BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042342
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23 OS=Euphorbia esula GN=RPS23 PE=2 SV=1
Length = 142
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 71/79 (89%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PFAG SHAKGIVLEKIGIEAKQPN AIRKC+RVQLIKNGKKI FVP+DGCLNYIEEND+
Sbjct: 39 PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDE 98
Query: 61 VLIAGFGRKGHAVATSPPI 79
VLIAGFGRKGHAV P +
Sbjct: 99 VLIAGFGRKGHAVGDIPGV 117
>sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1
Length = 142
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 71/79 (89%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PFAG SHAKGIVLEKIGIEAKQPN AIRKC+RVQLIKNGKKI FVP+DGCLNYIEEND+
Sbjct: 39 PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDE 98
Query: 61 VLIAGFGRKGHAVATSPPI 79
VLIAGFGRKGHAV P +
Sbjct: 99 VLIAGFGRKGHAVGDIPGV 117
>sp|P49201|RS232_ARATH 40S ribosomal protein S23-2 OS=Arabidopsis thaliana GN=RPS23B PE=2
SV=2
Length = 142
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 71/79 (89%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PFAG SHAKGIVLEKIGIEAKQPN AIRKC+RVQLIKNGKKI FVP+DGCLNYIEEND+
Sbjct: 39 PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDE 98
Query: 61 VLIAGFGRKGHAVATSPPI 79
VLIAGFGRKGHAV P +
Sbjct: 99 VLIAGFGRKGHAVGDIPGV 117
>sp|Q9SF35|RS231_ARATH 40S ribosomal protein S23-1 OS=Arabidopsis thaliana GN=RPS23A PE=2
SV=2
Length = 142
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/79 (83%), Positives = 70/79 (88%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PFA SHAKGIVLEKIGIEAKQPN AIRKC+RVQLIKNGKKI FVP+DGCLNYIEEND+
Sbjct: 39 PFACSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDE 98
Query: 61 VLIAGFGRKGHAVATSPPI 79
VLIAGFGRKGHAV P +
Sbjct: 99 VLIAGFGRKGHAVGDIPGV 117
>sp|Q86FP7|RS23_DERVA 40S ribosomal protein S23 OS=Dermacentor variabilis GN=RpS23 PE=2
SV=1
Length = 143
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 68/79 (86%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP DGCLNYIEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|P62268|RS23_RAT 40S ribosomal protein S23 OS=Rattus norvegicus GN=Rps23 PE=1 SV=3
Length = 143
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|P62267|RS23_MOUSE 40S ribosomal protein S23 OS=Mus musculus GN=Rps23 PE=2 SV=3
Length = 143
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|P62266|RS23_HUMAN 40S ribosomal protein S23 OS=Homo sapiens GN=RPS23 PE=1 SV=3
Length = 143
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|P62298|RS23_CHILA 40S ribosomal protein S23 OS=Chinchilla lanigera GN=RPS23 PE=2 SV=1
Length = 143
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|Q3T199|RS23_BOVIN 40S ribosomal protein S23 OS=Bos taurus GN=RPS23 PE=2 SV=1
Length = 143
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|Q6SA96|RS23_PIG 40S ribosomal protein S23 OS=Sus scrofa GN=RPS23 PE=2 SV=3
Length = 143
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|Q90YQ1|RS23_ICTPU 40S ribosomal protein S23 OS=Ictalurus punctatus GN=rps23 PE=2 SV=1
Length = 143
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 69/79 (87%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|Q8I7D5|RS23_CIOIN 40S ribosomal protein S23 OS=Ciona intestinalis GN=RPS23 PE=2 SV=1
Length = 143
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 68/79 (86%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEKIG+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLNYIEEND+
