Your job contains 1 sequence.
>042342
PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK
VLIAGFGRKGHAVATSPPIISLKGCMR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042342
(87 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151301 - symbol:AT5G02960 species:3702 "Arabi... 350 6.0e-32 1
TAIR|locus:2074954 - symbol:AT3G09680 species:3702 "Arabi... 341 5.4e-31 1
UNIPROTKB|F1NDC2 - symbol:RPS23 "Uncharacterized protein"... 336 1.8e-30 1
UNIPROTKB|E1BEQ3 - symbol:E1BEQ3 "Uncharacterized protein... 336 1.8e-30 1
UNIPROTKB|Q3T199 - symbol:RPS23 "40S ribosomal protein S2... 336 1.8e-30 1
UNIPROTKB|J9NZX6 - symbol:RPS23 "Uncharacterized protein"... 336 1.8e-30 1
UNIPROTKB|D6RD47 - symbol:RPS23 "40S ribosomal protein S2... 336 1.8e-30 1
UNIPROTKB|P62266 - symbol:RPS23 "40S ribosomal protein S2... 336 1.8e-30 1
UNIPROTKB|F2Z512 - symbol:RPS23 "40S ribosomal protein S2... 336 1.8e-30 1
UNIPROTKB|Q6SA96 - symbol:RPS23 "40S ribosomal protein S2... 336 1.8e-30 1
MGI|MGI:1913725 - symbol:Rps23 "ribosomal protein S23" sp... 336 1.8e-30 1
RGD|621039 - symbol:Rps23 "ribosomal protein S23" species... 336 1.8e-30 1
ZFIN|ZDB-GENE-080220-50 - symbol:rps23 "ribosomal protein... 336 1.8e-30 1
UNIPROTKB|G3X7D5 - symbol:LOC787803 "Uncharacterized prot... 335 2.3e-30 1
UNIPROTKB|I3LMI4 - symbol:LOC100523526 "Uncharacterized p... 332 4.9e-30 1
FB|FBgn0033912 - symbol:RpS23 "Ribosomal protein S23" spe... 328 1.3e-29 1
WB|WBGene00004492 - symbol:rps-23 species:6239 "Caenorhab... 328 1.3e-29 1
RGD|1563570 - symbol:RGD1563570 "similar to ribosomal pro... 325 2.7e-29 1
ASPGD|ASPL0000058023 - symbol:AN1345 species:162425 "Emer... 313 5.0e-28 1
SGD|S000003350 - symbol:RPS23A "Ribosomal protein 28 (rp2... 312 6.4e-28 1
SGD|S000006336 - symbol:RPS23B "Ribosomal protein 28 (rp2... 312 6.4e-28 1
CGD|CAL0000513 - symbol:RPS23A species:5476 "Candida albi... 311 8.2e-28 1
UNIPROTKB|E1B8G4 - symbol:E1B8G4 "Uncharacterized protein... 311 8.2e-28 1
POMBASE|SPAC23C11.02c - symbol:rps23 "40S ribosomal prote... 308 1.7e-27 1
POMBASE|SPBP4H10.13 - symbol:rps2302 "40S ribosomal prote... 308 1.7e-27 1
GENEDB_PFALCIPARUM|PFC0290w - symbol:PFC0290w "40S riboso... 307 2.2e-27 1
DICTYBASE|DDB_G0272250 - symbol:rps23 "40S ribosomal prot... 304 4.5e-27 1
UNIPROTKB|D6R9I7 - symbol:RPS23 "40S ribosomal protein S2... 248 3.9e-21 1
UNIPROTKB|F1RS51 - symbol:F1RS51 "Uncharacterized protein... 231 2.5e-19 1
UNIPROTKB|F1PS88 - symbol:F1PS88 "Uncharacterized protein... 225 1.1e-18 1
UNIPROTKB|D6RIX0 - symbol:RPS23 "40S ribosomal protein S2... 183 3.0e-14 1
UNIPROTKB|H9L236 - symbol:MRPS12 "Uncharacterized protein... 118 2.3e-07 1
UNIPROTKB|E2RE10 - symbol:MRPS12 "Uncharacterized protein... 114 6.1e-07 1
MGI|MGI:1346333 - symbol:Mrps12 "mitochondrial ribosomal ... 112 1.0e-06 1
RGD|1306221 - symbol:Mrps12 "mitochondrial ribosomal prot... 112 1.0e-06 1
WB|WBGene00011391 - symbol:mrps-12 species:6239 "Caenorha... 111 1.3e-06 1
UNIPROTKB|Q29RU1 - symbol:MRPS12 "28S ribosomal protein S... 109 2.1e-06 1
CGD|CAL0001528 - symbol:orf19.2438 species:5476 "Candida ... 108 2.6e-06 1
UNIPROTKB|O15235 - symbol:MRPS12 "28S ribosomal protein S... 107 3.4e-06 1
ZFIN|ZDB-GENE-091204-48 - symbol:si:dkey-17e16.10 "si:dke... 104 7.0e-06 1
FB|FBgn0003714 - symbol:tko "technical knockout" species:... 99 2.4e-05 1
TIGR_CMR|APH_1035 - symbol:APH_1035 "ribosomal protein S1... 89 0.00027 1
TIGR_CMR|ECH_0963 - symbol:ECH_0963 "ribosomal protein S1... 88 0.00035 1
SGD|S000005319 - symbol:MRPS12 "Mitochondrial protein" sp... 87 0.00047 1
ASPGD|ASPL0000075253 - symbol:AN4730 species:162425 "Emer... 86 0.00057 1
TIGR_CMR|DET_0470 - symbol:DET_0470 "ribosomal protein S1... 85 0.00072 1
>TAIR|locus:2151301 [details] [associations]
symbol:AT5G02960 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL162973
KO:K02973 GO:GO:0022627 PANTHER:PTHR11652 eggNOG:COG0048
UniGene:At.22945 HOGENOM:HOG000040064 ProtClustDB:CLSN2687528
TIGRFAMs:TIGR00982 EMBL:AY039983 EMBL:AY052330 EMBL:AY113931
EMBL:Z17759 IPI:IPI00535189 PIR:T48317 RefSeq:NP_195916.1
ProteinModelPortal:P49201 SMR:P49201 STRING:P49201 PaxDb:P49201
PRIDE:P49201 EnsemblPlants:AT5G02960.1 GeneID:831724
KEGG:ath:AT5G02960 GeneFarm:968 TAIR:At5g02960 InParanoid:P49201
OMA:DGAINFI PhylomeDB:P49201 Genevestigator:P49201
GermOnline:AT5G02960 Uniprot:P49201
Length = 142
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 67/79 (84%), Positives = 71/79 (89%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PFAG SHAKGIVLEKIGIEAKQPN AIRKC+RVQLIKNGKKI FVP+DGCLNYIEEND+
Sbjct: 39 PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDE 98
Query: 61 VLIAGFGRKGHAVATSPPI 79
VLIAGFGRKGHAV P +
Sbjct: 99 VLIAGFGRKGHAVGDIPGV 117
>TAIR|locus:2074954 [details] [associations]
symbol:AT3G09680 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0006412
EMBL:AC016661 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0022627 PANTHER:PTHR11652
