETRIAEESELIDELTTQMATDG- 272
Query: 291 RACYGPKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVD-----LVNSVKDSGGTAHI 345
+A YG V+ A E AV+ LLI D+ R E A +VD LV +V+ GG+ +
Sbjct: 273 KAAYGIDEVQKAVEFGAVEDLLILDERLR-LERAGEGDWVDVDVNDLVRTVEQQGGSVTV 331
Query: 346 FSSMHFSGEQLGQLTGVAAILRFPL 370
FS GEQL L G+ A+LR+ L
Sbjct: 332 FSHEFAPGEQLRNLGGIGAVLRYRL 356
>sp|B0R5R9|PELO_HALS3 Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=pelA PE=3 SV=1
Length = 357
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 178/385 (46%), Gaps = 44/385 (11%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVR---QTKSGGKD 57
M++ + + G + ++P DDLW ++ GD V T R++ R Q + G
Sbjct: 1 MQLKDRHTVEGGRERITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTG-- 58
Query: 58 AERVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVW 117
ER + + I V +++ K + LR+SG + ++G H+L + + K W
Sbjct: 59 GEREHMFVTIDVGDVEFHKFSNRLRVSGTIEDCSREDQLGLHHTLNVAEREELEVEKH-W 117
Query: 118 DSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGR-------SMTITRSRIETSIPRK 170
L+ L++A ++ D+A+ ++EG A+I +V + S T T + E +
Sbjct: 118 QPDQLNRLNEAVEATDQPDVAIATVEEGEAHIHVVQQYGVDEQGSFTATTGKGEQN---- 173
Query: 171 HGPAVARYESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQL 230
+ ++ F ++ A + ++A PGFTK ++ T+
Sbjct: 174 --------DRGRDELFGTLADALARMQ----ADAIILAGPGFTKQDALDHI------TEE 215
Query: 231 RPIIANKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPT 290
P + + I +V TS+ + EVL V ++ +ET+ A+E +++ E ++ D
Sbjct: 216 YPDL--QETITMVDTSAVGGRGVHEVLKRGAVEDVQEETRIAEESELIDELTTQMATDG- 272
Query: 291 RACYGPKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVD-----LVNSVKDSGGTAHI 345
+A YG V+ A E AV+ LLI D+ R E A +VD LV +V+ GG+ +
Sbjct: 273 KAAYGIDEVQKAVEFGAVEDLLILDERLR-LERAGEGDWVDVDVNDLVRTVEQQGGSVTV 331
Query: 346 FSSMHFSGEQLGQLTGVAAILRFPL 370
FS GEQL L G+ A+LR+ L
Sbjct: 332 FSHEFAPGEQLRNLGGIGAVLRYRL 356
>sp|O29421|PELO_ARCFU Protein pelota homolog OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=pelA
PE=1 SV=1
Length = 344
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 38/373 (10%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGK---D 57
M+IV ++L N G +K+IP DDLW ++ GD V A T R ++S K D
Sbjct: 1 MQIVEENLRDN-EGEIKLIPETLDDLWHLRFIIEKGDVVFATT----KRASQSSDKLRSD 55
Query: 58 AERVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVW 117
E V ++L I+VE +++ + + LR+SGK + E +H+L I + + + K W
Sbjct: 56 KEMVTVRLGIEVEKVEFHRFANRLRVSGKIVAGIEE---SGYHTLNITVGKELSIIKK-W 111
Query: 118 DSVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVAR 177
L+ L +A + + ++ ++ ++EG A + + + +E + G
Sbjct: 112 KPEQLERLRRAVEDSNRPEIVMLTIEEGYAV------AGVLRQWGVEEIFEERMGYGKGM 165
Query: 178 YESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANK 237
+S +FF V A L+ DF + ++A PGF K+ F +L + P +A
Sbjct: 166 GDSR-KEFFGEV-AAKLESFDFKYL---IVAGPGFAKNDFLDFL------KERYPEMAKN 214
