BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042348
(686 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 159/300 (53%), Gaps = 36/300 (12%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVSLRAYF 432
+LG+ G VYK L + VAV+RL Q + +FQTE E I H N++ LR +
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ E+LL+Y Y+ NGS+A+ + + S PL W R RI G A+G+A+LH+ +
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRERPE--SQPPLDWPKRQRIALGSARGLAYLHDHCDPK 162
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++ +NILL + E + DFGLA+L D + H + GT
Sbjct: 163 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK----DXHVXXAVRGT------------ 206
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK--LPMIQIGS-MELNIVQWI 609
+ APE K ++K D++ YGV+LLE+I+G+ + ++ + ++ ++ W+
Sbjct: 207 ------IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 610 QLILEDRKPMTDILDPFLAHDLD---KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666
+ +L+++K L+ + DL K++E+ ++++AL C SP +RP M V L+
Sbjct: 261 KGLLKEKK-----LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 158/300 (52%), Gaps = 36/300 (12%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVSLRAYF 432
+LG+ G VYK L + VAV+RL Q + +FQTE E I H N++ LR +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ E+LL+Y Y+ NGS+A+ + + S PL W R RI G A+G+A+LH+ +
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPE--SQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++ +NILL + E + DFGLA+L D + H + G
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDY----KDXHVXXAVRGX------------ 198
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK--LPMIQIGS-MELNIVQWI 609
+ APE K ++K D++ YGV+LLE+I+G+ + ++ + ++ ++ W+
Sbjct: 199 ------IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 610 QLILEDRKPMTDILDPFLAHDLD---KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666
+ +L+++K L+ + DL K++E+ ++++AL C SP +RP M V L+
Sbjct: 253 KGLLKEKK-----LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 150/301 (49%), Gaps = 36/301 (11%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN----GGWQRFKEFQTEAEAIGKIRHPNIVSLRA 430
+G+ G+VYK +NN VAV++L + ++F E + + K +H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
+ D+ L+Y Y+PNGSL + G PLSW R +I +G A GI FLHE
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHE--- 151
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
++H D++ +NILL + ISDFGLAR +E+ + GT
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQTVMXSRIVGT---------- 198
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
+ Y APEA + + T K DIYS+GV+LLE+I+G LP + ++ +
Sbjct: 199 --------TAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 248
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670
I ++ K + D +D + +D D + ++ +A C+H+ +KRP ++ V L +
Sbjct: 249 EIEDEEKTIEDYIDKKM-NDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
Query: 671 S 671
S
Sbjct: 307 S 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 150/301 (49%), Gaps = 36/301 (11%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN----GGWQRFKEFQTEAEAIGKIRHPNIVSLRA 430
+G+ G+VYK +NN VAV++L + ++F E + + K +H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
+ D+ L+Y Y+PNGSL + G PLSW R +I +G A GI FLHE
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHE--- 151
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
++H D++ +NILL + ISDFGLAR +E+ + GT
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQTVMXXRIVGT---------- 198
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
+ Y APEA + + T K DIYS+GV+LLE+I+G LP + ++ +
Sbjct: 199 --------TAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 248
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670
I ++ K + D +D + +D D + ++ +A C+H+ +KRP ++ V L +
Sbjct: 249 EIEDEEKTIEDYIDKKM-NDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
Query: 671 S 671
S
Sbjct: 307 S 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 150/301 (49%), Gaps = 36/301 (11%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN----GGWQRFKEFQTEAEAIGKIRHPNIVSLRA 430
+G+ G+VYK +NN VAV++L + ++F E + + K +H N+V L
Sbjct: 33 MGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
+ D+ L+Y Y+PNGSL + G PLSW R +I +G A GI FLHE
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHE--- 145
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
++H D++ +NILL + ISDFGLAR +E+ + GT
Sbjct: 146 NHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVMXXRIVGT---------- 192
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
+ Y APEA + + T K DIYS+GV+LLE+I+G LP + ++ +
Sbjct: 193 --------TAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 242
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670
I ++ K + D +D + +D D + ++ +A C+H+ +KRP ++ V L +
Sbjct: 243 EIEDEEKTIEDYIDKKM-NDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 300
Query: 671 S 671
S
Sbjct: 301 S 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 142/290 (48%), Gaps = 36/290 (12%)
Query: 376 GKSTIGIVYKVALNNEEAVAVRRLGN----GGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
G+ G+VYK +NN VAV++L + ++F E + K +H N+V L +
Sbjct: 31 GEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
D+ L+Y Y PNGSL + G PLSW R +I +G A GI FLHE
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGT---PPLSWHXRCKIAQGAANGINFLHE---N 143
Query: 492 RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
++H D++ +NILL + ISDFGLAR +E+ + GT
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVXXSRIVGT----------- 189
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ Y APEA + + T K DIYS+GV+LLE+I+G LP + ++ +
Sbjct: 190 -------TAYXAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEE 240
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
I ++ K + D +D +D D + + +A C+H+ +KRP ++ V
Sbjct: 241 IEDEEKTIEDYIDK-KXNDADST-SVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 29/290 (10%)
Query: 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
FL+G G VYK L + VA++R Q +EF+TE E + RHP++VSL +
Sbjct: 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+E +LIY Y+ NG+L ++G + +SW RL I G A+G+ +LH +
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSD--LPTMSMSWEQRLEICIGAARGLHYLH---TRA 159
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++ NILL +N P I+DFG+++ ++T + T G
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG------------- 206
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL-NIVQWIQL 611
Y PE + T+K D+YS+GV+L E++ + ++Q E+ N+ +W +
Sbjct: 207 --------YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW-AV 257
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
+ + I+DP LA D + + + A+ C+ S + RPSM V
Sbjct: 258 ESHNNGQLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 29/290 (10%)
Query: 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
FL+G G VYK L + VA++R Q +EF+TE E + RHP++VSL +
Sbjct: 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+E +LIY Y+ NG+L ++G + +SW RL I G A+G+ +LH +
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSD--LPTMSMSWEQRLEICIGAARGLHYLH---TRA 159
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++ NILL +N P I+DFG+++ E + H GT
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGT---ELGQTHLXXVVKGTL----------- 205
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL-NIVQWIQL 611
Y PE + T+K D+YS+GV+L E++ + ++Q E+ N+ +W +
Sbjct: 206 -------GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW-AV 257
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
+ + I+DP LA D + + + A+ C+ S + RPSM V
Sbjct: 258 ESHNNGQLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 47/286 (16%)
Query: 385 KVALNNEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYD 443
KV E VA++ L G ++ ++F +EA +G+ HPNI+ L ++I +
Sbjct: 30 KVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITE 89
Query: 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI 503
Y+ NGSL + G + L + +++G+ G+ +L ++S YVH DL NI
Sbjct: 90 YMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYLSDMS---YVHRDLAARNI 141
Query: 504 LLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQA 563
L+ N+ +SDFG++R + E+ PE + P++ + A
Sbjct: 142 LVNSNLVCKVSDFGMSR---VLEDDPEAAYTTRGGKIPIR-----------------WTA 181
Query: 564 PEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDI 622
PEA RK T D++SYG+++ E++S G+ P + + ++ I+ I E + +
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----IKAIEEGYRLPPPM 236
Query: 623 LDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
P H L LDC K RP + + LD++
Sbjct: 237 DCPIALHQL------------MLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 47/286 (16%)
Query: 385 KVALNNEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYD 443
KV E VA++ L G ++ ++F +EA +G+ HPNI+ L ++I +
Sbjct: 36 KVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITE 95
Query: 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI 503
Y+ NGSL + G + L + +++G+ G+ +L ++S YVH DL NI
Sbjct: 96 YMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYLSDMS---YVHRDLAARNI 147
Query: 504 LLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQA 563
L+ N+ +SDFG++R + E+ PE + P++ + A
Sbjct: 148 LVNSNLVCKVSDFGMSR---VLEDDPEAAYTTRGGKIPIR-----------------WTA 187
Query: 564 PEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDI 622
PEA RK T D++SYG+++ E++S G+ P + + ++ I+ I E + +
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----IKAIEEGYRLPPPM 242
Query: 623 LDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
P H L LDC K RP + + LD++
Sbjct: 243 DCPIALHQL------------MLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 146/307 (47%), Gaps = 48/307 (15%)
Query: 364 LEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRH 422
+E+++ A F G+ G + K E VA++ L G +R +EF +EA +G+ H
Sbjct: 20 IEEVIGAGEF--GEVCRGRL-KAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 76
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
PNI+ L + +++ +++ NG+L + + G + L + +++G+A G+
Sbjct: 77 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGM 131
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
+L E+S YVH DL NIL+ N+ +SDFGL+R + P E S+ G +
Sbjct: 132 RYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT---ETSSLGGKI 185
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSM 601
P +T APEA RK T D +SYG+++ E++S G+ P + +
Sbjct: 186 ---PIRWT------------APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 230
Query: 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
++ I I +D + L P D S+ ++ LDC K + RP V
Sbjct: 231 DV-----INAIEQDYR-----LPP-------PPDCPTSLHQLMLDCWQKDRNARPRFPQV 273
Query: 662 CDSLDRV 668
+LD++
Sbjct: 274 VSALDKM 280
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 149/324 (45%), Gaps = 50/324 (15%)
Query: 347 NMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR 406
N +EF +E+++ A F G+ G + K+ E VA++ L G ++
Sbjct: 9 NQAVHEFAKEIEASCITIERVIGAGEF--GEVCSGRL-KLPGKRELPVAIKTLKVGYTEK 65
Query: 407 -FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRP 465
++F EA +G+ HPNI+ L +++ +Y+ NGSL T + G +
Sbjct: 66 QRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQ 125
Query: 466 LSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525
L + +++G++ G+ +L ++ YVH DL NIL+ N+ +SDFGL+R +
Sbjct: 126 L-----VGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VL 174
Query: 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVIL 585
E+ PE + P++ + APEA RK T D++SYG+++
Sbjct: 175 EDDPEAAYTTRGGKIPIR-----------------WTAPEAIAFRKFTSASDVWSYGIVM 217
Query: 586 LEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIA 644
E++S G+ P ++ + ++++ ++ PM D ++ ++
Sbjct: 218 WEVVSYGERPYWEMTNQ--DVIKAVEEGYRLPSPM---------------DCPAALYQLM 260
Query: 645 LDCVHKSPDKRPSMRHVCDSLDRV 668
LDC K + RP + + LD++
Sbjct: 261 LDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 150/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 36 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 149
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGLAR + E+ P
Sbjct: 150 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLAR---VLEDDP 201
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 245 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 287
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 147/308 (47%), Gaps = 50/308 (16%)
Query: 364 LEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRH 422
+E+++ A F G+ G + K E VA++ L G +R +EF +EA +G+ H
Sbjct: 18 IEEVIGAGEF--GEVCRGRL-KAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 74
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
PNI+ L + +++ +++ NG+L + + G + L + +++G+A G+
Sbjct: 75 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGM 129
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-P 541
+L E+S YVH DL NIL+ N+ +SDFGL+R + E + + + S G P
Sbjct: 130 RYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRF--LEENSSDPTYTSSLGGKIP 184
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600
++ + APEA RK T D +SYG+++ E++S G+ P + +
Sbjct: 185 IR-----------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
Query: 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRH 660
++ I I +D + L P D S+ ++ LDC K + RP
Sbjct: 228 QDV-----INAIEQDYR-----LPP-------PPDCPTSLHQLMLDCWQKDRNARPRFPQ 270
Query: 661 VCDSLDRV 668
V +LD++
Sbjct: 271 VVSALDKM 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 24 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 80
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 137
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 138 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 189
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 190 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 232
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 233 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 275
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 276 QKDRNNRPKFEQIVSILDKL 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 7 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 120
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 121 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 172
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 173 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 216 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 258
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 259 QKDRNNRPKFEQIVSILDKL 278
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 36 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 149
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 150 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 201
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 245 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 287
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 36 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 149
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 150 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 201
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 245 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 287
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 36 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 149
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 150 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 201
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 245 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 287
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 36 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 149
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 150 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 201
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 245 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 287
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 34 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 90
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 91 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 147
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 148 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 199
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 200 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 242
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 243 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 285
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 286 QKDRNNRPKFEQIVSILDKL 305
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + KIRH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVV-S 83
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 174
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 230
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 231 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 278 PQYQPGE 284
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 129/286 (45%), Gaps = 47/286 (16%)
Query: 385 KVALNNEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYD 443
KV E VA++ L G ++ ++F +EA +G+ HPNI+ L ++I +
Sbjct: 51 KVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITE 110
Query: 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI 503
Y+ NGSL + G + L + +++G+ G+ +L ++S VH DL NI
Sbjct: 111 YMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYLSDMSA---VHRDLAARNI 162
Query: 504 LLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQA 563
L+ N+ +SDFG++R + E+ PE + P++ + A
Sbjct: 163 LVNSNLVCKVSDFGMSR---VLEDDPEAAYTTRGGKIPIR-----------------WTA 202
Query: 564 PEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDI 622
PEA RK T D++SYG+++ E++S G+ P + + ++ I+ I E + +
Sbjct: 203 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----IKAIEEGYRLPPPM 257
Query: 623 LDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
P H L LDC K RP + + LD++
Sbjct: 258 DCPIALHQL------------MLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 149/308 (48%), Gaps = 50/308 (16%)
Query: 364 LEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRH 422
+EQ++ A F G+ G + K+ E VA++ L +G ++ ++F +EA +G+ H
Sbjct: 37 IEQVIGAGEF--GEVCSGHL-KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 93
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
PN++ L ++I +++ NGSL + + G + L + +++G+A G+
Sbjct: 94 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGM 148
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-P 541
+L +++ YVH DL NIL+ N+ +SDFGL+R + ++T + + + G P
Sbjct: 149 KYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRF--LEDDTSDPTYTSALGGKIP 203
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600
++ + APEA + RK T D++SYG+++ E++S G+ P + +
Sbjct: 204 IR-----------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
Query: 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRH 660
++ I I +D + + P H L LDC K + RP
Sbjct: 247 QDV-----INAIEQDYRLPPPMDCPSALHQL------------MLDCWQKDRNHRPKFGQ 289
Query: 661 VCDSLDRV 668
+ ++LD++
Sbjct: 290 IVNTLDKM 297
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 149/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 36 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 149
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL R + E+ P
Sbjct: 150 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGR---VLEDDP 201
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 245 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 287
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 76
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 129
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 167
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 168 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 223
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 224 GYRMPCPPEC-PESLHDL------------MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 270
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 271 PQYQPGE 277
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 340
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 396
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 397 GYRMPCPPEC-PESLHDL------------MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 444 PQYQPGE 450
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 174
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 230
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 231 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 278 PQYQPGE 284
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 72
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 125
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E +TA
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------YTARQG 163
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 164 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 219
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 220 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 266
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 267 PQYQPGE 273
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 174
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 230
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 231 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 278 PQYQPGE 284
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 74
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 127
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 165
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 166 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 221
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 222 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 268
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 269 PQYQPGE 275
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 174
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 230
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 231 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 278 PQYQPGE 284
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 150/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 36 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ +Y+ NGSL + + + L
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL--- 149
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ +VH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 150 --VGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 201
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 245 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 287
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETG----KYLRLPQLVDMSAQIASGMAYVERMN---YV 133
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 171
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 172 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 227
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 228 GYRMPCPPEC-PESLHDL------------MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 274
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 275 PQYQPGE 281
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 137/303 (45%), Gaps = 54/303 (17%)
Query: 374 LLGKSTIGIVYKVALNN-----EEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
++G G VYK L E VA++ L G ++ + +F EA +G+ H NI+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
L ++I +Y+ NG+L + K G S L + +++G+A G+ +L
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-----VGMLRGIAAGMKYLAN 165
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
++ YVH DL NIL+ N+ +SDFGL+R + E+ PE + S P++
Sbjct: 166 MN---YVHRDLAARNILVNSNLVCKVSDFGLSR---VLEDDPEATYTTSGGKIPIR---- 215
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIV 606
+ APEA RK T D++S+G+++ E+++ G+ P ++ + E+
Sbjct: 216 -------------WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV--- 259
Query: 607 QWIQLILEDRKPMTDILDPF-LAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665
M I D F L +D I ++ + C + +RP + L
Sbjct: 260 ------------MKAINDGFRLPTPMDCPSAIYQLM---MQCWQQERARRPKFADIVSIL 304
Query: 666 DRV 668
D++
Sbjct: 305 DKL 307
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 73
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 126
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E T + G P ++TA
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXT-------ARQGAKF---PIKWTA--- 173
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
PEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 174 ---------PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 220
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 221 GYRMPCPPEC-PESLHDL------------MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 267
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 268 PQYQPGE 274
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETG----KYLRLPQLVDMSAQIASGMAYVERMN---YV 133
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEWTARQG 171
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 172 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 227
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 228 GYRMPCPPEC-PESLHDL------------MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 274
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 275 PQYQPGE 281
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ G L + G+ G + L + + +A G+A++ ++ YV
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 174
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 230
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 231 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 278 PQYQPGE 284
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 340
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 396
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 397 GYRMPCPPEC-PESLHDL------------MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
Query: 674 QQFMKGE 680
Q GE
Sbjct: 444 PQXQPGE 450
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ G L + G+ G + L + + +A G+A++ ++ YV
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 174
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 230
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 231 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 278 PQYQPGE 284
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E T + G P ++TA
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXT-------ARQGAKF---PIKWTA--- 183
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
PEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 184 ---------PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 230
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 231 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 278 PQYQPGE 284
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 144/307 (46%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VA++ L G + F EA+ + K++H +V L A S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVV-S 74
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G R L + + + VA G+A++ ++ Y+
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIERMN---YI 127
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G + I+DFGLARL + E T + G P ++T
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXT-------ARQGAKF---PIKWT---- 173
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
APEA+ + T K D++S+G++L E+++ G++P + + E +L
Sbjct: 174 --------APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---------VL 216
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
E + + P +D +S+ ++ + C K P++RP+ ++ L+ +TE
Sbjct: 217 EQVERGYRMPCP--------QDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATE 268
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 269 PQYQPGE 275
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 149/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 7 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ + + NGSL + + + L
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL--- 120
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 121 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 172
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 173 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 216 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 258
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 259 QKDRNNRPKFEQIVSILDKL 278
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 147/307 (47%), Gaps = 48/307 (15%)
Query: 364 LEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRH 422
+EQ++ A F G+ G + K+ E VA++ L +G ++ ++F +EA +G+ H
Sbjct: 11 IEQVIGAGEF--GEVCSGHL-KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 67
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
PN++ L ++I +++ NGSL + + G + L + +++G+A G+
Sbjct: 68 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGM 122
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
+L +++ YVH L NIL+ N+ +SDFGL+R + ++T + + + G
Sbjct: 123 KYLADMN---YVHRALAARNILVNSNLVCKVSDFGLSRF--LEDDTSDPTYTSALGG--- 174
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSM 601
P +T APEA + RK T D++SYG+++ E++S G+ P + +
Sbjct: 175 -KIPIRWT------------APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 221
Query: 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
++ I I +D + + P H L LDC K + RP +
Sbjct: 222 DV-----INAIEQDYRLPPPMDCPSALHQL------------MLDCWQKDRNHRPKFGQI 264
Query: 662 CDSLDRV 668
++LD++
Sbjct: 265 VNTLDKM 271
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 340
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 396
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 397 GYRMPCPPEC-PESLHDL------------MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
Query: 674 QQFMKGE 680
Q GE
Sbjct: 444 PQXQPGE 450
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 332
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 385
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGLARL + E +TA
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------YTARQG 423
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 479
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 480 GYRMPCPPEC-PESLHDL------------MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526
Query: 674 QQFMKGE 680
Q GE
Sbjct: 527 PQXQPGE 533
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 149/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 36 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ + + NGSL + + + L
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL--- 149
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ YVH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 150 --VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 201
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 245 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 287
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 146/307 (47%), Gaps = 50/307 (16%)
Query: 364 LEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRH 422
+E+++ A F G+ G + K+ + AVA++ L G ++ ++F EA +G+ H
Sbjct: 47 IERVIGAGEF--GEVCSGRL-KLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDH 103
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
PN+V L +++ +++ NG+L + G + L + +++G+A G+
Sbjct: 104 PNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL-----VGMLRGIAAGM 158
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
+L ++ YVH DL NIL+ N+ +SDFGL+R + E+ PE + +TTG +
Sbjct: 159 RYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSR---VIEDDPEAVY--TTTGGKI 210
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSM 601
P +T APEA + RK T D++SYG+++ E++S G+ P + +
Sbjct: 211 ---PVRWT------------APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 255
Query: 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
++ I+ I E + + P H L LDC K +RP +
Sbjct: 256 DV-----IKAIEEGYRLPAPMDCPAGLHQL------------MLDCWQKERAERPKFEQI 298
Query: 662 CDSLDRV 668
LD++
Sbjct: 299 VGILDKM 305
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL +NIL+G+N+ ++DFGLARL + E+TA
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIE----------------------DNEYTARQG 174
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 230
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 231 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 674 QQFMKGE 680
Q+ GE
Sbjct: 278 PQYQPGE 284
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 137/307 (44%), Gaps = 49/307 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ G V+ N VA++ L G + F EA+ + K+RH +V L A S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVV-S 250
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ +Y+ GSL + G+ G + L + + +A G+A++ ++ YV
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMN---YV 303
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+G+N+ ++DFGL RL + E+TA
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIE----------------------DNEYTARQG 341
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA+ + T K D++S+G++L E+ + G++P + + E+ Q+
Sbjct: 342 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQVER 397
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P P HDL C K P++RP+ ++ L+ STE
Sbjct: 398 GYRMPCPPEC-PESLHDL------------MCQCWRKDPEERPTFEYLQAFLEDYFTSTE 444
Query: 674 QQFMKGE 680
Q GE
Sbjct: 445 PQXQPGE 451
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 53/305 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + AE T + P++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTA-----REGAKFPIK----------- 175
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 176 ------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 230 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 270
Query: 672 TEQQF 676
TE Q+
Sbjct: 271 TEGQY 275
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 53/305 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 87
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 140
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E T + P++
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REGAKFPIK----------- 184
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 185 ------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 238
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 239 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 279
Query: 672 TEQQF 676
TE QF
Sbjct: 280 TEGQF 284
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 385 KVALNNEEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYD 443
+V + VA++ L G +R ++F +EA +G+ HPNI+ L +++ +
Sbjct: 71 RVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130
Query: 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI 503
Y+ NGSL T + G + L + +++GV G+ +L ++ YVH DL N+
Sbjct: 131 YMENGSLDTFLRTHDGQFTIMQL-----VGMLRGVGAGMRYLSDLG---YVHRDLAARNV 182
Query: 504 LLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQA 563
L+ N+ +SDFGL+R + E+ P+ + + P++ + A
Sbjct: 183 LVDSNLVCKVSDFGLSR---VLEDDPDAAYTTTGGKIPIR-----------------WTA 222
Query: 564 PEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDI 622
PEA R + D++S+GV++ E+++ G+ P + + ++ I + E + +
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----ISSVEEGYRLPAPM 277
Query: 623 LDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
P H L LDC HK +RP + LD + S E
Sbjct: 278 GCPHALHQL------------MLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 139/305 (45%), Gaps = 53/305 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 88
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 141
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E+TA
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIE----------------------DNEYTAREG 179
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 180 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 239
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 240 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 280
Query: 672 TEQQF 676
TE Q+
Sbjct: 281 TEGQY 285
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 56/292 (19%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
++G+ G+V K ++ VA++++ + K F E + ++ HPNIV L Y
Sbjct: 15 VVGRGAFGVVCKAKWRAKD-VAIKQIESE--SERKAFIVELRQLSRVNHPNIVKL--YGA 69
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISY---RPLSWSDRLRIIKGVAKGIAFLHEVSP 490
++ L+ +Y GSL +HG + Y +SW + ++G+A+LH + P
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHSMQP 123
Query: 491 KRYVHGDLRPSNILL-GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549
K +H DL+P N+LL I DFG A DI
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ------------------------ 157
Query: 550 TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609
T + + + + APE + ++K D++S+G+IL E+I+ + P +IG I+ +
Sbjct: 158 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV 217
Query: 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
+ P L +L K E + C K P +RPSM +
Sbjct: 218 H----------NGTRPPLIKNLPKPIE-----SLMTRCWSKDPSQRPSMEEI 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 56/292 (19%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
++G+ G+V K ++ VA++++ + K F E + ++ HPNIV L Y
Sbjct: 16 VVGRGAFGVVCKAKWRAKD-VAIKQIESE--SERKAFIVELRQLSRVNHPNIVKL--YGA 70
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISY---RPLSWSDRLRIIKGVAKGIAFLHEVSP 490
++ L+ +Y GSL +HG + Y +SW + ++G+A+LH + P
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHSMQP 124
Query: 491 KRYVHGDLRPSNILL-GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549
K +H DL+P N+LL I DFG A DI
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ------------------------ 158
Query: 550 TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609
T + + + + APE + ++K D++S+G+IL E+I+ + P +IG I+ +
Sbjct: 159 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV 218
Query: 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
+ P L +L K E + C K P +RPSM +
Sbjct: 219 H----------NGTRPPLIKNLPKPIE-----SLMTRCWSKDPSQRPSMEEI 255
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 148/320 (46%), Gaps = 50/320 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKE 409
+EF + +++++ A F G+ G + K+ E +VA++ L G ++ ++
Sbjct: 36 HEFAKELDATNISIDKVVGAGEF--GEVCSGRL-KLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F EA +G+ HPNI+ L +++ + + NGSL + + + L
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL--- 149
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ +++G+A G+ +L ++ VH DL NIL+ N+ +SDFGL+R + E+ P
Sbjct: 150 --VGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSR---VLEDDP 201
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E + P++ + +PEA RK T D++SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIR-----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
S G+ P ++ + ++ I+ + E + L P + D ++ ++ LDC
Sbjct: 245 SYGERPYWEMSNQDV-----IKAVDEGYR-----LPPPM-------DCPAALYQLMLDCW 287
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
K + RP + LD++
Sbjct: 288 QKDRNNRPKFEQIVSILDKL 307
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 141/305 (46%), Gaps = 53/305 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E T + P++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REGAKFPIK----------- 175
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 176 ------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 230 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 270
Query: 672 TEQQF 676
TE Q+
Sbjct: 271 TEGQY 275
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 47/291 (16%)
Query: 385 KVALNNEEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYD 443
+V + VA++ L G +R ++F +EA +G+ HPNI+ L +++ +
Sbjct: 71 RVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130
Query: 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI 503
Y+ NGSL T + G + L + +++GV G+ +L ++ YVH DL N+
Sbjct: 131 YMENGSLDTFLRTHDGQFTIMQL-----VGMLRGVGAGMRYLSDLG---YVHRDLAARNV 182
Query: 504 LLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQA 563
L+ N+ +SDFGL+R + E+ P+ +TTG + P +T A
Sbjct: 183 LVDSNLVCKVSDFGLSR---VLEDDPDA--AXTTTGGKI---PIRWT------------A 222
Query: 564 PEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDI 622
PEA R + D++S+GV++ E+++ G+ P + + ++ I + E + +
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----ISSVEEGYRLPAPM 277
Query: 623 LDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
P H L LDC HK +RP + LD + S E
Sbjct: 278 GCPHALHQL------------MLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 142/305 (46%), Gaps = 53/305 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 86
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 139
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E T + G P ++T
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKF---PIKWT---- 185
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 186 --------APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 237
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 238 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 278
Query: 672 TEQQF 676
TE Q+
Sbjct: 279 TEGQY 283
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 142/305 (46%), Gaps = 53/305 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 84
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 137
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E T + G P ++T
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKF---PIKWT---- 183
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 184 --------APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 235
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 236 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 276
Query: 672 TEQQF 676
TE Q+
Sbjct: 277 TEGQY 281
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 137/302 (45%), Gaps = 53/302 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 83
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 136
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E+TA
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIE----------------------DNEYTAREG 174
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 175 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 234
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 235 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 275
Query: 672 TE 673
TE
Sbjct: 276 TE 277
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 53/295 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 73
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 126
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E+TA
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIE----------------------DNEYTAREG 164
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 165 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 224
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666
+ D P +E+ ++++ C + P+ RP+ ++ L+
Sbjct: 225 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLE 260
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 136/301 (45%), Gaps = 53/301 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 84
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 137
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E+TA
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIE----------------------DNEYTAREG 175
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 235
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 236 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 276
Query: 672 T 672
T
Sbjct: 277 T 277
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 136/301 (45%), Gaps = 53/301 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E+TA
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIE----------------------DNEYTAREG 169
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 230 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 270
Query: 672 T 672
T
Sbjct: 271 T 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 53/301 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 79
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 132
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E T + P++
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REGAKFPIK----------- 176
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 177 ------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 230
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 231 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 271
Query: 672 T 672
T
Sbjct: 272 T 272
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 53/301 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 80
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 133
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E T + P++
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REGAKFPIK----------- 177