eggNOG:COG0048 EMBL:AY084484 IPI:IPI00540777 RefSeq:NP_566351.1
UniGene:At.22945 UniGene:At.40058 ProteinModelPortal:Q9SF35
SMR:Q9SF35 STRING:Q9SF35 PaxDb:Q9SF35 PRIDE:Q9SF35
EnsemblPlants:AT3G09680.1 GeneID:820125 KEGG:ath:AT3G09680
GeneFarm:969 TAIR:At3g09680 HOGENOM:HOG000040064 InParanoid:Q9SF35
OMA:FACSSHA PhylomeDB:Q9SF35 ProtClustDB:CLSN2687528
Genevestigator:Q9SF35 GermOnline:AT3G09680 TIGRFAMs:TIGR00982
Uniprot:Q9SF35
Length = 142
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 66/79 (83%), Positives = 70/79 (88%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PFA SHAKGIVLEKIGIEAKQPN AIRKC+RVQLIKNGKKI FVP+DGCLNYIEEND+
Sbjct: 39 PFACSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDE 98
Query: 61 VLIAGFGRKGHAVATSPPI 79
VLIAGFGRKGHAV P +
Sbjct: 99 VLIAGFGRKGHAVGDIPGV 117
>UNIPROTKB|F1NDC2 [details] [associations]
symbol:RPS23 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0022627
PANTHER:PTHR11652 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 EMBL:AADN02047835 IPI:IPI00602355
Ensembl:ENSGALT00000025176 Uniprot:F1NDC2
Length = 145
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 42 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 102 VLVAGFGRKGHAVGDIPGV 120
>UNIPROTKB|E1BEQ3 [details] [associations]
symbol:E1BEQ3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 EMBL:DAAA02031102
Ensembl:ENSBTAT00000063143 OMA:NEAPFAG NextBio:20899002
Uniprot:E1BEQ3
Length = 143
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGTSHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>UNIPROTKB|Q3T199 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9913 "Bos
taurus" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 OMA:FACSSHA TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 EMBL:BC102049 IPI:IPI00906795
RefSeq:NP_001029862.1 UniGene:Bt.63544 ProteinModelPortal:Q3T199
SMR:Q3T199 STRING:Q3T199 PRIDE:Q3T199 Ensembl:ENSBTAT00000017770
GeneID:540129 KEGG:bta:540129 CTD:6228 HOVERGEN:HBG054200
OrthoDB:EOG4Z8XXP NextBio:20878431 Uniprot:Q3T199
Length = 143
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>UNIPROTKB|J9NZX6 [details] [associations]
symbol:RPS23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973
GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 CTD:6228 EMBL:AAEX03002095
RefSeq:XP_536303.1 ProteinModelPortal:J9NZX6
Ensembl:ENSCAFT00000043903 GeneID:479159 KEGG:cfa:479159
Uniprot:J9NZX6
Length = 143
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>UNIPROTKB|D6RD47 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 HGNC:HGNC:10410
ChiTaRS:RPS23 EMBL:AC010598 IPI:IPI00966986 SMR:D6RD47
Ensembl:ENST00000510210 Ensembl:ENST00000512493 Uniprot:D6RD47
Length = 134
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>UNIPROTKB|P62266 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006412 "translation" evidence=IC;TAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005840
"ribosome" evidence=NAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0019083 PANTHER:PTHR11652 eggNOG:COG0048
HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 OMA:DGAINFI CTD:6228
HOVERGEN:HBG054200 OrthoDB:EOG4Z8XXP EMBL:D14530 EMBL:CR456996
EMBL:BC070221 EMBL:AB007158 IPI:IPI00218606 PIR:S42105
RefSeq:NP_001016.1 UniGene:Hs.527193 ProteinModelPortal:P62266
SMR:P62266 IntAct:P62266 MINT:MINT-5000369 STRING:P62266
PhosphoSite:P62266 DMDM:50403755 PaxDb:P62266 PRIDE:P62266
Ensembl:ENST00000296674 GeneID:6228 KEGG:hsa:6228 UCSC:uc003khu.3
GeneCards:GC05M081569 HGNC:HGNC:10410 MIM:603683 neXtProt:NX_P62266
PharmGKB:PA34813 InParanoid:P62266 PhylomeDB:P62266 ChiTaRS:RPS23
GenomeRNAi:6228 NextBio:24175 ArrayExpress:P62266 Bgee:P62266
CleanEx:HS_RPS23 Genevestigator:P62266 GermOnline:ENSG00000186468
Uniprot:P62266
Length = 143
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>UNIPROTKB|F2Z512 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9823 "Sus
scrofa" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 EMBL:CU984598
ProteinModelPortal:F2Z512 SMR:F2Z512 PRIDE:F2Z512
Ensembl:ENSSSCT00000015437 Uniprot:F2Z512
Length = 143
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>UNIPROTKB|Q6SA96 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 CTD:6228
HOVERGEN:HBG054200 OrthoDB:EOG4Z8XXP EMBL:AY461380
RefSeq:NP_998929.1 UniGene:Ssc.784 ProteinModelPortal:Q6SA96
SMR:Q6SA96 STRING:Q6SA96 GeneID:396638 KEGG:ssc:396638
Uniprot:Q6SA96
Length = 143
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>MGI|MGI:1913725 [details] [associations]
symbol:Rps23 "ribosomal protein S23" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR005680 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055 MGI:MGI:1913725
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0022627 PANTHER:PTHR11652
eggNOG:COG0048 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 CTD:6228 HOVERGEN:HBG054200
OrthoDB:EOG4Z8XXP EMBL:AK002573 EMBL:AK010594 EMBL:AK010608