Query: 238 SRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPK 297
+ +V V + E+L V ++ E + A+E + + ++ R YG
Sbjct: 215 AVVVDVSSVG--SRGFIEILKRRVVDKIVGEVRLAEEAEYIDRLLEGIAKGE-RVAYGLD 271
Query: 298 HVEVAHERMAVQTLLITDDLFRNFEIATRKKY-VD-LVNSVKDSGGTAHIFSSMHFSGEQ 355
V AH A++ LL+ D+ F + R+K+ VD L+ V++SGG I S+ G++
Sbjct: 272 EVREAHNYRAIEVLLVADE----FLLEEREKWDVDGLLREVEESGGKVVIMSTEFEPGKR 327
Query: 356 LGQLTGVAAILRF 368
L L G+AA+LRF
Sbjct: 328 LMSLGGIAALLRF 340
>sp|Q9HJ74|PELO_THEAC Protein pelota homolog OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=pelA PE=1 SV=1
Length = 339
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 42/373 (11%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDS-DDLWFAYNLVNAGDSVLAVTVRKVVRQTK-SGGKDA 58
MRI+ +DL S I ++S DDLW+ N+++ GD V A+T R+V ++
Sbjct: 1 MRILEEDL----KNSTYRIRIESLDDLWYLRNILSEGDEVSAITFRRVEESADVQRSRER 56
Query: 59 ERVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWD 118
ER+ + + +KVE +++ + LRI G I E K G S+ + + +TK+ WD
Sbjct: 57 ERIPITIRLKVEKIEFQDFDNRLRILGTVIEGPEDTK-GKHQSITVTVDSEISITKE-WD 114
Query: 119 SVALDTLHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGP-AVAR 177
+D L +A+D V M E A IFL+ ++ T + G A
Sbjct: 115 DQHIDLLKEATDEKYVTVYTAVAMDEDEAQIFLI---HPYGIQQVGTVYSGRSGKYAEGN 171
Query: 178 YESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAER--TQLRPIIA 235
Y A +FD +++A LK N +I PGF +D+F RY A+R + A
Sbjct: 172 YSEA--SYFDQIVNA-LK----NYSNSIIILGPGFARDRFARYC---AQRGVNVIGSFPA 221
Query: 236 NKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYG 295
N+ T SG ++ E + +++ L+ + A++ +++ EF + D YG
Sbjct: 222 NR-------TDSG---AVYEFITSADGAKLLSNERIARDKEIVDEFLVAVKKDM--GVYG 269
Query: 296 PKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQ 355
E A + A+ L+ITD++FR ++ + + +V G HI S + G+
Sbjct: 270 RDQTESALQMGALSDLIITDEMFRT---EDGRRSLSIAQTV---GTRIHIVSVSNDPGQI 323
Query: 356 LGQLTGVAAILRF 368
+ + G A ILR+
Sbjct: 324 VKKFGGFAGILRY 336
>sp|Q18J81|PELO_HALWD Protein pelota homolog OS=Haloquadratum walsbyi (strain DSM 16790)
GN=pelA PE=3 SV=1
Length = 355
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 172/380 (45%), Gaps = 36/380 (9%)
Query: 1 MRIVRKDLIPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTK----SGGK 56
MRI + G ++P + DDLW +++ GD V T R++ R + +GG+
Sbjct: 1 MRIPSRGRGEEGKEQWTLVPENVDDLWHLSHVLEPGDRVGGDTTRRIQRNDENLRDTGGQ 60
Query: 57 DAERVKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDV 116
R L + I+V +++ + + LR+ G+ I + ++G +H+L +E H ++TK
Sbjct: 61 ---REHLVVTIEVADVEFARFANRLRVGGEIISCSREDELGHYHTLNVESHDEIIVTK-- 115
Query: 117 WDSVALDT---LHQASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGP 173
A D + A ++A AD+AV ++EG A+I V + T E R
Sbjct: 116 --KFAPDQRKRIEAAEEAAENADVAVATIEEGEAHIHTVAQYGT------EEQFSRTATT 167
Query: 174 AVARYESALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPI 233