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 178 ------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 231
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 232 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 272
Query: 672 T 672
T
Sbjct: 273 T 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 53/301 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ + I+DFGLARL + E T + P++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REGAKFPIK----------- 175
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 176 ------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 230 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 270
Query: 672 T 672
T
Sbjct: 271 T 271
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 53/301 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ L G F EA + +++H +V L A +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 74
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ NGSL + +GI L+ + L + +A+G+AF+ E + Y+
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIEE---RNYI 127
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H +LR +NIL+ + I+DFGLARL + E+TA
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIE----------------------DNEYTAREG 165
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
+ APEA T K D++S+G++L E+++ G++P + + E+ N+ + ++
Sbjct: 166 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 225
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
+ D P +E+ ++++ C + P+ RP+ ++ L+ +
Sbjct: 226 VRPDNCP----------------EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 266
Query: 672 T 672
T
Sbjct: 267 T 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 127/298 (42%), Gaps = 49/298 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G G+V+ N++ VA++ + G ++F EAE + K+ HP +V L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
L+++++ +G L+ + + G+ + L L + V +G+A+L E S +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAS---VI 125
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+G+N +SDFG+ R + T S+TGT
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------SSTGTKFPVK--------- 169
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ +PE + + K D++S+GV++ E+ S GK+P + E ++
Sbjct: 170 ------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VV 214
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
ED + P LA V +I C + P+ RP+ + L + S
Sbjct: 215 EDISTGFRLYKPRLAS--------THVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 49/295 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G G+V+ N++ VA++ + G ++F EAE + K+ HP +V L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
L+++++ +G L+ + + G+ + L L + V +G+A+L E +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 128
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+G+N +SDFG+ R + T S+TGT
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------SSTGTKFPVK--------- 172
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ +PE + + K D++S+GV++ E+ S GK+P + E ++
Sbjct: 173 ------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VV 217
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
ED + P LA V +I C + P+ RP+ + L +
Sbjct: 218 EDISTGFRLYKPRLAS--------THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 374 LLGKSTIGIVYKVALNNE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+LGK G KV E + ++ L + + F E + + + HPN++
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ I +YI G+L I + S P WS R+ K +A G+A+LH ++
Sbjct: 77 YKDKRLNFITEYIKGGTLRGII---KSMDSQYP--WSQRVSFAKDIASGMAYLHSMN--- 128
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL N L+ +N ++DFGLARL + PE + P + Y
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE---GLRSLKKPDRKKRY----- 180
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ Y+ APE R +K D++S+G++L E+I
Sbjct: 181 -TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 133/302 (44%), Gaps = 49/302 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ + G + F EA + ++H +V L A +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV-T 253
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +++ GSL + G S +PL + +A+G+AF+ + + Y+
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEG--SKQPLP--KLIDFSAQIAEGMAFIEQ---RNYI 306
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ ++ I+DFGLAR+ + E+TA
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIE----------------------DNEYTAREG 344
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA T K D++S+G++L+E+++ G++P + + E +++ ++
Sbjct: 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGY 402
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
+P E+ + I + C P++RP+ ++ LD +TE
Sbjct: 403 RMPRP---------------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447
Query: 674 QQ 675
Q
Sbjct: 448 SQ 449
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 49/295 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G G+V+ N++ VA++ + G ++F EAE + K+ HP +V L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
L+++++ +G L+ + + G+ + L L + V +G+A+L E +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 125
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+G+N +SDFG+ R + T S+TGT
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------SSTGTKFPVK--------- 169
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ +PE + + K D++S+GV++ E+ S GK+P + E ++
Sbjct: 170 ------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VV 214
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
ED + P LA V +I C + P+ RP+ + L +
Sbjct: 215 EDISTGFRLYKPRLAS--------THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 49/295 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G G+V+ N++ VA++ + G ++F EAE + K+ HP +V L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
L+++++ +G L+ + + G+ + L L + V +G+A+L E +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 123
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+G+N +SDFG+ R + T S+TGT
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------SSTGTKFPVK--------- 167
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ +PE + + K D++S+GV++ E+ S GK+P + E ++
Sbjct: 168 ------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VV 212
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
ED + P LA V +I C + P+ RP+ + L +
Sbjct: 213 EDISTGFRLYKPRLAS--------THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 49/295 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G G+V+ N++ VA++ + G +F EAE + K+ HP +V L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
L+++++ +G L+ + + G+ + L L + V +G+A+L E +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 145
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+G+N +SDFG+ R + T S+TGT
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------SSTGTKFPVK--------- 189
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ +PE + + K D++S+GV++ E+ S GK+P + E ++
Sbjct: 190 ------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VV 234
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
ED + P LA V +I C + P+ RP+ + L +
Sbjct: 235 EDISTGFRLYKPRLAS--------THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+G + G V++ + + VAV+ L + +R EF E + ++RHPNIV
Sbjct: 45 IGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
++ +Y+ GSL +H K+G + L RL + VAKG+ +LH +P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH-KSG--AREQLDERRRLSMAYDVAKGMNYLHNRNPP- 159
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
VH DL+ N+L+ K + DFGL+RL + + GTP
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRL-----KASXFLXSKXAAGTP----------- 203
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
+ APE + +K D+YS+GVIL E+ + + P
Sbjct: 204 -------EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 139/312 (44%), Gaps = 43/312 (13%)
Query: 357 DSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DS +++E + +G + G VYK + + AV + ++ + ++F+ F+ E
Sbjct: 26 DSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAV 85
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
+ K RH NI+ Y + D ++ + SL +H + L + I +
Sbjct: 86 LRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-----IDIAR 139
Query: 477 GVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQS 536
A+G+ +LH K +H D++ +NI L + + I DFGLA + + +V +
Sbjct: 140 QTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV---EQ 193
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
TG+ L +P E + S+ + D+YSYG++L E+++G+LP
Sbjct: 194 PTGSVLWMAP-EVIRMQDNNPFSF--------------QSDVYSYGIVLYELMTGELPYS 238
Query: 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDK--EDEIVSVLKIALDCVHKSPDK 654
I + + Q+I + + + DL K ++ ++ ++ DCV K ++
Sbjct: 239 HINNRD-------QIIFM-------VGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEE 284
Query: 655 RPSMRHVCDSLD 666
RP + S++
Sbjct: 285 RPLFPQILSSIE 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+G + G V++ + + VAV+ L + +R EF E + ++RHPNIV
Sbjct: 45 IGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
++ +Y+ GSL +H K+G + L RL + VAKG+ +LH +P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH-KSG--AREQLDERRRLSMAYDVAKGMNYLHNRNPP- 159
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
VH +L+ N+L+ K + DFGL+RL +++T F +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRL-------------KAST----------FLSS 196
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
S + APE + +K D+YS+GVIL E+ + + P
Sbjct: 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 49/295 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G G+V+ N++ VA++ + G ++F EAE + K+ HP +V L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
L+ +++ +G L+ + + G+ + L L + V +G+A+L E +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 126
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+G+N +SDFG+ R + T S+TGT
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------SSTGTKFPVK--------- 170
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ +PE + + K D++S+GV++ E+ S GK+P + E ++
Sbjct: 171 ------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VV 215
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
ED + P LA V +I C + P+ RP+ + L +
Sbjct: 216 EDISTGFRLYKPRLAS--------THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 59/298 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G+V + VAV+ + G EF EA+ + K+ HP +V F+
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVK----FYG 70
Query: 435 VDEK----LLIYDYIPNGSLATAI--HGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEV 488
V K ++ +YI NG L + HGK L S L + V +G+AFL
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKG-------LEPSQLLEMCYDVCEGMAFL--- 120
Query: 489 SPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYE 548
+++H DL N L+ +++ +SDFG+ R + S+ GT P +
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV-------SSVGTKF---PVK 170
Query: 549 FTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608
++ APE K + K D++++G+++ E+ S +G M ++
Sbjct: 171 WS------------APEVFHYFKYSSKSDVWAFGILMWEVFS-------LGKMPYDLYTN 211
Query: 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666
+++L+ + + P LA D ++ +I C H+ P+KRP+ + + S++
Sbjct: 212 SEVVLKVSQGHR-LYRPHLASD--------TIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 143/324 (44%), Gaps = 55/324 (16%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEA-VAVRRLGNGGWQRFKEFQTEAEAIGK 419
D L++ L AF GK + Y ++ ++ VAV+ L + K+FQ EAE +
Sbjct: 16 DIVLKRELGEGAF--GKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTN 73
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI--HGKAGII--------SYRPLSWS 469
++H +IV D +++++Y+ +G L + HG +I + L S
Sbjct: 74 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
L I +A G+ +L + + +VH DL N L+G N+ I DFG++R D+ +
Sbjct: 134 QMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR--DVY--ST 186
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ + T P++ P PE+ RK T + D++S+GVIL E+
Sbjct: 187 DYYRVGGHTMLPIRWMP-----------------PESIMYRKFTTESDVWSFGVILWEIF 229
Query: 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P Q+ + E+ I+ I + R + P +D + L C
Sbjct: 230 TYGKQPWFQLSNTEV-----IECITQGRVLERPRVCPKEVYD------------VMLGCW 272
Query: 649 HKSPDKRPSMRHVCDSLDRVNIST 672
+ P +R +++ + L + +T
Sbjct: 273 QREPQQRLNIKEIYKILHALGKAT 296
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 135/313 (43%), Gaps = 60/313 (19%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + A I + L L+ + KG+ +L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL-----LQYTSQICKGMEYL-- 133
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V + +P+
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV---KEPGESPI----- 184
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS----GKLPMIQIGSM-- 601
++ APE+ K + D++S+GV+L E+ + K P + M
Sbjct: 185 ------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 232
Query: 602 -----ELNIVQWIQLILED-RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
++ + I+L+ + R P D DEI ++ +C + + ++R
Sbjct: 233 NDKQGQMIVFHLIELLKNNGRLPRPDGC----------PDEIYMIM---TECWNNNVNQR 279
Query: 656 PSMRHVCDSLDRV 668
PS R + +D++
Sbjct: 280 PSFRDLALRVDQI 292
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 48/305 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ NN VAV+ L G + F EA + ++H +V L A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +Y+ GSL + G P + +A+G+A++ K Y+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLP----KLIDFSAQIAEGMAYIER---KNYI 132
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +N+L+ +++ I+DFGLAR+ + E+TA
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIE----------------------DNEYTAREG 170
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA T K D++S+G++L E+++ GK+P G +++ L
Sbjct: 171 AKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY--PGRTNADVM--TALSQ 226
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
R P + + DE+ ++K+ C + ++RP+ ++ LD +TE
Sbjct: 227 GYRMPRVE----------NCPDELYDIMKM---CWKEKAEERPTFDYLQSVLDDFYTATE 273
Query: 674 QQFMK 678
Q+ +
Sbjct: 274 GQYQQ 278
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 57/315 (18%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGK 419
D++L++++ + A T + +E VA++R+ Q E E +A+ +
Sbjct: 16 DYELQEVIGSGA------TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-------HGKAGIISYRPLSWSDRL 472
HPNIVS F DE L+ + GS+ I K+G++ ++
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA----- 124
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
I++ V +G+ +LH+ +H D++ NILLG++ I+DFG++ +
Sbjct: 125 TILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 181
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISG 591
++ GTP + APE +VR K DI+S+G+ +E+ +G
Sbjct: 182 VRKTFVGTPC------------------WMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
Query: 592 KLPMIQIGSMELNIVQWIQLILEDRKPM--TDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P + M++ + L L++ P T + D + K S K+ C+
Sbjct: 224 AAPYHKYPPMKV-----LMLTLQNDPPSLETGVQDKEMLKKYGK-----SFRKMISLCLQ 273
Query: 650 KSPDKRPS----MRH 660
K P+KRP+ +RH
Sbjct: 274 KDPEKRPTAAELLRH 288
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 57/315 (18%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGK 419
D++L++++ + A T + +E VA++R+ Q E E +A+ +
Sbjct: 11 DYELQEVIGSGA------TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-------HGKAGIISYRPLSWSDRL 472
HPNIVS F DE L+ + GS+ I K+G++ ++
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA----- 119
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
I++ V +G+ +LH+ +H D++ NILLG++ I+DFG++ +
Sbjct: 120 TILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISG 591
++ GTP + APE +VR K DI+S+G+ +E+ +G
Sbjct: 177 VRKTFVGTPC------------------WMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
Query: 592 KLPMIQIGSMELNIVQWIQLILEDRKPM--TDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P + M++ + L L++ P T + D + K S K+ C+
Sbjct: 219 AAPYHKYPPMKV-----LMLTLQNDPPSLETGVQDKEMLKKYGK-----SFRKMISLCLQ 268
Query: 650 KSPDKRPS----MRH 660
K P+KRP+ +RH
Sbjct: 269 KDPEKRPTAAELLRH 283
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 49/293 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ + G + F EA + ++H +V L A +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV-T 80
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +++ GSL + G S +PL + +A+G+AF+ + + Y+
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEG--SKQPLP--KLIDFSAQIAEGMAFIEQ---RNYI 133
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ ++ I+DFGLAR+ + E+TA
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIE----------------------DNEYTAREG 171
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA T K D++S+G++L+E+++ G++P + + E +++ ++
Sbjct: 172 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGY 229
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666
+P E+ + I + C P++RP+ ++ LD
Sbjct: 230 RMPRP---------------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 44/272 (16%)
Query: 341 LDTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEA-VAVRRL 399
+DT ++++++ V L++ L AF GK + Y + ++ VAV+ L
Sbjct: 3 MDTFVQHIKRHNIV---------LKRELGEGAF--GKVFLAECYNLCPEQDKILVAVKTL 51
Query: 400 GNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI--HGK 457
+ K+F EAE + ++H +IV D +++++Y+ +G L + HG
Sbjct: 52 KDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGP 111
Query: 458 AGIISYR-----PLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512
++ L+ S L I + +A G+ +L + + +VH DL N L+G+N+
Sbjct: 112 DAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVK 168
Query: 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP 572
I DFG++R D+ + + + T P++ P PE+ RK
Sbjct: 169 IGDFGMSR--DVY--STDYYRVGGHTMLPIRWMP-----------------PESIMYRKF 207
Query: 573 TQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
T + D++S GV+L E+ + GK P Q+ + E+
Sbjct: 208 TTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 146/338 (43%), Gaps = 63/338 (18%)
Query: 345 SENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW 404
S NM Q+E + + F L+QL K + G + + N E VAV++L +
Sbjct: 19 SHNMTQFE----ERHLKF-LQQLGKGN---FGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 70
Query: 405 QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIIS 462
+ ++F+ E E + ++H NIV + +S + LI +Y+P GSL + I
Sbjct: 71 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522
+ L L+ + KG+ +L KRY+H DL NIL+ I DFGL ++
Sbjct: 131 HIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYG 582
+E +V P E S ++ APE+ K + D++S+G
Sbjct: 183 PQDKEXXKV------------KEPGE--------SPIFWYAPESLTESKFSVASDVWSFG 222
Query: 583 VILLEMIS----GKLPMIQIGSM-------ELNIVQWIQLILED-RKPMTDILDPFLAHD 630
V+L E+ + K P + M ++ + I+L+ + R P D
Sbjct: 223 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGC------- 275
Query: 631 LDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
DEI ++ +C + + ++RPS R + +D++
Sbjct: 276 ---PDEIYMIM---TECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 111/248 (44%), Gaps = 38/248 (15%)
Query: 345 SENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW 404
S NM Q+E + + F L+QL K + G + + N E VAV++L +
Sbjct: 19 SHNMTQFE----ERHLKF-LQQLGKGN---FGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 70
Query: 405 QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIIS 462
+ ++F+ E E + ++H NIV + +S + LI +Y+P GSL + I
Sbjct: 71 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522
+ L L+ + KG+ +L KRY+H DL NIL+ I DFGL ++
Sbjct: 131 HIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYG 582
+E +V P E S ++ APE+ K + D++S+G
Sbjct: 183 PQDKEXXKV------------KEPGE--------SPIFWYAPESLTESKFSVASDVWSFG 222
Query: 583 VILLEMIS 590
V+L E+ +
Sbjct: 223 VVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 133/313 (42%), Gaps = 60/313 (19%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 130
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V P
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV------------KEPG 177
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS----GKLPMIQIGSM-- 601
E S ++ APE+ K + D++S+GV+L E+ + K P + M
Sbjct: 178 E--------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 229
Query: 602 -----ELNIVQWIQLILED-RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
++ + I+L+ + R P D DEI ++ +C + + ++R
Sbjct: 230 NDKQGQMIVFHLIELLKNNGRLPRPDGC----------PDEIYMIM---TECWNNNVNQR 276
Query: 656 PSMRHVCDSLDRV 668
PS R + +D++
Sbjct: 277 PSFRDLALRVDQI 289
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 128
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V P
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV------------KEPG 175
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
E S ++ APE+ K + D++S+GV+L E+ +
Sbjct: 176 E--------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 60/313 (19%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 137
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V + +P+
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV---KEPGESPI----- 188
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS----GKLPMIQIGSM-- 601
++ APE+ K + D++S+GV+L E+ + K P + M
Sbjct: 189 ------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 236
Query: 602 -----ELNIVQWIQLILED-RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
++ + I+L+ + R P D DEI ++ +C + + ++R
Sbjct: 237 NDKQGQMIVFHLIELLKNNGRLPRPDGC----------PDEIYMIM---TECWNNNVNQR 283
Query: 656 PSMRHVCDSLDRV 668
PS R + +D++
Sbjct: 284 PSFRDLALRVDQI 296
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 129
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V + +P+
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV---KEPGESPI----- 180
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ APE+ K + D++S+GV+L E+ +
Sbjct: 181 ------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 130
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V P
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV------------KEPG 177
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
E S ++ APE+ K + D++S+GV+L E+ +
Sbjct: 178 E--------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 133/313 (42%), Gaps = 60/313 (19%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 161
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V P
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV------------KEPG 208
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS----GKLPMIQIGSM-- 601
E S ++ APE+ K + D++S+GV+L E+ + K P + M
Sbjct: 209 E--------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 260
Query: 602 -----ELNIVQWIQLILED-RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
++ + I+L+ + R P D DEI ++ +C + + ++R
Sbjct: 261 NDKQGQMIVFHLIELLKNNGRLPRPDGC----------PDEIYMIM---TECWNNNVNQR 307
Query: 656 PSMRHVCDSLDRV 668
PS R + +D++
Sbjct: 308 PSFRDLALRVDQI 320
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 60/313 (19%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 135
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V + +P+
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV---KEPGESPI----- 186
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS----GKLPMIQIGSM-- 601
++ APE+ K + D++S+GV+L E+ + K P + M
Sbjct: 187 ------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 234
Query: 602 -----ELNIVQWIQLILED-RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
++ + I+L+ + R P D DEI ++ +C + + ++R
Sbjct: 235 NDKQGQMIVFHLIELLKNNGRLPRPDGC----------PDEIYMIM---TECWNNNVNQR 281
Query: 656 PSMRHVCDSLDRV 668
PS R + +D++
Sbjct: 282 PSFRDLALRVDQI 294
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 133/313 (42%), Gaps = 60/313 (19%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 136
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V P
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV------------KEPG 183
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS----GKLPMIQIGSM-- 601
E S ++ APE+ K + D++S+GV+L E+ + K P + M
Sbjct: 184 E--------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 235
Query: 602 -----ELNIVQWIQLILED-RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
++ + I+L+ + R P D DEI ++ +C + + ++R
Sbjct: 236 NDKQGQMIVFHLIELLKNNGRLPRPDGC----------PDEIYMIM---TECWNNNVNQR 282
Query: 656 PSMRHVCDSLDRV 668
PS R + +D++
Sbjct: 283 PSFRDLALRVDQI 295
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 133
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V + +P+
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV---KEPGESPI----- 184
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ APE+ K + D++S+GV+L E+ +
Sbjct: 185 ------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 130/313 (41%), Gaps = 60/313 (19%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 130
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF------------------- 170
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS----GKLPMIQIGSM-- 601
F S ++ APE+ K + D++S+GV+L E+ + K P + M
Sbjct: 171 -FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 229
Query: 602 -----ELNIVQWIQLILED-RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
++ + I+L+ + R P D DEI ++ +C + + ++R
Sbjct: 230 NDKQGQMIVFHLIELLKNNGRLPRPDGC----------PDEIYMIM---TECWNNNVNQR 276
Query: 656 PSMRHVCDSLDRV 668
PS R + +D++
Sbjct: 277 PSFRDLALRVDQI 289
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 134
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V + +P+
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV---KEPGESPI----- 185
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ APE+ K + D++S+GV+L E+ +
Sbjct: 186 ------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 52/307 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ NN VAV+ L G + F EA + ++H +V L A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAG--IISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ +I +++ GSL + G ++ + + +S + +A+G+A++ K
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ------IAEGMAYIER---KN 129
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
Y+H DLR +N+L+ +++ I+DFGLAR+ + E+TA
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIE----------------------DNEYTAR 167
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611
+ APEA T K +++S+G++L E+++ GK+P G +++ L
Sbjct: 168 EGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPY--PGRTNADVMS--AL 223
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671
R P + + DE+ ++K+ C + ++RP+ ++ LD +
Sbjct: 224 SQGYRMPRME----------NCPDELYDIMKM---CWKEKAEERPTFDYLQSVLDDFYTA 270
Query: 672 TEQQFMK 678
TE Q+ +
Sbjct: 271 TEGQYQQ 277
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 59/307 (19%)
Query: 375 LGKSTIGIVYKVAL-NNEEAVAVRRLGNGG-------WQRFKEFQTEAEAIGKIRHPNIV 426
+GK G+V+K L ++ VA++ L G ++F+EFQ E + + HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 427 SLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
L Y + ++ +++P G L + KA P+ WS +LR++ +A GI ++
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNME-----PHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+P VH DLR NI L E ++DFGL++ + VH G
Sbjct: 140 NQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS--------VHSVSGLLGNF 190
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601
+P A SY T+K D YS+ +IL +++G+ P +
Sbjct: 191 QWMAPETIGA----EEESY------------TEKADTYSFAMILYTILTGEGPFDEYS-- 232
Query: 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
+++I +I E+ L P + D + +V+++ C P KRP ++
Sbjct: 233 -YGKIKFINMIREEG------LRPTIPEDCPP--RLRNVIEL---CWSGDPKKRPHFSYI 280
Query: 662 CDSLDRV 668
L +
Sbjct: 281 VKELSEL 287
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 59/302 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G V+ N VAV+ + G + F EA + ++H +V L A +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV-T 247
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ +I +++ GSL + G S +PL + +A+G+AF+ + + Y+
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEG--SKQPLP--KLIDFSAQIAEGMAFIEQ---RNYI 300
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DLR +NIL+ ++ I+DFGLAR+ P++
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVG---------------AKFPIK----------- 334
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613
+ APEA T K D++S+G++L+E+++ G++P + + E +++ ++
Sbjct: 335 ------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGY 386
Query: 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673
+P E+ + I + C P++RP+ ++ LD +TE
Sbjct: 387 RMPRP---------------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 431
Query: 674 QQ 675
Q
Sbjct: 432 SQ 433
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 130/302 (43%), Gaps = 49/302 (16%)
Query: 375 LGKSTIGIVYKVAL-NNEEAVAVRRLGNGG-------WQRFKEFQTEAEAIGKIRHPNIV 426
+GK G+V+K L ++ VA++ L G ++F+EFQ E + + HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 427 SLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
L Y + ++ +++P G L + KA P+ WS +LR++ +A GI ++
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
+P VH DLR NI L E + A++AD VH G +P
Sbjct: 140 NQNPP-IVHRDLRSPNIFLQSLDE---NAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAP 195
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606
A SY T+K D YS+ +IL +++G+ P + +
Sbjct: 196 ETIGA----EEESY------------TEKADTYSFAMILYTILTGEGPFDEYS---YGKI 236
Query: 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666
++I +I E+ L P + D + +V+++ C P KRP ++ L
Sbjct: 237 KFINMIREEG------LRPTIPEDCPP--RLRNVIEL---CWSGDPKKRPHFSYIVKELS 285
Query: 667 RV 668
+
Sbjct: 286 EL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 49/302 (16%)
Query: 375 LGKSTIGIVYKVAL-NNEEAVAVRRLGNGG-------WQRFKEFQTEAEAIGKIRHPNIV 426
+GK G+V+K L ++ VA++ L G ++F+EFQ E + + HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 427 SLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
L Y + ++ +++P G L + KA P+ WS +LR++ +A GI ++
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
+P VH DLR NI L E + A++AD + VH G +P
Sbjct: 140 NQNPP-IVHRDLRSPNIFLQSLDE---NAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAP 195
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606
A SY T+K D YS+ +IL +++G+ P + +
Sbjct: 196 ETIGA----EEESY------------TEKADTYSFAMILYTILTGEGPFDEYS---YGKI 236
Query: 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666
++I +I E+ L P + D + +V+++ C P KRP ++ L
Sbjct: 237 KFINMIREEG------LRPTIPEDCPP--RLRNVIEL---CWSGDPKKRPHFSYIVKELS 285
Query: 667 RV 668
+
Sbjct: 286 EL 287
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 60/313 (19%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +++P GSL + I + L L+ + KG+ +L
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 133
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H DL NIL+ I DFGL ++ +E +V + +P+
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV---KEPGESPI----- 184
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS----GKLPMIQIGSM-- 601
++ APE+ K + D++S+GV+L E+ + K P + M
Sbjct: 185 ------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 232
Query: 602 -----ELNIVQWIQLILED-RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
++ + I+L+ + R P D DEI ++ +C + + ++R
Sbjct: 233 NDKQGQMIVFHLIELLKNNGRLPRPDGC----------PDEIYMIM---TECWNNNVNQR 279
Query: 656 PSMRHVCDSLDRV 668
PS R + +D++
Sbjct: 280 PSFRDLALRVDQI 292
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 60/321 (18%)
Query: 375 LGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V N E VAV++L + + ++F+ E E + ++H NIV +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
+S + LI +Y+P GSL + I + L L+ + KG+ +L
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL-- 131
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
KRY+H +L NIL+ I DFGL ++ +E +V + +P+
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV---KEPGESPI----- 182
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS----GKLPMIQIGSM-- 601
++ APE+ K + D++S+GV+L E+ + K P + M
Sbjct: 183 ------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 230
Query: 602 -----ELNIVQWIQLILED-RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
++ + I+L+ + R P D DEI ++ +C + + ++R
Sbjct: 231 NDKQGQMIVFHLIELLKNNGRLPRPDGC----------PDEIYMIM---TECWNNNVNQR 277
Query: 656 PSMRHVCDSLDRVNISTEQQF 676
PS R + +D++ + +F
Sbjct: 278 PSFRDLALRVDQIRDNMAGEF 298
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 51/318 (16%)
Query: 357 DSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DS D+++ +G + G VYK + + AV + + Q+ + F+ E
Sbjct: 14 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 73
Query: 417 IGKIRHPNIVSLRAYFWSVDEKL-LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRII 475
+ K RH NI+ Y S +L ++ + SL +H + L + I
Sbjct: 74 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIA 126
Query: 476 KGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
+ A+G+ +LH K +H DL+ +NI L ++ I DFGLA T + W
Sbjct: 127 RQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA--------TEKSRW-- 173
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGK 592
S ++F L+ + + APE +++ + + D+Y++G++L E+++G+
Sbjct: 174 --------SGSHQFEQLSGSI---LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHK 650
LP I + + Q I+++ L+ DL K + ++ +C+ K
Sbjct: 223 LPYSNINNRD----QIIEMVGRGS----------LSPDLSKVRSNCPKRMKRLMAECLKK 268
Query: 651 SPDKRPSMRHVCDSLDRV 668
D+RPS + ++ +
Sbjct: 269 KRDERPSFPRILAEIEEL 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 49/299 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 90
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ + SL +H + L + I + A+G+ +LH K +
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH---AKSII 142
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL+ +NI L ++ I DFGLA T + W S ++F L+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA--------TEKSRW----------SGSHQFEQLSG 184
Query: 555 TTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q I++
Sbjct: 185 SI---LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----QIIEM 237
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
+ L+ DL K + ++ +C+ K D+RPS + ++ +
Sbjct: 238 VGRGS----------LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 51/318 (16%)
Query: 357 DSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DS D+++ +G + G VYK + + AV + + Q+ + F+ E
Sbjct: 2 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 61
Query: 417 IGKIRHPNIVSLRAYFWSVDEKL-LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRII 475
+ K RH NI+ Y S +L ++ + SL +H + L + I
Sbjct: 62 LRKTRHVNILLFMGY--STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIA 114
Query: 476 KGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
+ A+G+ +LH K +H DL+ +NI L ++ I DFGLA T + W
Sbjct: 115 RQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA--------TVKSRW-- 161
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGK 592
S ++F L+ + + APE +++ + + D+Y++G++L E+++G+
Sbjct: 162 --------SGSHQFEQLSGSI---LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHK 650
LP I + + Q I+++ L+ DL K + ++ +C+ K
Sbjct: 211 LPYSNINNRD----QIIEMVGRGS----------LSPDLSKVRSNCPKRMKRLMAECLKK 256
Query: 651 SPDKRPSMRHVCDSLDRV 668
D+RPS + ++ +
Sbjct: 257 KRDERPSFPRILAEIEEL 274
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 88 LRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXX 147
L+NN F+G +P L N S L SL LS N SG +P +G L L+ L L
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 148 XIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL 207
++ K L+T++L+ N TG +P G + N T L + LS N L+G IP I L L +L
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLS-NCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 516
Query: 208 AQRVYVDLTYNNLSGLIP 225
L+ N+ SG IP
Sbjct: 517 K------LSNNSFSGNIP 528
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 82/195 (42%), Gaps = 31/195 (15%)
Query: 68 KLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGK 127
+ G L LS N+ + + G N ++ L +S N SG +P +IG
Sbjct: 592 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 651
Query: 128 LKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSF 187
+ YL +L+L N +G +PD +L L LDLS
Sbjct: 652 MPYLFILNL------------------------GHNDISGSIPDEVG-DLRGLNILDLSS 686
Query: 188 NNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGP 247
N L G IP ++ L+ L +DL+ NNLSG IP+ + P F+ NP LCG
Sbjct: 687 NKLDGRIPQAMSALTML------TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 740
Query: 248 PLKVSCPSSTSDHPY 262
PL PS+ + +
Sbjct: 741 PLPRCDPSNADGYAH 755
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 62 LIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPV 121
L + N TG IP L + S + ++L N SG++P L + S L+ L L N G +
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 122 PMQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQ 181
P ++ +K L+ L L + C L + L+ N TG +P + L L
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK-WIGRLENLA 514
Query: 182 KLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIP 225
L LS N+ SG IP ++ + L +++DL N +G IP
Sbjct: 515 ILKLSNNSFSGNIPAELGDCRSL------IWLDLNTNLFNGTIP 552
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 62 LIIPNKKLTGFIPADL-GSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGP 120
L + K TG IP L G+ + ++L N+F G++P + S L+SL LS N+FSG
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 121 VPMQ-IGKLKYLQVLDLXXXXXXXXXXXXIVQ-CKRLKTVVLNQNSFTGP-LPDGFATNL 177
+PM + K++ L+VLDL + L T+ L+ N+F+GP LP+
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 178 TALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLS 232
LQ+L L N +G IP ++N S L V + L++N LSG IP + LS
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSEL------VSLHLSFNYLSGTIPSSLGSLS 439
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 73/308 (23%)
Query: 23 LLSFKQAIRNFPEGN---NWNNSNEDPCSWNGITCREGQVFSLIIPNKKL-TGF--IPAD 76
L+SFK + P+ N +W+ SN++PC+++G+TCR+ +V S+ + +K L GF + +
Sbjct: 14 LISFKDVL---PDKNLLPDWS-SNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSS 69
Query: 77 LGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPV--------------- 121
L SL+ + + L N++ +GS+ +AS L SL LS NS SGPV
Sbjct: 70 LLSLTGLESLFLSNSHINGSVSGFKCSAS-LTSLDLSRNSLSGPVTTLTSLGSCSGLKFL 128
Query: 122 ---------PMQIG---KLKYLQVLDLXXXXXXXXXXXXIV---QCKRLKTVVLNQNSFT 166
P ++ KL L+VLDL V C LK + ++ N +
Sbjct: 129 NVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKIS 188
Query: 167 GPL--------------PDGFATNL------TALQKLDLSFNNLSGLIPNDIANLSRLRL 206
G + + F+T + +ALQ LD+S N LSG I+ + L+L
Sbjct: 189 GDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKL 248
Query: 207 LAQRVYVDLTYNNLSGLIP----QNAALLSLGPTAFIGN--PFLCGPPLKVSCPSSTSDH 260
L +++ N G IP ++ LSL F G FL G ++ + +H
Sbjct: 249 L------NISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH 302
Query: 261 PYPKPLPY 268
Y P+
Sbjct: 303 FYGAVPPF 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 62 LIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPV 121
L I KL+G + + + + +N+ +N F G P+ +LQ L L+ N F+G +
Sbjct: 225 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVG--PIPPLPLKSLQYLSLAENKFTGEI 282
Query: 122 PMQI-GKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTAL 180
P + G L LDL C L+++ L+ N+F+G LP + L
Sbjct: 283 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 342
Query: 181 QKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQN 227
+ LDLSFN SG +P + NLS A + +DL+ NN SG I N
Sbjct: 343 KVLDLSFNEFSGELPESLTNLS-----ASLLTLDLSSNNFSGPILPN 384
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 55 REGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSG 114
G + L + L+G+IP ++GS+ + +NL +N+ SGS+P E+ + L L LS
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 115 NSFSGPVPMQIGKLKYLQVLDL 136
N G +P + L L +DL
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDL 708
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 88 LRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXX 147
L+NN F+G +P L N S L SL LS N SG +P +G L L+ L L
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 148 XIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL 207
++ K L+T++L+ N TG +P G + N T L + LS N L+G IP I L L +L
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLS-NCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519
Query: 208 AQRVYVDLTYNNLSGLIP 225
L+ N+ SG IP
Sbjct: 520 K------LSNNSFSGNIP 531
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 81/193 (41%), Gaps = 31/193 (16%)
Query: 68 KLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGK 127
+ G L LS N+ + + G N ++ L +S N SG +P +IG
Sbjct: 595 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654
Query: 128 LKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSF 187
+ YL +L+L N +G +PD +L L LDLS
Sbjct: 655 MPYLFILNL------------------------GHNDISGSIPDEVG-DLRGLNILDLSS 689
Query: 188 NNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGP 247
N L G IP ++ L+ L +DL+ NNLSG IP+ + P F+ NP LCG
Sbjct: 690 NKLDGRIPQAMSALTML------TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743
Query: 248 PLKVSCPSSTSDH 260
PL PS+ +
Sbjct: 744 PLPRCDPSNADGY 756
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 62 LIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPV 121
L + N TG IP L + S + ++L N SG++P L + S L+ L L N G +
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 122 PMQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQ 181
P ++ +K L+ L L + C L + L+ N TG +P + L L
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK-WIGRLENLA 517
Query: 182 KLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIP 225
L LS N+ SG IP ++ + L +++DL N +G IP
Sbjct: 518 ILKLSNNSFSGNIPAELGDCRSL------IWLDLNTNLFNGTIP 555
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 62 LIIPNKKLTGFIPADL-GSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGP 120
L + K TG IP L G+ + ++L N+F G++P + S L+SL LS N+FSG
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 121 VPMQ-IGKLKYLQVLDLXXXXXXXXXXXXIVQ-CKRLKTVVLNQNSFTGP-LPDGFATNL 177
+PM + K++ L+VLDL + L T+ L+ N+F+GP LP+
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 178 TALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLS 232
LQ+L L N +G IP ++N S L V + L++N LSG IP + LS
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSEL------VSLHLSFNYLSGTIPSSLGSLS 442
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 62 LIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPV 121
L I KL+G + + + + +N+ +N F G P+ +LQ L L+ N F+G +
Sbjct: 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVG--PIPPLPLKSLQYLSLAENKFTGEI 285
Query: 122 P-MQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTAL 180
P G L LDL C L+++ L+ N+F+G LP + L
Sbjct: 286 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 345
Query: 181 QKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQN 227
+ LDLSFN SG +P + NLS A + +DL+ NN SG I N
Sbjct: 346 KVLDLSFNEFSGELPESLTNLS-----ASLLTLDLSSNNFSGPILPN 387
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 73/308 (23%)
Query: 23 LLSFKQAIRNFPEGN---NWNNSNEDPCSWNGITCREGQVFSLIIPNKKL-TGF--IPAD 76
L+SFK + P+ N +W+ SN++PC+++G+TCR+ +V S+ + +K L GF + +
Sbjct: 17 LISFKDVL---PDKNLLPDWS-SNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSS 72
Query: 77 LGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPV--------------- 121
L SL+ + + L N++ +GS+ +AS L SL LS NS SGPV
Sbjct: 73 LLSLTGLESLFLSNSHINGSVSGFKCSAS-LTSLDLSRNSLSGPVTTLTSLGSCSGLKFL 131
Query: 122 ---------PMQIG---KLKYLQVLDLXXXXXXXXXXXXIV---QCKRLKTVVLNQNSFT 166
P ++ KL L+VLDL V C LK + ++ N +
Sbjct: 132 NVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKIS 191
Query: 167 GPL--------------PDGFATNL------TALQKLDLSFNNLSGLIPNDIANLSRLRL 206
G + + F+T + +ALQ LD+S N LSG I+ + L+L
Sbjct: 192 GDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKL 251
Query: 207 LAQRVYVDLTYNNLSGLIP----QNAALLSLGPTAFIGN--PFLCGPPLKVSCPSSTSDH 260
L +++ N G IP ++ LSL F G FL G ++ + +H
Sbjct: 252 L------NISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH 305
Query: 261 PYPKPLPY 268
Y P+
Sbjct: 306 FYGAVPPF 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 55 REGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSG 114
G + L + L+G+IP ++GS+ + +NL +N+ SGS+P E+ + L L LS
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 115 NSFSGPVPMQIGKLKYLQVLDL 136
N G +P + L L +DL
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDL 711
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 62/275 (22%)
Query: 405 QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYR 464
Q + + EA+ ++HPNI++LR L+ ++ G L + GK I
Sbjct: 48 QTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR-IPPDI 106
Query: 465 PLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP--------HISDF 516
++W+ + +A+G+ +LH+ + +H DL+ SNIL+ + +E I+DF
Sbjct: 107 LVNWAVQ------IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160