EMBL:AK012438 EMBL:AK013720 EMBL:AK050580 EMBL:AK088085
EMBL:AK166994 EMBL:AK168587 EMBL:BC002145 EMBL:BC054435
EMBL:BC078418 IPI:IPI00972920 RefSeq:NP_077137.1 UniGene:Mm.306302
ProteinModelPortal:P62267 SMR:P62267 STRING:P62267
PhosphoSite:P62267 PaxDb:P62267 PRIDE:P62267
Ensembl:ENSMUST00000051955 GeneID:66475 KEGG:mmu:66475
UCSC:uc007rjq.2 InParanoid:P62267 NextBio:321794 Bgee:P62267
CleanEx:MM_RPS23 Genevestigator:P62267
GermOnline:ENSMUSG00000049517 GermOnline:ENSMUSG00000063001
Uniprot:P62267
Length = 143
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>RGD|621039 [details] [associations]
symbol:Rps23 "ribosomal protein S23" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=NAS] [GO:0006412
"translation" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=NAS] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=NAS]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 RGD:621039 GO:GO:0006412
GO:GO:0045182 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973 GO:GO:0015935
PANTHER:PTHR11652 eggNOG:COG0048 HOGENOM:HOG000040064
TIGRFAMs:TIGR00982 GeneTree:ENSGT00550000074784 CTD:6228
HOVERGEN:HBG054200 OrthoDB:EOG4Z8XXP EMBL:X77398 EMBL:BC058134
IPI:IPI00210238 PIR:S41955 RefSeq:NP_511172.1 UniGene:Rn.2139
ProteinModelPortal:P62268 SMR:P62268 IntAct:P62268 STRING:P62268
PhosphoSite:P62268 PRIDE:P62268 Ensembl:ENSRNOT00000022348
GeneID:124323 KEGG:rno:124323 UCSC:RGD:621039 InParanoid:P62268
NextBio:620455 Genevestigator:P62268 GermOnline:ENSRNOG00000016580
Uniprot:P62268
Length = 143
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>ZFIN|ZDB-GENE-080220-50 [details] [associations]
symbol:rps23 "ribosomal protein S23" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
ZFIN:ZDB-GENE-080220-50 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973
GO:GO:0015935 PANTHER:PTHR11652 eggNOG:COG0048 HOGENOM:HOG000040064
TIGRFAMs:TIGR00982 OMA:DGAINFI GeneTree:ENSGT00550000074784
CTD:6228 HOVERGEN:HBG054200 OrthoDB:EOG4Z8XXP EMBL:FP067440
EMBL:BC153998 EMBL:BC171649 EMBL:BC171653 IPI:IPI00772264
RefSeq:NP_001103591.1 UniGene:Dr.41813 SMR:A8KB78 STRING:A8KB78
Ensembl:ENSDART00000039206 GeneID:100000341 KEGG:dre:100000341
NextBio:20784605 Uniprot:A8KB78
Length = 143
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>UNIPROTKB|G3X7D5 [details] [associations]
symbol:LOC787803 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
OMA:DGAINFI GeneTree:ENSGT00550000074784 EMBL:DAAA02073203
Ensembl:ENSBTAT00000024424 Uniprot:G3X7D5
Length = 141
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 61/79 (77%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKG+VLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 38 PFGGASHAKGVVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 97
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 98 VLVAGFGRKGHAVGDIPGV 116
>UNIPROTKB|I3LMI4 [details] [associations]
symbol:LOC100523526 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 OMA:NEAPFAG EMBL:CU633628
RefSeq:XP_003121525.1 Ensembl:ENSSSCT00000026361 GeneID:100523526
KEGG:ssc:100523526 Uniprot:I3LMI4
Length = 143
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 61/79 (77%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVL+K+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLKKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>FB|FBgn0033912 [details] [associations]
symbol:RpS23 "Ribosomal protein S23" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0005840
"ribosome" evidence=IDA] [GO:0051298 "centrosome duplication"
evidence=IMP] [GO:0051297 "centrosome organization" evidence=IMP]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 EMBL:AE013599 GO:GO:0051298
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973 GO:GO:0015935
PANTHER:PTHR11652 eggNOG:COG0048 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 CTD:6228 EMBL:AY089523
RefSeq:NP_610939.2 UniGene:Dm.4964 ProteinModelPortal:Q8T3U2
SMR:Q8T3U2 MINT:MINT-852223 STRING:Q8T3U2 PaxDb:Q8T3U2 PRIDE:Q8T3U2
EnsemblMetazoa:FBtr0087575 GeneID:36576 KEGG:dme:Dmel_CG8415
FlyBase:FBgn0033912 InParanoid:Q8T3U2 OrthoDB:EOG4BK3M5
PhylomeDB:Q8T3U2 GenomeRNAi:36576 NextBio:799290 Bgee:Q8T3U2
GermOnline:CG8415 Uniprot:Q8T3U2
Length = 143
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 62/79 (78%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP DG LNYIEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>WB|WBGene00004492 [details] [associations]
symbol:rps-23 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0002119 GO:GO:0006412
GO:GO:0018996 GO:GO:0040035 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973 EMBL:Z70684
GO:GO:0015935 PANTHER:PTHR11652 eggNOG:COG0048 HOGENOM:HOG000040064
TIGRFAMs:TIGR00982 OMA:DGAINFI GeneTree:ENSGT00550000074784
PIR:T21497 RefSeq:NP_502365.1 ProteinModelPortal:Q19877 SMR:Q19877
DIP:DIP-27207N MINT:MINT-1046438 STRING:Q19877 PaxDb:Q19877
