Query 042339
Match_columns 94
No_of_seqs 109 out of 123
Neff 3.5
Searched_HMMs 46136
Date Fri Mar 29 05:18:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042339.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042339hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3380 Predicted NAD/FAD-depe 99.1 2.4E-11 5.1E-16 98.7 3.4 44 6-49 282-326 (331)
2 TIGR03467 HpnE squalene-associ 97.1 0.00061 1.3E-08 51.6 3.6 36 14-49 378-416 (419)
3 TIGR00562 proto_IX_ox protopor 96.5 0.0023 5E-08 50.2 3.2 31 19-49 425-455 (462)
4 PLN02576 protoporphyrinogen ox 96.4 0.0032 7E-08 50.2 3.3 28 22-49 455-482 (496)
5 PF01593 Amino_oxidase: Flavin 95.4 0.018 3.8E-07 42.0 3.2 30 19-48 414-447 (450)
6 PRK11883 protoporphyrinogen ox 94.7 0.034 7.4E-07 43.0 3.3 28 22-49 420-447 (451)
7 PRK12416 protoporphyrinogen ox 93.3 0.072 1.6E-06 42.3 2.8 33 17-49 424-456 (463)
8 TIGR02732 zeta_caro_desat caro 92.5 0.17 3.8E-06 41.4 4.0 31 18-48 438-471 (474)
9 PLN02612 phytoene desaturase 90.2 0.4 8.6E-06 40.4 3.9 31 19-49 510-543 (567)
10 PRK07233 hypothetical protein; 89.0 0.74 1.6E-05 35.3 4.3 33 17-49 391-426 (434)
11 PLN02268 probable polyamine ox 88.1 0.56 1.2E-05 36.9 3.2 34 16-49 393-429 (435)
12 TIGR02731 phytoene_desat phyto 85.7 0.91 2E-05 36.0 3.2 34 15-48 414-450 (453)
13 PLN02328 lysine-specific histo 82.6 1.1 2.4E-05 40.5 2.8 29 21-49 643-674 (808)
14 PLN02487 zeta-carotene desatur 80.1 1.9 4.1E-05 37.1 3.2 28 22-49 518-548 (569)
15 PLN02529 lysine-specific histo 80.0 1.3 2.7E-05 39.6 2.2 29 21-49 562-593 (738)
16 TIGR02734 crtI_fam phytoene de 65.5 8.1 0.00018 31.2 3.4 29 21-49 458-487 (502)
17 TIGR02733 desat_CrtD C-3',4' d 64.4 8.2 0.00018 31.2 3.3 30 20-49 457-487 (492)
18 TIGR02730 carot_isom carotene 60.6 11 0.00023 30.7 3.3 30 20-49 457-487 (493)
19 PLN03000 amine oxidase 47.7 16 0.00034 33.8 2.6 29 21-49 587-618 (881)
20 PLN02676 polyamine oxidase 37.3 37 0.0008 28.3 3.0 33 17-49 433-468 (487)
No 1
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]
Probab=99.15 E-value=2.4e-11 Score=98.68 Aligned_cols=44 Identities=27% Similarity=0.322 Sum_probs=40.7
Q ss_pred CCCCCCCCCCcee-CCCCCeeeeccCCCCCchHHHHHHHHHHHhc
Q 042339 6 ALPTNTPSIPCVL-DPRGSAGICGDRLLASSSESAALSGWLLLSN 49 (94)
Q Consensus 6 A~p~~~~g~~~l~-d~~~~lGlCGDWl~GgRVE~AwlSG~aLA~~ 49 (94)
|.|.+..+.++++ |.+..|++|||||.|+|||+||+||.++|+.