Query: 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKW 576
GLAR W ++T S + APE + ++
Sbjct: 161 GLAR-----------EWHRTTK--------------MSAAGAYAWMAPEVIRASMFSKGS 195
Query: 577 DIYSYGVILLEMISGKLPMIQIGSMELN---IVQWIQLILEDRKPMTDILDPFLAHDLDK 633
D++SYGV+L E+++G++P I + + + + L + P +PF
Sbjct: 196 DVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCP-----EPF------- 243
Query: 634 EDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
K+ DC + P RPS ++ D L +
Sbjct: 244 -------AKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 49/297 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y S
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 73
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+L I GS +++ II + + I + A+G+ +LH K +
Sbjct: 74 TKPQLAIVTQWCEGS---SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA--------TEKSRW----------SGSHQFEQLSG 168
Query: 555 TTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q+
Sbjct: 169 SI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------QI 218
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 219 IFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 49/297 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 74
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+ ++ + SL +H II + + I + A+G+ +LH K +
Sbjct: 75 APQLAIVTQWCEGSSLYHHLH----IIETK-FEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRW----------SGSHQFEQLSG 168
Query: 555 TTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q+
Sbjct: 169 SI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------QI 218
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 219 IFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 49/297 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y S
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 73
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+L I GS +++ II + + I + A+G+ +LH K +
Sbjct: 74 TKPQLAIVTQWCEGS---SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRW----------SGSHQFEQLSG 168
Query: 555 TTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q+
Sbjct: 169 SI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------QI 218
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 219 IFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 51/298 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y S
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 101
Query: 435 VDEKL-LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+L ++ + SL +H II + + I + A+G+ +LH K
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLH----IIETK-FEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA--------TEKSRW----------SGSHQFEQLS 195
Query: 554 STTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q
Sbjct: 196 GSI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------Q 245
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
+I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 246 IIFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 49/297 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y S
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 78
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+L I GS +++ II + + I + A+G+ +LH K +
Sbjct: 79 TKPQLAIVTQWCEGS---SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH---AKSII 131
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRW----------SGSHQFEQLSG 173
Query: 555 TTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q+
Sbjct: 174 SI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------QI 223
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 224 IFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 51/298 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y S
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 93
Query: 435 VDEKL-LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+L ++ + SL +H II + + I + A+G+ +LH K
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLH----IIETK-FEMIKLIDIARQTAQGMDYLH---AKSI 145
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLA--------TEKSRW----------SGSHQFEQLS 187
Query: 554 STTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q
Sbjct: 188 GSI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------Q 237
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
+I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 238 IIFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 49/297 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y S
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 75
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+L I GS +++ II + + I + A+G+ +LH K +
Sbjct: 76 TKPQLAIVTQWCEGS---SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH---AKSII 128
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRW----------SGSHQFEQLSG 170
Query: 555 TTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q+
Sbjct: 171 SI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------QI 220
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 221 IFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 44/265 (16%)
Query: 346 ENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAV--AVRRLGNGG 403
++M+QYE V D + D +++ LG G VYK A N E +V A + +
Sbjct: 21 QSMKQYEHVTRDLNPE-DFWEIIGE----LGDGAFGKVYK-AQNKETSVLAAAKVIDTKS 74
Query: 404 WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISY 463
+ +++ E + + HPNIV L F+ + ++ ++ G++ + +
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-----LELE 129
Query: 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523
RPL+ S + K + +LH+ + +H DL+ NIL + + ++DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVS---- 182
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAP-----EASKVRKPTQKWDI 578
A+ T + S GTP Y+ AP E SK R K D+
Sbjct: 183 -AKNTRXIQRRDSFIGTP------------------YWMAPEVVMCETSKDRPYDYKADV 223
Query: 579 YSYGVILLEMISGKLPMIQIGSMEL 603
+S G+ L+EM + P ++ M +
Sbjct: 224 WSLGITLIEMAEIEPPHHELNPMRV 248
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 49/297 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y S
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 78
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+L I GS +++ II + + I + A+G+ +LH K +
Sbjct: 79 TKPQLAIVTQWCEGS---SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH---AKSII 131
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRW----------SGSHQFEQLSG 173
Query: 555 TTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q+
Sbjct: 174 SI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------QI 223
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 224 IFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 78/320 (24%)
Query: 374 LLGKSTIGIVYKVALNNE---EAVAVRRLGN-GGWQRFKEFQTEAEAIGKI-RHPNIVSL 428
++G+ G V K + + A++R+ ++F E E + K+ HPNI++L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 429 ------RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRP-----------LSWSDR 471
R Y + L +Y P+G+L + K+ ++ P LS
Sbjct: 92 LGACEHRGYLY------LAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQL 144
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
L VA+G+ +L S K+++H DL NIL+G+N I+DFGL+R EV
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEV 194
Query: 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS- 590
+ +++ P++ + A+ S Y T D++SYGV+L E++S
Sbjct: 195 YVKKTMGRLPVR-----WMAIESLNYSVY------------TTNSDVWSYGVLLWEIVSL 237
Query: 591 GKLPMIQIGSMEL--NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
G P + EL + Q +L KP L+ +DE+ +++ C
Sbjct: 238 GGTPYCGMTCAELYEKLPQGYRL----EKP------------LNCDDEVYDLMR---QCW 278
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
+ P +RPS + SL+R+
Sbjct: 279 REKPYERPSFAQILVSLNRM 298
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 44/265 (16%)
Query: 346 ENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAV--AVRRLGNGG 403
++M+QYE V D + D +++ LG G VYK A N E +V A + +
Sbjct: 21 QSMKQYEHVTRDLNPE-DFWEIIGE----LGDGAFGKVYK-AQNKETSVLAAAKVIDTKS 74
Query: 404 WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISY 463
+ +++ E + + HPNIV L F+ + ++ ++ G++ + +
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-----LELE 129
Query: 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523
RPL+ S + K + +LH+ + +H DL+ NIL + + ++DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVS---- 182
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAP-----EASKVRKPTQKWDI 578
A+ T + S GTP Y+ AP E SK R K D+
Sbjct: 183 -AKNTRTIQRRDSFIGTP------------------YWMAPEVVMCETSKDRPYDYKADV 223
Query: 579 YSYGVILLEMISGKLPMIQIGSMEL 603
+S G+ L+EM + P ++ M +
Sbjct: 224 WSLGITLIEMAEIEPPHHELNPMRV 248
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 78/320 (24%)
Query: 374 LLGKSTIGIVYKVALNNE---EAVAVRRLGN-GGWQRFKEFQTEAEAIGKI-RHPNIVSL 428
++G+ G V K + + A++R+ ++F E E + K+ HPNI++L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 429 ------RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRP-----------LSWSDR 471
R Y + L +Y P+G+L + K+ ++ P LS
Sbjct: 82 LGACEHRGYLY------LAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQL 134
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
L VA+G+ +L S K+++H DL NIL+G+N I+DFGL+R EV
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEV 184
Query: 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS- 590
+ +++ P++ + A+ S Y T D++SYGV+L E++S
Sbjct: 185 YVKKTMGRLPVR-----WMAIESLNYSVY------------TTNSDVWSYGVLLWEIVSL 227
Query: 591 GKLPMIQIGSMEL--NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
G P + EL + Q +L KP L+ +DE+ +++ C
Sbjct: 228 GGTPYCGMTCAELYEKLPQGYRL----EKP------------LNCDDEVYDLMR---QCW 268
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
+ P +RPS + SL+R+
Sbjct: 269 REKPYERPSFAQILVSLNRM 288
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 51/298 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y S
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 100
Query: 435 VDEKL-LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+L ++ + SL +H II + + I + A+G+ +LH K
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLH----IIETK-FEMIKLIDIARQTAQGMDYLH---AKSI 152
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRW----------SGSHQFEQLS 194
Query: 554 STTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q
Sbjct: 195 GSI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------Q 244
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
+I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 245 IIFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 51/298 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
+G + G VYK + + AV + + Q+ + F+ E + K RH NI+ Y S
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 101
Query: 435 VDEKL-LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+L ++ + SL +H II + + I + A+G+ +LH K
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLH----IIETK-FEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL+ +NI L +++ I DFGLA T + W S ++F L+
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRW----------SGSHQFEQLS 195
Query: 554 STTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
+ + APE +++ + + D+Y++G++L E+++G+LP I + + Q
Sbjct: 196 GSI---LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-------Q 245
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIV--SVLKIALDCVHKSPDKRPSMRHVCDSLD 666
+I + +L+ DL K ++ ++ +C+ K D+RP + S++
Sbjct: 246 IIFM-------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 405 QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYR 464
+ K F+ E ++ H NIVS+ D L+ +YI +L+ I S+
Sbjct: 53 ETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE------SHG 106
Query: 465 PLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524
PLS + + GI H++ R VH D++P NIL+ N I DFG+A+
Sbjct: 107 PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-- 161
Query: 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVI 584
S T N Y +PE +K + DIYS G++
Sbjct: 162 --------------------SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 585 LLEMISGKLP 594
L EM+ G+ P
Sbjct: 202 LYEMLVGEPP 211
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 64/326 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
Q++ A A L K V KVA+ ++ A + + +E E + I +H N
Sbjct: 84 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKN 136
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK--AGI-ISYRP-------LSWSDRLRI 474
I++L +I +Y G+L + + G+ SY P LS D +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VA+G+ +L + K+ +H DL N+L+ ++ I+DFGLAR DI +++
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHID---YYK 248
Query: 535 QSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GK 592
++T G P++ + APEA R T + D++S+GV+L E+ + G
Sbjct: 249 KTTNGRLPVK-----------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 291
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKS 651
P + EL +L+ E H +DK + L + + DC H
Sbjct: 292 SPYPGVPVEEL-----FKLLKE-------------GHRMDKPSNCTNELYMMMRDCWHAV 333
Query: 652 PDKRPSMRHVCDSLDRVNISTEQQFM 677
P +RP+ + + + LDR+ T Q M
Sbjct: 334 PSQRPTFKQLVEDLDRIVALTSNQEM 359
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 44/265 (16%)
Query: 346 ENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAV--AVRRLGNGG 403
++M+QYE V D + D +++ LG G VYK A N E +V A + +
Sbjct: 21 QSMKQYEHVTRDLNPE-DFWEIIGE----LGDGAFGKVYK-AQNKETSVLAAAKVIDTKS 74
Query: 404 WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISY 463
+ +++ E + + HPNIV L F+ + ++ ++ G++ + +
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-----LELE 129
Query: 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523
RPL+ S + K + +LH+ + +H DL+ NIL + + ++DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVS---- 182
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAP-----EASKVRKPTQKWDI 578
A+ T + GTP Y+ AP E SK R K D+
Sbjct: 183 -AKNTRXIQRRDXFIGTP------------------YWMAPEVVMCETSKDRPYDYKADV 223
Query: 579 YSYGVILLEMISGKLPMIQIGSMEL 603
+S G+ L+EM + P ++ M +
Sbjct: 224 WSLGITLIEMAEIEPPHHELNPMRV 248
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 78/320 (24%)
Query: 374 LLGKSTIGIVYKVALNNE---EAVAVRRLGN-GGWQRFKEFQTEAEAIGKI-RHPNIVSL 428
++G+ G V K + + A++R+ ++F E E + K+ HPNI++L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 429 ------RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRP-----------LSWSDR 471
R Y + L +Y P+G+L + K+ ++ P LS
Sbjct: 89 LGACEHRGYLY------LAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQL 141
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
L VA+G+ +L S K+++H +L NIL+G+N I+DFGL+R EV
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR-------GQEV 191
Query: 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS- 590
+ +++ P++ + A+ S Y T D++SYGV+L E++S
Sbjct: 192 YVKKTMGRLPVR-----WMAIESLNYSVY------------TTNSDVWSYGVLLWEIVSL 234
Query: 591 GKLPMIQIGSMEL--NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
G P + EL + Q +L KP L+ +DE+ +++ C
Sbjct: 235 GGTPYCGMTCAELYEKLPQGYRL----EKP------------LNCDDEVYDLMR---QCW 275
Query: 649 HKSPDKRPSMRHVCDSLDRV 668
+ P +RPS + SL+R+
Sbjct: 276 REKPYERPSFAQILVSLNRM 295
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G + + + R ++
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG E I+DFG +
Sbjct: 119 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--------- 160
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S T L T Y PE + R +K D++S GV+ E
Sbjct: 161 --VHAPSSRR-----------TTLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
Query: 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P E N Q E K ++ + F + +++S L +
Sbjct: 205 LVGKPP------FEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL------L 246
Query: 649 HKSPDKRPSMRHVCD 663
+P +RP +R V +
Sbjct: 247 KHNPSQRPMLREVLE 261
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G++ + + R ++
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG E I+DFG +
Sbjct: 119 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--------- 160
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S T L T Y PE + R +K D++S GV+ E
Sbjct: 161 --VHAPSSRR-----------TTLCGTLD---YLPPEXIEGRXHDEKVDLWSLGVLCYEF 204
Query: 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P E N Q E K ++ + F + +++S L +
Sbjct: 205 LVGKPP------FEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL------L 246
Query: 649 HKSPDKRPSMRHVCD 663
+P +RP +R V +
Sbjct: 247 KHNPSQRPXLREVLE 261
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 95
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ FL
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKFL 150
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR + +E VH + TG L
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-LDKEFDSVH---NKTGAKL--- 200
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 201 PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 248
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 249 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 291
Query: 665 LDRV 668
+ +
Sbjct: 292 ISAI 295
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 102/245 (41%), Gaps = 46/245 (18%)
Query: 374 LLGKSTIGIVYKVA---LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRA 430
+LGK + G V K E AV V + + E E + K+ HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
++ + G L I I + S D RIIK V GI ++H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 491 KRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
VH DL+P NILL K+ + I DFGL+ T Q +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLS--------------------TCFQQN-- 177
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPT--QKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605
T + +YY APE V + T +K D++S GVIL ++SG P G E +I
Sbjct: 178 --TKMKDRIGTAYYIAPE---VLRGTYDEKCDVWSAGVILYILLSGTPPF--YGKNEYDI 230
Query: 606 VQWIQ 610
++ ++
Sbjct: 231 LKRVE 235
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G++ + + R ++
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG E I+DFG +
Sbjct: 117 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--------- 158
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S AL T Y PE + R +K D++S GV+ E
Sbjct: 159 --VHAPSSRRA-----------ALCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
Query: 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P E N Q E K ++ + F + +++S L +
Sbjct: 203 LVGKPP------FEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL------L 244
Query: 649 HKSPDKRPSMRHVCD 663
+P +RP +R V +
Sbjct: 245 KHNPSQRPMLREVLE 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 126
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 164
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 165 TLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 212
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 213 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G++ + + R ++
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG E I+DFG +
Sbjct: 119 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--------- 160
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S T L T Y PE + R +K D++S GV+ E
Sbjct: 161 --VHAPSSRR-----------TTLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
Query: 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P E N Q E K ++ + F + +++S L +
Sbjct: 205 LVGKPP------FEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL------L 246
Query: 649 HKSPDKRPSMRHVCD 663
+P +RP +R V +
Sbjct: 247 KHNPSQRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 129
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 167
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 168 TLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 215
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 216 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 123
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 161
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 162 TLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 209
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 210 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 253
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 133/303 (43%), Gaps = 53/303 (17%)
Query: 374 LLGKSTIGIVYKVALNNEEA----VAVRRLGN-GGWQRFKEFQTEAEAIGKIRHPNIVSL 428
++G+ G VY L + + AV+ L +F TE + HPN++SL
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 429 RAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
S L++ Y+ +G L I + ++ P + D + VAKG+ FL
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKFL-- 208
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR-LADIAEETPEVHWEQSTTGTPLQSSP 546
+ K++VH DL N +L + ++DFGLAR + D +E VH + TG L P
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVH---NKTGAKL---P 259
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605
++ AL S ++ + T K D++S+GV+L E+++ G P + + ++ +
Sbjct: 260 VKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
Query: 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665
+L+ R+ +L P D + ++ L C H + RPS + +
Sbjct: 308 -----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSRI 350
Query: 666 DRV 668
+
Sbjct: 351 SAI 353
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 126
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 164
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 165 ELCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 212
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 213 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 152
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 190
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 191 TLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 238
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 239 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 127
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRRDT---------- 166
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 167 -LCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 213
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 214 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 257
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 135/305 (44%), Gaps = 57/305 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 95
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ FL
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKFL 150
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR-LADIAEETPEVHWEQSTTGTPLQS 544
+ K++VH DL N +L + ++DFGLAR + D +E VH + TG L
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVH---NKTGAKL-- 200
Query: 545 SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
P ++ AL E+ + +K T K D++S+GV+L E+++ G P + + ++
Sbjct: 201 -PVKWMAL------------ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 247
Query: 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 248 TV-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVS 290
Query: 664 SLDRV 668
+ +
Sbjct: 291 RISAI 295
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G++ + + R ++
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 130
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG E I+DFG +
Sbjct: 131 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--------- 172
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S T L T Y PE + R +K D++S GV+ E
Sbjct: 173 --VHAPSSRR-----------TTLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 216
Query: 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P E N Q E K ++ + F + +++S L +
Sbjct: 217 LVGKPP------FEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL------L 258
Query: 649 HKSPDKRPSMRHVCD 663
+P +RP +R V +
Sbjct: 259 KHNPSQRPMLREVLE 273
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 64/324 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
Q++ A A L K V KVA+ ++ A + + +E E + I +H N
Sbjct: 43 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKN 95
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKA--GI-ISYRP-------LSWSDRLRI 474
I++L +I +Y G+L + + G+ SY P LS D +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VA+G+ +L + K+ +H DL N+L+ ++ I+DFGLAR DI +++
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHID---YYK 207
Query: 535 QSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GK 592
++T G P++ + APEA R T + D++S+GV+L E+ + G
Sbjct: 208 KTTNGRLPVK-----------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKS 651
P + EL +L+ E H +DK + L + + DC H
Sbjct: 251 SPYPGVPVEEL-----FKLLKE-------------GHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 652 PDKRPSMRHVCDSLDRVNISTEQQ 675
P +RP+ + + + LDR+ T Q
Sbjct: 293 PSQRPTFKQLVEDLDRIVALTSNQ 316
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G++ + + R ++
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 117
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG E I+DFG +
Sbjct: 118 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--------- 159
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S T L T Y PE + R +K D++S GV+ E
Sbjct: 160 --VHAPSSRR-----------TTLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
Query: 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P E N Q E K ++ + F + +++S L +
Sbjct: 204 LVGKPP------FEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL------L 245
Query: 649 HKSPDKRPSMRHVCD 663
+P +RP +R V +
Sbjct: 246 KHNPSQRPMLREVLE 260
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 57/305 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 99
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ FL
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKFL 154
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE-ETPEVHWEQSTTGTPLQS 544
+ K++VH DL N +L + ++DFGLAR D+ + E VH + TG L
Sbjct: 155 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVH---NKTGAKL-- 204
Query: 545 SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 205 -PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 251
Query: 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 252 TV-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVS 294
Query: 664 SLDRV 668
+ +
Sbjct: 295 RISAI 299
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 126
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRRA----------- 164
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
AL T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 165 ALCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 212
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 213 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 129
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 167
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 168 TLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 215
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 216 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 105/263 (39%), Gaps = 52/263 (19%)
Query: 374 LLGKSTIGIVYKVA---LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRA 430
+LGK + G V K E AV V + + E E + K+ HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
++ + G L I I + S D RIIK V GI ++H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 491 KRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
VH DL+P NILL K+ + I DFGL+ T Q +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLS--------------------TCFQQN-- 177
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM-----------I 596
T + +YY APE + +K D++S GVIL ++SG P +
Sbjct: 178 --TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
Query: 597 QIGSMELNIVQWIQLILEDRKPM 619
+ G ++ QW + I +D K +
Sbjct: 235 ETGKYAFDLPQW-RTISDDAKDL 256
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 64/324 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
Q++ A A L K V KVA+ ++ A + + +E E + I +H N
Sbjct: 35 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKN 87
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKA--GI-ISYRP-------LSWSDRLRI 474
I++L +I +Y G+L + + G+ SY P LS D +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VA+G+ +L + K+ +H DL N+L+ ++ I+DFGLAR DI +++
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHID---YYK 199
Query: 535 QSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GK 592
++T G P++ + APEA R T + D++S+GV+L E+ + G
Sbjct: 200 KTTNGRLPVK-----------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 242
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKS 651
P + EL +L+ E H +DK + L + + DC H
Sbjct: 243 SPYPGVPVEEL-----FKLLKE-------------GHRMDKPSNCTNELYMMMRDCWHAV 284
Query: 652 PDKRPSMRHVCDSLDRVNISTEQQ 675
P +RP+ + + + LDR+ T Q
Sbjct: 285 PSQRPTFKQLVEDLDRIVALTSNQ 308
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 125
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 163
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 164 TLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 211
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 212 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 255
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 64/324 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
Q++ A A L K V KVA+ ++ A + + +E E + I +H N
Sbjct: 32 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKN 84
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK--AGI-ISYRP-------LSWSDRLRI 474
I++L +I +Y G+L + + G+ SY P LS D +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VA+G+ +L + K+ +H DL N+L+ ++ I+DFGLAR DI +++
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHID---YYK 196
Query: 535 QSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GK 592
++T G P++ + APEA R T + D++S+GV+L E+ + G
Sbjct: 197 KTTNGRLPVK-----------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 239
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKS 651
P + EL +L+ E H +DK + L + + DC H
Sbjct: 240 SPYPGVPVEEL-----FKLLKE-------------GHRMDKPSNCTNELYMMMRDCWHAV 281
Query: 652 PDKRPSMRHVCDSLDRVNISTEQQ 675
P +RP+ + + + LDR+ T Q
Sbjct: 282 PSQRPTFKQLVEDLDRIVALTSNQ 305
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 105/263 (39%), Gaps = 52/263 (19%)
Query: 374 LLGKSTIGIVYKVA---LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRA 430
+LGK + G V K E AV V + + E E + K+ HPNI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
++ + G L I I + S D RIIK V GI ++H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 491 KRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
VH DL+P NILL K+ + I DFGL+ T Q +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLS--------------------TCFQQN-- 177
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM-----------I 596
T + +YY APE + +K D++S GVIL ++SG P +
Sbjct: 178 --TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
Query: 597 QIGSMELNIVQWIQLILEDRKPM 619
+ G ++ QW + I +D K +
Sbjct: 235 ETGKYAFDLPQW-RTISDDAKDL 256
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 113
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 168
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR D+ ++ E + + TG L
Sbjct: 169 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDK--EYYSVHNKTGAKL--- 218
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 219 PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 266
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 267 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 309
Query: 665 LDRV 668
+ +
Sbjct: 310 ISAI 313
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 57/305 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 94
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ FL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKFL 149
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR-LADIAEETPEVHWEQSTTGTPLQS 544
+ K++VH DL N +L + ++DFGLAR + D +E VH + TG L
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVH---NKTGAKL-- 199
Query: 545 SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 200 -PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 246
Query: 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 247 TV-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVS 289
Query: 664 SLDRV 668
+ +
Sbjct: 290 RISAI 294
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 64/324 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
Q++ A A L K V KVA+ ++ A + + +E E + I +H N
Sbjct: 43 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKN 95
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKA--GI-ISYRP-------LSWSDRLRI 474
I++L +I +Y G+L + + G+ SY P LS D +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VA+G+ +L + K+ +H DL N+L+ ++ I+DFGLAR DI +++
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHID---YYK 207
Query: 535 QSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GK 592
++T G P++ + APEA R T + D++S+GV+L E+ + G
Sbjct: 208 KTTNGRLPVK-----------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKS 651
P + EL +L+ E H +DK + L + + DC H
Sbjct: 251 SPYPGVPVEEL-----FKLLKE-------------GHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 652 PDKRPSMRHVCDSLDRVNISTEQQ 675
P +RP+ + + + LDR+ T Q
Sbjct: 293 PSQRPTFKQLVEDLDRIVALTSNQ 316
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 57/305 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 94
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ FL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKFL 149
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR-LADIAEETPEVHWEQSTTGTPLQS 544
+ K++VH DL N +L + ++DFGLAR + D +E VH + TG L
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVH---NKTGAKL-- 199
Query: 545 SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 200 -PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 246
Query: 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 247 TV-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVS 289
Query: 664 SLDRV 668
+ +
Sbjct: 290 RISAI 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 64/324 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
Q++ A A L K V KVA+ ++ A + + +E E + I +H N
Sbjct: 36 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKN 88
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKA--GI-ISYRP-------LSWSDRLRI 474
I++L +I +Y G+L + + G+ SY P LS D +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VA+G+ +L + K+ +H DL N+L+ ++ I+DFGLAR DI +++
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHID---YYK 200
Query: 535 QSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GK 592
++T G P++ + APEA R T + D++S+GV+L E+ + G
Sbjct: 201 KTTNGRLPVK-----------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 243
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKS 651
P + EL +L+ E H +DK + L + + DC H
Sbjct: 244 SPYPGVPVEEL-----FKLLKE-------------GHRMDKPSNCTNELYMMMRDCWHAV 285
Query: 652 PDKRPSMRHVCDSLDRVNISTEQQ 675
P +RP+ + + + LDR+ T Q
Sbjct: 286 PSQRPTFKQLVEDLDRIVALTSNQ 309
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 115/288 (39%), Gaps = 53/288 (18%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G+V + VA++ + G EF EA+ + + H +V L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+I +Y+ NG L + + L L + K V + + +L K+++
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---SKQFL 142
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+ +SDFGL+R EET V + P++ SP
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV-----GSKFPVRWSP-------- 189
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
PE K + K DI+++GV++ E+ S GK+P + + E +I Q ++L
Sbjct: 190 ---------PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 240
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659
P LA + V I C H+ D+RP+ +
Sbjct: 241 -----------YRPHLASE--------KVYTIMYSCWHEKADERPTFK 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 38/225 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY N + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 126
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
K+ +H D++P N+LLG E I+DFG + VH S
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRRA----------- 164
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
AL T Y PE + R +K D++S GV+ E + GK P
Sbjct: 165 ALCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 57/305 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 92
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ FL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKFL 147
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR-LADIAEETPEVHWEQSTTGTPLQS 544
+ K++VH DL N +L + ++DFGLAR + D +E VH + TG L
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVH---NKTGAKL-- 197
Query: 545 SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 198 -PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 244
Query: 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 245 TV-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVS 287
Query: 664 SLDRV 668
+ +
Sbjct: 288 RISAI 292
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 42/203 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL-----ATAIHGKAGI--- 460
+FQ EA + + +PNIV L L+++Y+ G L + + H +
Sbjct: 96 DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS 155
Query: 461 -ISYR---------PLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME 510
+S R PLS +++L I + VA G+A+L E +++VH DL N L+G+NM
Sbjct: 156 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMV 212
Query: 511 PHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR 570
I+DFGL+R A + + P++ P E N T+ S
Sbjct: 213 VKIADFGLSRNIYSA----DYYKADGNDAIPIRWMPPESIFYNRYTTES----------- 257
Query: 571 KPTQKWDIYSYGVILLEMISGKL 593
D+++YGV+L E+ S L
Sbjct: 258 ------DVWAYGVVLWEIFSYGL 274
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 34/187 (18%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G++ + + R ++
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG N E I+DFG +
Sbjct: 118 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS--------- 159
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S T L T Y PE + R +K D++S GV+ E
Sbjct: 160 --VHAPSSRR-----------TTLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
Query: 589 ISGKLPM 595
+ G P
Sbjct: 204 LVGMPPF 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 126
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 164
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 165 DLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 212
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 213 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 127
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 165
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 166 DLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 213
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 214 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 257
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 86
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 141
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR D+ ++ E + + TG L
Sbjct: 142 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDK--EYYSVHNKTGAKL--- 191
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 192 PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 239
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 240 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 282
Query: 665 LDRV 668
+ +
Sbjct: 283 ISAI 286
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 135/304 (44%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 112
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 167
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR D+ ++ E + + TG L
Sbjct: 168 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDK--EYYSVHNKTGAKL--- 217
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL E+ + +K T K D++S+GV+L E+++ G P + + ++
Sbjct: 218 PVKWMAL------------ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 265
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 266 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 308
Query: 665 LDRV 668
+ +
Sbjct: 309 ISAI 312
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G++ + + R ++
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG E I+DFG + A +
Sbjct: 115 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR- 164
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
T L+ T Y PE + R +K D++S GV+ E
Sbjct: 165 ---------------------TTLSGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
Query: 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P E N Q E K ++ + F + +++S L +
Sbjct: 201 LVGKPP------FEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL------L 242
Query: 649 HKSPDKRPSMRHVCD 663
+P +RP +R V +
Sbjct: 243 KHNPSQRPMLREVLE 257
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 92
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 147
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR D+ ++ E + + TG L
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDK--EYYSVHNKTGAKL--- 197
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 198 PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 245
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 246 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 288
Query: 665 LDRV 668
+ +
Sbjct: 289 ISAI 292
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 126
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 164
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 165 XLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 212
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 213 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 140/326 (42%), Gaps = 63/326 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
Q++ A A L K V KVA+ ++ A + + +E E + I +H N
Sbjct: 43 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKN 95
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK--AGI-ISYRP-------LSWSDRLRI 474
I++L +I +Y G+L + + G+ Y P LS D +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VA+G+ +L + K+ +H DL N+L+ ++ I+DFGLAR + + +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYY 206
Query: 535 QSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKL 593
+ TT L + APEA R T + D++S+GV+L E+ + G
Sbjct: 207 KKTTNGRLPVK---------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 594 PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSP 652
P + EL +L+ E H +DK + L + + DC H P
Sbjct: 252 PYPGVPVEEL-----FKLLKE-------------GHRMDKPSNCTNELYMMMRDCWHAVP 293
Query: 653 DKRPSMRHVCDSLDR-VNISTEQQFM 677
+RP+ + + + LDR V +++ Q+++
Sbjct: 294 SQRPTFKQLVEDLDRIVALTSNQEYL 319
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 94
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 149
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR D+ ++ E + + TG L
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDK--EYYSVHNKTGAKL--- 199
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 200 PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 247
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 248 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 290
Query: 665 LDRV 668
+ +
Sbjct: 291 ISAI 294
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 126
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 164
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 165 DLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 212
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 213 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 57/305 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 93
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 148
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE-ETPEVHWEQSTTGTPLQS 544
+ K++VH DL N +L + ++DFGLAR D+ + E VH + TG L
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVH---NKTGAKL-- 198
Query: 545 SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 199 -PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 245
Query: 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 246 TV-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVS 288
Query: 664 SLDRV 668
+ +
Sbjct: 289 RISAI 293
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 93
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 148
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR D+ ++ E + + TG L
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDK--EYYSVHNKTGAKL--- 198
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 199 PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 246
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 247 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 289
Query: 665 LDRV 668
+ +