EnsemblMetazoa:F28D1.7.1 EnsemblMetazoa:F28D1.7.2
EnsemblMetazoa:F28D1.7.3 GeneID:178188 KEGG:cel:CELE_F28D1.7
UCSC:F28D1.7.1 CTD:178188 WormBase:F28D1.7 InParanoid:Q19877
NextBio:900090 Uniprot:Q19877
Length = 143
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 60/79 (75%), Positives = 68/79 (86%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEKIG+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN++EEND+
Sbjct: 40 PFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL++GFGR GHAV P +
Sbjct: 100 VLVSGFGRSGHAVGDIPGV 118
>RGD|1563570 [details] [associations]
symbol:RGD1563570 "similar to ribosomal protein S23"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 RGD:1563570 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 OrthoDB:EOG4Z8XXP IPI:IPI00566901
RefSeq:XP_001077912.1 RefSeq:XP_573594.1 Ensembl:ENSRNOT00000046342
GeneID:498360 KEGG:rno:498360 UCSC:RGD:1563570 CTD:498360
NextBio:699547 Uniprot:D4A9Q3
Length = 143
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 60/79 (75%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G HAKGIVLEK+G+EAKQPN AIRKC RV LIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGAFHAKGIVLEKVGVEAKQPNSAIRKCVRVHLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>ASPGD|ASPL0000058023 [details] [associations]
symbol:AN1345 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0006450 "regulation of translational fidelity" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 EMBL:BN001308 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
KO:K02973 EMBL:AACD01000018 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 OMA:DGAINFI
OrthoDB:EOG4M0JB5 RefSeq:XP_658949.1 ProteinModelPortal:Q5BDN5
SMR:Q5BDN5 STRING:Q5BDN5 EnsemblFungi:CADANIAT00001267
GeneID:2877118 KEGG:ani:AN1345.2 Uniprot:Q5BDN5
Length = 145
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC +VQLIKNGKK+ FVP+DGCLN+I+END+
Sbjct: 42 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVKVQLIKNGKKVTAFVPNDGCLNFIDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>SGD|S000003350 [details] [associations]
symbol:RPS23A "Ribosomal protein 28 (rp28) of the small (40S)
ribosomal subunit, req" species:4932 "Saccharomyces cerevisiae"
[GO:0006450 "regulation of translational fidelity"
evidence=IGI;IMP] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR005680 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055 SGD:S000003350
EMBL:BK006941 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 RefSeq:NP_011633.3 GeneID:853015
KEGG:sce:YGR118W KO:K02973 GO:GO:0006450 GO:GO:0000462 PDB:1S1H
PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C
PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C
PDBsum:3U5G KO:K04460 RefSeq:NP_011639.3 GeneID:853023
KEGG:sce:YGR123C PANTHER:PTHR11652 PDB:1K5X PDBsum:1K5X
TIGRFAMs:TIGR00982 EMBL:M96570 EMBL:Z72903 PIR:A46703
RefSeq:NP_015457.1 ProteinModelPortal:P0CX29 SMR:P0CX29
PRIDE:P0CX29 EnsemblFungi:YGR118W EnsemblFungi:YPR132W
GeneID:856250 KEGG:sce:YPR132W CYGD:YGR118w
EvolutionaryTrace:P0CX29 NextBio:972878 ArrayExpress:P0CX29
GermOnline:YGR118W Uniprot:P0CX29
Length = 145
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+GIE+KQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>SGD|S000006336 [details] [associations]
symbol:RPS23B "Ribosomal protein 28 (rp28) of the small (40S)
ribosomal subunit, req" species:4932 "Saccharomyces cerevisiae"
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006450 "regulation of translational fidelity"
evidence=IGI;IMP] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 SGD:S000006336 GO:GO:0006412
EMBL:BK006949 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:U40829 RefSeq:NP_011633.3 GeneID:853015
KEGG:sce:YGR118W KO:K02973 GO:GO:0006450 GO:GO:0000462
GO:GO:0022627 KO:K04460 RefSeq:NP_011639.3 GeneID:853023
KEGG:sce:YGR123C PANTHER:PTHR11652 TIGRFAMs:TIGR00982 PIR:A46703
RefSeq:NP_015457.1 EnsemblFungi:YGR118W EnsemblFungi:YPR132W
GeneID:856250 KEGG:sce:YPR132W NextBio:972878 EMBL:M96571
ProteinModelPortal:P0CX30 SMR:P0CX30 PRIDE:P0CX30 CYGD:YPR132w
GeneTree:ENSGT00550000074784 ArrayExpress:P0CX30 GermOnline:YPR132W
Uniprot:P0CX30
Length = 145
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+GIE+KQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>CGD|CAL0000513 [details] [associations]
symbol:RPS23A species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0006450 "regulation of translational fidelity"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AACQ01000038 KO:K02973 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 TIGRFAMs:TIGR00982 RefSeq:XP_718756.1
ProteinModelPortal:Q5AAQ8 SMR:Q5AAQ8 STRING:Q5AAQ8 GeneID:3639647
KEGG:cal:CaO19.13632 CGD:CAL0069976 Uniprot:Q5AAQ8
Length = 145
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEKIGIE+KQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKIGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGR+G A P +
Sbjct: 102 VLLAGFGRRGKAKGDIPGV 120