T Consensus 282 A~P~~~~~~~~L~ad~~~~l~~cGDwc~GgrVEgA~LSGlAaA~~ 326 (331)
T COG3380 282 AIPNDAVAGPPLDADRELPLYACGDWCAGGRVEGAVLSGLAAADH 326 (331)
T ss_pred ccccccccCCccccCCCCceeeecccccCcchhHHHhccHHHHHH
Confidence 5678888899999 9999999999999999999999999999864
No 2
>TIGR03467 HpnE squalene-associated FAD-dependent desaturase. The sequences in this family are members of the pfam01593 superfamily of flavin-containing amine oxidases which include the phytoene desaturases. These sequences also include a FAD-dependent oxidoreductase domain, pfam01266. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of squalene, the condensation product of the polyisoprenoid farnesyl pyrophosphate. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnE was assigned. This gene is also found in contexts where the downstream conversion of squalene to hopenes is not evidence. The precise nature of the reaction catalyzed by this enzyme is unknown at this time.
Probab=97.07 E-value=0.00061 Score=51.58 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=30.8
Q ss_pred CCceeCCCCCeeeeccCCCCC---chHHHHHHHHHHHhc
Q 042339 14 IPCVLDPRGSAGICGDRLLAS---SSESAALSGWLLLSN 49 (94)
Q Consensus 14 ~~~l~d~~~~lGlCGDWl~Gg---RVE~AwlSG~aLA~~ 49 (94)
.+++.++..+|.+||||+.++ ++|+|+.||..+|+.
T Consensus 378 ~~~~~~~~~~l~~aGd~~~~~~~~~~egA~~SG~~aA~~ 416 (419)
T TIGR03467 378 RPGARTPWPNLFLAGDWTATGWPATMEGAVRSGYQAAEA 416 (419)
T ss_pred CCCCCCCcCCEEEecccccCCCcchHHHHHHHHHHHHHH
Confidence 455667888999999999874 999999999999863
No 3
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end.
Probab=96.54 E-value=0.0023 Score=50.19 Aligned_cols=31 Identities=10% Similarity=0.010 Sum_probs=27.4
Q ss_pred CCCCCeeeeccCCCCCchHHHHHHHHHHHhc
Q 042339 19 DPRGSAGICGDRLLASSSESAALSGWLLLSN 49 (94)
Q Consensus 19 d~~~~lGlCGDWl~GgRVE~AwlSG~aLA~~ 49 (94)
....+|.+||||+.+.+||+|+.||.++|+.
T Consensus 425 ~~~~~l~l~G~~~~g~~i~~~i~sg~~~a~~ 455 (462)
T TIGR00562 425 SAYPGVFLTGNSFEGVGIPDCIDQGKAAASD 455 (462)
T ss_pred hhCCCEEEeccccCCCcHHHHHHHHHHHHHH
Confidence 3345999999999999999999999999865
No 4
>PLN02576 protoporphyrinogen oxidase
Probab=96.39 E-value=0.0032 Score=50.20 Aligned_cols=28 Identities=11% Similarity=-0.064 Sum_probs=26.5
Q ss_pred CCeeeeccCCCCCchHHHHHHHHHHHhc
Q 042339 22 GSAGICGDRLLASSSESAALSGWLLLSN 49 (94)
Q Consensus 22 ~~lGlCGDWl~GgRVE~AwlSG~aLA~~ 49 (94)
.+|.+||||+.|.+||+|+.||..+|+.
T Consensus 455 ~~l~~aG~~~~g~~i~~ai~sg~~aA~~ 482 (496)
T PLN02576 455 PGLFLGGNYRGGVALGKCVESGYEAADL 482 (496)
T ss_pred CCEEEeccccCCccHHHHHHHHHHHHHH
Confidence 5999999999999999999999999876
No 5
>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. In vertebrates MAO plays an important role in regulating the intracellular levels of amines via their oxidation; these include various neurotransmitters, neurotoxins and trace amines []. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium []. PAOs in plants, bacteria and protozoa oxidise spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines []. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2Z3Y_A 2UXN_A 2Y48_A 2HKO_A 2XAF_A 2X0L_A 2XAJ_A 2UXX_A 2V1D_A 2Z5U_A ....