Y + F + A L +D + + ++A PGFTK Y+ P
Sbjct: 168 GKGEYSQPRTELF-AEFAAALSRMDVDAI---ILAGPGFTKQDAEEYI------QSNNPE 217
Query: 234 IANKSRIVIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRAC 293
I +K + IV T++ + EVL V + +T+ + E +++ E ++ +
Sbjct: 218 IIDK--LTIVDTAAVGDRGVHEVLKRGAVDEVQTQTRISAEAELIDELMEGIAT-GEKIA 274
Query: 294 YGPKHVEVAHERMAVQTLLITDDLFRNFEIATRKKYVD---LVNSVKDSGGTAHIFSSMH 350
YG V A E AV LL+ DD R + D ++ +V+ GG+ + S
Sbjct: 275 YGIDEVAKAAEFGAVDDLLVVDDQLREERRDSGDWSTDVDTVLQNVEQQGGSVTVLSGEF 334
Query: 351 FSGEQLGQLTGVAAILRFPL 370
G++L L G+AA+LR+ L
Sbjct: 335 DPGQRLRNLGGIAALLRYRL 354
>sp|B8GIR5|PELO_METPE Protein pelota homolog OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=pelA PE=3 SV=1
Length = 340
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 169/368 (45%), Gaps = 41/368 (11%)
Query: 9 IPNGPGSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQT-KSGGKDAERVKLKLEI 67
I G G +++ P DD+W +L+ GD V A T R V T K + AE+ +++ I
Sbjct: 8 IRQGYGEIRLFPESVDDIWHLSHLIAPGDLVFAQTFRSVETATDKLRPEKAEKRPVRIGI 67
Query: 68 KVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQ 127
+VE +++ + S LR++G L +G++H+L +E + + + W + + +
Sbjct: 68 RVEKVEFHQYSSRLRVTG---LIESGPDVGSYHTLNLEPNFEVSVIR-FWSKSDRERVDR 123
Query: 128 ASDSAATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPA---VARYESALNK 184
A +S+ + + V+ ++EG A +F + R++GP S
Sbjct: 124 AVNSSGSGLVHVLAIEEGEAELFRI----------------RQYGPEQVLTITMGSGKGA 167
Query: 185 FFDSVLHAFLKHVD--FNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVI 242
DS F++ + +IA PGF KD F R+L P IA S ++
Sbjct: 168 PVDSREGFFIEAATPLLQITGPVIIAGPGFIKDDFARFL------KNRYPAIAANS--MV 219
Query: 243 VHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVA 302
V T + +++EV+ + + + + +EV+V+ E ++ + YG V A
Sbjct: 220 VETRRIGRGAVQEVIGQGVIGKIAGDLQLGREVQVMDEVLKRIAMEGL-ITYGRAEVGQA 278
Query: 303 HERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGV 362
A ++++D L R+ E+A + + +N+ T + SS GE+L L G+
Sbjct: 279 ISFGAADQVIVSDRLIRDPEVARLMEQAEQMNA------TVTVLSSCFEPGERLWALGGI 332
Query: 363 AAILRFPL 370
AA+LR+ L
Sbjct: 333 AALLRYAL 340
>sp|Q2FQH4|PELO_METHJ Protein pelota homolog OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=pelA PE=3 SV=1
Length = 341
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 47/366 (12%)
Query: 14 GSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVV-RQTKSGGKDAERVKLKLEIKVEAL 72
G +++ P +SDDLW +NL+ G V A T+R V Q K + E+ ++L I+VE +
Sbjct: 13 GEIRLFPENSDDLWHLHNLITPGSLVYATTLRSVEGSQDKIRPEKQEKRPVRLGIRVEDV 72
Query: 73 DYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDSA 132
++ + LR+ G +E+ V IG+ H+L +E + K W L+ + +A +
Sbjct: 73 EFHEYSIRLRVFG--TIES-GVDIGSHHTLNLEPGYEISVIKS-WSGSDLERIDRAIKGS 128
Query: 133 ATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRK-----HGPAVARYESALNKFFD 187