>UNIPROTKB|E1B8G4 [details] [associations]
symbol:E1B8G4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 EMBL:DAAA02031724 IPI:IPI00704180
Ensembl:ENSBTAT00000043597 OMA:FARPANM NextBio:20870773
Uniprot:E1B8G4
Length = 151
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAK+PN AIRKC RVQ IKNGKKI FV +DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKRPNSAIRKCVRVQRIKNGKKITAFVSNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFG KGHAV P +
Sbjct: 100 VLVAGFGGKGHAVGDIPGV 118
>POMBASE|SPAC23C11.02c [details] [associations]
symbol:rps23 "40S ribosomal protein S23 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 PomBase:SPAC23C11.02c
PomBase:SPBP4H10.13 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0022627 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 OMA:DGAINFI
EMBL:AB001288 PIR:T38240 RefSeq:NP_593633.1 RefSeq:NP_596187.1
ProteinModelPortal:P79057 SMR:P79057 IntAct:P79057 STRING:P79057
EnsemblFungi:SPAC23C11.02c.1 EnsemblFungi:SPBP4H10.13.1
GeneID:2541369 GeneID:2542012 KEGG:spo:SPAC23C11.02c
KEGG:spo:SPBP4H10.13 OrthoDB:EOG4M0JB5 NextBio:20802478
Uniprot:P79057
Length = 143
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 56/79 (70%), Positives = 66/79 (83%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIV+EKIG+EAKQPN AIRKC RVQLIKNGKK+ FVP DGCLN+++END+
Sbjct: 40 PFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPHDGCLNFVDENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL++GFGRKG A P +
Sbjct: 100 VLLSGFGRKGKAKGDIPGV 118
>POMBASE|SPBP4H10.13 [details] [associations]
symbol:rps2302 "40S ribosomal protein S23 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 PomBase:SPAC23C11.02c
PomBase:SPBP4H10.13 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0022627 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 OMA:DGAINFI
EMBL:AB001288 PIR:T38240 RefSeq:NP_593633.1 RefSeq:NP_596187.1
ProteinModelPortal:P79057 SMR:P79057 IntAct:P79057 STRING:P79057
EnsemblFungi:SPAC23C11.02c.1 EnsemblFungi:SPBP4H10.13.1
GeneID:2541369 GeneID:2542012 KEGG:spo:SPAC23C11.02c
KEGG:spo:SPBP4H10.13 OrthoDB:EOG4M0JB5 NextBio:20802478
Uniprot:P79057
Length = 143
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 56/79 (70%), Positives = 66/79 (83%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIV+EKIG+EAKQPN AIRKC RVQLIKNGKK+ FVP DGCLN+++END+
Sbjct: 40 PFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPHDGCLNFVDENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL++GFGRKG A P +
Sbjct: 100 VLLSGFGRKGKAKGDIPGV 118
>GENEDB_PFALCIPARUM|PFC0290w [details] [associations]
symbol:PFC0290w "40S ribosomal protein S23,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL844502
KO:K02973 GO:GO:0015935 PANTHER:PTHR11652 HOGENOM:HOG000040064
TIGRFAMs:TIGR00982 OMA:DGAINFI ProtClustDB:PTZ00067
RefSeq:XP_001351145.1 ProteinModelPortal:O97248 SMR:O97248
PRIDE:O97248 EnsemblProtists:PFC0290w:mRNA GeneID:814387
KEGG:pfa:PFC0290w EuPathDB:PlasmoDB:PF3D7_0306900 Uniprot:O97248
Length = 145
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 56/79 (70%), Positives = 65/79 (82%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIV+EK+ IEAKQPN A RKC RVQLIKNGKKI FVP DGCLN+I+END+
Sbjct: 42 PFRGSSHAKGIVVEKVAIEAKQPNSAYRKCVRVQLIKNGKKITAFVPGDGCLNFIDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL++GFGR GH+V P +
Sbjct: 102 VLVSGFGRSGHSVGDLPGV 120
>DICTYBASE|DDB_G0272250 [details] [associations]
symbol:rps23 "40S ribosomal protein S23"
species:44689 "Dictyostelium discoideum" [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 dictyBase:DDB_G0272250
GO:GO:0006412 GenomeReviews:CM000151_GR GO:GO:0003735
EMBL:AAFI02000008 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 TIGRFAMs:TIGR00982 OMA:DGAINFI RefSeq:XP_645165.1
ProteinModelPortal:Q55A19 SMR:Q55A19 STRING:Q55A19 PRIDE:Q55A19
EnsemblProtists:DDB0231062 GeneID:8618337 KEGG:ddi:DDB_G0272250
ProtClustDB:PTZ00067 Uniprot:Q55A19
Length = 143
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 56/79 (70%), Positives = 64/79 (81%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHA GIV+ ++GIEAKQPN AIRKC RVQL KNGKKI FVP+DGCLNYI+ENDK
Sbjct: 40 PFGGASHASGIVVSRLGIEAKQPNSAIRKCVRVQLKKNGKKITAFVPNDGCLNYIQENDK 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AG GR GH+V P +
Sbjct: 100 VLVAGLGRSGHSVGDIPGV 118
>UNIPROTKB|D6R9I7 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PANTHER:PTHR11652 HOGENOM:HOG000040064 HGNC:HGNC:10410
ChiTaRS:RPS23 EMBL:AC010598 IPI:IPI00968307
ProteinModelPortal:D6R9I7 SMR:D6R9I7 Ensembl:ENST00000507980
ArrayExpress:D6R9I7 Bgee:D6R9I7 Uniprot:D6R9I7
Length = 123
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 46/56 (82%), Positives = 50/56 (89%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIE 56
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IE
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIE 95
>UNIPROTKB|F1RS51 [details] [associations]