Sbjct: 40 PFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNYIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGR GHAV P +
Sbjct: 100 VLVAGFGRSGHAVGDIPGV 118
>sp|Q9GRJ3|RS23_LUMRU 40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1
Length = 143
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 68/79 (86%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|Q962Q7|RS23_SPOFR 40S ribosomal protein S23 OS=Spodoptera frugiperda GN=RpS23 PE=2
SV=1
Length = 143
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKK+ FVP DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|Q6EV23|RS23_PAPDA 40S ribosomal protein S23 OS=Papilio dardanus GN=RpS23 PE=2 SV=1
Length = 143
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKK+ FVP DGCLN+IEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|Q8T3U2|RS23_DROME 40S ribosomal protein S23 OS=Drosophila melanogaster GN=RpS23 PE=2
SV=1
Length = 143
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP DG LNYIEEND+
Sbjct: 40 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|P90707|RS23_BRUMA 40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1
Length = 143
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+IEEND+
Sbjct: 40 PFGTASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKGHAV P +
Sbjct: 100 VLVAGFGRKGHAVGDIPGV 118
>sp|Q19877|RS23_CAEEL 40S ribosomal protein S23 OS=Caenorhabditis elegans GN=rps-23 PE=3
SV=1
Length = 143
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 68/79 (86%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEKIG+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN++EEND+
Sbjct: 40 PFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL++GFGR GHAV P +
Sbjct: 100 VLVSGFGRSGHAVGDIPGV 118
>sp|Q9DFR4|RS23_GILMI 40S ribosomal protein S23 OS=Gillichthys mirabilis GN=rps23 PE=2
SV=1
Length = 143
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKKI FVP+DGCLN+ EEND+
Sbjct: 40 PFGSASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFXEENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRK HAV P +
Sbjct: 100 VLVAGFGRKXHAVGDIPGV 118
>sp|Q9HE74|RS23_NEUCR 40S ribosomal protein S23 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-23
PE=3 SV=1
Length = 145
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>sp|Q6YIA3|RS23_SACBA 40S ribosomal protein S23 OS=Saccharomyces bayanus GN=RPS23A PE=3
SV=1
Length = 145
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+GIE+KQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>sp|Q6FLA8|RS23_CANGA 40S ribosomal protein S23 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPS23
PE=3 SV=1
Length = 145
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+GIE+KQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>sp|P0CX30|RS23B_YEAST 40S ribosomal protein S23-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS23B PE=1 SV=1
Length = 145
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+GIE+KQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>sp|P0CY40|RS23B_NAUCC 40S ribosomal protein S23-B OS=Naumovozyma castellii (strain ATCC
76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=RPS23B
PE=3 SV=1
Length = 145
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+GIE+KQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>sp|P0CX29|RS23A_YEAST 40S ribosomal protein S23-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS23A PE=1 SV=1