Sbjct: 290 ISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 91
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 146
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR D+ ++ E + + TG L
Sbjct: 147 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDK--EYYSVHNKTGAKL--- 196
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 197 PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 244
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 245 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 287
Query: 665 LDRV 668
+ +
Sbjct: 288 ISAI 291
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 131
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S T
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------T 169
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 170 DLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 217
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 218 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 261
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 387 ALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW----SVDEKLLIY 442
L++ A++R+ Q +E Q EA+ HPNI+ L AY + E L+
Sbjct: 50 GLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109
Query: 443 DYIPNGSLATAIH---GKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLR 499
+ G+L I K ++ + W ++ G+ +G+ +H K Y H DL+
Sbjct: 110 PFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEAIH---AKGYAHRDLK 161
Query: 500 PSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRS 559
P+NILLG +P + D G A I H E S LQ ++ A T S
Sbjct: 162 PTNILLGDEGQPVLMDLGSMNQACI-------HVEGSRQALTLQ----DWAAQRCTIS-- 208
Query: 560 YYQAPEASKVRKPT---QKWDIYSYGVILLEMISGKLP 594
Y+APE V+ ++ D++S G +L M+ G+ P
Sbjct: 209 -YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 34/187 (18%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G++ + + R ++
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG N E I+DFG +
Sbjct: 118 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS--------- 159
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S T L T Y PE + R +K D++S GV+ E
Sbjct: 160 --VHAPSSRRDT-----------LCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
Query: 589 ISGKLPM 595
+ G P
Sbjct: 204 LVGMPPF 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 38/225 (16%)
Query: 375 LGKSTIGIVYK---VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+G+ G VY VA E VA+R++ + + E + + ++PNIV+
Sbjct: 28 IGQGASGTVYTAMDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
+ DE ++ +Y+ GSL +++ + + + + + FLH
Sbjct: 86 YLVGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---N 135
Query: 492 RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+ +H D++ NILLG + ++DFG A+ TPE + GTP
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPEQSKRSTMVGTP---------- 180
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
Y+ APE + K DI+S G++ +EMI G+ P +
Sbjct: 181 --------YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 89
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 144
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR D+ ++ E + + TG L
Sbjct: 145 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDK--EYYSVHNKTGAKL--- 194
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 195 PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 242
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 243 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 285
Query: 665 LDRV 668
+ +
Sbjct: 286 ISAI 289
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 55/304 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVR-------RLGNGGWQRFKEFQTEAEAIGKIRHPNIV 426
++G+ G VY L + + + R+ + G +F TE + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 94
Query: 427 SLRAY-FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
SL S L++ Y+ +G L I + ++ P + D + VAKG+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNP-TVKDLIGFGLQVAKGMKYL 149
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K++VH DL N +L + ++DFGLAR D+ ++ E + + TG L
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDK--EYYSVHNKTGAKL--- 199
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604
P ++ AL S ++ + T K D++S+GV+L E+++ G P + + ++
Sbjct: 200 PVKWMALESLQTQKF------------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 247
Query: 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
+ +L+ R+ +L P D + ++ L C H + RPS +
Sbjct: 248 V-----YLLQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRPSFSELVSR 290
Query: 665 LDRV 668
+ +
Sbjct: 291 ISAI 294
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 368 LKASAFLLGKST-IGIVYKVALNNEE----AVAVRRLGNGGWQRFK---EFQTEAEAIGK 419
+K ++LG + +G KV + E VAV+ L + + + E + +
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVA 479
RHP+I+ L + + ++ +Y+ G L I K G L + R+ + +
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNG-----RLDEKESRRLFQQIL 126
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
G+ + H VH DL+P N+LL +M I+DFGL+ + E + + + G
Sbjct: 127 SGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE------FLRXSCG 177
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
+P ++P S Y PE DI+S GVIL ++ G LP
Sbjct: 178 SPNYAAP-------EVISGRLYAGPEV----------DIWSSGVILYALLCGTLPF 216
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 102/255 (40%), Gaps = 52/255 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G + + + R ++
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG E I+DFG +
Sbjct: 119 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--------- 160
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S L T Y PE + R +K D++S GV+ E
Sbjct: 161 --VHAPSSRR-----------XXLXGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
Query: 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P E N Q E K ++ + F + +++S L +
Sbjct: 205 LVGKPP------FEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL------L 246
Query: 649 HKSPDKRPSMRHVCD 663
+P +RP +R V +
Sbjct: 247 KHNPSQRPMLREVLE 261
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 40/244 (16%)
Query: 375 LGKSTIGIVYKVALNN------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSL 428
LG+ G V+ +N + VAV+ L ++FQ EAE + ++H +IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAI--HGK-----AG--IISYRPLSWSDRLRIIKGVA 479
L++++Y+ +G L + HG AG ++ PL L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
G+ +L + +VH DL N L+G+ + I DFG++R DI + + + T
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIY--STDYYRVGGRTM 198
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQI 598
P++ P PE+ RK T + D++S+GV+L E+ + GK P Q+
Sbjct: 199 LPIRWMP-----------------PESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 241
Query: 599 GSME 602
+ E
Sbjct: 242 SNTE 245
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 55/231 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIRHP 423
+G+ T G+VYK + VA++R+ E E I ++ HP
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI---------RLDAEDEGIPSTAIREISLLKELHHP 79
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRI-IKGVAKGI 482
NIVSL S L+++++ K G+ +++I + + +G+
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGL-------QDSQIKIYLYQLLRGV 132
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
A H+ R +H DL+P N+L+ + ++DFGLAR G P+
Sbjct: 133 AHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLAR----------------AFGIPV 173
Query: 543 QSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+S +E L +Y+AP+ +K + DI+S G I EMI+GK
Sbjct: 174 RSYTHEVVTL-------WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 135/323 (41%), Gaps = 62/323 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
Q++ A A L K V KVA+ ++ A + + +E E + I +H N
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKN 80
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK--AGI-ISYRP-------LSWSDRLRI 474
I++L +I +Y G+L + + G+ Y P LS D +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VA+G+ +L + K+ +H DL N+L+ ++ I+DFGLAR + + +
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYY 191
Query: 535 QSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKL 593
+ TT L + APEA R T + D++S+GV+L E+ + G
Sbjct: 192 KKTTNGRLPVK---------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 236
Query: 594 PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSP 652
P + EL +L+ E H +DK + L + + DC H P
Sbjct: 237 PYPGVPVEEL-----FKLLKE-------------GHRMDKPSNCTNELYMMMRDCWHAVP 278
Query: 653 DKRPSMRHVCDSLDRVNISTEQQ 675
+RP+ + + + LDR+ T Q
Sbjct: 279 SQRPTFKQLVEDLDRIVALTSNQ 301
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 375 LGKSTIGIVYK---VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+G+ G VY VA E VA+R++ + + E + + ++PNIV+
Sbjct: 28 IGQGASGTVYTAMDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
+ DE ++ +Y+ GSL +++ + + + + + FLH
Sbjct: 86 YLVGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---N 135
Query: 492 RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+ +H D++ NILLG + ++DFG A+ TPE GTP
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPEQSKRSEMVGTP---------- 180
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
Y+ APE + K DI+S G++ +EMI G+ P +
Sbjct: 181 --------YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 55/231 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIRHP 423
+G+ T G+VYK + VA++R+ E E I ++ HP
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI---------RLDAEDEGIPSTAIREISLLKELHHP 79
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRI-IKGVAKGI 482
NIVSL S L+++++ K G+ +++I + + +G+
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGL-------QDSQIKIYLYQLLRGV 132
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
A H+ R +H DL+P N+L+ + ++DFGLAR G P+
Sbjct: 133 AHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLAR----------------AFGIPV 173
Query: 543 QSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+S +E L +Y+AP+ +K + DI+S G I EMI+GK
Sbjct: 174 RSYTHEVVTL-------WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 156/364 (42%), Gaps = 68/364 (18%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----A 393
D M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 13 DPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
VAV+ L + ++ + +E E + I +H NI++L +I +Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 452 TAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+L+ +N I+DFGLAR + + + TT L +
Sbjct: 187 NVLVTENNVMKIADFGLAR------DINNIDXXKKTTNGRLPVK---------------W 225
Query: 562 QAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMT 620
APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE------ 274
Query: 621 DILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV-NISTEQQFMK 678
H +DK + L + + DC H P +RP+ + + + LDR+ ++T ++++
Sbjct: 275 -------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
Query: 679 GEEP 682
+P
Sbjct: 328 LSQP 331
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 40/244 (16%)
Query: 375 LGKSTIGIVYKVALNN------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSL 428
LG+ G V+ +N + VAV+ L ++FQ EAE + ++H +IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAI--HGK-----AG--IISYRPLSWSDRLRIIKGVA 479
L++++Y+ +G L + HG AG ++ PL L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
G+ +L + +VH DL N L+G+ + I DFG++R DI + + + T
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIY--STDYYRVGGRTM 192
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQI 598
P++ P PE+ RK T + D++S+GV+L E+ + GK P Q+
Sbjct: 193 LPIRWMP-----------------PESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 235
Query: 599 GSME 602
+ E
Sbjct: 236 SNTE 239
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 57/303 (18%)
Query: 375 LGKSTIGIVYKVALNN------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSL 428
LG+ G V+ +N + VAV+ L ++FQ EAE + ++H +IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAI--HGK-----AG--IISYRPLSWSDRLRIIKGVA 479
L++++Y+ +G L + HG AG ++ PL L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
G+ +L + +VH DL N L+G+ + I DFG++R DI + + + T
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIY--STDYYRVGGRTM 221
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQI 598
P++ P PE+ RK T + D++S+GV+L E+ + GK P Q+
Sbjct: 222 LPIRWMP-----------------PESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 264
Query: 599 GSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658
+ E I I + R+ L E+ ++++ C + P +R S+
Sbjct: 265 SNTEA-----IDCITQGRE---------LERPRACPPEVYAIMR---GCWQREPQQRHSI 307
Query: 659 RHV 661
+ V
Sbjct: 308 KDV 310
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 156/364 (42%), Gaps = 68/364 (18%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----A 393
D M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 13 DPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
VAV+ L + ++ + +E E + I +H NI++L +I +Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 452 TAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+L+ +N I+DFGLAR + + + TT L +
Sbjct: 187 NVLVTENNVMKIADFGLAR------DINNIDXXKKTTNGRLPVK---------------W 225
Query: 562 QAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMT 620
APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE------ 274
Query: 621 DILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV-NISTEQQFMK 678
H +DK + L + + DC H P +RP+ + + + LDR+ ++T ++++
Sbjct: 275 -------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
Query: 679 GEEP 682
+P
Sbjct: 328 LSQP 331
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 135/323 (41%), Gaps = 62/323 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
Q++ A A L K V KVA+ ++ A + + +E E + I +H N
Sbjct: 43 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKN 95
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK--AGI-ISYRP-------LSWSDRLRI 474
I++L +I +Y G+L + + G+ S+ P LS D +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VA+G+ +L + K+ +H DL N+L+ ++ I+DFGLAR ++H
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR---------DIHHI 203
Query: 535 QSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKL 593
T P + + APEA R T + D++S+GV+L E+ + G
Sbjct: 204 DXXKKTTNGRLPVK------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 594 PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSP 652
P + EL +L+ E H +DK + L + + DC H P
Sbjct: 252 PYPGVPVEEL-----FKLLKE-------------GHRMDKPSNCTNELYMMMRDCWHAVP 293
Query: 653 DKRPSMRHVCDSLDRVNISTEQQ 675
+RP+ + + + LDR+ T Q
Sbjct: 294 SQRPTFKQLVEDLDRIVALTSNQ 316
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+ + E E +RHPNI+ L YF LI +Y P G++ + + R ++
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
I +A +++ H KR +H D++P N+LLG E I++FG +
Sbjct: 116 ------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS--------- 157
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
VH S T L T Y PE + R +K D++S GV+ E
Sbjct: 158 --VHAPSSRR-----------TTLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEF 201
Query: 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ GK P E N Q E K ++ + F + +++S L +
Sbjct: 202 LVGKPP------FEANTYQ------ETYKRISRVEFTFPDFVTEGARDLISRL------L 243
Query: 649 HKSPDKRPSMRHVCD 663
+P +RP +R V +
Sbjct: 244 KHNPSQRPMLREVLE 258
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 375 LGKSTIGIVYK---VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+G+ G VY VA E VA+R++ + + E + + ++PNIV+
Sbjct: 29 IGQGASGTVYTAMDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
+ DE ++ +Y+ GSL +++ + + + + + FLH
Sbjct: 87 YLVGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---N 136
Query: 492 RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+ +H D++ NILLG + ++DFG A+ TPE GTP
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPEQSKRSXMVGTP---------- 181
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
Y+ APE + K DI+S G++ +EMI G+ P +
Sbjct: 182 --------YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 218
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 375 LGKSTIGIVYK---VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+G+ G VY VA E VA+R++ + + E + + ++PNIV+
Sbjct: 28 IGQGASGTVYTAMDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
+ DE ++ +Y+ GSL +++ + + + + + FLH
Sbjct: 86 YLVGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---N 135
Query: 492 RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+ +H D++ NILLG + ++DFG A+ TPE GTP
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPEQSKRSXMVGTP---------- 180
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
Y+ APE + K DI+S G++ +EMI G+ P +
Sbjct: 181 --------YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 118/293 (40%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 129
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I++FG + VH S T
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWS-----------VHAPSSRR-----------T 167
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 168 TLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 215
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 216 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 53/229 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIRHP 423
+G+ T G+VYK N E A++++ + E E I +++H
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI---------RLEKEDEGIPSTTIREISILKELKHS 60
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIA 483
NIV L + +L+++++ + G+ S S+ +L GIA
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIA 114
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
+ H+ +R +H DL+P N+L+ + E I+DFGLAR G P++
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLAR----------------AFGIPVR 155
Query: 544 SSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISG 591
+E L +Y+AP+ +K + DI+S G I EM++G
Sbjct: 156 KYTHEIVTL-------WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 117/293 (39%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 128
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------X 166
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 167 XLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 214
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 215 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 258
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 38/225 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 152
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRRDD---------- 191
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
L T Y PE + R +K D++S GV+ E + GK P
Sbjct: 192 -LCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 44/238 (18%)
Query: 368 LKASAFLLGKST-IGIVYKVALNNEE----AVAVRRLGNGGWQRFK---EFQTEAEAIGK 419
+K ++LG + +G KV + + VAV+ L + + + E + +
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI--HGKAGIISYRPLSWSDRLRIIKG 477
RHP+I+ L + + ++ +Y+ G L I HG+ + R R+ +
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR--------RLFQQ 119
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ + + H VH DL+P N+LL +M I+DFGL+ + E + +++
Sbjct: 120 ILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE------FLRTS 170
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
G+P ++P S Y PE DI+S GVIL ++ G LP
Sbjct: 171 CGSPNYAAP-------EVISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 53/229 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIRHP 423
+G+ T G+VYK N E A++++ + E E I +++H
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI---------RLEKEDEGIPSTTIREISILKELKHS 60
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIA 483
NIV L + +L+++++ + G+ S S+ +L GIA
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIA 114
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
+ H+ +R +H DL+P N+L+ + E I+DFGLAR G P++
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLAR----------------AFGIPVR 155
Query: 544 SSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISG 591
+E L +Y+AP+ +K + DI+S G I EM++G
Sbjct: 156 KYTHEVVTL-------WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 53/229 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIRHP 423
+G+ T G+VYK N E A++++ + E E I +++H
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI---------RLEKEDEGIPSTTIREISILKELKHS 60
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIA 483
NIV L + +L+++++ + G+ S S+ +L GIA
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIA 114
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
+ H+ +R +H DL+P N+L+ + E I+DFGLAR G P++
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLAR----------------AFGIPVR 155
Query: 544 SSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISG 591
+E L +Y+AP+ +K + DI+S G I EM++G
Sbjct: 156 KYTHEVVTL-------WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 43/203 (21%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + ++ HPNI+ L +F L+ + G L I IS + S D
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAA 129
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETP 529
RII+ V GI ++H+ + VH DL+P N+LL K+ I DFGL+
Sbjct: 130 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------- 176
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT--QKWDIYSYGVILLE 587
H+E S + +YY APE V T +K D++S GVIL
Sbjct: 177 -THFEAS-------------KKMKDKIGTAYYIAPE---VLHGTYDEKCDVWSTGVILYI 219
Query: 588 MISGKLPMIQIGSMELNIVQWIQ 610
++SG P G+ E +I++ ++
Sbjct: 220 LLSGCPPF--NGANEYDILKKVE 240
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 53/288 (18%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G+V + VA++ + G EF EA+ + + H +V L
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+I +Y+ NG L + + L L + K V + + +L K+++
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYL---ESKQFL 122
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+ +SDFGL+R E T V + P++ SP
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFPVRWSP-------- 169
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
PE K + K DI+++GV++ E+ S GK+P + + E +I Q ++L
Sbjct: 170 ---------PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 220
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659
P LA + V I C H+ D+RP+ +
Sbjct: 221 -----------YRPHLASE--------KVYTIMYSCWHEKADERPTFK 249
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 53/288 (18%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G+V + VA++ + G EF EA+ + + H +V L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+I +Y+ NG L + + L L + K V + + +L K+++
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYL---ESKQFL 127
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+ +SDFGL+R E T V + P++ SP
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFPVRWSP-------- 174
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
PE K + K DI+++GV++ E+ S GK+P + + E +I Q ++L
Sbjct: 175 ---------PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 225
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659
P LA + V I C H+ D+RP+ +
Sbjct: 226 -----------YRPHLASE--------KVYTIMYSCWHEKADERPTFK 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 117/293 (39%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 126
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------X 164
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 165 XLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 212
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 213 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 117/293 (39%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 129
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRR-----------X 167
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 168 XLCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 215
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 216 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 43/203 (21%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + ++ HPNI+ L +F L+ + G L I IS + S D
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAA 152
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETP 529
RII+ V GI ++H+ + VH DL+P N+LL K+ I DFGL+
Sbjct: 153 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------- 199
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT--QKWDIYSYGVILLE 587
H+E S + +YY APE V T +K D++S GVIL
Sbjct: 200 -THFEAS-------------KKMKDKIGTAYYIAPE---VLHGTYDEKCDVWSTGVILYI 242
Query: 588 MISGKLPMIQIGSMELNIVQWIQ 610
++SG P G+ E +I++ ++
Sbjct: 243 LLSGCPPF--NGANEYDILKKVE 263
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 149/349 (42%), Gaps = 67/349 (19%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----A 393
D M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 13 DPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
VAV+ L + ++ + +E E + I +H NI++L +I +Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 452 TAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+L+ +N I+DFGLAR + + + ++TT L +
Sbjct: 187 NVLVTENNVMKIADFGLAR------DINNIDYYKNTTNGRLPVK---------------W 225
Query: 562 QAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMT 620
APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE------ 274
Query: 621 DILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 275 -------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 117/293 (39%), Gaps = 56/293 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY + + A++ L ++ + + E E +RHPNI+ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF LI +Y P G++ + + R ++ I +A +++ H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS--- 129
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
KR +H D++P N+LLG E I+DFG + VH S
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWS-----------VHAPSSRRDD---------- 168
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
L T Y PE + R +K D++S GV+ E + GK P E N Q
Sbjct: 169 -LCGTLD---YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP------FEANTYQ--- 215
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663
E K ++ + F + +++S L + +P +RP +R V +
Sbjct: 216 ---ETYKRISRVEFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 43/203 (21%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + ++ HPNI+ L +F L+ + G L I IS + S D
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAA 153
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETP 529
RII+ V GI ++H+ + VH DL+P N+LL K+ I DFGL+
Sbjct: 154 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------- 200
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT--QKWDIYSYGVILLE 587
H+E S + +YY APE V T +K D++S GVIL
Sbjct: 201 -THFEAS-------------KKMKDKIGTAYYIAPE---VLHGTYDEKCDVWSTGVILYI 243
Query: 588 MISGKLPMIQIGSMELNIVQWIQ 610
++SG P G+ E +I++ ++
Sbjct: 244 LLSGCPPF--NGANEYDILKKVE 264
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 53/288 (18%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G+V + VA++ + G EF EA+ + + H +V L
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+I +Y+ NG L + + L L + K V + + +L K+++
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---SKQFL 126
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+ +SDFGL+R E T V + P++ SP
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFPVRWSP-------- 173
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
PE K + K DI+++GV++ E+ S GK+P + + E +I Q ++L
Sbjct: 174 ---------PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 224
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659
P LA + V I C H+ D+RP+ +
Sbjct: 225 -----------YRPHLASE--------KVYTIMYSCWHEKADERPTFK 253
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 53/288 (18%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G+V + VA++ + G EF EA+ + + H +V L
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+I +Y+ NG L + + L L + K V + + +L K+++
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---SKQFL 133
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+ +SDFGL+R E T V + P++ SP
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFPVRWSP-------- 180
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
PE K + K DI+++GV++ E+ S GK+P + + E +I Q ++L
Sbjct: 181 ---------PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 231
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659
P LA + V I C H+ D+RP+ +
Sbjct: 232 -----------YRPHLASE--------KVYTIMYSCWHEKADERPTFK 260
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 153/350 (43%), Gaps = 69/350 (19%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----A 393
D M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 13 DPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
VAV+ L + ++ + +E E + I +H NI++L +I +Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 452 TAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSRSY 560
N+L+ +N I+DFGLAR + + +++++T G P++
Sbjct: 187 NVLVTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVK----------------- 224
Query: 561 YQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPM 619
+ APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE----- 274
Query: 620 TDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 275 --------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 153/350 (43%), Gaps = 69/350 (19%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----A 393
D M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 13 DPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
VAV+ L + ++ + +E E + I +H NI++L +I +Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 452 TAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSRSY 560
N+L+ +N I+DFGLAR + + +++++T G P++
Sbjct: 187 NVLVTENNVMRIADFGLARDINNID-----YYKKTTNGRLPVK----------------- 224
Query: 561 YQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPM 619
+ APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE----- 274
Query: 620 TDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 275 --------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 53/288 (18%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G+V + VA++ + G EF EA+ + + H +V L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+I +Y+ NG L + + L L + K V + + +L K+++
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---SKQFL 142
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554
H DL N L+ +SDFGL+R E T V + P++ SP
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFPVRWSP-------- 189
Query: 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWIQL 611
PE K + K DI+++GV++ E+ S GK+P + + E +I Q ++L
Sbjct: 190 ---------PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 240
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659
P LA + V I C H+ D+RP+ +
Sbjct: 241 -----------YRPHLASE--------KVYTIMYSCWHEKADERPTFK 269
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 368 LKASAFLLGKST-IGIVYKVALNNEE----AVAVRRLGNGGWQRFK---EFQTEAEAIGK 419
+K ++LG + +G KV + + VAV+ L + + + E + +
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI--HGKAGIISYRPLSWSDRLRIIKG 477
RHP+I+ L + + ++ +Y+ G L I HG+ + R R+ +
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR--------RLFQQ 119
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ + + H VH DL+P N+LL +M I+DFGL+ + E + + +
Sbjct: 120 ILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE------FLRDS 170
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
G+P ++P S Y PE DI+S GVIL ++ G LP
Sbjct: 171 CGSPNYAAP-------EVISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 38/225 (16%)
Query: 375 LGKSTIGIVYK---VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+G+ G VY VA E VA+R++ + + E + + ++PNIV+
Sbjct: 29 IGQGASGTVYTAMDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
+ DE ++ +Y+ GSL +++ + + + + + FLH
Sbjct: 87 YLVGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---N 136
Query: 492 RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+ +H +++ NILLG + ++DFG A+ TPE + GTP
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFC-----AQITPEQSKRSTMVGTP---------- 181
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
Y+ APE + K DI+S G++ +EMI G+ P +
Sbjct: 182 --------YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 218
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 133/299 (44%), Gaps = 59/299 (19%)
Query: 393 AVAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450
VAV+ L + ++ + +E E + I +H NI++L +I +Y G+L
Sbjct: 56 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 451 ATAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRP 500
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTA 172
Query: 501 SNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSRS 559
N+L+ +N I+DFGLAR + + +++++T G P++
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVK---------------- 211
Query: 560 YYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKP 618
+ APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 212 -WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE---- 261
Query: 619 MTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV-NISTEQQ 675
H +DK + L + + DC H P +RP+ + + + LDR+ ++T Q+
Sbjct: 262 ---------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNQE 311
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 31/202 (15%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
+E + E + ++HPNIV R F ++ DY G L I+ + G+ L
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGV-----LF 122
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527
D +I+ + L V ++ +H D++ NI L K+ + DFG+AR+ +
Sbjct: 123 QED--QILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN---- 176
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
V ++ GTP YY +PE + + K DI++ G +L E
Sbjct: 177 -STVELARACIGTP------------------YYLSPEICENKPYNNKSDIWALGCVLYE 217
Query: 588 MISGKLPMIQIGSMELNIVQWI 609
+ + K + GSM+ +++ I
Sbjct: 218 LCTLK-HAFEAGSMKNLVLKII 238
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 35/177 (19%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L F L+ + + G L I K + S ++ I++ +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK------KHFSETEASYIMRKLVSA 118
Query: 482 IAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETPEVHWEQSTT 538
++ +H+V VH DL+P N+L N+E I DFG ARL +
Sbjct: 119 VSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARL-------------KPPD 162
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
PL++ + +Y APE + D++S GVIL M+SG++P
Sbjct: 163 NQPLKTPCFTL----------HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 374 LLGKSTIGIVYKVALNNEEA-----VAVRRLG-NGGWQRFKEFQTEAEAIGKIRHPNIVS 427
+LG G VYK E VA++ L G + EF EA + + HP++V
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
L S +L + +P+G L +H K I S L+W + +AKG+ +L
Sbjct: 82 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 134
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
E +R VH DL N+L+ I+DFGLARL + E+ E + G + P
Sbjct: 135 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK------EYNADGGKM---P 182
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ AL E RK T + D++SYGV + E+++
Sbjct: 183 IKWMAL------------ECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 116/290 (40%), Gaps = 57/290 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG G+V + VA++ + G EF EA+ + + H +V L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
+I +Y+ NG L + + L L + K V + + +L K+++
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYL---ESKQFL 127
Query: 495 HGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT--PLQSSPYEFTAL 552
H DL N L+ +SDFGL+R E T S+ G+ P++ SP
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSRGSKFPVRWSP------ 174
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL--NIVQWI 609
PE K + K DI+++GV++ E+ S GK+P + + E +I Q +
Sbjct: 175 -----------PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659
+L P LA + V I C H+ D+RP+ +
Sbjct: 224 RL-----------YRPHLASE--------KVYTIMYSCWHEKADERPTFK 254
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 39/201 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + ++ HPNI+ L +F L+ + G L I IS + S D
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAA 135
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETP 529
RII+ V GI ++H+ + VH DL+P N+LL K+ I DFGL+
Sbjct: 136 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------- 182
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
H+E S + +YY APE +K D++S GVIL ++
Sbjct: 183 -THFEAS-------------KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILL 227
Query: 590 SGKLPMIQIGSMELNIVQWIQ 610
SG P G+ E +I++ ++
Sbjct: 228 SGCPPF--NGANEYDILKKVE 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 45/235 (19%)
Query: 375 LGKSTIGIVYKVA-LNNEEAVAVRRLGNGGWQRFKEFQ---TEAEAIGKIRHPNIVSLRA 430
+G + G VY + N E VA++++ G Q +++Q E + K+RHPN + R
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 431 YFWSVDEKLLIYDY-IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS 489
+ L+ +Y + + S +H K PL + + G +G+A+LH
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKK-------PLQEVEIAAVTHGALQGLAYLHS-- 133
Query: 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549
+H D++ NILL + + DFG A + A GTP
Sbjct: 134 -HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---------NXFVGTP-------- 175
Query: 550 TALNSTTSRSYYQAPEASKVRKPTQ---KWDIYSYGVILLEMISGKLPMIQIGSM 601
Y+ APE Q K D++S G+ +E+ K P+ + +M
Sbjct: 176 ----------YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 45/235 (19%)
Query: 375 LGKSTIGIVYKVA-LNNEEAVAVRRLGNGGWQRFKEFQ---TEAEAIGKIRHPNIVSLRA 430
+G + G VY + N E VA++++ G Q +++Q E + K+RHPN + R
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 431 YFWSVDEKLLIYDY-IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS 489
+ L+ +Y + + S +H K PL + + G +G+A+LH
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKK-------PLQEVEIAAVTHGALQGLAYLHS-- 172
Query: 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549
+H D++ NILL + + DFG A + A GTP
Sbjct: 173 -HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---------NXFVGTP-------- 214
Query: 550 TALNSTTSRSYYQAPEASKVRKPTQ---KWDIYSYGVILLEMISGKLPMIQIGSM 601
Y+ APE Q K D++S G+ +E+ K P+ + +M
Sbjct: 215 ----------YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 259
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 69/350 (19%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----A 393
D M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 13 DPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
VAV+ L + ++ + +E E + I +H NI+ L +I +Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 452 TAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSRSY 560
N+L+ +N I+DFGLAR + + +++++T G P++
Sbjct: 187 NVLVTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVK----------------- 224
Query: 561 YQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPM 619
+ APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE----- 274
Query: 620 TDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 275 --------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 374 LLGKSTIGIVYKVALNNEEA-----VAVRRLG-NGGWQRFKEFQTEAEAIGKIRHPNIVS 427
+LG G VYK E VA++ L G + EF EA + + HP++V
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
L S +L + +P+G L +H K I S L+W + +AKG+ +L
Sbjct: 105 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 157
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
E +R VH DL N+L+ I+DFGLARL + E+ E + G + P
Sbjct: 158 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK------EYNADGGKM---P 205
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ AL E RK T + D++SYGV + E+++
Sbjct: 206 IKWMAL------------ECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 69/350 (19%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----A 393
D M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 13 DPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
VAV+ L + + + +E E + I +H NI++L +I +Y G+L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 452 TAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSRSY 560
N+L+ +N I+DFGLAR + + +++++T G P++
Sbjct: 187 NVLVTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVK----------------- 224
Query: 561 YQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPM 619
+ APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE----- 274
Query: 620 TDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 275 --------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 69/350 (19%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----A 393
D M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 13 DPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
VAV+ L + ++ + +E E + I +H NI++L +I Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 452 TAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSRSY 560
N+L+ +N I+DFGLAR + + +++++T G P++
Sbjct: 187 NVLVTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVK----------------- 224
Query: 561 YQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPM 619
+ APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE----- 274
Query: 620 TDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 275 --------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 155/352 (44%), Gaps = 70/352 (19%)
Query: 341 LDT-MSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE---- 392
+DT M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 3 MDTPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGCFGQVVMAEAVGIDKDKPKEA 59
Query: 393 -AVAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449
VAV+ L + ++ + +E E + I +H NI++L +I +Y G+
Sbjct: 60 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 119
Query: 450 LATAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLR 499
L + + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 120 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLA 176
Query: 500 PSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSR 558
N+L+ +N I+DFGLAR + + +++++T G P++
Sbjct: 177 ARNVLVTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVK--------------- 216
Query: 559 SYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRK 617
+ APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 217 --WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE--- 266
Query: 618 PMTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 267 ----------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 51/232 (21%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRF---------KEFQTEAEAIGKIRHPNI 425
LG G+V++V R GN +F + + E + + +RHP +
Sbjct: 165 LGTGAFGVVHRVT--------ERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 426 VSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
V+L F +E ++IY+++ G L + + + +S + + ++ V KG+ +
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADE-----HNKMSEDEAVEYMRQVCKGLCHM 271
Query: 486 HEVSPKRYVHGDLRPSNILL--GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
HE YVH DL+P NI+ ++ E + DFGL D P Q
Sbjct: 272 HE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD-----------------PKQ 311
Query: 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
S + TT + + APE ++ + D++S GV+ ++SG P
Sbjct: 312 S-------VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 69/350 (19%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----A 393
D M + +YE +P D + +F ++L LG+ G V V ++ ++
Sbjct: 13 DPMLAGVSEYE-LPEDPKWEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
VAV+ L + ++ + +E E + I +H NI++L +I Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 452 TAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSRSY 560
N+L+ +N I+DFGLAR + + +++++T G P++
Sbjct: 187 NVLVTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVK----------------- 224
Query: 561 YQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPM 619
+ APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE----- 274
Query: 620 TDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 275 --------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 128/291 (43%), Gaps = 58/291 (19%)
Query: 393 AVAVRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450
VAV+ L + ++ + +E E + I +H NI++L +I +Y G+L
Sbjct: 58 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 451 ATAIHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRP 500
+ + + +++ D + +A+G+ +L + ++ +H DL
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 174
Query: 501 SNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSRS 559
N+L+ +N I+DFGLAR + + +++++T G P++
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVK---------------- 213
Query: 560 YYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKP 618
+ APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 214 -WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE---- 263