symbol:F1RS51 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR006032 Pfam:PF00164
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 PANTHER:PTHR11652
GeneTree:ENSGT00550000074784 EMBL:CU469194
Ensembl:ENSSSCT00000009901 Uniprot:F1RS51
Length = 191
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 44/73 (60%), Positives = 53/73 (72%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G S AK I+LE++ +EAKQ N AIRKC R QL+K KK+ F+ DGCLN+I E D
Sbjct: 98 PFGGISQAKRILLEEVSVEAKQVNSAIRKCFRDQLVKKRKKLTAFISDDGCLNFIAEKDD 157
Query: 61 VLIAGFGRKGHAV 73
VL+AGFG KGH V
Sbjct: 158 VLVAGFGCKGHTV 170
>UNIPROTKB|F1PS88 [details] [associations]
symbol:F1PS88 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PANTHER:PTHR11652 GeneTree:ENSGT00550000074784 EMBL:AAEX03016786
Ensembl:ENSCAFT00000016890 Uniprot:F1PS88
Length = 127
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 45/80 (56%), Positives = 59/80 (73%)
Query: 2 FAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVT--FVPSDGCLNYIEEND 59
F G SHAK I LEK+ ++AKQPN AIRK VQLIKN +K T +P++ CLN+ E+ND
Sbjct: 23 FGGTSHAKEIALEKVRVKAKQPNSAIRKYVTVQLIKNVQKNKTKPLIPNNVCLNFTEKND 82
Query: 60 KVLIAGFGRKGHAVATSPPI 79
+VL+ GFG KGHAV+ +P +
Sbjct: 83 EVLVTGFGHKGHAVSDTPGV 102
>UNIPROTKB|D6RIX0 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PANTHER:PTHR11652 HOGENOM:HOG000040064 HGNC:HGNC:10410
ChiTaRS:RPS23 EMBL:AC010598 IPI:IPI00966370
ProteinModelPortal:D6RIX0 SMR:D6RIX0 Ensembl:ENST00000510019
ArrayExpress:D6RIX0 Bgee:D6RIX0 Uniprot:D6RIX0
Length = 85
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 35/41 (85%), Positives = 37/41 (90%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKK 41
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKK
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 80
>UNIPROTKB|H9L236 [details] [associations]
symbol:MRPS12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00981
GeneTree:ENSGT00550000075103 OMA:LNQMHRQ EMBL:AADN02036685
Ensembl:ENSGALT00000035751 Uniprot:H9L236
Length = 110
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G KG+V+ + + K+PN A RKC RV+L NG+++V FVP +G + ++E+
Sbjct: 22 PTFGRPQLKGVVVRNLIRKPKKPNSANRKCVRVRL-SNGREVVCFVPGEG--HNLQEHHV 78
Query: 61 VLIAGFGR 68
VL+ G GR
Sbjct: 79 VLVQG-GR 85
>UNIPROTKB|E2RE10 [details] [associations]
symbol:MRPS12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005679 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
TIGRFAMs:TIGR00981 CTD:6183 GeneTree:ENSGT00550000075103
OMA:LNQMHRQ EMBL:AAEX03000966 RefSeq:XP_541631.3
ProteinModelPortal:E2RE10 Ensembl:ENSCAFT00000009045 GeneID:484517
KEGG:cfa:484517 NextBio:20858647 Uniprot:E2RE10
Length = 139
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P AG KG+VL + K+PN A RKC RV+L G++ V F+P +G + ++E+
Sbjct: 51 PTAGRPQLKGVVLRTFIRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HSLQEHHV 107
Query: 61 VLIAGFGR 68
VL+ G GR
Sbjct: 108 VLVQG-GR 114
>MGI|MGI:1346333 [details] [associations]
symbol:Mrps12 "mitochondrial ribosomal protein S12"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR005679
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
PROSITE:PS00055 MGI:MGI:1346333 GO:GO:0005739 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
HOGENOM:HOG000040063 CTD:6183 GeneTree:ENSGT00550000075103
HOVERGEN:HBG001525 OMA:LNQMHRQ OrthoDB:EOG4MGS8W EMBL:Y11682
EMBL:BC012679 EMBL:BC027522 IPI:IPI00132932 RefSeq:NP_036015.1
UniGene:Mm.358650 ProteinModelPortal:O35680 SMR:O35680
STRING:O35680 PhosphoSite:O35680 PaxDb:O35680 PRIDE:O35680
Ensembl:ENSMUST00000056078 Ensembl:ENSMUST00000171183 GeneID:24030
KEGG:mmu:24030 UCSC:uc009fzo.1 InParanoid:O35680 NextBio:303963
Bgee:O35680 CleanEx:MM_MRPS12 Genevestigator:O35680
GermOnline:ENSMUSG00000045948 Uniprot:O35680
Length = 139
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G KG+VL + K+PN A RKC RV+L GK+ V F+P +G + ++E+
Sbjct: 51 PTEGRPQLKGVVLRTFIRKPKKPNSANRKCCRVRL-STGKEAVCFIPGEG--HTLQEHHV 107
Query: 61 VLIAGFGR 68
VL+ G GR
Sbjct: 108 VLVEG-GR 114
>RGD|1306221 [details] [associations]
symbol:Mrps12 "mitochondrial ribosomal protein S12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 RGD:1306221
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473979 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 CTD:6183
GeneTree:ENSGT00550000075103 OMA:LNQMHRQ OrthoDB:EOG4MGS8W
IPI:IPI00197829 RefSeq:NP_001099709.1 UniGene:Rn.8526
Ensembl:ENSRNOT00000027029 GeneID:292758 KEGG:rno:292758
NextBio:634698 Uniprot:D3ZQX3
Length = 139
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G KG+VL + K+PN A RKC RV+L GK+ V F+P +G + ++E+
Sbjct: 51 PTEGRPQLKGVVLRTFIRKPKKPNSANRKCCRVRL-STGKEAVCFIPGEG--HTLQEHHV 107
Query: 61 VLIAGFGR 68
VL+ G GR
Sbjct: 108 VLVEG-GR 114
>WB|WBGene00011391 [details] [associations]
symbol:mrps-12 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
EMBL:Z92838 PANTHER:PTHR11652 eggNOG:COG0048 HOGENOM:HOG000040063
GeneTree:ENSGT00550000075103 PIR:T24380 RefSeq:NP_508023.1