Probab=95.37 E-value=0.018 Score=42.01 Aligned_cols=30 Identities=27% Similarity=0.205 Sum_probs=24.5
Q ss_pred CCC-CCeeeeccCCCCC---chHHHHHHHHHHHh
Q 042339 19 DPR-GSAGICGDRLLAS---SSESAALSGWLLLS 48 (94)
Q Consensus 19 d~~-~~lGlCGDWl~Gg---RVE~AwlSG~aLA~ 48 (94)
.+- .+|.+||||...+ -+|+|++||...|+
T Consensus 414 ~~~~~~l~~aG~~~~~~~~~~~~gA~~sG~~aA~ 447 (450)
T PF01593_consen 414 TPIDPGLYFAGDWTSPGYPGGIEGAILSGRRAAE 447 (450)
T ss_dssp SCBTTTEEE-SGGGSSSSTTSHHHHHHHHHHHHH
T ss_pred CCcceEEEEeecccCCCCCCcHHHHHHHHHHHHH
Confidence 444 5999999999855 99999999998875
No 6
>PRK11883 protoporphyrinogen oxidase; Reviewed
Probab=94.70 E-value=0.034 Score=43.04 Aligned_cols=28 Identities=4% Similarity=-0.083 Sum_probs=25.7
Q ss_pred CCeeeeccCCCCCchHHHHHHHHHHHhc
Q 042339 22 GSAGICGDRLLASSSESAALSGWLLLSN 49 (94)
Q Consensus 22 ~~lGlCGDWl~GgRVE~AwlSG~aLA~~ 49 (94)
.+|.++|||+.+..||+|+.||...|+.
T Consensus 420 ~~l~~aG~~~~g~~i~~av~sg~~~a~~ 447 (451)
T PRK11883 420 PGLYVAGASFEGVGLPDCIAQAKRAAAR 447 (451)
T ss_pred CCEEEECcccCCccHHHHHHHHHHHHHH
Confidence 3899999999999999999999999864
No 7
>PRK12416 protoporphyrinogen oxidase; Provisional
Probab=93.34 E-value=0.072 Score=42.32 Aligned_cols=33 Identities=6% Similarity=0.007 Sum_probs=28.4
Q ss_pred eeCCCCCeeeeccCCCCCchHHHHHHHHHHHhc
Q 042339 17 VLDPRGSAGICGDRLLASSSESAALSGWLLLSN 49 (94)
Q Consensus 17 l~d~~~~lGlCGDWl~GgRVE~AwlSG~aLA~~ 49 (94)
+.++..+|.+||||+.+..||+|..||...|+.
T Consensus 424 l~~~~~~l~~aG~~~~g~~i~~ai~sg~~aA~~ 456 (463)
T PRK12416 424 MMNLYPNIYLAGASYYGVGIGACIGNGKNTANE 456 (463)
T ss_pred HHhhCCCeEEeccccccccHHHHHHHHHHHHHH
Confidence 334556999999999999999999999999864
No 8
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase. Carotene 7,8-desaturase, also called zeta-carotene desaturase, catalyzes multiple steps in the pathway from geranylgeranyl-PP to all-trans-lycopene in plants and cyanobacteria. A similar enzyme and pathway is found in the green sulfur bacterium Chlorobium tepidum.
Probab=92.52 E-value=0.17 Score=41.40 Aligned_cols=31 Identities=26% Similarity=0.206 Sum_probs=26.5
Q ss_pred eCCCCCeeeeccCCCC---CchHHHHHHHHHHHh
Q 042339 18 LDPRGSAGICGDRLLA---SSSESAALSGWLLLS 48 (94)
Q Consensus 18 ~d~~~~lGlCGDWl~G---gRVE~AwlSG~aLA~ 48 (94)
..+..+|++||||... ..+|+|..||...|+
T Consensus 438 ~t~~~~l~lAGD~t~~~~pas~egAv~sG~~aA~ 471 (474)
T TIGR02732 438 KTPISNFFLAGSYTQQDYIDSMEGATLSGRQAAA 471 (474)
T ss_pred CCCCCCeEEeccccccCchHHHhHHHHHHHHHHH
Confidence 3344699999999987 899999999999885
No 9
>PLN02612 phytoene desaturase
Probab=90.20 E-value=0.4 Score=40.45 Aligned_cols=31 Identities=32% Similarity=0.306 Sum_probs=26.3
Q ss_pred CCCCCeeeeccCCCC---CchHHHHHHHHHHHhc
Q 042339 19 DPRGSAGICGDRLLA---SSSESAALSGWLLLSN 49 (94)
Q Consensus 19 d~~~~lGlCGDWl~G---gRVE~AwlSG~aLA~~ 49 (94)
.|-.+|++||||... +.+|+|.+||...|+.