Query: 619 MTDILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 264 ---------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 51/232 (21%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRF---------KEFQTEAEAIGKIRHPNI 425
LG G+V++V R GN +F + + E + + +RHP +
Sbjct: 59 LGTGAFGVVHRVT--------ERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 426 VSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
V+L F +E ++IY+++ G L + + + +S + + ++ V KG+ +
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADE-----HNKMSEDEAVEYMRQVCKGLCHM 165
Query: 486 HEVSPKRYVHGDLRPSNILL--GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
HE YVH DL+P NI+ ++ E + DFGL D P Q
Sbjct: 166 HE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD-----------------PKQ 205
Query: 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
S + TT + + APE ++ + D++S GV+ ++SG P
Sbjct: 206 S-------VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 151/348 (43%), Gaps = 69/348 (19%)
Query: 344 MSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY---KVALNNEE-----AVA 395
M + +YE P D + +F ++L LG+ G V V ++ ++ VA
Sbjct: 61 MLAGVSEYEL-PEDPKWEFPRDKLTLGKP--LGEGCFGQVVMAEAVGIDKDKPKEAVTVA 117
Query: 396 VRRLGNGGWQR-FKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATA 453
V+ L + ++ + +E E + I +H NI++L +I +Y G+L
Sbjct: 118 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 177
Query: 454 IHGKA----------GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI 503
+ + + +++ D + +A+G+ +L + ++ +H DL N+
Sbjct: 178 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNV 234
Query: 504 LLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQ 562
L+ +N I+DFGLAR + + +++++T G P++ +
Sbjct: 235 LVTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVK-----------------WM 272
Query: 563 APEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTD 621
APEA R T + D++S+GV++ E+ + G P I EL +L+ E
Sbjct: 273 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-----FKLLKE------- 320
Query: 622 ILDPFLAHDLDKEDEIVSVLKIAL-DCVHKSPDKRPSMRHVCDSLDRV 668
H +DK + L + + DC H P +RP+ + + + LDR+
Sbjct: 321 ------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 374 LLGKSTIGIVYKV-ALNNEEAVAVRRLGNGGWQR---FKEFQTEAEAIGKIRHPNIVSLR 429
LLGK + VY+ +++ VA++ + + + Q E + +++HP+I+ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 430 AYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS 489
YF + L+ + NG + + + +P S ++ + + G+ +LH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLHS-- 130
Query: 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549
+H DL SN+LL +NM I+DFGLA + E H+ + GTP
Sbjct: 131 -HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK---HY--TLCGTP-------- 176
Query: 550 TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
Y +PE + + D++S G + ++ G+ P
Sbjct: 177 ----------NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 375 LGKSTIGIVYKVALNNEE---AVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
LG+ G+V++ ++ A+ RL N R K + E +A+ K+ HP IV Y
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR-EVKALAKLEHPGIVR---Y 68
Query: 432 F--W---SVDEKLL-----IYDYIP-----NGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
F W + EKL +Y YI +L ++G+ I S L I
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI---EERERSVCLHIFL 125
Query: 477 GVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQS 536
+A+ + FLH K +H DL+PSNI + + DFGL D E E+
Sbjct: 126 QIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE-------EEQ 175
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
T TP+ + + Y +PE + K DI+S G+IL E++
Sbjct: 176 TVLTPMPA----YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 43/203 (21%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + ++ HPNI L +F L+ + G L I IS + S D
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAA 129
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETP 529
RII+ V GI + H+ + VH DL+P N+LL K+ I DFGL+
Sbjct: 130 RIIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------- 176
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT--QKWDIYSYGVILLE 587
H+E S +YY APE V T +K D++S GVIL
Sbjct: 177 -THFEAS-------------KKXKDKIGTAYYIAPE---VLHGTYDEKCDVWSTGVILYI 219
Query: 588 MISGKLPMIQIGSMELNIVQWIQ 610
++SG P G+ E +I++ ++
Sbjct: 220 LLSGCPPF--NGANEYDILKKVE 240
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 38/234 (16%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNG------GWQRFKEFQTEAEAIGKIRHPNIVS 427
LGK GIV+K + E VAV+++ + + F+E E G H NIV+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG---HENIVN 73
Query: 428 LRAYFWSVDEK--LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
L + +++ L++DY + T +H +I L + ++ + K I +L
Sbjct: 74 LLNVLRADNDRDVYLVFDY-----METDLHA---VIRANILEPVHKQYVVYQLIKVIKYL 125
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL--- 542
H +H D++PSNILL ++DFGL+R V+ + T PL
Sbjct: 126 HSGG---LLHRDMKPSNILLNAECHVKVADFGLSR--------SFVNIRRVTNNIPLSIN 174
Query: 543 ---QSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
++ + L + +Y+APE K T+ D++S G IL E++ GK
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 40/231 (17%)
Query: 381 GIVYKVALNNEEAV--AVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK 438
G VYK A N E +V A + + + +++ E + + HPNIV L F+ +
Sbjct: 24 GKVYK-AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 82
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
++ ++ G++ + + RPL+ S + K + +LH+ + +H DL
Sbjct: 83 WILIEFCAGGAVDAVM-----LELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDL 134
Query: 499 RPSNILLGKNMEPHISDFGLARLADIAEET-PEVHWEQSTTGTPLQSSPYEFTALNSTTS 557
+ NIL + + ++DFG++ A+ T + S GTP
Sbjct: 135 KAGNILFTLDGDIKLADFGVS-----AKNTRTXIQRRDSFIGTP---------------- 173
Query: 558 RSYYQAP-----EASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
Y+ AP E SK R K D++S G+ L+EM + P ++ M +
Sbjct: 174 --YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 75/327 (22%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLG-NGGWQRFKEFQTEAEAIGKIRHPN 424
+++KA+AF L K G VAV+ L N ++ +E + ++ HP+
Sbjct: 38 KVVKATAFHL-KGRAGYT---------TVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGI------------------ISYRPL 466
++ L LLI +Y GSL + + R L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 467 SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526
+ D + +++G+ +L E+S VH DL NIL+ + + ISDFGL+R D+ E
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSR--DVYE 202
Query: 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586
E V Q P ++ A+ S Y T + D++S+GV+L
Sbjct: 203 EDSXVKRSQGRI-------PVKWMAIESLFDHIY------------TTQSDVWSFGVLLW 243
Query: 587 EMIS-GKLPMIQIGSMEL-NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV-SVLKI 643
E+++ G P I L N+++ H +++ D + ++
Sbjct: 244 EIVTLGGNPYPGIPPERLFNLLK-------------------TGHRMERPDNCSEEMYRL 284
Query: 644 ALDCVHKSPDKRPSMRHVCDSLDRVNI 670
L C + PDKRP + L+++ +
Sbjct: 285 MLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 40/209 (19%)
Query: 394 VAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
+ RRL + G R +E + E + +IRHPNI++L F + + +LI + + G L
Sbjct: 45 IKKRRLSSSRRGVSR-EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 103
Query: 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM- 509
+ K L+ + + +K + G+ +LH KR H DL+P NI LL KN+
Sbjct: 104 DFLAEKES------LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVP 154
Query: 510 EPHIS--DFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS 567
P I DFG+A + E + GTP EF APE
Sbjct: 155 NPRIKLIDFGIAHKIEAGNEFKNIF------GTP------EFV------------APEIV 190
Query: 568 KVRKPTQKWDIYSYGVILLEMISGKLPMI 596
+ D++S GVI ++SG P +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
+E + E + +IRHPNI++L F + + +LI + + G L + K L+
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK------ESLT 127
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ + +K + G+ +LH KR H DL+P NI LL KN+ P I DFG+A +
Sbjct: 128 EDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 185 AGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 220
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 221 ITYILLSGASPFL 233
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+ E + +RHP+I+ L S DE +++ +Y N I+ +S
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY-------IVQRDKMSEQ 113
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ R + + + + H + VH DL+P N+LL +++ I+DFGL+ +
Sbjct: 114 EARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI------MT 164
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ ++ +++ G+P ++P S Y PE D++S GVIL M+
Sbjct: 165 DGNFLKTSCGSPNYAAP-------EVISGKLYAGPEV----------DVWSCGVILYVML 207
Query: 590 SGKLP 594
+LP
Sbjct: 208 CRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 33/186 (17%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+ E + +RHP+I+ L S DE +++ +Y N I+ +S
Sbjct: 60 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY-------IVQRDKMSEQ 112
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ R + + + + H + VH DL+P N+LL +++ I+DFGL+ +
Sbjct: 113 EARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI------MT 163
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ ++ +++ G+P ++P S Y PE D++S GVIL M+
Sbjct: 164 DGNFLKTSCGSPNYAAP-------EVISGKLYAGPEV----------DVWSCGVILYVML 206
Query: 590 SGKLPM 595
+LP
Sbjct: 207 CRRLPF 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 375 LGKSTIGIV----YKVALNNEEA-VAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V Y +N A VAV++L + G + ++FQ E + + + IV R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 430 --AYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+Y E L+ +Y+P+G L + +A + + R L +S + + KG+ +L
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL- 127
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
+R VH DL NIL+ I+DFGLA+L + ++ V P QS
Sbjct: 128 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVR-------EPGQSP- 177
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ APE+ +++ D++S+GV+L E+ +
Sbjct: 178 ------------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 33/186 (17%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+ E + +RHP+I+ L S DE +++ +Y N I+ +S
Sbjct: 55 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY-------IVQRDKMSEQ 107
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ R + + + + H + VH DL+P N+LL +++ I+DFGL+ +
Sbjct: 108 EARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI------MT 158
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ ++ +++ G+P ++P S Y PE D++S GVIL M+
Sbjct: 159 DGNFLKTSCGSPNYAAP-------EVISGKLYAGPEV----------DVWSCGVILYVML 201
Query: 590 SGKLPM 595
+LP
Sbjct: 202 CRRLPF 207
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA+R++ Q + + E + + + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 188
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 370 ASAFLLGKSTIGIV-YKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSL 428
A+ +G+ + GIV + + VAV+++ QR + E + H N+V +
Sbjct: 48 ANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEV 488
+ + DE ++ +++ G+L I+++ ++ + V + +++LH
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTD-------IVTHTRMNEEQIATVCLSVLRALSYLHN- 159
Query: 489 SPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYE 548
+ +H D++ +ILL + +SDFG A +++E P+ + GTP
Sbjct: 160 --QGVIHRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPK---RKXLVGTP------- 205
Query: 549 FTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
Y+ APE + DI+S G++++EMI G+ P
Sbjct: 206 -----------YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 33/186 (17%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+ E + +RHP+I+ L S DE +++ +Y N I+ +S
Sbjct: 51 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY-------IVQRDKMSEQ 103
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ R + + + + H + VH DL+P N+LL +++ I+DFGL+ +
Sbjct: 104 EARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI------MT 154
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ ++ +++ G+P ++P S Y PE D++S GVIL M+
Sbjct: 155 DGNFLKTSCGSPNYAAP-------EVISGKLYAGPEV----------DVWSCGVILYVML 197
Query: 590 SGKLPM 595
+LP
Sbjct: 198 CRRLPF 203
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 40/209 (19%)
Query: 394 VAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451
+ RRL + G R +E + E + +IRHPNI++L F + + +LI + + G L
Sbjct: 38 IKKRRLSSSRRGVSR-EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 96
Query: 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM- 509
+ K L+ + + +K + G+ +LH KR H DL+P NI LL KN+
Sbjct: 97 DFLAEKES------LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVP 147
Query: 510 EPHIS--DFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS 567
P I DFG+A + E + GTP EF APE
Sbjct: 148 NPRIKLIDFGIAHKIEAGNEFKNIF------GTP------EFV------------APEIV 183
Query: 568 KVRKPTQKWDIYSYGVILLEMISGKLPMI 596
+ D++S GVI ++SG P +
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPFL 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 58/235 (24%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
++G + G+V++ L + VA++++ +RFK E + + ++HPN+V L+A+F+
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQD--KRFK--NRELQIMRIVKHPNVVDLKAFFY 102
Query: 434 SVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK----GVAKGIA 483
S +K L+ +Y+P + H Y L + + +IK + + +A
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRH-------YAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEP-----HISDFGLARLADIAEETPEVHWEQSTT 538
++H + H D++P N+LL +P + DFG A++ E P V
Sbjct: 156 YIHSIG---ICHRDIKPQNLLL----DPPSGVLKLIDFGSAKILIAGE--PNV------- 199
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
S YY+APE T DI+S G ++ E++ G+
Sbjct: 200 ---------------SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 122/303 (40%), Gaps = 54/303 (17%)
Query: 360 VDFDLEQLLKASAFLLGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
+++D E +LGK T GIVY L+N+ +A++ + + + E
Sbjct: 15 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 74
Query: 419 KIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL--RIIK 476
++H NIV F + + +P GSL+ + K G PL +++ K
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG-----PLKDNEQTIGFYTK 129
Query: 477 GVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLA-RLADIAEETPEVHWE 534
+ +G+ +LH+ + VH D++ N+L+ + ISDFG + RLA I T
Sbjct: 130 QILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT------ 180
Query: 535 QSTTGTPLQSSPYEFTALNSTTSRSYYQAPEA--SKVRKPTQKWDIYSYGVILLEMISGK 592
++ TGT LQ Y APE R + DI+S G ++EM +GK
Sbjct: 181 ETFTGT-LQ-----------------YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSP 652
P ++G + + + + F H E L C P
Sbjct: 223 PPFYELGEPQAAMFK---------------VGMFKVHPEIPESMSAEAKAFILKCFEPDP 267
Query: 653 DKR 655
DKR
Sbjct: 268 DKR 270
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 45/196 (22%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-----HGKAGIIS 462
++ + E E + + HPNI+ + F ++ + G L I GKA
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA---- 120
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH----ISDFGL 518
LS ++K + +A+ H + VH DL+P NIL ++ PH I DFGL
Sbjct: 121 ---LSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILF-QDTSPHSPIKIIDFGL 173
Query: 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDI 578
A L E + + GT L Y APE K R T K DI
Sbjct: 174 AELFKSDEHST------NAAGTAL------------------YMAPEVFK-RDVTFKCDI 208
Query: 579 YSYGVILLEMISGKLP 594
+S GV++ +++G LP
Sbjct: 209 WSAGVVMYFLLTGCLP 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 70/300 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAV-------RRLGNGGWQRFKEFQTEAEAIGKIRHPNIVS 427
+G+ + VYK L+ E V V R+L QRFKE EAE + ++HPNIV
Sbjct: 34 IGRGSFKTVYK-GLDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIV- 88
Query: 428 LRAY-FWSVDEK-----LLIYDYIPNGSLATAIHGKAGIISYRPL-SWSDRLRIIKGVAK 480
R Y W K +L+ + +G+L T + + + + L SW + + K
Sbjct: 89 -RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLK-RFKVXKIKVLRSWC------RQILK 140
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILL-GKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
G+ FLH +P +H DL+ NI + G I D GLA L + ++ G
Sbjct: 141 GLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL-------KRASFAKAVIG 192
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599
TP + APE + K + D+Y++G LE + + P +
Sbjct: 193 TP------------------EFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQ 233
Query: 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659
N Q + + KP + DK I V +I C+ ++ D+R S++
Sbjct: 234 ----NAAQIYRRVTSGVKPAS----------FDKV-AIPEVKEIIEGCIRQNKDERYSIK 278
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 122/303 (40%), Gaps = 54/303 (17%)
Query: 360 VDFDLEQLLKASAFLLGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
+++D E +LGK T GIVY L+N+ +A++ + + + E
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 419 KIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL--RIIK 476
++H NIV F + + +P GSL+ + K G PL +++ K
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG-----PLKDNEQTIGFYTK 115
Query: 477 GVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLA-RLADIAEETPEVHWE 534
+ +G+ +LH+ + VH D++ N+L+ + ISDFG + RLA I T
Sbjct: 116 QILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT------ 166
Query: 535 QSTTGTPLQSSPYEFTALNSTTSRSYYQAPEA--SKVRKPTQKWDIYSYGVILLEMISGK 592
++ TGT LQ Y APE R + DI+S G ++EM +GK
Sbjct: 167 ETFTGT-LQ-----------------YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSP 652
P ++G + + + + F H E L C P
Sbjct: 209 PPFYELGEPQAAMFK---------------VGMFKVHPEIPESMSAEAKAFILKCFEPDP 253
Query: 653 DKR 655
DKR
Sbjct: 254 DKR 256
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 38/198 (19%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HP+I++L + S L++D + G L + K LS + I++ + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA------LSEKETRSIMRSLLEA 212
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
++FLH VH DL+P NILL NM+ +SDFG + + E+ E+ GTP
Sbjct: 213 VSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL------CGTP 263
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP------- 594
+P T Y ++ D+++ GVIL +++G P
Sbjct: 264 GYLAPEILKCSMDETHPGY------------GKEVDLWACGVILFTLLAGSPPFWHRRQI 311
Query: 595 ----MIQIGSMELNIVQW 608
MI G + + +W
Sbjct: 312 LMLRMIMEGQYQFSSPEW 329
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDE----KLLIYDYIPNGSLATAIHGKAGIISY 463
K E + HPNI+ LR F +E KL + + LA IH + +IS
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523
+ + + + + G+ LHE VH DL P NILL N + I DF LAR
Sbjct: 134 QHIQY-----FMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR--- 182
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYG 582
E+T + + T +Y+APE + + T+ D++S G
Sbjct: 183 --EDTADANKTHYVT-------------------HRWYRAPELVMQFKGFTKLVDMWSAG 221
Query: 583 VILLEMISGK 592
++ EM + K
Sbjct: 222 CVMAEMFNRK 231
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 131/327 (40%), Gaps = 75/327 (22%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLG-NGGWQRFKEFQTEAEAIGKIRHPN 424
+++KA+AF L K G VAV+ L N ++ +E + ++ HP+
Sbjct: 38 KVVKATAFHL-KGRAGYT---------TVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGI------------------ISYRPL 466
++ L LLI +Y GSL + + R L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 467 SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526
+ D + +++G+ +L E+ + VH DL NIL+ + + ISDFGL+R D+ E
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSR--DVYE 202
Query: 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586
E V Q P ++ A+ S Y T + D++S+GV+L
Sbjct: 203 EDSXVKRSQGRI-------PVKWMAIESLFDHIY------------TTQSDVWSFGVLLW 243
Query: 587 EMIS-GKLPMIQIGSMEL-NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV-SVLKI 643
E+++ G P I L N+++ H +++ D + ++
Sbjct: 244 EIVTLGGNPYPGIPPERLFNLLK-------------------TGHRMERPDNCSEEMYRL 284
Query: 644 ALDCVHKSPDKRPSMRHVCDSLDRVNI 670
L C + PDKRP + L+++ +
Sbjct: 285 MLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDE----KLLIYDYIPNGSLATAIHGKAGIISY 463
K E + HPNI+ LR F +E KL + + LA IH + +IS
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523
+ + + + + G+ LHE VH DL P NILL N + I DF LAR
Sbjct: 134 QHIQY-----FMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR--- 182
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYG 582
E+T + + T +Y+APE + + T+ D++S G
Sbjct: 183 --EDTADANKTHYVT-------------------HRWYRAPELVMQFKGFTKLVDMWSAG 221
Query: 583 VILLEMISGK 592
++ EM + K
Sbjct: 222 CVMAEMFNRK 231
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 36/246 (14%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYF 432
LG G+V+KV+ V R+L + + Q E + + + P IV F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+S E + +++ GSL + KAG I + L ++ V KG+ +L E +
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLTYLRE--KHK 144
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++PSNIL+ E + DFG+ +G + S F
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGV-------------------SGQLIDSMANSFVGT 185
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLI 612
S Y +PE + + + DI+S G+ L+EM G+ P I GS + I + + I
Sbjct: 186 RS------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IGSGSGSMAIFELLDYI 238
Query: 613 LEDRKP 618
+ + P
Sbjct: 239 VNEPPP 244
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 45/204 (22%)
Query: 465 PLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524
P++ D + VA+G+ FL S ++ +H DL NILL +N I DFGLAR DI
Sbjct: 195 PITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLAR--DI 249
Query: 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVI 584
+ V + T PL+ + APE+ + + K D++SYGV+
Sbjct: 250 YKNPDYVR--KGDTRLPLK-----------------WMAPESIFDKIYSTKSDVWSYGVL 290
Query: 585 LLEMIS---GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVL 641
L E+ S P +Q M+ + ++ + R P E +
Sbjct: 291 LWEIFSLGGSPYPGVQ---MDEDFCSRLREGMRMRAP---------------EYSTPEIY 332
Query: 642 KIALDCVHKSPDKRPSMRHVCDSL 665
+I LDC H+ P +RP + + L
Sbjct: 333 QIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 38/233 (16%)
Query: 374 LLGKSTIGIVYKVALN---NEEAVAVRRLGNGGWQRFKEFQTEAEAIGK----IR----H 422
+LG+ +V + E AV + + GG +E Q EA K +R H
Sbjct: 11 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 70
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
PNI+ L+ + + L++D + G L + K LS + +I++ + + I
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVI 124
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
LH+++ VH DL+P NILL +M ++DFG + D E+ EV GTP
Sbjct: 125 CALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV------CGTPS 175
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
+P E + + Y ++ D++S GVI+ +++G P
Sbjct: 176 YLAP-EIIECSMNDNHPGY-----------GKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 131/327 (40%), Gaps = 75/327 (22%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLG-NGGWQRFKEFQTEAEAIGKIRHPN 424
+++KA+AF L K G VAV+ L N ++ +E + ++ HP+
Sbjct: 38 KVVKATAFHL-KGRAGYT---------TVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGI------------------ISYRPL 466
++ L LLI +Y GSL + + R L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 467 SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526
+ D + +++G+ +L E+ + VH DL NIL+ + + ISDFGL+R D+ E
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSR--DVYE 202
Query: 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586
E V Q P ++ A+ S Y T + D++S+GV+L
Sbjct: 203 EDSYVKRSQGRI-------PVKWMAIESLFDHIY------------TTQSDVWSFGVLLW 243
Query: 587 EMIS-GKLPMIQIGSMEL-NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV-SVLKI 643
E+++ G P I L N+++ H +++ D + ++
Sbjct: 244 EIVTLGGNPYPGIPPERLFNLLK-------------------TGHRMERPDNCSEEMYRL 284
Query: 644 ALDCVHKSPDKRPSMRHVCDSLDRVNI 670
L C + PDKRP + L+++ +
Sbjct: 285 MLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 28/201 (13%)
Query: 394 VAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452
VA++++ Q + + E + + + RH N++ +R + + + YI + T
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512
++ ++ + LS + + +G+ ++H + +H DL+PSN+L+ +
Sbjct: 131 DLYK---LLKSQQLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLK 184
Query: 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP 572
I DFGLAR+AD E TG L + +Y+APE K
Sbjct: 185 ICDFGLARIADP---------EHDHTG-----------FLTEXVATRWYRAPEIMLNSKG 224
Query: 573 -TQKWDIYSYGVILLEMISGK 592
T+ DI+S G IL EM+S +
Sbjct: 225 YTKSIDIWSVGCILAEMLSNR 245
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 37/224 (16%)
Query: 375 LGKSTIGIV----YKVALNNEEA-VAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V Y +N A VAV++L + G + ++FQ E + + + IV R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+ + L+ +Y+P+G L + +A + + R L +S + + KG+ +L
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL- 131
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
+R VH DL NIL+ I+DFGLA+L + ++
Sbjct: 132 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY------------------ 171
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ S ++ APE+ +++ D++S+GV+L E+ +
Sbjct: 172 --YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK---LLKCQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 188
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 182
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 183 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 182
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 183 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 152
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 192
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 193 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 184
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 37/224 (16%)
Query: 375 LGKSTIGIV----YKVALNNEEA-VAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V Y +N A VAV++L + G + ++FQ E + + + IV R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+ + L+ +Y+P+G L + +A + + R L +S + + KG+ +L
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL- 143
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
+R VH DL NIL+ I+DFGLA+L + ++
Sbjct: 144 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY------------------ 183
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ S ++ APE+ +++ D++S+GV+L E+ +
Sbjct: 184 --YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 49/257 (19%)
Query: 374 LLGKSTIGIVYKVALN---NEEAVAVRRLGNGGWQRFKEFQTEAEAIGK----IR----H 422
+LG+ +V + E AV + + GG +E Q EA K +R H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
PNI+ L+ + + L++D + G L + K LS + +I++ + + I
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVI 137
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
LH+++ VH DL+P NILL +M ++DFG + D E+ EV GTP
Sbjct: 138 CALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV------CGTPS 188
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP-------- 594
+P E + + Y ++ D++S GVI+ +++G P
Sbjct: 189 YLAP-EIIECSMNDNHPGY-----------GKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 595 ---MIQIGSMELNIVQW 608
MI G+ + +W
Sbjct: 237 MLRMIMSGNYQFGSPEW 253
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 189
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 190 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 150
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 190
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 191 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 141
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 181
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 182 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 188
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 188
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 189 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 189
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 190 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 184
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 37/224 (16%)
Query: 375 LGKSTIGIV----YKVALNNEEA-VAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK G V Y +N A VAV++L + G + ++FQ E + + + IV R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 430 AYFWSVDEK--LLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+ + L+ +Y+P+G L + +A + + R L +S + + KG+ +L
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL- 130
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
+R VH DL NIL+ I+DFGLA+L + ++
Sbjct: 131 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY------------------ 170
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ S ++ APE+ +++ D++S+GV+L E+ +
Sbjct: 171 --YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 100/237 (42%), Gaps = 37/237 (15%)
Query: 374 LLGKSTIGIVYK-----VALNNEEAVAVRRL-GNGGWQRFKEFQTEAEAIGKIRHPNIVS 427
+LG G VYK N + VA++ L N + KE EA + + P +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487
L + +L + +P G L + G L D L +AKG+++L +
Sbjct: 84 LLGICLTSTVQL-VTQLMPYGCLLDHVRENRG-----RLGSQDLLNWCMQIAKGMSYLED 137
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
V R VH DL N+L+ I+DFGLARL DI E E H + P
Sbjct: 138 V---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET--EYHADGGKV-------PI 185
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
++ AL S R + T + D++SYGV + E+++ G P I + E+
Sbjct: 186 KWMALESILRRRF------------THQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 186
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---------DHDHTG-----------FL 184
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 32/184 (17%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+ E + + ++ HP IV L F + + LI D++ G L T + + + D
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV------MFTEED 128
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
+ +A + LH + ++ DL+P NILL + ++DFGL++
Sbjct: 129 VKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---------- 175
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+S +E A S Y APE R TQ D +S+GV++ EM++
Sbjct: 176 ------------ESIDHEKKAY-SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 222
Query: 591 GKLP 594
G LP
Sbjct: 223 GTLP 226
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---------DHDHTG-----------FL 188
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 164
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTG-----------FL 204
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 32/184 (17%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+ E + + ++ HP IV L F + + LI D++ G L T + + + D
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV------MFTEED 127
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
+ +A + LH + ++ DL+P NILL + ++DFGL++
Sbjct: 128 VKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---------- 174
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+S +E A S Y APE R TQ D +S+GV++ EM++
Sbjct: 175 ------------ESIDHEKKAY-SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
Query: 591 GKLP 594
G LP
Sbjct: 222 GTLP 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQ-TEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---------DHDHTG-----------FL 188
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 62/282 (21%)
Query: 394 VAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK---LLIYDYIPNGSL 450
VAV+ + N + F EA + ++RH N+V L V+EK ++ +Y+ GSL
Sbjct: 32 VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSL 87
Query: 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME 510
+ + + L L+ V + + +L +VH DL N+L+ ++
Sbjct: 88 VDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNV 140
Query: 511 PHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR 570
+SDFGL + A ++T ++ P ++T APEA + +
Sbjct: 141 AKVSDFGLTKEASSTQDTGKL--------------PVKWT------------APEALREK 174
Query: 571 KPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPF-LA 628
K + K D++S+G++L E+ S G++P +I P+ D++
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGRVPYPRI-------------------PLKDVVPRVEKG 215
Query: 629 HDLDKEDEI-VSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669
+ +D D +V ++ +C H RPS + + L+ +
Sbjct: 216 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 129 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 178
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 179 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 219
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 220 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 260
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 261 IDADSRPKFREL 272
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 62/269 (23%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK---LLIYDYIPNGSLATAIHGKAGIISYR 464
+ F EA + ++RH N+V L V+EK ++ +Y+ GSL + + +
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--- 113
Query: 465 PLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524
L L+ V + + +L +VH DL N+L+ ++ +SDFGL + A
Sbjct: 114 -LGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169
Query: 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVI 584
++T ++ P ++T APEA + +K + K D++S+G++
Sbjct: 170 TQDTGKL--------------PVKWT------------APEALREKKFSTKSDVWSFGIL 203
Query: 585 LLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFL--AHDLDKEDEI-VSV 640
L E+ S G++P +I P+ D++ P + + +D D +V
Sbjct: 204 LWEIYSFGRVPYPRI-------------------PLKDVV-PRVEKGYKMDAPDGCPPAV 243
Query: 641 LKIALDCVHKSPDKRPSMRHVCDSLDRVN 669
++ +C H RPS + + L+ +
Sbjct: 244 YEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---------DHDHTG-----------FL 184
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 12 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 129
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 130 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 179
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 180 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 220
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 221 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 261
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 262 IDADSRPKFREL 273
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+ E + + ++ HP IV L F + + LI D++ G L T + + + D
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV------MFTEED 127
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
+ +A + LH + ++ DL+P NILL + ++DFGL++
Sbjct: 128 VKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---------- 174
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+S +E A S Y APE R TQ D +S+GV++ EM++
Sbjct: 175 ------------ESIDHEKKAY-SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
Query: 591 GKLPM 595
G LP
Sbjct: 222 GTLPF 226
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 175
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 176 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 216
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 217 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 257
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 258 IDADSRPKFREL 269
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 58/235 (24%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA------------IGKIRH 422
LG T VYK LN V V KE + ++E + +++H
Sbjct: 13 LGNGTYATVYK-GLNKTTGVYVA---------LKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK----GV 478
NIV L + ++ L+++++ N L + + + R L L ++K +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLE----LNLVKYFQWQL 117
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTT 538
+G+AF HE + +H DL+P N+L+ K + + DFGLAR
Sbjct: 118 LQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLAR----------------AF 158
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
G P+ + E L +Y+AP+ R + DI+S G IL EMI+GK
Sbjct: 159 GIPVNTFSSEVVTL-------WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 177
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 178 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 218
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 219 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 259
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 260 IDADSRPKFREL 271
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 9 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 126
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 127 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 176
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 177 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 217
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 218 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 258
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 259 IDADSRPKFREL 270
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 33 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 92
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 150
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 151 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 200
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 201 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 241
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 242 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 282
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 283 IDADSRPKFREL 294
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 175
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 176 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 216
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 217 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 257
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 258 IDADSRPKFREL 269
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 40/233 (17%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEE----AVAVRRLGNGGWQRFKEFQTEAEAIGKIR 421
+LL S +G+ + GIV L E+ VAV+ + QR + E + +
Sbjct: 44 RLLLDSYVKIGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
H N+V + + +E ++ +++ G+L I+S L+ + + V +
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALT-------DIVSQVRLNEEQIATVCEAVLQA 153
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+A+LH + +H D++ +ILL + +SDFG A I+++ P+ + GTP
Sbjct: 154 LAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPK---RKXLVGTP 205
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
+P SRS Y A++V DI+S G++++EM+ G+ P
Sbjct: 206 YWMAP-------EVISRSLY----ATEV-------DIWSLGIMVIEMVDGEPP 240
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 97/242 (40%), Gaps = 43/242 (17%)
Query: 368 LKASAFL--LGKSTIGIVYKVAL------NNEEAVAVRRLGNGGWQRFKE-FQTEAEAIG 418
L A F+ LG+ G VYK L +AVA++ L + +E F+ EA
Sbjct: 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 84
Query: 419 KIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-----HGKAGIIS-----YRPLSW 468
+++HPN+V L +I+ Y +G L + H G L
Sbjct: 85 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 144
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
D + ++ +A G+ +L S VH DL N+L+ + ISD GL R A+
Sbjct: 145 PDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD-- 199
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
+ L ++ + APEA K + DI+SYGV+L E+
Sbjct: 200 -------------------YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
Query: 589 IS 590
S
Sbjct: 241 FS 242
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 49/257 (19%)
Query: 374 LLGKSTIGIVYKVALN---NEEAVAVRRLGNGGWQRFKEFQTEAEAIGK----IR----H 422
+LG+ +V + E AV + + GG +E Q EA K +R H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
PNI+ L+ + + L++D + G L + K LS + +I++ + + I
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVI 137
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
LH+++ VH DL+P NILL +M ++DFG + D E+ +S GTP
Sbjct: 138 CALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL------RSVCGTPS 188
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP-------- 594
+P E + + Y ++ D++S GVI+ +++G P
Sbjct: 189 YLAP-EIIECSMNDNHPGY-----------GKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 595 ---MIQIGSMELNIVQW 608
MI G+ + +W
Sbjct: 237 MLRMIMSGNYQFGSPEW 253
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 177
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 178 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 218
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 219 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 259
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 260 IDADSRPKFREL 271
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADP---------DHDHTG-----------FL 184
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 14 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 131
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 132 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 181
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 182 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 222
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 223 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 263
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 264 IDADSRPKFREL 275
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 129 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 178
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 179 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 219
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 220 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 260
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 261 IDADSRPKFREL 272
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 129 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 178
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 179 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 219
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 220 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 260
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 261 IDADSRPKFREL 272
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 49/237 (20%)
Query: 375 LGKSTIGIVYKV-ALNNEEAVAVRRLGNGGWQRFKEFQ---TEAEAIGKIRHPNIVSLRA 430
LG + G V+ + + +N A++ L R K+ + E + + HP I+ +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF-----L 485
F + +I DYI G L + + R VAK A L
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQ--------------RFPNPVAKFYAAEVCLAL 119
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
+ K ++ DL+P NILL KN I+DFG A+ P+V + GTP
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV------PDVTY--XLCGTPD--- 168
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602
Y APE + + D +S+G+++ EM++G P +M+
Sbjct: 169 ---------------YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 41/209 (19%)
Query: 394 VAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK---LLIYDYIPNGSL 450
VAV+ + N + F EA + ++RH N+V L V+EK ++ +Y+ GSL
Sbjct: 219 VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSL 274
Query: 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME 510
+ + + L L+ V + + +L +VH DL N+L+ ++
Sbjct: 275 VDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNV 327
Query: 511 PHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR 570
+SDFGL + A ++T ++ P ++T APEA + +
Sbjct: 328 AKVSDFGLTKEASSTQDTGKL--------------PVKWT------------APEALREK 361
Query: 571 KPTQKWDIYSYGVILLEMIS-GKLPMIQI 598
K + K D++S+G++L E+ S G++P +I
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVPYPRI 390
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYF 432
LG G+V+KV+ V R+L + + Q E + + + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+S E + +++ GSL + KAG I + L ++ V KG+ +L E +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLTYLRE--KHK 125
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++PSNIL+ E + DFG+ +G + S F
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGV-------------------SGQLIDSMANSFVGT 166
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
S Y +PE + + + DI+S G+ L+EM G+ P+ + EL ++ Q+
Sbjct: 167 RS------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 15 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 132
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 133 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 182
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 183 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 223
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 224 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 264
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 265 IDADSRPKFREL 276
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+ E + + + HP +V L F + + LI D++ G L T + + + D
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV------MFTEED 131
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
+ +A G+ LH + ++ DL+P NILL + ++DFGL++ A E+