Length = 145
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+GIE+KQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>sp|P0CY39|RS23A_NAUCC 40S ribosomal protein S23-A OS=Naumovozyma castellii (strain ATCC
76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=RPS23A
PE=3 SV=1
Length = 145
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+GIE+KQPN AIRKC RVQLIKNGKK+ FVP+DGCLN+++END+
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>sp|Q873W8|RS23_ASPFU 40S ribosomal protein S23 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rps23
PE=2 SV=1
Length = 145
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIVLEK+G+EAKQPN AIRKC +VQLIKNGKK+ FVP+DGCLN+I+END+
Sbjct: 42 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVKVQLIKNGKKVTAFVPNDGCLNFIDENDE 101
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AGFGRKG A P +
Sbjct: 102 VLLAGFGRKGKAKGDIPGV 120
>sp|P79057|RS23_SCHPO 40S ribosomal protein S23 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps23a PE=2 SV=2
Length = 143
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKGIV+EKIG+EAKQPN AIRKC RVQLIKNGKK+ FVP DGCLN+++END+
Sbjct: 40 PFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPHDGCLNFVDENDE 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL++GFGRKG A P +
Sbjct: 100 VLLSGFGRKGKAKGDIPGV 118
>sp|Q55A19|RS23_DICDI 40S ribosomal protein S23 OS=Dictyostelium discoideum GN=rps23 PE=3
SV=1
Length = 143
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 64/79 (81%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHA GIV+ ++GIEAKQPN AIRKC RVQL KNGKKI FVP+DGCLNYI+ENDK
Sbjct: 40 PFGGASHASGIVVSRLGIEAKQPNSAIRKCVRVQLKKNGKKITAFVPNDGCLNYIQENDK 99
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AG GR GH+V P +
Sbjct: 100 VLVAGLGRSGHSVGDIPGV 118
>sp|P06147|RS12_TETTH 40S ribosomal protein S12 OS=Tetrahymena thermophila PE=1 SV=1
Length = 142
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
PF G SHAKG+V EKIGIE+KQPN A+RKC RV L KN KKI FVP DGCLN++ END+
Sbjct: 41 PFMGASHAKGLVTEKIGIESKQPNSAVRKCVRVLLRKNSKKIAAFVPMDGCLNFLAENDE 100
Query: 61 VLIAGFGRKGHAVATSPPI 79
VL+AG GR+GHAV P +
Sbjct: 101 VLVAGLGRQGHAVGDIPGV 119
>sp|Q8TXJ2|RS12_METKA 30S ribosomal protein S12 OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps12 PE=3 SV=1
Length = 147
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G A+GIVLEK+G+EAKQPN AIRKC RVQLIKNGK++ F P DG ++YI+E+D+
Sbjct: 43 PLEGAPQARGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAIDYIDEHDE 102
Query: 61 VLIAGFGR-KGHAVATSP 77
V+I G G KG A P
Sbjct: 103 VVIEGIGGPKGRAKGDIP 120
>sp|A0RUR2|RS12_CENSY 30S ribosomal protein S12 OS=Cenarchaeum symbiosum (strain A)
GN=rps12 PE=3 SV=1
Length = 145
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G A+GIVLEK+G+EAKQPN A+RKC RVQLIKNGK I F+P DG +N+I+E+D+
Sbjct: 41 PMGGSPQARGIVLEKVGVEAKQPNSAVRKCVRVQLIKNGKSITAFLPRDGAMNFIDEHDE 100
Query: 61 VLIAGFG 67
V + G G
Sbjct: 101 VHVEGMG 107
>sp|Q8SR65|RS23_ENCCU 40S ribosomal protein S23 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS23 PE=1 SV=1
Length = 140
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 52/73 (71%)
Query: 7 HAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDKVLIAGF 66
AK IVLEKIG+EAKQPN AIRK R QLI GKKI FVP DG + YIE ND+V + GF
Sbjct: 43 QAKAIVLEKIGVEAKQPNSAIRKAVRCQLIATGKKITAFVPYDGSVTYIESNDEVTVEGF 102
Query: 67 GRKGHAVATSPPI 79
G+KG +V P I