T Consensus 510 tPi~~l~lAGd~t~~~~~~smeGAv~SG~~AA~~ 543 (567)
T PLN02612 510 SPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQS 543 (567)
T ss_pred CccCCEEEeecceeCCchhhHHHHHHHHHHHHHH
Confidence 344689999999854 6899999999999876
No 10
>PRK07233 hypothetical protein; Provisional
Probab=88.97 E-value=0.74 Score=35.31 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=26.5
Q ss_pred eeCCCCCeeeeccCCC---CCchHHHHHHHHHHHhc
Q 042339 17 VLDPRGSAGICGDRLL---ASSSESAALSGWLLLSN 49 (94)
Q Consensus 17 l~d~~~~lGlCGDWl~---GgRVE~AwlSG~aLA~~ 49 (94)
+-.+..+|.+||||.. +..+|+|..||...|+.
T Consensus 391 ~~~~~~~l~~aG~~~~~~~~~~~~~Ai~sG~~aA~~ 426 (434)
T PRK07233 391 YDTPIEGLYLAGMSQIYPEDRSINGSVRAGRRVARE 426 (434)
T ss_pred cccCcCCEEEeCCcccCCccCchhHHHHHHHHHHHH
Confidence 3445579999999753 34899999999999976
No 11
>PLN02268 probable polyamine oxidase
Probab=88.09 E-value=0.56 Score=36.88 Aligned_cols=34 Identities=15% Similarity=0.127 Sum_probs=28.2
Q ss_pred ceeCCCCCeeeeccCCCC---CchHHHHHHHHHHHhc
Q 042339 16 CVLDPRGSAGICGDRLLA---SSSESAALSGWLLLSN 49 (94)
Q Consensus 16 ~l~d~~~~lGlCGDWl~G---gRVE~AwlSG~aLA~~ 49 (94)
.+..|..+|..||+++.. +.||+|+.||...|+.
T Consensus 393 ~l~~p~~~l~FAGe~ts~~~~g~~eGA~~sG~raA~~ 429 (435)
T PLN02268 393 RLRAPVDNLFFAGEATSSDFPGSVHGAYSTGVMAAEE 429 (435)
T ss_pred HHhCCCCCeEEeeccCCCcccccHHHHHHHHHHHHHH
Confidence 345677899999999865 6999999999998764
No 12
>TIGR02731 phytoene_desat phytoene desaturase. Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway.
Probab=85.65 E-value=0.91 Score=35.99 Aligned_cols=34 Identities=32% Similarity=0.267 Sum_probs=28.1
Q ss_pred CceeCCCCCeeeeccCCC---CCchHHHHHHHHHHHh
Q 042339 15 PCVLDPRGSAGICGDRLL---ASSSESAALSGWLLLS 48 (94)
Q Consensus 15 ~~l~d~~~~lGlCGDWl~---GgRVE~AwlSG~aLA~ 48 (94)
+.+..+..+|.++|||.. .+.+|+|..||...|+
T Consensus 414 ~~~~~p~~~l~~AG~~~a~~~~g~~egAi~SG~~AA~ 450 (453)
T TIGR02731 414 PHQKTPIPNFFLAGDYTKQKYLASMEGAVLSGKLCAQ 450 (453)
T ss_pred ccccCccCCEEEeehhccCcccccHHHHHHHHHHHHH
Confidence 345566779999999974 3689999999999886
No 13
>PLN02328 lysine-specific histone demethylase 1 homolog
Probab=82.64 E-value=1.1 Score=40.51 Aligned_cols=29 Identities=24% Similarity=0.221 Sum_probs=24.6
Q ss_pred CCCeeeeccCCCC---CchHHHHHHHHHHHhc
Q 042339 21 RGSAGICGDRLLA---SSSESAALSGWLLLSN 49 (94)
Q Consensus 21 ~~~lGlCGDWl~G---gRVE~AwlSG~aLA~~ 49 (94)
+.+|..||+++.. +.||+|++||...|+.