+ + ++ ++EG A ++ R+++ P++ G S+ +F +
Sbjct: 129 TSEAIHILTVEEGEAELY-----------RVQSYGPKQVWSLAAGSGKTAEVSSREEFSE 177
Query: 188 SVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSR---IVIVH 244
+V+ + + VIA PGF K++ ++ + +R N SR +VI
Sbjct: 178 AVVSQVSQ-----LTGPLVIAGPGFVKEE----IIAKFKRK-------NPSRSAPLVIGD 221
Query: 245 TSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHE 304
T +G + +++EV+ + L + + A+EV L E + D A YG V A
Sbjct: 222 TRAGGRRAVQEVIGQGILEKLNGDLQLAREVTCLDELMRRIGKDEPVA-YGIDAVRDATG 280
Query: 305 RMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAA 364
AVQTL++ D L R+ + A DL+ + IFSS GE+L L G+AA
Sbjct: 281 CGAVQTLMVVDTLLRDPDAA------DLIRQAEAMRSEVVIFSSRFEPGERLAGLGGIAA 334
Query: 365 ILRFPL 370
+LR+ +
Sbjct: 335 LLRYSI 340
>sp|A3CU20|PELO_METMJ Protein pelota homolog OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=pelA PE=3 SV=1
Length = 341
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 170/363 (46%), Gaps = 41/363 (11%)
Query: 14 GSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQT-KSGGKDAERVKLKLEIKVEAL 72
G +++ P DDLW +LV GD V A T R V T K + E+ ++L I VE +
Sbjct: 13 GEIRLFPETLDDLWHLSHLVGPGDLVFATTFRSVEAATDKLRPEKVEKRPVRLGIWVEKV 72
Query: 73 DYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDSA 132
++ + + LRI+G I+E+ V + A H+L +E + K W V + + +A D++
Sbjct: 73 EFHQHTNRLRIAG--IIES-GVDVAAHHTLNVEAGFEISVVKR-WRPVDCERIRRAVDAS 128
Query: 133 ATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPA-VARYESALNKFFDSVLH 191
A + VV ++EG A I+ + R+ GP V + +K D+
Sbjct: 129 AYGVVHVVSVEEGEAQIYRL----------------RQFGPEWVTTVTAGSSKGADTGTR 172
Query: 192 AFLKHVDFNVVRCA----VIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSS 247
+ L + V V+A PGF KD+F Y+ + A P +A R+V V T
Sbjct: 173 SALFEKTLDTVAAVTGPLVVAGPGFVKDEFAEYVKVRA------PDLAG--RMVAVETRR 224
Query: 248 GYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMA 307
+ +++EV+ + L+ + A+EV ++ E ++ + A YG V A A
Sbjct: 225 IGRGAVQEVIGQGILDRLLGDLHLAREVALMDEVLVRIATEGAVA-YGIDEVRKAVAYGA 283
Query: 308 VQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILR 367
+T+L+ D L R+ E + + VN+ T + S+ GE+L + G AA+LR
Sbjct: 284 AETVLVADTLLRDDEATGVIEQAERVNA------TVVVLSTEFEPGERLDAIGGAAALLR 337
Query: 368 FPL 370
+ +
Sbjct: 338 YKI 340
>sp|Q4JCI0|PELO_SULAC Protein pelota homolog OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=pelA PE=3 SV=1
Length = 342
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 165/357 (46%), Gaps = 30/357 (8%)
Query: 14 GSVKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAERVKLKLEIKVEALD 73
GS+K+ + DDLW + ++ GD ++A T R + S GKD+ R+ + +E++VE +
Sbjct: 11 GSLKLHVENEDDLWLLHIIIKKGDRIVAKTTRDI-----SMGKDSRRIPMTIELQVEYTE 65
Query: 74 YDKEGSALRISGKNILENEHVKI-GAFHSLEIELHRPFVLTKDVWDSVALDTLHQASDSA 132
+ + LRI G + E I GA H++ +++ ++ K+ W + L+ + + +
Sbjct: 66 FQNFTTRLRIHGLILDAPERFGIKGAHHTVNLDIGDEVIIIKEQWSNYELEKIREQEEKK 125