Sbjct: 132 VKFYLAELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEK--- 185
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
Y F Y APE + + D +SYGV++ EM++
Sbjct: 186 --------------KAYSFCGTVE------YMAPEVVNRQGHSHSADWWSYGVLMFEMLT 225
Query: 591 GKLPM 595
G LP
Sbjct: 226 GSLPF 230
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 9 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ- 126
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 127 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 176
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 177 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 217
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 218 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 258
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 259 IDADSRPKFREL 270
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 2 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 119
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 120 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 169
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 170 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 210
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 211 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 251
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 252 IDADSRPKFREL 263
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYF 432
LG G+V+KV+ V R+L + + Q E + + + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+S E + +++ GSL + KAG I + L ++ V KG+ +L E +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLTYLRE--KHK 125
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++PSNIL+ E + DFG+ +G + S F
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGV-------------------SGQLIDSMANSFVGT 166
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
S Y +PE + + + DI+S G+ L+EM G+ P+ + EL ++ Q+
Sbjct: 167 RS------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYF 432
LG G+V+KV+ V R+L + + Q E + + + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+S E + +++ GSL + KAG I + L ++ V KG+ +L E +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLTYLRE--KHK 125
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++PSNIL+ E + DFG+ +G + S F
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGV-------------------SGQLIDSMANSFVGT 166
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
S Y +PE + + + DI+S G+ L+EM G+ P+ + EL ++ Q+
Sbjct: 167 RS------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 97/242 (40%), Gaps = 43/242 (17%)
Query: 368 LKASAFL--LGKSTIGIVYKVAL------NNEEAVAVRRLGNGGWQRFKE-FQTEAEAIG 418
L A F+ LG+ G VYK L +AVA++ L + +E F+ EA
Sbjct: 8 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 67
Query: 419 KIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-----HGKAGIIS-----YRPLSW 468
+++HPN+V L +I+ Y +G L + H G L
Sbjct: 68 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 127
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
D + ++ +A G+ +L S VH DL N+L+ + ISD GL R A+
Sbjct: 128 PDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD-- 182
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
+ L ++ + APEA K + DI+SYGV+L E+
Sbjct: 183 -------------------YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
Query: 589 IS 590
S
Sbjct: 224 FS 225
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 175
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 176 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 216
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 217 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 257
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 258 IDADSRPKFREL 269
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYF 432
LG G+V+KV+ V R+L + + Q E + + + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+S E + +++ GSL + KAG I + L ++ V KG+ +L E +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLTYLRE--KHK 125
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++PSNIL+ E + DFG+ +G + S F
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGV-------------------SGQLIDSMANSFVGT 166
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
S Y +PE + + + DI+S G+ L+EM G+ P+ + EL ++ Q+
Sbjct: 167 RS------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYF 432
LG G+V+KV+ V R+L + + Q E + + + P IV F
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+S E + +++ GSL + KAG I + L ++ V KG+ +L E +
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLTYLRE--KHK 152
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++PSNIL+ E + DFG+ +G + S F
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGV-------------------SGQLIDSMANSFVGT 193
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
S Y +PE + + + DI+S G+ L+EM G+ P+ + EL ++ Q+
Sbjct: 194 RS------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 246
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 36/240 (15%)
Query: 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQ---TEAEAIGKIRHPNIVSLR 429
+ +G + G K+ ++ + V + + G E Q +E + +++HPNIV R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--R 69
Query: 430 AYFWSVDEK----LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
Y +D ++ +Y G LA+ I G + L LR++ + +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 486 HEVSPKRY--VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
H S + +H DL+P+N+ L + DFGLAR+ + E+ + + GTP
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-----FAKEFVGTP-- 180
Query: 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
YY +PE +K DI+S G +L E+ + P EL
Sbjct: 181 ----------------YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---------DHDHTGF-----------L 186
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 40/253 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIG 418
D D E++ + LG G+V+KV+ V R+L + + Q E + +
Sbjct: 67 DDDFEKISE-----LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 121
Query: 419 KIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGV 478
+ P IV F+S E + +++ GSL + KAG I + L ++ V
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAV 175
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTT 538
KG+ +L E + +H D++PSNIL+ E + DFG+ +
Sbjct: 176 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV-------------------S 214
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQI 598
G + S F S Y +PE + + + DI+S G+ L+EM G+ P+
Sbjct: 215 GQLIDSMANSFVGTRS------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 268
Query: 599 GSMELNIVQWIQL 611
+ EL ++ Q+
Sbjct: 269 DAKELELMFGCQV 281
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 136/337 (40%), Gaps = 66/337 (19%)
Query: 361 DFDLEQLLKASAFLLGK----STIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
++D+++ L AF + + T G+ + + N + ++ R F++ + EA
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD--------FQKLEREARI 81
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
K++HPNIV L L++D + G L I++ S +D I+
Sbjct: 82 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE------DIVAREFYSEADASHCIQ 135
Query: 477 GVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETPEVHW 533
+ + IA+ H VH +L+P N+LL K ++DFGLA + +E W
Sbjct: 136 QILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-----W 187
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
GTP Y +PE K ++ DI++ GVIL ++ G
Sbjct: 188 -HGFAGTP------------------GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 228
Query: 594 PM-----------IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLK 642
P I+ G+ + +W + E + ++D L + K LK
Sbjct: 229 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALK 284
Query: 643 IALDCVHKSPDKRPSMRHVCDSLDRVNISTEQQFMKG 679
+ C + ++ S H D++D + ++ +KG
Sbjct: 285 VPWIC---NRERVASAIHRQDTVDCLKKFNARRKLKG 318
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 10 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 59
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L T + A PL S ++++G
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG---- 114
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 115 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 155
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 156 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
+E + E + ++ HPNI++L + + + +LI + + G L + K LS
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES------LS 113
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNME-PHIS--DFGLARLAD 523
+ IK + G+ +LH K+ H DL+P NI LL KN+ PHI DFGLA +
Sbjct: 114 EEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 171 DGVEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 206
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 207 ITYILLSGASPFL 219
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 14 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 63
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L T + A PL S ++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG---- 118
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 119 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 159
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 160 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 38/199 (19%)
Query: 401 NGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAG 459
N ++F +E E + + HPNI+ L F L+ ++ G L
Sbjct: 83 NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQ------ 136
Query: 460 IISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL-GKN--MEPHISDF 516
II+ D I+K + GI +LH+ + VH D++P NILL KN + I DF
Sbjct: 137 IINRHKFDECDAANIMKQILSGICYLHKHNI---VHRDIKPENILLENKNSLLNIKIVDF 193
Query: 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKW 576
GL+ S Y+ L +YY APE K +K +K
Sbjct: 194 GLSSFF---------------------SKDYK---LRDRLGTAYYIAPEVLK-KKYNEKC 228
Query: 577 DIYSYGVILLEMISGKLPM 595
D++S GVI+ ++ G P
Sbjct: 229 DVWSCGVIMYILLCGYPPF 247
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 34/224 (15%)
Query: 376 GKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVSLRAYFWS 434
G S + + + L+ + AV V R F F+ EA+ + HP IV++ A +
Sbjct: 24 GMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEA 83
Query: 435 VDEK----LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
++ +Y+ +L +H + P++ + +I + + F H+
Sbjct: 84 ETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQ--- 134
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
+H D++P+NI++ + DFG+AR IA+ V + GT
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGT---------- 182
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
+ Y +PE ++ + D+YS G +L E+++G+ P
Sbjct: 183 --------AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 46/286 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAV--AVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
LG G VYK A N E A + + + +++ E E + HP IV L +
Sbjct: 19 LGDGAFGKVYK-AKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + ++ ++ P G++ + + R L+ + + + + + FLH KR
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIM-----LELDRGLTEPQIQVVCRQMLEALNFLHS---KR 129
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+ N+L+ + ++DFG++ A+ + S GTP +P E
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAP-EVVMC 183
Query: 553 NSTTSRSY-YQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ Y Y+A DI+S G+ L+EM + P ++ M + L
Sbjct: 184 ETMKDTPYDYKA-------------DIWSLGITLIEMAQIEPPHHELNPMR------VLL 224
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+ P P L E LKIALD K+P+ RPS
Sbjct: 225 KIAKSDP------PTLLTPSKWSVEFRDFLKIALD---KNPETRPS 261
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 43/253 (16%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 18 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 135
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 136 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 185
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 186 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 226
Query: 592 KLPMIQIGSMELN 604
P I + E++
Sbjct: 227 SKPYDGIPASEIS 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 36/240 (15%)
Query: 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQ---TEAEAIGKIRHPNIVSLR 429
+ +G + G K+ ++ + V + + G E Q +E + +++HPNIV R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--R 69
Query: 430 AYFWSVDEK----LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
Y +D ++ +Y G LA+ I G + L LR++ + +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 486 HEVSPKRY--VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
H S + +H DL+P+N+ L + DFGLAR+ + + + ++ GTP
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-----HDTSFAKTFVGTP-- 180
Query: 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
YY +PE +K DI+S G +L E+ + P EL
Sbjct: 181 ----------------YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 129 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 178
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 179 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 219
Query: 592 KLPMIQIGSMELNIV 606
P I + E++ +
Sbjct: 220 SKPYDGIPASEISSI 234
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 43/253 (16%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 175
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 176 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 216
Query: 592 KLPMIQIGSMELN 604
P I + E++
Sbjct: 217 SKPYDGIPASEIS 229
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 35/231 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYF 432
LG G+V+KV+ V R+L + + Q E + + + P IV F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+S E + +++ GSL + KAG I + L ++ V KG+ +L E +
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLTYLRE--KHK 128
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++PSNIL+ E + DFG+ +G + EF
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGV-------------------SGQLIDEMANEFVGT 169
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
S Y +PE + + + DI+S G+ L+EM G+ P + EL
Sbjct: 170 RS------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFEL 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 375 LGKSTIGIVYKVALNNE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
+G+ + GIV + + + VAV+++ QR + E + +H N+V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
DE ++ +++ G+L I+++ ++ + V + ++ LH +
Sbjct: 92 VGDELWVVMEFLEGGALTD-------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 141
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H D++ +ILL + +SDFG A +++E P + GTP
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPR---RKXLVGTP------------ 184
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
Y+ APE + DI+S G++++EM+ G+ P
Sbjct: 185 ------YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ G + +E Q + K+ H NIV LR +F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 178
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 179 -----NVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + YI + T ++ ++ + LS + + +G+ ++H +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+PSN+LL + I DFGLAR+AD + TG L
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADP---------DHDHTGF-----------L 186
Query: 553 NSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
+ +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 36/240 (15%)
Query: 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQ---TEAEAIGKIRHPNIVSLR 429
+ +G + G K+ ++ + V + + G E Q +E + +++HPNIV R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--R 69
Query: 430 AYFWSVDEK----LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
Y +D ++ +Y G LA+ I G + L LR++ + +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 486 HEVSPKRY--VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
H S + +H DL+P+N+ L + DFGLAR+ + + + ++ GTP
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-----HDTSFAKAFVGTP-- 180
Query: 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
YY +PE +K DI+S G +L E+ + P EL
Sbjct: 181 ----------------YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 375 LGKSTIGIVYKVALNNE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
+G+ + GIV + + + VAV+++ QR + E + +H N+V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
DE ++ +++ G+L I+++ ++ + V + ++ LH +
Sbjct: 88 VGDELWVVMEFLEGGALTD-------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 137
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H D++ +ILL + +SDFG A +++E P + GTP
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPR---RKXLVGTP------------ 180
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
Y+ APE + DI+S G++++EM+ G+ P
Sbjct: 181 ------YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ G + +E Q + K+ H NIV LR +F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 178
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 179 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 46/286 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAV--AVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
LG G VYK A N E A + + + +++ E E + HP IV L +
Sbjct: 27 LGDGAFGKVYK-AKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + ++ ++ P G++ + + R L+ + + + + + FLH KR
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIM-----LELDRGLTEPQIQVVCRQMLEALNFLHS---KR 137
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H DL+ N+L+ + ++DFG++ A+ + S GTP +P E
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAP-EVVMC 191
Query: 553 NSTTSRSY-YQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611
+ Y Y+A DI+S G+ L+EM + P ++ M + L
Sbjct: 192 ETMKDTPYDYKA-------------DIWSLGITLIEMAQIEPPHHELNPMR------VLL 232
Query: 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+ P P L E LKIALD K+P+ RPS
Sbjct: 233 KIAKSDP------PTLLTPSKWSVEFRDFLKIALD---KNPETRPS 269
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 45/208 (21%)
Query: 392 EAVAVRRLGNG-------GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK--LLIY 442
E VAV+ L G GWQR E E + + H +IV + EK L+
Sbjct: 39 EMVAVKALKEGCGPQLRSGWQR------EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVM 92
Query: 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSN 502
+Y+P GSL + + + L + + +G+A+LH + Y+H L N
Sbjct: 93 EYVPLGSLRD-------YLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARN 142
Query: 503 ILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQ 562
+LL + I DFGLA+ PE H + S ++
Sbjct: 143 VLLDNDRLVKIGDFGLAK------AVPEGH--------------EYYRVREDGDSPVFWY 182
Query: 563 APEASKVRKPTQKWDIYSYGVILLEMIS 590
APE K K D++S+GV L E+++
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 45/208 (21%)
Query: 392 EAVAVRRLGNG-------GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK--LLIY 442
E VAV+ L G GWQR E E + + H +IV + EK L+
Sbjct: 38 EMVAVKALKEGCGPQLRSGWQR------EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVM 91
Query: 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSN 502
+Y+P GSL + + + L + + +G+A+LH + Y+H L N
Sbjct: 92 EYVPLGSLRD-------YLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARN 141
Query: 503 ILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQ 562
+LL + I DFGLA+ PE H + S ++
Sbjct: 142 VLLDNDRLVKIGDFGLAK------AVPEGH--------------EYYRVREDGDSPVFWY 181
Query: 563 APEASKVRKPTQKWDIYSYGVILLEMIS 590
APE K K D++S+GV L E+++
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ G + +E Q + K+ H NIV LR +F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 178
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 179 -----NVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 82
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 178
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 179 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 83
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 140
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 179
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 180 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 33 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYI---------RKIGSFDETCTRFY 137
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 191
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
NS + Y +PE + ++ D+++ G I+ ++++G LP +
Sbjct: 192 ---------------NSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG-LPPFR 235
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 236 AGNEYLIFQKIIKL 249
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 35/223 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYF 432
LG G+V+KV+ V R+L + + Q E + + + P IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+S E + +++ GSL + KAG I + L ++ V KG+ +L E +
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILG-----KVSIAVIKGLTYLRE--KHK 125
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++PSNIL+ E + DFG+ +G + S F
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGV-------------------SGQLIDSMANSFVGT 166
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
S Y +PE + + + DI+S G+ L+EM G+ P+
Sbjct: 167 RS------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 48/242 (19%)
Query: 361 DFDLEQLLKASAFLLGK----STIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
++D+++ L AF + + T G+ + + N + ++ R F++ + EA
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD--------FQKLEREARI 58
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
K++HPNIV L L++D + G L I++ S +D I+
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE------DIVAREFYSEADASHCIQ 112
Query: 477 GVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETPEVHW 533
+ + IA+ H VH +L+P N+LL K ++DFGLA + +E W
Sbjct: 113 QILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-----W 164
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
GTP Y +PE K ++ DI++ GVIL ++ G
Sbjct: 165 -HGFAGTP------------------GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 594 PM 595
P
Sbjct: 206 PF 207
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 82
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 178
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 179 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 82
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 178
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 179 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 375 LGKSTIGIVYKVALNNE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
+G+ + GIV + + + VAV+++ QR + E + +H N+V + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
DE ++ +++ G+L I+++ ++ + V + ++ LH +
Sbjct: 97 VGDELWVVMEFLEGGALTD-------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 146
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H D++ +ILL + +SDFG A +++E P + GTP
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPR---RKXLVGTP------------ 189
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
Y+ APE + DI+S G++++EM+ G+ P
Sbjct: 190 ------YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 34/224 (15%)
Query: 376 GKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVSL----RA 430
G S + + + L+ + AV V R F F+ EA+ + HP IV++ A
Sbjct: 24 GMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 83
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
+ ++ +Y+ +L +H + P++ + +I + + F H+
Sbjct: 84 ETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQ--- 134
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
+H D++P+NI++ + DFG+AR IA+ V + GT
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGT---------- 182
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
+ Y +PE ++ + D+YS G +L E+++G+ P
Sbjct: 183 --------AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 44/248 (17%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 94
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 151
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 190
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604
++ SR YY+APE T D++S G +L E++ G+ P+ S
Sbjct: 191 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 243
Query: 605 IVQWIQLI 612
+V+ I+++
Sbjct: 244 LVEIIKVL 251
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 86
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 143
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 182
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 183 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 45/248 (18%)
Query: 364 LEQLLKASAFLLGKSTIGIVY-KVALNNEEAVAVR----RLGNGGWQRFKEFQTEAEAIG 418
E + K ++ LLG+ V V+L N + AV+ + G+ + F+E +T + G
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 419 KIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGV 478
+ NI+ L +F L+++ + GS+ I + + + + R+++ V
Sbjct: 70 ---NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQ------KHFNEREASRVVRDV 120
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLG--KNMEP-HISDFGLARLADIAEETPEVHWEQ 535
A + FLH K H DL+P NIL + + P I DF L
Sbjct: 121 AAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLG---------------- 161
Query: 536 STTGTPLQSS--PYEFTALNSTTSRSYYQAPEASKVRKPT-----QKWDIYSYGVILLEM 588
+G L +S P L + + Y APE +V ++ D++S GV+L M
Sbjct: 162 --SGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIM 219
Query: 589 ISGKLPMI 596
+SG P +
Sbjct: 220 LSGYPPFV 227
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 48/242 (19%)
Query: 361 DFDLEQLLKASAFLLGK----STIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
++D+++ L AF + + T G+ + + N + ++ R F++ + EA
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD--------FQKLEREARI 58
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
K++HPNIV L L++D + G L I++ S +D I+
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE------DIVAREFYSEADASHCIQ 112
Query: 477 GVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETPEVHW 533
+ + IA+ H VH +L+P N+LL K ++DFGLA + +E W
Sbjct: 113 QILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-----W 164
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
GTP Y +PE K ++ DI++ GVIL ++ G
Sbjct: 165 -HGFAGTP------------------GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 594 PM 595
P
Sbjct: 206 PF 207
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 375 LGKSTIGIVYKVALNNE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
+G+ + GIV + + + VAV+++ QR + E + +H N+V + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
DE ++ +++ G+L I+++ ++ + V + ++ LH +
Sbjct: 99 VGDELWVVMEFLEGGALTD-------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 148
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H D++ +ILL + +SDFG A +++E P + GTP
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPR---RKXLVGTP------------ 191
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
Y+ APE + DI+S G++++EM+ G+ P
Sbjct: 192 ------YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 34/224 (15%)
Query: 376 GKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVSL----RA 430
G S + + + L+ + AV V R F F+ EA+ + HP IV++ A
Sbjct: 41 GMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 100
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
+ ++ +Y+ +L +H + P++ + +I + + F H+
Sbjct: 101 ETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQ--- 151
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
+H D++P+NI++ + DFG+AR IA+ V + GT
Sbjct: 152 NGIIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGT---------- 199
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
+ Y +PE ++ + D+YS G +L E+++G+ P
Sbjct: 200 --------AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA+ L + KE E
Sbjct: 42 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDE 101
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 102 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 159
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 160 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 209
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 210 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 250
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 251 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 291
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 292 IDADSRPKFREL 303
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 44/248 (17%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 90
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 147
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 186
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604
++ SR YY+APE T D++S G +L E++ G+ P+ S
Sbjct: 187 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 239
Query: 605 IVQWIQLI 612
+V+ I+++
Sbjct: 240 LVEIIKVL 247
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 101
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 158
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 197
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 198 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 82
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 139
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 178
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 179 -----NVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 48/242 (19%)
Query: 361 DFDLEQLLKASAFLLGK----STIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
++D+++ L AF + + T G+ + + N + ++ R F++ + EA
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD--------FQKLEREARI 57
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
K++HPNIV L L++D + G L I++ S +D I+
Sbjct: 58 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE------DIVAREFYSEADASHCIQ 111
Query: 477 GVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETPEVHW 533
+ + IA+ H VH +L+P N+LL K ++DFGLA + +E W
Sbjct: 112 QILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-----W 163
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
GTP Y +PE K ++ DI++ GVIL ++ G
Sbjct: 164 -HGFAGTP------------------GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 204
Query: 594 PM 595
P
Sbjct: 205 PF 206
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 5 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 64
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 65 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 122
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+A+G+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 123 -----IAEGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 172
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 173 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 213
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 214 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 254
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 255 IDADSRPKFREL 266
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 44/248 (17%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 116
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 173
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 212
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604
++ SR YY+APE T D++S G +L E++ G+ P+ S
Sbjct: 213 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 265
Query: 605 IVQWIQLI 612
+V+ I+++
Sbjct: 266 LVEIIKVL 273
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 32/195 (16%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+TE EA+ +RH +I L + ++ ++ +Y P G L IIS LS
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDY------IISQDRLSEE 108
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ + + + +A++H + Y H DL+P N+L + + + DFGL
Sbjct: 109 ETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLC---------- 155
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT-QKWDIYSYGVILLEM 588
P + Y L + Y APE + + + D++S G++L +
Sbjct: 156 ---------AKPKGNKDYH---LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVL 203
Query: 589 ISGKLPMIQIGSMEL 603
+ G LP M L
Sbjct: 204 MCGFLPFDDDNVMAL 218
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 375 LGKSTIGIVYKV-ALNNEEAVAVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY N+ +A++ L ++ + + E E +RHPNI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF L+ ++ P G L + R ++ + L A + + HE
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCHE--- 132
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFG 517
++ +H D++P N+L+G E I+DFG
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 121/281 (43%), Gaps = 48/281 (17%)
Query: 390 NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS--VDEKLLIYDYIPN 447
N+ V V ++ + ++ ++F E + HPN++ + S LI ++P
Sbjct: 34 NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93
Query: 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK 507
GSL +H + + S ++ +A+G+AFLH + P H L ++++ +
Sbjct: 94 GSLYNVLHEGTNFV----VDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSRSVMIDE 148
Query: 508 NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS 567
+M IS +AD+ SP A + + PE +
Sbjct: 149 DMTARIS------MADVKFSF---------------QSPGRMYAPAWVAPEALQKKPEDT 187
Query: 568 KVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFL 627
R D++S+ V+L E+++ ++P + +ME+ +++ LE +P + P +
Sbjct: 188 NRRSA----DMWSFAVLLWELVTREVPFADLSNMEIG----MKVALEGLRP---TIPPGI 236
Query: 628 AHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668
+ + K ++KI C+++ P KRP + L+++
Sbjct: 237 SPHVSK------LMKI---CMNEDPAKRPKFDMIVPILEKM 268
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 375 LGKSTIGIVYKV-ALNNEEAVAVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY N+ +A++ L ++ + + E E +RHPNI+ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF L+ ++ P G L + R ++ + L A + + HE
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCHE--- 133
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFG 517
++ +H D++P N+L+G E I+DFG
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFG A+L + E E H
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYH 177
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 178 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 218
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 219 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 259
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 260 IDADSRPKFREL 271
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 57/244 (23%)
Query: 363 DLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI--- 417
D+E K +G+ T G+VYK A N E VA++++ TE E +
Sbjct: 5 DMENFQKVEK--IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPST 52
Query: 418 --------GKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
++ HPNIV L + ++ L+++++ + L + A PL S
Sbjct: 53 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 111
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
++++G +AF H R +H DL+P N+L+ ++DFGLAR
Sbjct: 112 YLFQLLQG----LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR--------- 155
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEM 588
G P+++ +E L +Y+APE + + DI+S G I EM
Sbjct: 156 -------AFGVPVRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
Query: 589 ISGK 592
++ +
Sbjct: 202 VTRR 205
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 94
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 151
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 190
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 191 -----NVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 12 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 129
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFG A+L + E E H
Sbjct: 130 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYH 179
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 180 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 220
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 221 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 261
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 262 IDADSRPKFREL 273
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 375 LGKSTIGIVYKV-ALNNEEAVAVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY N+ +A++ L ++ + + E E +RHPNI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF L+ ++ P G L + R ++ + L A + + HE
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCHE--- 132
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFG 517
++ +H D++P N+L+G E I+DFG
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 33/192 (17%)
Query: 407 FKEFQTEAEAIGKIRHPNIVSL----RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIIS 462
+ F+ EA+ + HP IV++ A + ++ +Y+ +L +H +
Sbjct: 56 YLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---- 111
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522
P++ + +I + + F H+ +H D++P+NIL+ + DFG+AR
Sbjct: 112 --PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARA- 165
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYG 582
IA+ V + GT + Y +PE ++ + D+YS G
Sbjct: 166 -IADSGNSVXQTAAVIGT------------------AQYLSPEQARGDSVDARSDVYSLG 206
Query: 583 VILLEMISGKLP 594
+L E+++G+ P
Sbjct: 207 CVLYEVLTGEPP 218
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 34 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 89
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 90 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 138
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 192
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
NS + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 193 ---------------NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 236
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 237 AGNEYLIFQKIIKL 250
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 36/189 (19%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+ E + KI+HPNIV+L + S LI + G L I K G + R
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-GFYTER----- 116
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNIL---LGKNMEPHISDFGLARLADIAE 526
D R+I V + +LH++ VH DL+P N+L L ++ + ISDFGL+++ D
Sbjct: 117 DASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG- 172
Query: 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586
+ L++ Y APE + ++ D +S GVI
Sbjct: 173 -----------------------SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 587 EMISGKLPM 595
++ G P
Sbjct: 210 ILLCGYPPF 218
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 100/252 (39%), Gaps = 54/252 (21%)
Query: 360 VDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGK 419
+D D +LL+ L+G+ G VYK +L+ E VAV+ Q F + +
Sbjct: 10 LDLDNLKLLE----LIGRGRYGAVYKGSLD-ERPVAVKVFSFANRQNFIN-EKNIYRVPL 63
Query: 420 IRHPNIVSLRAYFWSVDEK---------LLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+ H NI A F DE+ LL+ +Y PNGSL +S W
Sbjct: 64 MEHDNI----ARFIVGDERVTADGRMEYLLVMEYYPNGSLXK-------YLSLHTSDWVS 112
Query: 471 RLRIIKGVAKGIAFLHEVSPK------RYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524
R+ V +G+A+LH P+ H DL N+L+ + ISDFGL+
Sbjct: 113 SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS----- 167
Query: 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPE----ASKVR---KPTQKWD 577
TG L E A S Y APE A +R ++ D
Sbjct: 168 ----------MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVD 217
Query: 578 IYSYGVILLEMI 589
+Y+ G+I E+
Sbjct: 218 MYALGLIYWEIF 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +L G VYK E VA++ L + KE E
Sbjct: 15 LLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 132
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 133 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 182
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 183 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 223
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 224 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 264
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 265 IDADSRPKFREL 276
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 95
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 152
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ Q G P
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--------------QLVRGEP---- 191
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
++ SR YY+APE T D++S G +L E++ G+
Sbjct: 192 -----NVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 44/248 (17%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 110
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 167
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ + P V + S
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICS--------- 213
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604
YY+APE T D++S G +L E++ G+ P+ S
Sbjct: 214 -------------RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 259
Query: 605 IVQWIQLI 612
+V+ I+++
Sbjct: 260 LVEIIKVL 267
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 30 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 85
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 86 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 134
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 188
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
NS + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 189 ---------------NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 232
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 233 AGNEYLIFQKIIKL 246
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRF-KEFQTEAEAIGKIRHPNIVSLRAYF 432
+G+ G+V N N+ VA++++ Q + + E + + + RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 433 W--SVDEKLLIYDYIPNGSLATAIHGK--AGIISYRPLSWSDRLRIIKGVAKGIAFLHEV 488
++++ +Y L T + G ++ + LS + + +G+ ++H
Sbjct: 111 RAPTIEQMKDVY-------LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 489 SPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYE 548
+ +H DL+PSN+LL + I DFGLAR+AD + TG
Sbjct: 164 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---------DHDHTG--------- 202
Query: 549 FTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGK 592
L + +Y+APE K T+ DI+S G IL EM+S +
Sbjct: 203 --FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 41/234 (17%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+ E + KI+HPNIV+L + S LI + G L I K G + R
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-GFYTER----- 116
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNIL---LGKNMEPHISDFGLARLADIAE 526
D R+I V + +LH++ VH DL+P N+L L ++ + ISDFGL+++ D
Sbjct: 117 DASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG- 172
Query: 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586
+ L++ Y APE + ++ D +S GVI
Sbjct: 173 -----------------------SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 587 EMISGKLPMIQIGSMELNIVQWIQLILEDRKP----MTDILDPFLAHDLDKEDE 636
++ G P +L Q ++ E P ++D F+ H ++K+ E
Sbjct: 210 ILLCGYPPFYDENDAKL-FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPE 262
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 44/248 (17%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 116
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 173
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ + P V + S
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICS--------- 219
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604
YY+APE T D++S G +L E++ G+ P+ S
Sbjct: 220 -------------RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 265
Query: 605 IVQWIQLI 612
+V+ I+++
Sbjct: 266 LVEIIKVL 273
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 374 LLGKSTIGIVYKVALNNEE------AVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVS 427
+LG+ G V + L E+ AV +L N + +EF +EA + HPN++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 428 LRAYFWSVDEK-----LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
L + + ++I ++ G L T + + + L+ + +A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
+L S + ++H DL N +L +M ++DFGL++ +++ +
Sbjct: 161 EYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK---------KIYSGDYYRQGRI 208
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
P ++ A+ S R Y T K D++++GV + E+ +
Sbjct: 209 AKMPVKWIAIESLADRVY------------TSKSDVWAFGVTMWEIAT 244
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 18 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 67
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 122
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 123 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 163
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 164 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFG A+L + E E H
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYH 175
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 176 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 216
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 217 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 257