Sbjct: 103 GKKGRSVGDIPGI 115
>sp|P0CX00|RS12_HALSA 30S ribosomal protein S12 OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps12 PE=3 SV=1
Length = 142
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G +GIVLEK+GIEAKQPN AIRKC RVQLIKNGK++ F P DG +++I+E+D+
Sbjct: 38 PLEGAPQGRGIVLEKVGIEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAISFIDEHDE 97
Query: 61 VLIAGF-GRKGHAVA 74
V IAG G KG A+
Sbjct: 98 VTIAGIGGAKGRAMG 112
>sp|B0R8D1|RS12_HALS3 30S ribosomal protein S12 OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps12 PE=3 SV=1
Length = 142
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G +GIVLEK+GIEAKQPN AIRKC RVQLIKNGK++ F P DG +++I+E+D+
Sbjct: 38 PLEGAPQGRGIVLEKVGIEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAISFIDEHDE 97
Query: 61 VLIAGF-GRKGHAVA 74
V IAG G KG A+
Sbjct: 98 VTIAGIGGAKGRAMG 112
>sp|Q18EX9|RS12_HALWD 30S ribosomal protein S12 OS=Haloquadratum walsbyi (strain DSM
16790) GN=rps12 PE=3 SV=1
Length = 142
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G +GIVLEK+GIEAKQPN AIRKC RVQLIKNGK++ F P DG +++I+E+D+
Sbjct: 38 PLEGAPQGRGIVLEKVGIEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAISFIDEHDE 97
Query: 61 VLIAGF-GRKGHAV 73
V IAG G KG A+
Sbjct: 98 VTIAGIGGAKGRAM 111
>sp|Q0W8G5|RS12_UNCMA 30S ribosomal protein S12 OS=Uncultured methanogenic archaeon RC-I
GN=rps12 PE=3 SV=1
Length = 142
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G AKGIVLEK+G+EAKQPN AIRKC R+QLIKNG++I F P DG +N+I+E+D+
Sbjct: 38 PLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQITAFCPGDGAINFIDEHDE 97
Query: 61 VLIAGF-GRKGHAVATSPPI 79
V I G GR G + P +
Sbjct: 98 VTIEGIGGRMGGSYGDIPGV 117
>sp|Q3IUM8|RS12_NATPD 30S ribosomal protein S12 OS=Natronomonas pharaonis (strain DSM
2160 / ATCC 35678) GN=rps12 PE=3 SV=1
Length = 142
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G +GIVLEK+GIEAKQPN AIRKC RVQLIKNGK++ F P DG +++I+E+D+
Sbjct: 38 PLEGAPQGRGIVLEKVGIEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAISFIDEHDE 97
Query: 61 VLIAGF-GRKGHAV 73
V IAG G KG A+
Sbjct: 98 VTIAGIGGAKGRAM 111
>sp|Q2NEK8|RS12_METST 30S ribosomal protein S12 OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps12 PE=3 SV=1
Length = 141
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 52/67 (77%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G A+GIV+EK+GIEAKQPN AIRKC RVQLIKNGK+I F P DG + +I+E+D+
Sbjct: 37 PLEGSPQARGIVIEKVGIEAKQPNSAIRKCVRVQLIKNGKQITAFAPGDGAIGFIDEHDE 96
Query: 61 VLIAGFG 67
V+I G G
Sbjct: 97 VMIEGIG 103
>sp|Q5UZR8|RS12_HALMA 30S ribosomal protein S12 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps12 PE=3
SV=1
Length = 142
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G +GIVLEK+GIEAKQPN AIRKC RVQLIKNGK++ F P DG +++I+E+D+
Sbjct: 38 PLEGAPQGRGIVLEKVGIEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAISFIDEHDE 97
Query: 61 VLIAGF-GRKGHAVA 74
V IAG G KG A+
Sbjct: 98 VTIAGIGGAKGRAMG 112
>sp|A5ULM8|RS12_METS3 30S ribosomal protein S12 OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rps12 PE=3 SV=1
Length = 141
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G A+GIV+EK+GIEAKQPN AIRKC RVQLIKNGK++ F P DG + +I+E+D+
Sbjct: 37 PLEGAPQARGIVIEKVGIEAKQPNSAIRKCVRVQLIKNGKQLTAFAPGDGAIGFIDEHDE 96
Query: 61 VLIAGFG 67
V+I G G
Sbjct: 97 VMIEGIG 103
>sp|O27129|RS12_METTH 30S ribosomal protein S12 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps12 PE=3 SV=1
Length = 141