Query: 133 ATADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYESALNKFFDSVLHA 192
+A+V + E + + + + ++T P K V N+ + + +
Sbjct: 126 GKLLIALVDVDEYIIALLMKQGVKILAEKSLQT--PGKDNDVV-------NENIEEMANE 176
Query: 193 FLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSSGYKHS 252
+ V V +IA PG KD ++ + I NK + + SS +
Sbjct: 177 IISFVKLTGVNVIIIAGPGPFKDMVNQKI----------KQIDNKLIVYVDSVSSASRAG 226
Query: 253 LREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMAVQTLL 312
L E+L + + +E + AQ++K+L+ L+ + YG + ++ A+E AV LL
Sbjct: 227 LNELLRRDIIDQVYREFEIAQQLKILESIMENLAKNTGLVVYGIEDIKKANELGAVDKLL 286
Query: 313 ITDDLFRNFEIATRKKYVD-LVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILRF 368
IT+D + T ++ +D L+ ++ G I Q+ LTG+ ++LRF
Sbjct: 287 ITEDYLTD----TGREIIDELLRDIEKKKGKIMIVPKDSPIYYQVKNLTGIVSLLRF 339
>sp|Q9YAZ5|PELO_AERPE Protein pelota homolog OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=pelA PE=1
SV=2
Length = 356
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 153/358 (42%), Gaps = 22/358 (6%)
Query: 16 VKMIPVDSDDLWFAYNLVNAGDSVLAVTVRKVVRQTKSGGKDAERVKLKLEIKVEALDYD 75
V++ P +DLW + GD V T R V SG K ERV + L I+++++++
Sbjct: 13 VRLRPESEEDLWLLRITLRPGDVVRIRTSRDV--PVGSGRK--ERVVMTLRIRLDSIEFQ 68
Query: 76 KEGSALRISGKNILENEHVKI-GAFHSLEIELHRPFVLTKDV-WDSVALDTLHQASDSAA 133
LRISG + + + G HS + + V+ +D W L+ L +
Sbjct: 69 PFTGKLRISGIVVEGPDEFGVKGRRHSTAVSIGTWLVVERDKGWSEQELERLASGR-ARG 127
Query: 134 TADLAVVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYESALNKFFDSVLHAF 193
TA +A V E A L G M I +P K P+ E + K+ D
Sbjct: 128 TAVIAAVDYDE-FALAVLAGHGMKILED-TSARLPGKDDPS---REQEVEKYVDRAAKRI 182
Query: 194 LKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERTQLRPIIANKSRIVIVHTSSGYKHSL 253
++ + AVIA PG K AE+ Q R + + K + V TS G +
Sbjct: 183 VEEAARHRSPIAVIAGPGQLKTSV-------AEKVQ-RAMPSLK--VATVDTSMGGVAGV 232
Query: 254 REVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVEVAHERMAVQTLLI 313
RE L +V +++E + VL+EF ++ Y P V AV T+L+
Sbjct: 233 REALRRESVTRILRELSIVEAEGVLEEFLRRIAKSRDTVAYTPGEVLAVARMGAVDTVLL 292
Query: 314 TDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHFSGEQLGQLTGVAAILRFPLP 371
D L + + A R+ + + V+ GG I +GE+L GV A+LR+P+P
Sbjct: 293 VDTLLHSPDDAVREAVDEALRLVESMGGRVIIIPGDSPAGERLVSFGGVIALLRYPVP 350
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,861,650
Number of Sequences: 539616
Number of extensions: 5244566
Number of successful extensions: 14842
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 14515
Number of HSP's gapped (non-prelim): 142
length of query: 378
length of database: 191,569,459
effective HSP length: 119
effective length of query: 259
effective length of database: 127,355,155
effective search space: 32984985145
effective search space used: 32984985145
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)