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 258 IDADSRPKFREL 269
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 44/248 (17%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 120
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 177
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ + P V + S
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICS--------- 223
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604
YY+APE T D++S G +L E++ G+ P+ S
Sbjct: 224 -------------RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 269
Query: 605 IVQWIQLI 612
+V+ I+++
Sbjct: 270 LVEIIKVL 277
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 12 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 61
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 116
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 117 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 157
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 158 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 44/248 (17%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 118
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 175
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ + P V + S
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICS--------- 221
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604
YY+APE T D++S G +L E++ G+ P+ S
Sbjct: 222 -------------RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 267
Query: 605 IVQWIQLI 612
+V+ I+++
Sbjct: 268 LVEIIKVL 275
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 38/249 (15%)
Query: 365 EQLLKASAFLLGKSTIGIVYKVAL----NNEEAVAVRRLGN-GGWQRFKEFQTEAEAIGK 419
E+++ S ++GK G+VY N A++ L Q+ + F E +
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL---SWSDRLRIIK 476
+ HPN+++L +L + +P+ L HG P + D +
Sbjct: 79 LNHPNVLALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL 131
Query: 477 GVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQS 536
VA+G+ +L E +++VH DL N +L ++ ++DFGLAR DI + E + Q
Sbjct: 132 QVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLAR--DILDR--EYYSVQQ 184
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPM 595
L P ++TAL S + + T K D++S+GV+L E+++ G P
Sbjct: 185 HRHARL---PVKWTALESLQTYRF------------TTKSDVWSFGVLLWELLTRGAPPY 229
Query: 596 IQIGSMELN 604
I +L
Sbjct: 230 RHIDPFDLT 238
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 15 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 132
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFG A+L + E E H
Sbjct: 133 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYH 182
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 183 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 223
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 224 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 264
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 265 IDADSRPKFREL 276
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 44/248 (17%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 87
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 144
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ + P V + S
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICS--------- 190
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604
YY+APE T D++S G +L E++ G+ P+ S
Sbjct: 191 -------------RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 236
Query: 605 IVQWIQLI 612
+V+ I+++
Sbjct: 237 LVEIIKVL 244
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 34/223 (15%)
Query: 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSN 502
+Y NG+L IH + + R W R+ + + + ++++H + +H DL+P N
Sbjct: 95 EYCENGTLYDLIHSE-NLNQQRDEYW----RLFRQILEALSYIH---SQGIIHRDLKPMN 146
Query: 503 ILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQ 562
I + ++ I DFGLA+ VH Q+ P L S + Y
Sbjct: 147 IFIDESRNVKIGDFGLAK---------NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 563 APEA-SKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTD 621
A E +K D+YS G+I EMI P G +NI++ ++ + + P
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPF-STGMERVNILKKLRSVSIEFPP--- 250
Query: 622 ILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
F + + E +I+ +L + P+KRP R + +S
Sbjct: 251 ---DFDDNKMKVEKKIIRLL------IDHDPNKRPGARTLLNS 284
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 111
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 112 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 169 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 204
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 205 ITYILLSGASPFL 217
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 36/189 (19%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+ E + KI+HPNIV+L + S LI + G L I K G + R
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-GFYTER----- 116
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNIL---LGKNMEPHISDFGLARLADIAE 526
D R+I V + +LH++ VH DL+P N+L L ++ + ISDFGL+++ D
Sbjct: 117 DASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG- 172
Query: 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586
+ L++ Y APE + ++ D +S GVI
Sbjct: 173 -----------------------SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 587 EMISGKLPM 595
++ G P
Sbjct: 210 ILLCGYPPF 218
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +L G VYK E VA++ L + KE E
Sbjct: 8 LLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 175
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 176 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 216
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 217 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 257
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 258 IDADSRPKFREL 269
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 10 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 59
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 114
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 115 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 155
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 156 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 37/185 (20%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNI+ L +F L+ + G L I I + D
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI------IHRMKFNEVDAA 139
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEETP 529
IIK V G+ +LH+ VH DL+P N+LL K+ I DFGL+ + + ++
Sbjct: 140 VIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK 196
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E GT +YY APE + +K +K D++S GVIL ++
Sbjct: 197 E------RLGT------------------AYYIAPEVLR-KKYDEKCDVWSIGVILFILL 231
Query: 590 SGKLP 594
+G P
Sbjct: 232 AGYPP 236
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 14 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 63
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 118
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 119 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 159
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 160 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 111
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 112 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 169 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 204
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 205 ITYILLSGASPFL 217
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP + APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTPA------------------FVAPEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 14 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 63
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 118
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 119 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 159
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 160 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 13 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 62
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 117
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 118 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 158
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 159 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 44/248 (17%)
Query: 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
++G + G+VY+ L ++ E VA++++ +RFK E + + K+ H NIV LR +F
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFK--NRELQIMRKLDHCNIVRLRYFF 161
Query: 433 WSVDEKL------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
+S EK L+ DY+P A H + P+ + +L + + + + +A++H
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYV-KLYMYQ-LFRSLAYIH 218
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEP-HISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H D++P N+LL + + DFG A+ + P V + S
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICS--------- 264
Query: 546 PYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604
YY+APE T D++S G +L E++ G+ P+ S
Sbjct: 265 -------------RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 310
Query: 605 IVQWIQLI 612
+V+ I+++
Sbjct: 311 LVEIIKVL 318
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 10 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 59
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 114
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 115 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 155
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 156 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 10 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 59
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 114
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 115 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 155
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 156 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------ESLT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 12 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 61
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 116
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 117 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 157
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 158 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 124/312 (39%), Gaps = 64/312 (20%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +L G VYK E VA++ L + KE E
Sbjct: 15 LLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 132
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFGLA+L + E E H
Sbjct: 133 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYH 182
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 183 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 223
Query: 592 KLPMIQIGSMELNIVQWIQLILE--DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
P I + E I ILE +R P I + V I + C
Sbjct: 224 SKPYDGIPASE------ISSILEKGERLPQPPIC-------------TIDVYMIMVKCWM 264
Query: 650 KSPDKRPSMRHV 661
D RP R +
Sbjct: 265 IDADSRPKFREL 276
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 375 LGKSTIGIVYKVALNNE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
+G+ + GIV + + + VAV+++ QR + E + +H N+V + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
DE ++ +++ G+L I+++ ++ + V + ++ LH +
Sbjct: 142 VGDELWVVMEFLEGGALTD-------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 191
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H D++ +ILL + +SDFG A +++E P + GTP
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPR---RKXLVGTP------------ 234
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
Y+ APE + DI+S G++++EM+ G+ P
Sbjct: 235 ------YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 33/184 (17%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+ E + +RHP+I+ L + + +++ +Y G L I + + ++ +
Sbjct: 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYI------VEKKRMTEDE 109
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
R + + I + H + VH DL+P N+LL N+ I+DFGL+ + +
Sbjct: 110 GRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNI------MTD 160
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ +++ G+P ++P + Y PE D++S G++L M+
Sbjct: 161 GNFLKTSCGSPNYAAP-------EVINGKLYAGPEV----------DVWSCGIVLYVMLV 203
Query: 591 GKLP 594
G+LP
Sbjct: 204 GRLP 207
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 36/189 (19%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+ E + KI+HPNIV+L + S LI + G L I K G + R
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-GFYTER----- 116
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNIL---LGKNMEPHISDFGLARLADIAE 526
D R+I V + +LH++ VH DL+P N+L L ++ + ISDFGL+++ D
Sbjct: 117 DASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG- 172
Query: 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586
+ L++ Y APE + ++ D +S GVI
Sbjct: 173 -----------------------SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 587 EMISGKLPM 595
++ G P
Sbjct: 210 ILLCGYPPF 218
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 10 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 59
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 114
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 115 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 155
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 156 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 14 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 63
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 118
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 119 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 159
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 160 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 12 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 61
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 116
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 117 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 157
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 158 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 125/309 (40%), Gaps = 61/309 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKI-RHP 423
++++A+AF LGK + VAV+ L + KE +E + + + +H
Sbjct: 53 KVVEATAFGLGKEDAVL----------KVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGII----SYRPLSWSDRLRIIKGVA 479
NIV+L L+I +Y G L + KA RPL D L VA
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
+G+AFL + K +H D+ N+LL I DFGLAR DI ++ + +
Sbjct: 163 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI--VKGNAR 215
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL---PMI 596
P++ + APE+ T + D++SYG++L E+ S L P I
Sbjct: 216 LPVK-----------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 258
Query: 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP 656
+ S +V K + P A I S+++ C P RP
Sbjct: 259 LVNSKFYKLV----------KDGYQMAQPAFA-----PKNIYSIMQA---CWALEPTHRP 300
Query: 657 SMRHVCDSL 665
+ + +C L
Sbjct: 301 TFQQICSFL 309
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 13 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 62
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 117
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 118 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 158
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 159 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 15 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 64
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 119
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 120 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 160
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 161 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 62/282 (21%)
Query: 394 VAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK---LLIYDYIPNGSL 450
VAV+ + N + F EA + ++RH N+V L V+EK ++ +Y+ GSL
Sbjct: 38 VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSL 93
Query: 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME 510
+ + + L L+ V + + +L +VH DL N+L+ ++
Sbjct: 94 VDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNV 146
Query: 511 PHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR 570
+SDFGL + A ++T ++ P ++T APEA +
Sbjct: 147 AKVSDFGLTKEASSTQDTGKL--------------PVKWT------------APEALREA 180
Query: 571 KPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPF-LA 628
+ K D++S+G++L E+ S G++P +I P+ D++
Sbjct: 181 AFSTKSDVWSFGILLWEIYSFGRVPYPRI-------------------PLKDVVPRVEKG 221
Query: 629 HDLDKEDEI-VSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669
+ +D D +V ++ +C H RPS + + L+ +
Sbjct: 222 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 12 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 61
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 116
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 117 LAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR----------------AFGVP 157
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 158 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 18 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 67
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 122
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 123 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 163
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 164 VRTYTHEVVTL-------WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 13 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 62
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 117
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 118 LAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR----------------AFGVP 158
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 159 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYTHEVVTL-------WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 56/244 (22%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRL---GNGGWQRFKEFQTEAEAIGKIRH 422
QLL+ A + G V+K L NE VAV+ WQ + E ++ ++H
Sbjct: 27 QLLEVKA----RGRFGCVWKAQLLNE-YVAVKIFPIQDKQSWQN----EYEVYSLPGMKH 77
Query: 423 PNI---VSLRAYFWSVDEKL-LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGV 478
NI + SVD L LI + GSL+ + KA ++S W++ I + +
Sbjct: 78 ENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVS-----WNELCHIAETM 130
Query: 479 AKGIAFLHEVSPK-------RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
A+G+A+LHE P H D++ N+LL N+ I+DFGLA + + +
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT 190
Query: 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILL 586
H + T Y APE + R + D+Y+ G++L
Sbjct: 191 HGQVGT---------------------RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 229
Query: 587 EMIS 590
E+ S
Sbjct: 230 ELAS 233
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE + DI+S GVI+ EMI G
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + ++ HPNI+ L +F L+ + G L I I + S D
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI------ILRQKFSEVDAA 107
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETP 529
I+K V G +LH+ VH DL+P N+LL ++ I DFGL+ ++ +
Sbjct: 108 VIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 164
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E GT +YY APE + +K +K D++S GVIL ++
Sbjct: 165 E------RLGT------------------AYYIAPEVLR-KKYDEKCDVWSCGVILYILL 199
Query: 590 SGKLPM 595
G P
Sbjct: 200 CGYPPF 205
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 33 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 137
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 191
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 192 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 235
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 236 AGNEGLIFAKIIKL 249
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 33/192 (17%)
Query: 407 FKEFQTEAEAIGKIRHPNIVSL----RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIIS 462
+ F+ EA+ + HP IV++ A + ++ +Y+ +L +H +
Sbjct: 56 YLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---- 111
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522
P++ + +I + + F H+ +H D++P+NI++ + DFG+AR
Sbjct: 112 --PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA- 165
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYG 582
IA+ V + GT + Y +PE ++ + D+YS G
Sbjct: 166 -IADSGNSVTQTAAVIGT------------------AQYLSPEQARGDSVDARSDVYSLG 206
Query: 583 VILLEMISGKLP 594
+L E+++G+ P
Sbjct: 207 CVLYEVLTGEPP 218
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 12 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 61
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 116
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 117 LAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR----------------AFGVP 157
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 158 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 43/255 (16%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFG A+L + E E H
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYH 177
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 178 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 218
Query: 592 KLPMIQIGSMELNIV 606
P I + E++ +
Sbjct: 219 SKPYDGIPASEISSI 233
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE + DI+S GVI+ EMI G
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 14 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 63
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQG---- 118
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 119 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 159
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 160 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 8 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 113
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 152
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 153 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 597 Q 597
Q
Sbjct: 210 Q 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 31 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 86
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 87 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 135
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 189
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N+ + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 190 ---------------NAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 233
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 234 AGNEYLIFQKIIKL 247
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 14 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 63
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 118
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 119 LAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR----------------AFGVP 159
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 160 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 125/309 (40%), Gaps = 61/309 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKI-RHP 423
++++A+AF LGK + VAV+ L + KE +E + + + +H
Sbjct: 61 KVVEATAFGLGKEDAVL----------KVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGII----SYRPLSWSDRLRIIKGVA 479
NIV+L L+I +Y G L + KA RPL D L VA
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
+G+AFL + K +H D+ N+LL I DFGLAR DI ++ + +
Sbjct: 171 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI--VKGNAR 223
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL---PMI 596
P++ + APE+ T + D++SYG++L E+ S L P I
Sbjct: 224 LPVK-----------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 266
Query: 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP 656
+ S +V K + P A I S+++ C P RP
Sbjct: 267 LVNSKFYKLV----------KDGYQMAQPAFA-----PKNIYSIMQA---CWALEPTHRP 308
Query: 657 SMRHVCDSL 665
+ + +C L
Sbjct: 309 TFQQICSFL 317
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 33/192 (17%)
Query: 407 FKEFQTEAEAIGKIRHPNIVSL----RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIIS 462
+ F+ EA+ + HP IV++ A + ++ +Y+ +L +H +
Sbjct: 56 YLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---- 111
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522
P++ + +I + + F H+ +H D++P+NI++ + DFG+AR
Sbjct: 112 --PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA- 165
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYG 582
IA+ V + GT + Y +PE ++ + D+YS G
Sbjct: 166 -IADSGNSVTQTAAVIGT------------------AQYLSPEQARGDSVDARSDVYSLG 206
Query: 583 VILLEMISGKLP 594
+L E+++G+ P
Sbjct: 207 CVLYEVLTGEPP 218
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 13 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 62
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQG---- 117
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 118 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 158
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 159 VRTYXHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 8 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 113
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 152
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 153 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 597 Q 597
Q
Sbjct: 210 Q 210
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 6 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 57
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 111
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 112 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 150
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 151 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
Query: 597 Q 597
Q
Sbjct: 208 Q 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 127/313 (40%), Gaps = 65/313 (20%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKI-RHP 423
++++A+AF LGK + VAV+ L + KE +E + + + +H
Sbjct: 61 KVVEATAFGLGKEDAVL----------KVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRP--------LSWSDRLRII 475
NIV+L L+I +Y G L + K+ ++ P LS D L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 476 KGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
VA+G+AFL + K +H D+ N+LL I DFGLAR DI ++ + +
Sbjct: 171 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI--VK 223
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL-- 593
P++ + APE+ T + D++SYG++L E+ S L
Sbjct: 224 GNARLPVK-----------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
Query: 594 -PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSP 652
P I + S +V K + P A I S+++ C P
Sbjct: 267 YPGILVNSKFYKLV----------KDGYQMAQPAFA-----PKNIYSIMQA---CWALEP 308
Query: 653 DKRPSMRHVCDSL 665
RP+ + +C L
Sbjct: 309 THRPTFQQICSFL 321
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAAGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 33 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 137
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 191
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 192 ---------------NXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG-LPPFR 235
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 236 AGNEGLIFAKIIKL 249
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 38 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 93
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 94 LDHPFFVKL--YFCFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 142
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 143 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 196
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 197 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 240
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 241 AGNEYLIFQKIIKL 254
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 43/255 (16%)
Query: 364 LEQLLKASAF----LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRF-KEFQTE 413
L ++LK + F +LG G VYK E VA++ L + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 414 AEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH-GKAGIISYRPLSWSDRL 472
A + + +P++ L + +L I +P G L + K I S L+W +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+AKG+ +L + +R VH DL N+L+ I+DFG A+L + E E H
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYH 177
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591
E P ++ AL S R Y T + D++SYGV + E+++ G
Sbjct: 178 AEGGKV-------PIKWMALESILHRIY------------THQSDVWSYGVTVWELMTFG 218
Query: 592 KLPMIQIGSMELNIV 606
P I + E++ +
Sbjct: 219 SKPYDGIPASEISSI 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 110/245 (44%), Gaps = 40/245 (16%)
Query: 346 ENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ 405
++M+++E + D ++ L + G+ +G+ K +L VAV+ L
Sbjct: 22 QSMDKWEM----ERTDITMKHKLGGGQY--GEVYVGVWKKYSLT----VAVKTLKEDT-M 70
Query: 406 RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRP 465
+EF EA + +I+HPN+V L ++ +Y+P G+L + +
Sbjct: 71 EVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRE----CNREE 126
Query: 466 LSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525
++ L + ++ + +L + K ++H DL N L+G+N ++DFGL+RL
Sbjct: 127 VTAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHVVKVADFGLSRLM--- 180
Query: 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVIL 585
T + + + P++ + E A N+ + +S D++++GV+L
Sbjct: 181 --TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS-----------------DVWAFGVLL 221
Query: 586 LEMIS 590
E+ +
Sbjct: 222 WEIAT 226
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 37/193 (19%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
++ + E + +I+HPN+++L + + + +LI + + G L + K L+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES------LT 112
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNM-EPHIS--DFGLARLAD 523
+ +K + G+ +LH + + H DL+P NI LL +N+ +P I DFGLA D
Sbjct: 113 EEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E + GTP EF APE + D++S GV
Sbjct: 170 FGNEFKNIF------GTP------EFV------------APEIVNYEPLGLEADMWSIGV 205
Query: 584 ILLEMISGKLPMI 596
I ++SG P +
Sbjct: 206 ITYILLSGASPFL 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 8 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 113
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 152
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 153 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 597 Q 597
Q
Sbjct: 210 Q 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 8 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 113
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 152
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 153 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 597 Q 597
Q
Sbjct: 210 Q 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 8 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 113
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 152
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 153 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 597 Q 597
Q
Sbjct: 210 Q 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 375 LGKSTIGIVYKVALNNE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
+G+ + GIV + + + VAV+++ QR + E + +H N+V + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
DE ++ +++ G+L I+++ ++ + V + ++ LH +
Sbjct: 219 VGDELWVVMEFLEGGALTD-------IVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 268
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H D++ +ILL + +SDFG A +++E P + GTP
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPR---RKXLVGTP------------ 311
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
Y+ APE + DI+S G++++EM+ G+ P
Sbjct: 312 ------YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 90/233 (38%), Gaps = 66/233 (28%)
Query: 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSF 117
Q+ L I + ++G IP L + + ++ N SG+LP + + NL + GN
Sbjct: 102 QLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161
Query: 118 SGPVPMQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNL 177
SG +P G K ++ +++N TG +P FA NL
Sbjct: 162 SGAIPDSYGSFS-----------------------KLFTSMTISRNRLTGKIPPTFA-NL 197
Query: 178 TALQKLDLSFNNLSG----------------LIPNDIA----------NLSRLRLLAQRV 211
L +DLS N L G L N +A NL+ L L R+
Sbjct: 198 N-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRI 256
Query: 212 Y---------------VDLTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGPPL 249
Y +++++NNL G IPQ L +A+ N LCG PL
Sbjct: 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 22 ALLSFKQAIRNFPEGNNWNNSNEDPC--SWNGITC-REGQVFSLIIPNKKLTGF------ 72
ALL K+ + N ++W + D C +W G+ C + Q + + N L+G
Sbjct: 10 ALLQIKKDLGNPTTLSSWLPT-TDCCNRTWLGVLCDTDTQTYR--VNNLDLSGLNLPKPY 66
Query: 73 -IPADLGSLSAIGRVNLRN-NNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKY 130
IP+ L +L + + + NN G +P + + L L ++ + SG +P + ++K
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 131 LQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNL 190
L LD I L + + N +G +PD + + + +S N L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 191 SGLIPNDIANLSRLRLLAQRVYVDLTYNNLSG 222
+G IP ANL+ +VDL+ N L G
Sbjct: 187 TGKIPPTFANLN-------LAFVDLSRNMLEG 211
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 163 NSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSG 222
N+ GP+P A LT L L ++ N+SG IP+ ++ + L V +D +YN LSG
Sbjct: 87 NNLVGPIPPAIA-KLTQLHYLYITHTNVSGAIPDFLSQIKTL------VTLDFSYNALSG 139
Query: 223 LIPQN-AALLSLGPTAFIGN 241
+P + ++L +L F GN
Sbjct: 140 TLPPSISSLPNLVGITFDGN 159
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 168 PLPDGFATNLTALQKLDLS-FNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIP 225
P+P A NL L L + NNL G IP IA L++L Y+ +T+ N+SG IP
Sbjct: 67 PIPSSLA-NLPYLNFLYIGGINNLVGPIPPAIAKLTQLH------YLYITHTNVSGAIP 118
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 389 NNEEAVAVRRLG-NGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK--LLIYDYI 445
N E VAV+ L G + + E E + + H NIV + LI +++
Sbjct: 36 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL 505
P+GSL + I+ + +L+ + KG+ +L ++YVH DL N+L+
Sbjct: 96 PSGSLKEYLPKNKNKINLK-----QQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLV 147
Query: 506 GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPE 565
+ I DFGL + + +E T + S ++ APE
Sbjct: 148 ESEHQVKIGDFGLTKAIETDKEX--------------------XTVKDDRDSPVFWYAPE 187
Query: 566 ASKVRKPTQKWDIYSYGVILLEMIS 590
K D++S+GV L E+++
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 8 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 113
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 152
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 153 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 597 Q 597
Q
Sbjct: 210 Q 210
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA++++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALKKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
++F H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LSFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 33 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 137
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 191
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 192 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 235
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 236 AGNEYLIFQKIIKL 249
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 33/202 (16%)
Query: 392 EAVAVRRL-GNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK--LLIYDYIPNG 448
E VAV+ L + G Q ++ E + + + H +I+ + EK L+ +Y+P G
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN 508
SL + + + L + + +G+A+LH + Y+H +L N+LL +
Sbjct: 104 SLRD-------YLPRHSIGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDND 153
Query: 509 MEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK 568
I DFGLA+ PE H + S ++ APE K
Sbjct: 154 RLVKIGDFGLAK------AVPEGH--------------EYYRVREDGDSPVFWYAPECLK 193
Query: 569 VRKPTQKWDIYSYGVILLEMIS 590
K D++S+GV L E+++
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 33 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 137
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 191
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 192 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 235
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 236 AGNEYLIFQKIIKL 249
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 33/202 (16%)
Query: 392 EAVAVRRL-GNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK--LLIYDYIPNG 448
E VAV+ L + G Q ++ E + + + H +I+ + EK L+ +Y+P G
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN 508
SL + + + L + + +G+A+LH + Y+H +L N+LL +
Sbjct: 104 SLRD-------YLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDND 153
Query: 509 MEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK 568
I DFGLA+ PE H + S ++ APE K
Sbjct: 154 RLVKIGDFGLAK------AVPEGH--------------EYYRVREDGDSPVFWYAPECLK 193
Query: 569 VRKPTQKWDIYSYGVILLEMIS 590
K D++S+GV L E+++
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 34 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 89
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 90 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 138
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 192
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 193 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 236
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 237 AGNEYLIFQKIIKL 250
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + ++ HPNI+ L +F L+ + G L I I + S D
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI------ILRQKFSEVDAA 124
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEETP 529
I+K V G +LH+ VH DL+P N+LL ++ I DFGL+ ++ +
Sbjct: 125 VIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 181
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
E GT +YY APE + +K +K D++S GVIL ++
Sbjct: 182 E------RLGT------------------AYYIAPEVLR-KKYDEKCDVWSCGVILYILL 216
Query: 590 SGKLPM 595
G P
Sbjct: 217 CGYPPF 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 31 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 86
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 87 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 135
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 189
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 190 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 233
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 234 AGNEYLIFQKIIKL 247
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 31 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 86
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 87 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 135
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 189
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 190 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 233
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 234 AGNEYLIFQKIIKL 247
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 36 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 91
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 92 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 140
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 141 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 194
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 195 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 238
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 239 AGNEYLIFQKIIKL 252
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA+ ++ TE E + ++
Sbjct: 11 IGEGTYGVVYK-ARNKLTGEVVALXKI---------RLDTETEGVPSTAIREISLLKELN 60
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 115
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 116 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 156
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 157 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 55/232 (23%)
Query: 375 LGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAI-----------GKIR 421
+G+ T G+VYK A N E VA+ ++ TE E + ++
Sbjct: 10 IGEGTYGVVYK-ARNKLTGEVVALXKI---------RLDTETEGVPSTAIREISLLKELN 59
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HPNIV L + ++ L+++++ + L + A PL S ++++G
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG---- 114
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+AF H R +H DL+P N+L+ ++DFGLAR G P
Sbjct: 115 LAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----------------AFGVP 155
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGK 592
+++ +E L +Y+APE + + DI+S G I EM++ +
Sbjct: 156 VRTYTHEVVTL-------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 33 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 89 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 137
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 191
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 192 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 235
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 236 AGNEYLIFQKIIKL 249
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 130/321 (40%), Gaps = 60/321 (18%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKI-RHP 423
Q+++A AF + K+ VAV+ L G + +E + + I H
Sbjct: 44 QVIEADAFGIDKTA----------TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 424 NIVSLRAYFWSVDEKLL-IYDYIPNGSLATAIHGKAG-IISYRP-------LSWSDRLRI 474
N+V+L L+ I ++ G+L+T + K + Y+P L+ +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV--R 206
Query: 535 QSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
+ PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 207 KGDARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS---- 245
Query: 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK 654
+G+ V+ + K T + P + + + LDC H P +
Sbjct: 246 ---LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQ 294
Query: 655 RPSMRHVCDSLDRVNISTEQQ 675
RP+ + + L + + QQ
Sbjct: 295 RPTFSELVEHLGNLLQANAQQ 315
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 15 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 70
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 71 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 119
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 120 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 173
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 174 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 217
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 218 AGNEYLIFQKIIKL 231
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 375 LGKSTIGIVYKVALNNE--EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
LG+ + G VYK A++ E + VA++++ +E E + + P++V +
Sbjct: 37 LGEGSYGSVYK-AIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + ++ +Y GS++ I + + L+ + I++ KG+ +LH + R
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIR-----LRNKTLTEDEIATILQSTLKGLEYLHFM---R 145
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++ NILL ++DFG+A + T + GTP
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDXMAKRNXVIGTP----------- 189
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601
++ APE + DI+S G+ +EM GK P I M
Sbjct: 190 -------FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM 231
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 10 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 66 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 114
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 115 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 168
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 169 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 212
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 213 AGNEYLIFQKIIKL 226
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 30 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 85
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 86 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 134
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 188
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 189 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 232
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 233 AGNEYLIFQKIIKL 246
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 389 NNEEAVAVRRLG-NGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK--LLIYDYI 445
N E VAV+ L G + + E E + + H NIV + LI +++
Sbjct: 48 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL 505