T Consensus 643 ~GRL~FAGEaTs~~~~GtVhGAi~SGlRAA~e 674 (808)
T PLN02328 643 DGRVFFAGEATNKQYPATMHGAFLSGMREAAN 674 (808)
T ss_pred CCCEEEEEhhHhCCCCeEhHHHHHHHHHHHHH
Confidence 5699999999875 5999999999987644
No 14
>PLN02487 zeta-carotene desaturase
Probab=80.07 E-value=1.9 Score=37.13 Aligned_cols=28 Identities=25% Similarity=0.169 Sum_probs=24.4
Q ss_pred CCeeeeccCCCC---CchHHHHHHHHHHHhc
Q 042339 22 GSAGICGDRLLA---SSSESAALSGWLLLSN 49 (94)
Q Consensus 22 ~~lGlCGDWl~G---gRVE~AwlSG~aLA~~ 49 (94)
.+|.+||||... ..+|+|..||...|+.
T Consensus 518 ~nl~LAGD~t~~~yPat~EgAv~SG~~AA~~ 548 (569)
T PLN02487 518 SNFFLAGSYTKQDYIDSMEGATLSGRQAAAY 548 (569)
T ss_pred CCEEEeCcccccCCcchHHHHHHHHHHHHHH
Confidence 599999999853 5999999999999875
No 15
>PLN02529 lysine-specific histone demethylase 1
Probab=79.95 E-value=1.3 Score=39.61 Aligned_cols=29 Identities=24% Similarity=0.201 Sum_probs=24.7
Q ss_pred CCCeeeeccCCCC---CchHHHHHHHHHHHhc
Q 042339 21 RGSAGICGDRLLA---SSSESAALSGWLLLSN 49 (94)
Q Consensus 21 ~~~lGlCGDWl~G---gRVE~AwlSG~aLA~~ 49 (94)
..+|..||||+.. +.||+|++||...|+.
T Consensus 562 ~grL~FAGEaTs~~~pgtVeGAi~SG~RAA~e 593 (738)
T PLN02529 562 SGRLFFAGEATTRQYPATMHGAFLSGLREASR 593 (738)
T ss_pred CCCEEEEEHHHhCCCCeEeHHHHHHHHHHHHH
Confidence 5799999999875 5999999999987644
No 16
>TIGR02734 crtI_fam phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger Pfam family pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis.
Probab=65.49 E-value=8.1 Score=31.18 Aligned_cols=29 Identities=7% Similarity=-0.154 Sum_probs=24.9
Q ss_pred CCCeeeeccCCC-CCchHHHHHHHHHHHhc
Q 042339 21 RGSAGICGDRLL-ASSSESAALSGWLLLSN 49 (94)
Q Consensus 21 ~~~lGlCGDWl~-GgRVE~AwlSG~aLA~~ 49 (94)
-.+|++||+|+. |+-|-+|.+||.-.|+.
T Consensus 458 i~gLyl~G~~~~pG~Gv~g~~~sg~~~a~~ 487 (502)
T TIGR02734 458 IDNLYLVGAGTHPGAGVPGVLGSAKATAKL 487 (502)
T ss_pred CCCEEEeCCCCCCCCCHHHHHHHHHHHHHH
Confidence 359999999997 56999999999988765
No 17
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD. Members of this family are slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. strain PCC 6803, and close homologs (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyzes the first step that is committed to myxoxanthophyll.