ProteinModelPortal:Q9XTY5 SMR:Q9XTY5 STRING:Q9XTY5 PaxDb:Q9XTY5
EnsemblMetazoa:T03D8.2.1 EnsemblMetazoa:T03D8.2.2 GeneID:180368
KEGG:cel:CELE_T03D8.2 UCSC:T03D8.2 CTD:180368 WormBase:T03D8.2
InParanoid:Q9XTY5 OMA:ISVKANI NextBio:909068 Uniprot:Q9XTY5
Length = 157
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 3 AGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDKVL 62
+G SH KGIVL+ + K+PN RKC+ V+L G ++ ++P+ G + ++E+ +VL
Sbjct: 71 SGYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVL 127
Query: 63 IAGFGRKGHAVATSPPII 80
+ G GR+ ++ I+
Sbjct: 128 VKG-GRRRDLISVKANIV 144
>UNIPROTKB|Q29RU1 [details] [associations]
symbol:MRPS12 "28S ribosomal protein S12, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005679 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 HOGENOM:HOG000040063
EMBL:BC114019 IPI:IPI00697120 RefSeq:NP_001070569.1
UniGene:Bt.59090 STRING:Q29RU1 PRIDE:Q29RU1
Ensembl:ENSBTAT00000002335 GeneID:768042 KEGG:bta:768042 CTD:6183
GeneTree:ENSGT00550000075103 HOVERGEN:HBG001525 InParanoid:Q29RU1
OMA:LNQMHRQ OrthoDB:EOG4MGS8W NextBio:20918397 Uniprot:Q29RU1
Length = 139
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G KG+VL + K+PN A RKC RV+L G++ V F+P +G + ++E+
Sbjct: 51 PTEGRPQLKGVVLRTFIRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HNLQEHHV 107
Query: 61 VLIAGFGR 68
VL+ G GR
Sbjct: 108 VLVQG-GR 114
>CGD|CAL0001528 [details] [associations]
symbol:orf19.2438 species:5476 "Candida albicans" [GO:0005840
"ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 CGD:CAL0001528
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
HOGENOM:HOG000040063 RefSeq:XP_718461.1 RefSeq:XP_718544.1
ProteinModelPortal:Q5AA46 SMR:Q5AA46 STRING:Q5AA46 GeneID:3639816
GeneID:3639824 KEGG:cal:CaO19.2438 KEGG:cal:CaO19.9974
Uniprot:Q5AA46
Length = 180
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 9 KGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDKVLIAGFGR 68
KG+VL + ++ K+PN A+RKC+RV+L NG I +P +G + ++E+ VL+ G GR
Sbjct: 87 KGVVLRIMILKPKKPNSALRKCARVRLT-NGNVISALIPGEG--HNLQEHHVVLVRG-GR 142
>UNIPROTKB|O15235 [details] [associations]
symbol:MRPS12 "28S ribosomal protein S12, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0005761
"mitochondrial ribosome" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR005679 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
GO:GO:0006412 EMBL:CH471126 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005761 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
HOGENOM:HOG000040063 CTD:6183 HOVERGEN:HBG001525 OMA:LNQMHRQ
OrthoDB:EOG4MGS8W EMBL:Y11681 EMBL:AF058761 EMBL:CR407609
EMBL:BC001617 EMBL:BC006424 EMBL:BC007499 IPI:IPI00005692
RefSeq:NP_066930.1 RefSeq:NP_203526.1 RefSeq:NP_203527.1
UniGene:Hs.411125 ProteinModelPortal:O15235 SMR:O15235
IntAct:O15235 MINT:MINT-1373561 STRING:O15235 PhosphoSite:O15235
PaxDb:O15235 PeptideAtlas:O15235 PRIDE:O15235 DNASU:6183
Ensembl:ENST00000308018 Ensembl:ENST00000402029
Ensembl:ENST00000407800 GeneID:6183 KEGG:hsa:6183 UCSC:uc002okc.3
GeneCards:GC19P039422 HGNC:HGNC:10380 HPA:HPA046775 HPA:HPA050633
MIM:603021 neXtProt:NX_O15235 PharmGKB:PA30996 InParanoid:O15235
PhylomeDB:O15235 GenomeRNAi:6183 NextBio:24009 Bgee:O15235
CleanEx:HS_MRPS12 Genevestigator:O15235 GermOnline:ENSG00000128626
Uniprot:O15235
Length = 138
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G KG+VL + K+PN A RKC RV+L G++ V F+P +G + ++E+
Sbjct: 51 PTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQI 107
Query: 61 VLIAGFGR 68
VL+ G GR
Sbjct: 108 VLVEG-GR 114
>ZFIN|ZDB-GENE-091204-48 [details] [associations]
symbol:si:dkey-17e16.10 "si:dkey-17e16.10"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
ZFIN:ZDB-GENE-091204-48 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 GeneTree:ENSGT00550000075103
EMBL:CR388166 IPI:IPI00995277 RefSeq:XP_003200900.1
Ensembl:ENSDART00000122505 Ensembl:ENSDART00000144917
GeneID:100537619 KEGG:dre:100537619 Uniprot:E7F8G8
Length = 143
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 4 GPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDKVLI 63
G K +VL+ + + K+PN A RKC++V+L NG++ V ++P +G + ++E++ VL+
Sbjct: 57 GHPQLKAVVLKTMIRKPKKPNSANRKCAQVRL-SNGQEAVVYIPGEG--HNLQEHNVVLV 113
Query: 64 AGFGR 68
G GR
Sbjct: 114 QG-GR 117
>FB|FBgn0003714 [details] [associations]
symbol:tko "technical knockout" species:7227 "Drosophila
melanogaster" [GO:0007638 "mechanosensory behavior" evidence=IMP]
[GO:0009612 "response to mechanical stimulus" evidence=IMP]
[GO:0006412 "translation" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0008049 "male courtship
behavior" evidence=IMP] [GO:0007619 "courtship behavior"
evidence=TAS] [GO:0001666 "response to hypoxia" evidence=IDA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
EMBL:AE014298 GO:GO:0001666 GO:GO:0007605 GO:GO:0003735
GO:GO:0008049 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0005763 GO:GO:0007638 PANTHER:PTHR11652 TIGRFAMs:TIGR00981