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G A+GIV+EK+GIEAKQPN AIRKC RVQLIKNGK+I F P DG + +I+E+D+
Sbjct: 37 PLEGAPQARGIVIEKVGIEAKQPNSAIRKCVRVQLIKNGKQITAFAPGDGAIGFIDEHDE 96
Query: 61 VLIAGFG 67
V++ G G
Sbjct: 97 VVVEGIG 103
>sp|Q6L0R4|RS12_PICTO 30S ribosomal protein S12 OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps12
PE=3 SV=1
Length = 142
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G AKGIV+EK+GIEAKQPN IRKC ++QLIKNG+++ F P DG +NYI+E+D+
Sbjct: 38 PLEGAPQAKGIVIEKVGIEAKQPNSGIRKCVKIQLIKNGRQLSAFAPGDGAINYIDEHDE 97
Query: 61 VLIAGF-GRKGHAVATSPPI 79
V++ G GR G + P +
Sbjct: 98 VVVEGIGGRMGRSKGDIPGV 117
>sp|A7I4X6|RS12_METB6 30S ribosomal protein S12 OS=Methanoregula boonei (strain 6A8)
GN=rps12 PE=3 SV=1
Length = 142
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G A+GIVLEK+G+EAKQPN AIRKC RVQLIKNG+++ F DG +N+I+E+D+
Sbjct: 38 PLEGAPQARGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGRQVTAFAVGDGAINFIDEHDE 97
Query: 61 VLIAGF-GRKGHAVATSPPI 79
V I G GR G ++ P +
Sbjct: 98 VEIEGIGGRLGRSMGDIPGV 117
>sp|A3DMP8|RS12_STAMF 30S ribosomal protein S12 OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rps12 PE=3 SV=1
Length = 147
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G A+GIVLEK+G+EA+QPN A+RKC RVQL KNGK + FVP DG +NYI+E+D+
Sbjct: 43 PLEGAPMARGIVLEKVGVEARQPNSAVRKCVRVQLAKNGKVVTAFVPFDGGINYIDEHDE 102
Query: 61 VLIAGFG 67
V+I G G
Sbjct: 103 VIIEGIG 109
>sp|P39573|RS12_SULSO 30S ribosomal protein S12 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps12 PE=3 SV=2
Length = 147
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G A+GIVLEK+GIE++QPN A+RKC RVQL++NG+ + FVP DG +N+I+E+D+
Sbjct: 43 PLGGAPMARGIVLEKVGIESRQPNSAVRKCVRVQLVRNGRVVTAFVPGDGGVNFIDEHDE 102
Query: 61 VLIAGFG 67
V+I G G
Sbjct: 103 VIITGIG 109
>sp|Q8TRC1|RS12_METAC 30S ribosomal protein S12 OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rps12 PE=3
SV=1
Length = 142
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G +GIVLEK+G+EAKQPN AIRKC RVQLIKNG+++ F P DG +N+I+E+D+
Sbjct: 38 PLGGAPQGRGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGRQVTAFCPGDGAVNFIDEHDE 97
Query: 61 VLIAGF-GRKGHAVATSPPI 79
V + GR G A+ P +
Sbjct: 98 VTVEKIGGRMGGAMGDIPGV 117
>sp|Q97CD8|RS12_THEVO 30S ribosomal protein S12 OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rps12 PE=3 SV=1
Length = 142
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G AKGI +EK+GIEAKQPN AIRKC +VQLIKNG++I F DG +NYI+E+D+
Sbjct: 38 PLEGAPQAKGIAIEKVGIEAKQPNSAIRKCVKVQLIKNGRQITAFAVGDGAINYIDEHDE 97
Query: 61 VLIAGF-GRKGHAVATSPPI 79
V + G GR G + P +
Sbjct: 98 VTVEGIGGRMGRSKGDIPGV 117
>sp|Q9HLY2|RS12_THEAC 30S ribosomal protein S12 OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rps12 PE=3 SV=1
Length = 142
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 1 PFAGPSHAKGIVLEKIGIEAKQPNFAIRKCSRVQLIKNGKKIVTFVPSDGCLNYIEENDK 60
P G AKGI +EK+GIEAKQPN AIRKC +VQLIKNG++I F DG +NYI+E+D+
Sbjct: 38 PLEGAPQAKGIAIEKVGIEAKQPNSAIRKCVKVQLIKNGRQITAFAVGDGAINYIDEHDE 97
Query: 61 VLIAGF-GRKGHAVATSPPI 79
V + G GR G + P +
Sbjct: 98 VTVEGIGGRMGRSKGDIPGV 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,588,745
Number of Sequences: 539616
Number of extensions: 1184281
Number of successful extensions: 4413
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 886
Number of HSP's that attempted gapping in prelim test: 4306
Number of HSP's gapped (non-prelim): 979
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)