Probab=64.43 E-value=8.2 Score=31.16 Aligned_cols=30 Identities=17% Similarity=0.436 Sum_probs=25.5
Q ss_pred CCCCeeeeccCCC-CCchHHHHHHHHHHHhc
Q 042339 20 PRGSAGICGDRLL-ASSSESAALSGWLLLSN 49 (94)
Q Consensus 20 ~~~~lGlCGDWl~-GgRVE~AwlSG~aLA~~ 49 (94)
+-.+|++||+|+. |+-|-++.+||...|+.
T Consensus 457 ~i~gLyl~G~~~~pG~Gv~g~~~sg~~~a~~ 487 (492)
T TIGR02733 457 PVKGLWLCGDSIHPGEGTAGVSYSALMVVRQ 487 (492)
T ss_pred CCCCeEEecCccCCCCcHHHHHHHHHHHHHH
Confidence 4459999999987 46999999999998865
No 18
>TIGR02730 carot_isom carotene isomerase. Members of this family, including sll0033 (crtH) of Synechocystis sp. PCC 6803, catalyze a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization.
Probab=60.62 E-value=11 Score=30.75 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=25.7
Q ss_pred CCCCeeeeccCCC-CCchHHHHHHHHHHHhc
Q 042339 20 PRGSAGICGDRLL-ASSSESAALSGWLLLSN 49 (94)
Q Consensus 20 ~~~~lGlCGDWl~-GgRVE~AwlSG~aLA~~ 49 (94)
+-.+|++||||.. |+-|-++.+||...|+.
T Consensus 457 ~i~gLyl~G~~~~pG~Gv~g~~~sG~~~a~~ 487 (493)
T TIGR02730 457 AIPGLYCVGDSCFPGQGLNAVAFSGFACAHR 487 (493)
T ss_pred CCCCeEEecCcCCCCCCHHHHHHHHHHHHHH
Confidence 3459999999986 57999999999988865
No 19
>PLN03000 amine oxidase
Probab=47.68 E-value=16 Score=33.80 Aligned_cols=29 Identities=17% Similarity=0.194 Sum_probs=23.9
Q ss_pred CCCeeeeccCCCC---CchHHHHHHHHHHHhc
Q 042339 21 RGSAGICGDRLLA---SSSESAALSGWLLLSN 49 (94)
Q Consensus 21 ~~~lGlCGDWl~G---gRVE~AwlSG~aLA~~ 49 (94)
+.+|..+|+.... +-||+|++||...|+.
T Consensus 587 ~GRIfFAGEaTs~~~~GTVhGAieSGlRAA~e 618 (881)
T PLN03000 587 DGRLFFAGEATTRRYPATMHGAFVTGLREAAN 618 (881)
T ss_pred CCcEEEeehHHhCCCCeeHHHHHHHHHHHHHH
Confidence 5699999998754 7899999999977543
No 20
>PLN02676 polyamine oxidase
Probab=37.34 E-value=37 Score=28.25 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=26.6
Q ss_pred eeCCCCCeeeeccCCC---CCchHHHHHHHHHHHhc
Q 042339 17 VLDPRGSAGICGDRLL---ASSSESAALSGWLLLSN 49 (94)
Q Consensus 17 l~d~~~~lGlCGDWl~---GgRVE~AwlSG~aLA~~ 49 (94)
+-.|..+|..+|+-+. .+-||+|+.||...|+.
T Consensus 433 L~~P~gri~FAGe~ts~~~~g~~eGA~~SG~RaA~~ 468 (487)
T PLN02676 433 IRAPVGRVYFTGEHTSEKYNGYVHGAYLAGIDTAND 468 (487)
T ss_pred HhCCCCceEEeccccccccccchHHHHHHHHHHHHH
Confidence 3456679999998764 47899999999988755
Done!