eggNOG:COG0048 GeneTree:ENSGT00550000075103 OMA:LNQMHRQ EMBL:M19494
EMBL:AJ250320 EMBL:AL133505 EMBL:BT015958 PIR:A29622
RefSeq:NP_001245490.1 RefSeq:NP_525050.1 UniGene:Dm.1694
ProteinModelPortal:P10735 SMR:P10735 DIP:DIP-22123N
MINT:MINT-760161 STRING:P10735 PaxDb:P10735 PRIDE:P10735
EnsemblMetazoa:FBtr0070459 GeneID:31228 KEGG:dme:Dmel_CG7925
CTD:31228 FlyBase:FBgn0003714 InParanoid:P10735 OrthoDB:EOG4PC88F
PhylomeDB:P10735 GenomeRNAi:31228 NextBio:772558 Bgee:P10735
GermOnline:CG7925 Uniprot:P10735
Length = 140
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G AKG+VL+ + + K+PN A RKC V+L GK++V ++P G + ++E++
Sbjct: 51 PLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG--HNLQEHNI 107
Query: 61 VL 62
VL
Sbjct: 108 VL 109
>TIGR_CMR|APH_1035 [details] [associations]
symbol:APH_1035 "ribosomal protein S12" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 RefSeq:YP_505593.1
ProteinModelPortal:Q2GJ58 SMR:Q2GJ58 STRING:Q2GJ58 GeneID:3930709
KEGG:aph:APH_1035 PATRIC:20950820 HOGENOM:HOG000040063 OMA:SCPERRG
ProtClustDB:PRK05163 BioCyc:APHA212042:GHPM-1041-MONOMER
Uniprot:Q2GJ58
Length = 124
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 21 KQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDKVLIAGFGR 68
K+PN A+RK +RV++ G +++ ++P +G + ++E+ VLI G GR
Sbjct: 43 KKPNSALRKVARVRIAGYGSEVIAYIPGEG--HNLQEHSVVLIRG-GR 87
>TIGR_CMR|ECH_0963 [details] [associations]
symbol:ECH_0963 "ribosomal protein S12" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_507750.1
ProteinModelPortal:Q2GFN3 SMR:Q2GFN3 STRING:Q2GFN3 PRIDE:Q2GFN3
GeneID:3927553 KEGG:ech:ECH_0963 PATRIC:20577308
BioCyc:ECHA205920:GJNR-966-MONOMER Uniprot:Q2GFN3
Length = 123
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 17/48 (35%), Positives = 33/48 (68%)
Query: 21 KQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDKVLIAGFGR 68
K+PN A+RK +RV++ G +++ ++P +G + ++E+ +LI G GR
Sbjct: 43 KKPNSALRKVARVKIAGYGSEVIAYIPGEG--HNLQEHSVILIRG-GR 87
>SGD|S000005319 [details] [associations]
symbol:MRPS12 "Mitochondrial protein" species:4932
"Saccharomyces cerevisiae" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=ISA] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 SGD:S000005319
EMBL:BK006947 GO:GO:0003735 GO:GO:0032543 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005763 PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 HOGENOM:HOG000040063 OMA:SCPERRG
GeneTree:ENSGT00550000075103 OrthoDB:EOG4CZFRD EMBL:Z71651
EMBL:AY558003 PIR:S63367 RefSeq:NP_014434.1
ProteinModelPortal:P53732 SMR:P53732 DIP:DIP-5562N IntAct:P53732
MINT:MINT-574668 STRING:P53732 PaxDb:P53732 PeptideAtlas:P53732
EnsemblFungi:YNR036C GeneID:855772 KEGG:sce:YNR036C CYGD:YNR036c
NextBio:980226 Genevestigator:P53732 GermOnline:YNR036C
Uniprot:P53732
Length = 153
Score = 87 (35.7 bits), Expect = 0.00047, P = 0.00047
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 9 KGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDKVLIAGFGR 68
KG+VL + ++ K+PN A RK RV+L NG + ++P +G + +E+ V + G GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRLT-NGNVVSAYIPGEG--HDAQEHSIVYVRG-GR 114
>ASPGD|ASPL0000075253 [details] [associations]
symbol:AN4730 species:162425 "Emericella nidulans"
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR005679
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
GO:GO:0006412 GO:GO:0003735 EMBL:BN001303 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
TIGRFAMs:TIGR00981 HOGENOM:HOG000040063
EnsemblFungi:CADANIAT00005699 OMA:LENCPER Uniprot:C8VAU5
Length = 96
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 9 KGIVLEKIGI-EAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDKVLIAGFG 67
KG+ + K GI + K+PN RK +RV+L +GK + ++P +G + ++++ VL+ G G
Sbjct: 2 KGVCM-KTGITKPKKPNSGERKTARVRL-SSGKVVTAYIPGEG--HNVQQHSVVLVRG-G 56
Query: 68 R 68
R
Sbjct: 57 R 57
>TIGR_CMR|DET_0470 [details] [associations]
symbol:DET_0470 "ribosomal protein S12" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_181214.1
ProteinModelPortal:Q3Z985 SMR:Q3Z985 STRING:Q3Z985 PRIDE:Q3Z985
GeneID:3230165 KEGG:det:DET0470 PATRIC:21608009
BioCyc:DETH243164:GJNF-470-MONOMER Uniprot:Q3Z985
Length = 144
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 4 GPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDKVLI 63
G +G+ + K+PN A+RK +RV+L N ++ ++P +G + ++E+ VLI
Sbjct: 40 GSPQKRGVCTQVKTTTPKKPNSALRKIARVRL-SNHMEVTAYIPGEG--HNLQEHSVVLI 96
Query: 64 AGFGR 68
G GR
Sbjct: 97 RG-GR 100
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.140 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 87 87 0.00091 102 3 11 22 0.46 29
29 0.48 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 472 (50 KB)
Total size of DFA: 92 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.59u 0.11s 9.70t Elapsed: 00:00:00
Total cpu time: 9.59u 0.11s 9.70t Elapsed: 00:00:00
Start: Fri May 10 03:46:59 2013 End: Fri May 10 03:46:59 2013