P+GSL + I+ + +L+ + KG+ +L ++YVH DL N+L+
Sbjct: 108 PSGSLKEYLPKNKNKINLK-----QQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLV 159
Query: 506 GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPE 565
+ I DFGL + + +E T + S ++ APE
Sbjct: 160 ESEHQVKIGDFGLTKAIETDKEX--------------------XTVKDDRDSPVFWYAPE 199
Query: 566 ASKVRKPTQKWDIYSYGVILLEMIS 590
K D++S+GV L E+++
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 8 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 64 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 113 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 166
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 167 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 210
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 211 AGNEYLIFQKIIKL 224
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 11 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 67 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 115
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 116 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 169
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 170 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 213
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 214 AGNEYLIFQKIIKL 227
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST+ + ++A + E A+ + + + + T E + + +
Sbjct: 9 DFKFGKILGEGSF----STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 65 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 113
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 114 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 167
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 168 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 211
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 212 AGNEYLIFQKIIKL 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 62/245 (25%)
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
P +++L + + E +LI +Y G + + + +S +D +R+IK + +G+
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELA----EMVSENDVIRLIKQILEGV 144
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNM---EPHISDFGLARLADIAEETPEVHWEQSTTG 539
+LH+ VH DL+P NILL + I DFG++R A E E+ G
Sbjct: 145 YYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI------MG 195
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599
TP Y APE T D+++ G+I +++ P +
Sbjct: 196 TP------------------EYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237
Query: 600 SME--LNIVQWIQLILEDRKPMTDILDPFLAHDLD-KEDEIVSVLKIALDCVH----KSP 652
+ E LNI Q ++D E+ SV ++A D + K+P
Sbjct: 238 NQETYLNISQV---------------------NVDYSEETFSSVSQLATDFIQSLLVKNP 276
Query: 653 DKRPS 657
+KRP+
Sbjct: 277 EKRPT 281
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 398 RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK 457
R G R +E + E + ++ H N+++L + + + +LI + + G L + K
Sbjct: 51 RASRRGVSR-EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK 109
Query: 458 AGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNME-PHIS- 514
LS + IK + G+ +LH K+ H DL+P NI LL KN+ PHI
Sbjct: 110 ES------LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 515 -DFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT 573
DFGLA + E + GTP EF APE
Sbjct: 161 IDFGLAHEIEDGVEFKNIF------GTP------EFV------------APEIVNYEPLG 196
Query: 574 QKWDIYSYGVILLEMISGKLPMI 596
+ D++S GVI ++SG P +
Sbjct: 197 LEADMWSIGVITYILLSGASPFL 219
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 53/205 (25%)
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL-------------GKNM 509
Y P+S +++ +A G+A LH + + +H DL+P NIL+ +N+
Sbjct: 133 YNPIS------LLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENL 183
Query: 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAP---EA 566
ISDFGL + D + + LN+ + S ++AP E
Sbjct: 184 RILISDFGLCKKLDSGQXXFRXN-------------------LNNPSGTSGWRAPELLEE 224
Query: 567 SKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWI-----QLILEDRKPM- 619
S R+ T+ DI+S G + ++S GK P S E NI++ I L DR +
Sbjct: 225 STKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIA 284
Query: 620 --TDILDPFLAHDLDKEDEIVSVLK 642
TD++ + HD K + VL+
Sbjct: 285 EATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 398 RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK 457
R G R +E + E + ++ H N+++L + + + +LI + + G L + K
Sbjct: 51 RASRRGVSR-EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK 109
Query: 458 AGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNME-PHIS- 514
LS + IK + G+ +LH K+ H DL+P NI LL KN+ PHI
Sbjct: 110 ES------LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 515 -DFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT 573
DFGLA + E + GTP EF APE
Sbjct: 161 IDFGLAHEIEDGVEFKNIF------GTP------EFV------------APEIVNYEPLG 196
Query: 574 QKWDIYSYGVILLEMISGKLPMI 596
+ D++S GVI ++SG P +
Sbjct: 197 LEADMWSIGVITYILLSGASPFL 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 33/202 (16%)
Query: 392 EAVAVRRL-GNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK--LLIYDYIPNG 448
E VAV+ L + G Q ++ E + + + H +I+ + L+ +Y+P G
Sbjct: 61 EMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN 508
SL + + + L + + +G+A+LH + Y+H DL N+LL +
Sbjct: 121 SLRD-------YLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDND 170
Query: 509 MEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK 568
I DFGLA+ PE H + S ++ APE K
Sbjct: 171 RLVKIGDFGLAK------AVPEGH--------------EXYRVREDGDSPVFWYAPECLK 210
Query: 569 VRKPTQKWDIYSYGVILLEMIS 590
K D++S+GV L E+++
Sbjct: 211 EYKFYYASDVWSFGVTLYELLT 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 54/212 (25%)
Query: 394 VAVRRLGNGGWQRFKEFQTEAEA---------IGKIRHPNIVSLRAYFWSVDEKLLIYDY 444
VA+++L ++ FQ+E A + +RH N++ L F + DE L D
Sbjct: 53 VAIKKL-------YRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVF-TPDETL---DD 101
Query: 445 IPNGSLATAIHGK--AGIISYRPLSWSDRLR-IIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ L G ++ + L DR++ ++ + KG+ ++H +H DL+P
Sbjct: 102 FTDFYLVMPFMGTDLGKLMKHEKLG-EDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPG 157
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+ + ++ E I DFGLAR AD + + +Y
Sbjct: 158 NLAVNEDCELKILDFGLARQAD--------------------------SEMXGXVVTRWY 191
Query: 562 QAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+APE + TQ DI+S G I+ EMI+GK
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 8 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN 59
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 113
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 152
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 153 --TVFRYNNRE-RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 597 Q 597
Q
Sbjct: 210 Q 210
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 98/241 (40%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKE-FQTEAEAI 417
D+DL Q L G+ G V ++A+N EEAVAV+ + E + E
Sbjct: 8 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 418 GKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ H N+V + + + L +Y G L I G+ D R
Sbjct: 60 AMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 113
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 152
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 153 --TVFRYNNRE-RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 597 Q 597
Q
Sbjct: 210 Q 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFKEFQTEAEAIG 418
D+DL Q L G+ G V ++A+N EEAVAV+ + E + I
Sbjct: 7 DWDLVQTL-------GEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN 58
Query: 419 K-IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
K + H N+V + + + L +Y G L I G+ D R
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQ 112
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ G+ +LH + H D++P N+LL + ISDFGLA
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------------------ 151
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMI 596
T + + E LN Y APE K R+ + D++S G++L M++G+LP
Sbjct: 152 --TVFRYNNRE-RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 597 Q 597
Q
Sbjct: 209 Q 209
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 39/236 (16%)
Query: 374 LLGKSTIGIVYKVALNNEEAV-AVRRLGNGGWQRFKE---FQTEAEAIGK-IRHPNIVSL 428
++GK + G V EE AV+ L + KE +E + K ++HP +V L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEV 488
F + D+ + DYI G L + + + R ++ +A + +LH +
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAE------IASALGYLHSL 158
Query: 489 SPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST-TGTPLQSSPY 547
+ V+ DL+P NILL ++DFGL + E E + ST GTP
Sbjct: 159 N---IVYRDLKPENILLDSQGHIVLTDFGLCK------ENIEHNSTTSTFCGTP------ 203
Query: 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
Y APE + + D + G +L EM+ G P + E+
Sbjct: 204 ------------EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 35/187 (18%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH--GKAGIISYRPLSWSD 470
E + + K+ +VSL + + D L+ + G L I+ G+AG R + ++
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
+ G+ LH +R V+ DL+P NILL + ISD GLA
Sbjct: 294 E------ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLA----------- 333
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
VH + T + Y APE K + T D ++ G +L EMI+
Sbjct: 334 VHVPEGQT-------------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 591 GKLPMIQ 597
G+ P Q
Sbjct: 381 GQSPFQQ 387
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 53/205 (25%)
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL-------------GKNM 509
Y P+S +++ +A G+A LH + + +H DL+P NIL+ +N+
Sbjct: 133 YNPIS------LLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENL 183
Query: 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAP---EA 566
ISDFGL + D + + LN+ + S ++AP E
Sbjct: 184 RILISDFGLCKKLDSGQXXFRXN-------------------LNNPSGTSGWRAPELLEE 224
Query: 567 SKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWI-----QLILEDRKPM- 619
S R+ T+ DI+S G + ++S GK P S E NI++ I L DR +
Sbjct: 225 STKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIA 284
Query: 620 --TDILDPFLAHDLDKEDEIVSVLK 642
TD++ + HD K + VL+
Sbjct: 285 EATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 398 RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK 457
R G R +E + E + ++ H N+++L + + + +LI + + G L + K
Sbjct: 51 RASRRGVSR-EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK 109
Query: 458 AGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNME-PHIS- 514
LS + IK + G+ +LH K+ H DL+P NI LL KN+ PHI
Sbjct: 110 ES------LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 515 -DFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT 573
DFGLA + E + GTP EF APE
Sbjct: 161 IDFGLAHEIEDGVEFKNIF------GTP------EFV------------APEIVNYEPLG 196
Query: 574 QKWDIYSYGVILLEMISGKLPMI 596
+ D++S GVI ++SG P +
Sbjct: 197 LEADMWSIGVITYILLSGASPFL 219
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 32/182 (17%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNIV L + LI +Y G + + +++ + +
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL------VAHGRMKEKEAR 114
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ + + + H+ KR VH DL+ N+LL +M I+DFG + + +
Sbjct: 115 SKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---- 167
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
+ G+P ++P F Y PE D++S GVIL ++SG
Sbjct: 168 --DTFCGSPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGS 208
Query: 593 LP 594
LP
Sbjct: 209 LP 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 44/252 (17%)
Query: 374 LLGKSTIGIVYKVALNNEEA-----VAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSL 428
+LG G V+K EE +A + + G + +E + E + ++ H N++ L
Sbjct: 96 ILGGGRFGQVHKC----EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEV 488
F S ++ +L+ +Y+ G L I I L+ D + +K + +GI +H++
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRI-----IDESYNLTELDTILFMKQICEGIRHMHQM 206
Query: 489 SPKRYVHGDLRPSNILLGKNMEPHIS--DFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
+H DL+P NIL I DFGLAR + P
Sbjct: 207 ---YILHLDLKPENILCVNRDAKQIKIIDFGLAR----------------------RYKP 241
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME-LNI 605
E +N T + APE + D++S GVI ++SG P + E LN
Sbjct: 242 REKLKVNFGTPE--FLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNN 299
Query: 606 VQWIQLILEDRK 617
+ + LED +
Sbjct: 300 ILACRWDLEDEE 311
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 398 RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK 457
R G R +E + E + ++ H N+++L + + + +LI + + G L + K
Sbjct: 51 RASRRGVSR-EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK 109
Query: 458 AGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNME-PHIS- 514
LS + IK + G+ +LH K+ H DL+P NI LL KN+ PHI
Sbjct: 110 ES------LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 515 -DFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT 573
DFGLA + E + GTP EF APE
Sbjct: 161 IDFGLAHEIEDGVEFKNIF------GTP------EFV------------APEIVNYEPLG 196
Query: 574 QKWDIYSYGVILLEMISGKLPMI 596
+ D++S GVI ++SG P +
Sbjct: 197 LEADMWSIGVITYILLSGASPFL 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE + DI+S G I+ EMI G
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 398 RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK 457
R G R +E + E + ++ H N+++L + + + +LI + + G L + K
Sbjct: 51 RASRRGVSR-EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK 109
Query: 458 AGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI-LLGKNME-PHIS- 514
LS + IK + G+ +LH K+ H DL+P NI LL KN+ PHI
Sbjct: 110 ES------LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 515 -DFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT 573
DFGLA + E + GTP EF APE
Sbjct: 161 IDFGLAHEIEDGVEFKNIF------GTP------EFV------------APEIVNYEPLG 196
Query: 574 QKWDIYSYGVILLEMISGKLPMI 596
+ D++S GVI ++SG P +
Sbjct: 197 LEADMWSIGVITYILLSGASPFL 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 179
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE + DI+S G I+ EMI G
Sbjct: 180 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 32/183 (17%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNIV L + LI +Y G + + +++ + +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL------VAHGRMKEKEAR 117
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ + + + H+ KR VH DL+ N+LL +M I+DFG + + +
Sbjct: 118 SKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---- 170
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
+ G P ++P F Y PE D++S GVIL ++SG
Sbjct: 171 --DAFCGAPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGS 211
Query: 593 LPM 595
LP
Sbjct: 212 LPF 214
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 35/187 (18%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIH--GKAGIISYRPLSWSD 470
E + + K+ +VSL + + D L+ + G L I+ G+AG R + ++
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
+ G+ LH +R V+ DL+P NILL + ISD GLA
Sbjct: 294 E------ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLA----------- 333
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
VH + T + Y APE K + T D ++ G +L EMI+
Sbjct: 334 VHVPEGQT-------------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 591 GKLPMIQ 597
G+ P Q
Sbjct: 381 GQSPFQQ 387
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE + DI+S G I+ EMI G
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + +S L + ++ + +L + K +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 130
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL TG FTA
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRL---------------MTGDT-------FTAHA 168
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE + DI+S G I+ EMI G
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE + DI+S G I+ EMI G
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE + DI+S G I+ EMI G
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE + DI+S G I+ EMI G
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 40/254 (15%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT-EAEAIGK 419
DF ++L +F ST + ++A + E A+ + + + + T E + + +
Sbjct: 31 DFKFGKILGEGSF----STTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 86
Query: 420 IRHPNIVSLRAYFWSVDEKLLIY--DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+ HP V L YF D++ L + Y NG L I R + D
Sbjct: 87 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI---------RKIGSFDETCTRFY 135
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
A+ ++ L + K +H DL+P NILL ++M I+DFG A++ +PE ++
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARA- 189
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
N + Y +PE + + D+++ G I+ ++++G LP +
Sbjct: 190 ---------------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFR 233
Query: 598 IGSMELNIVQWIQL 611
G+ L + I+L
Sbjct: 234 AGNEYLIFQKIIKL 247
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN--GGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+GK + G V+K N + V ++ + ++ Q E + + P + +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ +I +Y+ GS ++ PL + I++ + KG+ +LH ++
Sbjct: 95 LKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIATILREILKGLDYLHS---EK 144
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLA-RLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+H D++ +N+LL ++ E ++DFG+A +L D + + GTP
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK------RNTFVGTP---------- 188
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
++ APE K K DI+S G+ +E+ G+ P ++ M++
Sbjct: 189 --------FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 232
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 406 RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRP 465
++ +F+ E + I I++ ++ + DE +IY+Y+ N S+ + + +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK--FDEYFFVLDKN 143
Query: 466 LSWSDRLRIIKGVAKGI--AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523
+ +++IK + K + +F + + K H D++PSNIL+ KN +SDFG
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG------ 197
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E ++ G+ YEF ++ S Y K DI+S G+
Sbjct: 198 ----ESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGA----------KVDIWSLGI 240
Query: 584 ILLEMISGKLPM-IQIGSMEL 603
L M +P ++I +EL
Sbjct: 241 CLYVMFYNVVPFSLKISLVEL 261
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 57/209 (27%)
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL-------------GKNM 509
Y P+S +++ +A G+A LH + + +H DL+P NIL+ +N+
Sbjct: 115 YNPIS------LLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENL 165
Query: 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPE---- 565
ISDFGL + D + + T LN+ + S ++APE
Sbjct: 166 RILISDFGLCKKLDSGQSSFR-------------------TNLNNPSGTSGWRAPELLEE 206
Query: 566 ---ASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWI-----QLILEDR 616
R+ T+ DI+S G + ++S GK P S E NI++ I L DR
Sbjct: 207 SNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDR 266
Query: 617 KPM---TDILDPFLAHDLDKEDEIVSVLK 642
+ TD++ + HD K + VL+
Sbjct: 267 SLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 126/313 (40%), Gaps = 65/313 (20%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKI-RHP 423
++++A+AF LGK + VAV+ L + KE +E + + + +H
Sbjct: 61 KVVEATAFGLGKEDAVL----------KVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL--------SWSDRLRII 475
NIV+L L+I +Y G L + K+ ++ P S D L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 476 KGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
VA+G+AFL + K +H D+ N+LL I DFGLAR DI ++ + +
Sbjct: 171 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI--VK 223
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL-- 593
P++ + APE+ T + D++SYG++L E+ S L
Sbjct: 224 GNARLPVK-----------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
Query: 594 -PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSP 652
P I + S +V K + P A I S+++ C P
Sbjct: 267 YPGILVNSKFYKLV----------KDGYQMAQPAFA-----PKNIYSIMQA---CWALEP 308
Query: 653 DKRPSMRHVCDSL 665
RP+ + +C L
Sbjct: 309 THRPTFQQICSFL 321
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 110/250 (44%), Gaps = 40/250 (16%)
Query: 341 LDTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLG 400
+D S N +++E + D ++ L + G+ G+ K +L VAV+ L
Sbjct: 3 MDPSSPNYDKWEM----ERTDITMKHKLGGGQY--GEVYEGVWKKYSLT----VAVKTLK 52
Query: 401 NGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGI 460
+EF EA + +I+HPN+V L +I +++ G+L +
Sbjct: 53 EDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---- 107
Query: 461 ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520
+ + +S L + ++ + +L + K ++H DL N L+G+N ++DFGL+R
Sbjct: 108 CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYS 580
L T + + + P++ + APE+ K + K D+++
Sbjct: 165 LM-----TGDTYTAHAGAKFPIK-----------------WTAPESLAYNKFSIKSDVWA 202
Query: 581 YGVILLEMIS 590
+GV+L E+ +
Sbjct: 203 FGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + +S L + ++ + +L + K +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL T + + + P++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 177
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 178 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + +S L + ++ + +L + K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL T + + + P++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 177
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 178 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + +S L + ++ + +L + K +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 130
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL + +T H + P++
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAH---AGAKFPIK---------- 175
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 176 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 216
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 217 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 179
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 180 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 179
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 180 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 177
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 178 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLL--IYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
E + K+ HPN+V L +E L +++ + G + + + +PLS
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-------VPTLKPLSEDQ 138
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
+ + KGI +LH ++ +H D++PSN+L+G++ I+DFG++ E
Sbjct: 139 ARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSN-----EFKGS 190
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEA-SKVRK--PTQKWDIYSYGVILLE 587
+T GTP + APE+ S+ RK + D+++ GV L
Sbjct: 191 DALLSNTVGTPA------------------FMAPESLSETRKIFSGKALDVWAMGVTLYC 232
Query: 588 MISGKLPMIQIGSMELNI-VQWIQLILEDRKPMTDILDPFLAHDLDKEDE 636
+ G+ P + M L+ ++ L D+ + + L + LDK E
Sbjct: 233 FVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPE 282
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 40/252 (15%)
Query: 339 NNLDTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRR 398
++D S N +++E + D ++ L + G+ G+ K +L VAV+
Sbjct: 1 TSMDPSSPNYDKWEM----ERTDITMKHKLGGGQY--GEVYEGVWKKYSLT----VAVKT 50
Query: 399 LGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKA 458
L +EF EA + +I+HPN+V L +I +++ G+L +
Sbjct: 51 LKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-- 107
Query: 459 GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518
+ + ++ L + ++ + +L + K ++H DL N L+G+N ++DFGL
Sbjct: 108 --CNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDI 578
+RL T + + + P++ + APE+ K + K D+
Sbjct: 163 SRLM-----TGDTYTAHAGAKFPIK-----------------WTAPESLAYNKFSIKSDV 200
Query: 579 YSYGVILLEMIS 590
+++GV+L E+ +
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 50/264 (18%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI-HGKAG--IISYRPLSWS 469
E + + ++ HPN++ A F +E ++ + G L+ I H K +I R + W
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-W- 139
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
K + + L + +R +H D++P+N+ + + D GL R + +T
Sbjct: 140 ------KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTT 191
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
H S GTP YY +PE K DI+S G +L EM
Sbjct: 192 AAH---SLVGTP------------------YYMSPERIHENGYNFKSDIWSLGCLLYEMA 230
Query: 590 SGKLPMIQIGSMELNIVQWIQLILE-DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648
+ + P ++N+ + I + D P+ H ++ ++V++ C+
Sbjct: 231 ALQSPFY---GDKMNLYSLCKKIEQCDYPPLPS------DHYSEELRQLVNM------CI 275
Query: 649 HKSPDKRPSMRHVCDSLDRVNIST 672
+ P+KRP + +V D R++ T
Sbjct: 276 NPDPEKRPDVTYVYDVAKRMHACT 299
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 40/252 (15%)
Query: 339 NNLDTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRR 398
++D S N +++E + D ++ L + G+ G+ K +L VAV+
Sbjct: 1 TSMDPSSPNYDKWEM----ERTDITMKHKLGGGQY--GEVYEGVWKKYSLT----VAVKT 50
Query: 399 LGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKA 458
L +EF EA + +I+HPN+V L +I +++ G+L +
Sbjct: 51 LKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-- 107
Query: 459 GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518
+ + ++ L + ++ + +L + K ++H DL N L+G+N ++DFGL
Sbjct: 108 --CNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDI 578
+RL T + + + P++ + APE+ K + K D+
Sbjct: 163 SRLM-----TGDTYTAHAGAKFPIK-----------------WTAPESLAYNKFSIKSDV 200
Query: 579 YSYGVILLEMIS 590
+++GV+L E+ +
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 172
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 173 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 19/131 (14%)
Query: 464 RPLSWSDR-----LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518
R S DR L I +A+ + FLH K +H DL+PSNI + + DFGL
Sbjct: 154 RRCSLEDREHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGL 210
Query: 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDI 578
D E E+ T TP+ + + Y +PE + K DI
Sbjct: 211 VTAMDQDE-------EEQTVLTPMPA----YATHXGQVGTKLYMSPEQIHGNNYSHKVDI 259
Query: 579 YSYGVILLEMI 589
+S G+IL E++
Sbjct: 260 FSLGLILFELL 270
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 172
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 173 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 216
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 217 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 171
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 172 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 34/223 (15%)
Query: 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSN 502
+Y N +L IH + + R W R+ + + + ++++H + +H DL+P N
Sbjct: 95 EYCENRTLYDLIHSE-NLNQQRDEYW----RLFRQILEALSYIH---SQGIIHRDLKPMN 146
Query: 503 ILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQ 562
I + ++ I DFGLA+ VH Q+ P L S + Y
Sbjct: 147 IFIDESRNVKIGDFGLAK---------NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 563 APEA-SKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTD 621
A E +K D+YS G+I EMI P G +NI++ ++ + + P
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPF-STGMERVNILKKLRSVSIEFPP--- 250
Query: 622 ILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
F + + E +I+ +L + P+KRP R + +S
Sbjct: 251 ---DFDDNKMKVEKKIIRLL------IDHDPNKRPGARTLLNS 284
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + +S L + ++ + +L + K +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL T + + + P++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 177
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 178 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + +S L + ++ + +L + K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL T + + + P++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 177
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 178 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGT 171
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 172 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + +S L + ++ + +L + K +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 130
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL + +T H + P++
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAH---AGAKFPIK---------- 175
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 176 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + DI+S G I+ EM+ K+
Sbjct: 179 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434
LG+ IVY+ + ++ + K +TE + ++ HPNI+ L+ F +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDK-KIVRTEIGVLLRLSHPNIIKLKEIFET 119
Query: 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYV 494
E L+ + + G L I K G S R D +K + + +A+LHE V
Sbjct: 120 PTEISLVLELVTGGELFDRIVEK-GYYSER-----DAADAVKQILEAVAYLHE---NGIV 170
Query: 495 HGDLRPSNILLGK---NMEPHISDFGLARLAD 523
H DL+P N+L + I+DFGL+++ +
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 126/322 (39%), Gaps = 74/322 (22%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKI-RHP 423
++++A+AF LGK + VAV+ L + KE +E + + + +H
Sbjct: 46 KVVEATAFGLGKEDAVL----------KVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGII-----------------SYRPL 466
NIV+L L+I +Y G L + KA + RPL
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 467 SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526
D L VA+G+AFL + K +H D+ N+LL I DFGLAR DI
Sbjct: 156 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMN 210
Query: 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586
++ + + P++ + APE+ T + D++SYG++L
Sbjct: 211 DSNYI--VKGNARLPVK-----------------WMAPESIFDCVYTVQSDVWSYGILLW 251
Query: 587 EMISGKL---PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKI 643
E+ S L P I + S +V K + P A I S+++
Sbjct: 252 EIFSLGLNPYPGILVNSKFYKLV----------KDGYQMAQPAFA-----PKNIYSIMQA 296
Query: 644 ALDCVHKSPDKRPSMRHVCDSL 665
C P RP+ + +C L
Sbjct: 297 ---CWALEPTHRPTFQQICSFL 315
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN--GGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+GK + G V+K N + V ++ + ++ Q E + + P + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ +I +Y+ GS ++ PL + I++ + KG+ +LH ++
Sbjct: 75 LKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIATILREILKGLDYLHS---EK 124
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLA-RLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+H D++ +N+LL ++ E ++DFG+A +L D + + GTP
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK------RNTFVGTP---------- 168
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
++ APE K K DI+S G+ +E+ G+ P ++ M++
Sbjct: 169 --------FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 212
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467
+E EA+ + ++ +P IV L + +L+ + G L + GK I P+S
Sbjct: 55 EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI---PVS 110
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527
+ ++ V+ G+ +L E K +VH DL N+LL ISDFGL++
Sbjct: 111 --NVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSK------- 158
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
L + +TA ++ + APE RK + + D++SYGV + E
Sbjct: 159 -------------ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 205
Query: 588 MIS-GKLPMIQIGSMEL 603
+S G+ P ++ E+
Sbjct: 206 ALSYGQKPYKKMKGPEV 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 109/247 (44%), Gaps = 40/247 (16%)
Query: 344 MSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGG 403
MS N +++E + D ++ L + G+ G+ K +L VAV+ L
Sbjct: 3 MSPNYDKWEM----ERTDITMKHKLGGGQY--GEVYEGVWKKYSLT----VAVKTLKEDT 52
Query: 404 WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISY 463
+EF EA + +I+HPN+V L +I +++ G+L + +
Sbjct: 53 -MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNR 107
Query: 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523
+ ++ L + ++ + +L + K ++H DL N L+G+N ++DFGL+RL
Sbjct: 108 QEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM- 163
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
T + + + P++ + APE+ K + K D++++GV
Sbjct: 164 ----TGDTYTAHAGAKFPIK-----------------WTAPESLAYNKFSIKSDVWAFGV 202
Query: 584 ILLEMIS 590
+L E+ +
Sbjct: 203 LLWEIAT 209
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 127/310 (40%), Gaps = 60/310 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKI-RHP 423
Q+++A AF + K+ VAV+ L G + +E + + I H
Sbjct: 42 QVIEADAFGIDKTA----------TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 424 NIVSLRAYFWSVDEKLL-IYDYIPNGSLATAIHGKAG-IISYRPLSWSDRLRIIK----- 476
N+V+L L+ I ++ G+L+T + K + Y+ L + D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL-YKDFLTLEHLICYS 150
Query: 477 -GVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV--RK 203
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 204 GDARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 241
Query: 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
+G+ V+ + K T + P + + + LDC H P +R
Sbjct: 242 --LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQR 291
Query: 656 PSMRHVCDSL 665
P+ + + L
Sbjct: 292 PTFSELVEHL 301
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 110/250 (44%), Gaps = 40/250 (16%)
Query: 341 LDTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLG 400
+D S N +++E + D ++ L + G+ G+ K +L VAV+ L
Sbjct: 3 MDPSSPNYDKWEM----ERTDITMKHKLGGGQY--GEVYEGVWKKYSLT----VAVKTLK 52
Query: 401 NGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGI 460
+EF EA + +I+HPN+V L +I +++ G+L +
Sbjct: 53 EDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---- 107
Query: 461 ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520
+ + ++ L + ++ + +L + K ++H DL N L+G+N ++DFGL+R
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYS 580
L T + + + P++ + APE+ K + K D+++
Sbjct: 165 LM-----TGDTYTAHAGAKFPIK-----------------WTAPESLAYNKFSIKSDVWA 202
Query: 581 YGVILLEMIS 590
+GV+L E+ +
Sbjct: 203 FGVLLWEIAT 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN--GGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+GK + G V+K N + V ++ + ++ Q E + + P + +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ +I +Y+ GS ++ PL + I++ + KG+ +LH ++
Sbjct: 90 LKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIATILREILKGLDYLHS---EK 139
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLA-RLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+H D++ +N+LL ++ E ++DFG+A +L D + GTP
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK------RNXFVGTP---------- 183
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
++ APE K K DI+S G+ +E+ G+ P ++ M++
Sbjct: 184 --------FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 41/250 (16%)
Query: 353 FVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQR 406
FVP + +V + LL+ LG+ + G+VY+ + E VAV+ + R
Sbjct: 7 FVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 407 FK-EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT---AIHGKAGIIS 462
+ EF EA + ++V L L++ + + +G L + ++ +A
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 463 YRPL-SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521
RP + + +++ +A G+A+L+ K++VH DL N ++ + I DFG+ R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 522 ADIAEETPEVHWEQSTTG-TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYS 580
DI E ++ + G P++ + APE+ K T D++S
Sbjct: 179 -DIYETA---YYRKGGKGLLPVR-----------------WMAPESLKDGVFTTSSDMWS 217
Query: 581 YGVILLEMIS 590
+GV+L E+ S
Sbjct: 218 FGVVLWEITS 227
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 95/248 (38%), Gaps = 42/248 (16%)
Query: 358 SQVDFDLEQLLKASAFLL----GKSTIGIV---YKVALNNEEAVAVRRLGNGGWQRFKEF 410
S VD E L S + L GK +V KV E A + + ++
Sbjct: 9 SGVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL 68
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+ EA ++HPNIV L LI+D + G L I++ S +D
Sbjct: 69 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE------DIVAREYYSEAD 122
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEE 527
I+ + + + H++ VH DL+P N+LL K ++DFGLA I E
Sbjct: 123 ASHCIQQILEAVLHCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLA----IEVE 175
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
+ W GTP Y +PE + + D+++ GVIL
Sbjct: 176 GEQQAW-FGFAGTP------------------GYLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 588 MISGKLPM 595
++ G P
Sbjct: 217 LLVGYPPF 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 172
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + D++S G I+ EM+ K+
Sbjct: 173 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 217
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 40/250 (16%)
Query: 341 LDTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLG 400
+D S N +++E + D ++ L + G+ G+ K +L VAV+ L
Sbjct: 3 MDPSSPNYDKWEM----ERTDITMKHKLGGGQY--GEVYEGVWKKYSLT----VAVKTLK 52
Query: 401 NGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGI 460
+EF EA + +I+HPN+V L +I +++ G+L +
Sbjct: 53 EDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---- 107
Query: 461 ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520
+ + ++ L + ++ + +L + K ++H DL N L+G+N ++DFGL+R
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYS 580
L + +T H + P++ + APE+ K + K D+++
Sbjct: 165 L--MTGDTXTAH---AGAKFPIK-----------------WTAPESLAYNKFSIKSDVWA 202
Query: 581 YGVILLEMIS 590
+GV+L E+ +
Sbjct: 203 FGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + ++ L + ++ + +L + K +
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 145
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL T + + + P++
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 190
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 191 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + ++ L + ++ + +L + K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 132
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL T + + + P++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 177
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 178 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 40/247 (16%)
Query: 344 MSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGG 403
MS N +++E + D ++ L + G+ G+ K +L VAV+ L
Sbjct: 2 MSPNYDKWEM----ERTDITMKHKLGGGQY--GEVYEGVWKKYSLT----VAVKTLKEDT 51
Query: 404 WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISY 463
+EF EA + +I+HPN+V L +I +++ G+L + +
Sbjct: 52 -MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNR 106
Query: 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523
+ ++ L + ++ + +L + K ++H DL N L+G+N ++DFGL+RL
Sbjct: 107 QEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 161
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
TG +TA + APE+ K + K D++++GV
Sbjct: 162 -------------MTGDT-------YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 201
Query: 584 ILLEMIS 590
+L E+ +
Sbjct: 202 LLWEIAT 208
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN--GGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+GK + G V+K N + V ++ + ++ Q E + + P + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ +I +Y+ GS ++ PL + I++ + KG+ +LH ++
Sbjct: 75 LKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIATILREILKGLDYLHS---EK 124
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLA-RLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+H D++ +N+LL ++ E ++DFG+A +L D + GTP
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK------RNXFVGTP---------- 168
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
++ APE K K DI+S G+ +E+ G+ P ++ M++
Sbjct: 169 --------FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + ++ L + ++ + +L + K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 132
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL T + + + P++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 177
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 178 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + ++ L + ++ + +L + K +
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 136
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL T + + + P++
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 181
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 182 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 40/247 (16%)
Query: 344 MSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGG 403
MS N +++E + D ++ L + G+ G+ K +L VAV+ L
Sbjct: 3 MSPNYDKWEM----ERTDITMKHKLGGGQY--GEVYEGVWKKYSLT----VAVKTLKEDT 52
Query: 404 WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISY 463
+EF EA + +I+HPN+V L +I +++ G+L + +
Sbjct: 53 -MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNR 107
Query: 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523
+ ++ L + ++ + +L + K ++H DL N L+G+N ++DFGL+RL
Sbjct: 108 QEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL-- 162
Query: 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
TG +TA + APE+ K + K D++++GV
Sbjct: 163 -------------MTGDT-------YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 202
Query: 584 ILLEMIS 590
+L E+ +
Sbjct: 203 LLWEIAT 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + ++ P+ S S +++ +A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N ++ ++ I DFG+ R DI E ++ + G P+
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 204
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 205 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 183
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+PY T YY+APE + D++S G I+ EM+ K+
Sbjct: 184 SFMMTPYVVT--------RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 41/232 (17%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE-----FQTEAEAIGKIRHPNIVSL 428
++G+ G V V L N + V ++ N W+ K F+ E + + I +L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNK-WEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG---VAKGIAFL 485
F + L+ DY G L T + + DRL +A+ + +
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLS-----------KFEDRLPEEMARFYLAEMVIAI 188
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFG--LARLADIAEETPEVHWEQSTTGTPLQ 543
V YVH D++P NIL+ N ++DFG L + D ++ GTP
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS------SVAVGTPDY 242
Query: 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
SP A+ R PE D +S GV + EM+ G+ P
Sbjct: 243 ISPEILQAMEGGKGR---YGPEC----------DWWSLGVCMYEMLYGETPF 281
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 128/315 (40%), Gaps = 67/315 (21%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKI-RHP 423
++++A+AF LGK + VAV+ L + KE +E + + + +H
Sbjct: 61 KVVEATAFGLGKEDAVL----------KVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKA--GI-ISYRP-------LSWSDRLR 473
NIV+L L+I +Y G L + K G+ SY P LS D L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
VA+G+AFL + K +H D+ N+LL I DFGLAR DI ++ +
Sbjct: 171 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI-- 223
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
+ P++ + APE+ T + D++SYG++L E+ S L
Sbjct: 224 VKGNARLPVK-----------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 266
Query: 594 ---PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHK 650
P I + S +V K + P A I S+++ C
Sbjct: 267 NPYPGILVNSKFYKLV----------KDGYQMAQPAFA-----PKNIYSIMQA---CWAL 308
Query: 651 SPDKRPSMRHVCDSL 665
P RP+ + +C L
Sbjct: 309 EPTHRPTFQQICSFL 323
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAV----AVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIV 426
LLGK T G KV L E+A A++ L TE + RHP +
Sbjct: 15 LLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 71
Query: 427 SLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG-VAKGIAFL 485
+L+ F + D + +Y G L H +S + DR R + + +L
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGELF--FH-----LSRERVFSEDRARFYGAEIVSALDYL 124
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H S K V+ DL+ N++L K+ I+DFGL + E + + GTP
Sbjct: 125 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-----EGIKDGATMKXFCGTP---- 173
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + D + GV++ EM+ G+LP
Sbjct: 174 --------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + ++ L + ++ + +L + K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 134
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL T + + + P++
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 179
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 180 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + ++ P+ S S +++ +A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N ++ ++ I DFG+ R DI E ++ + G P+
Sbjct: 143 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 194
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 195 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAV----AVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIV 426
LLGK T G KV L E+A A++ L TE + RHP +
Sbjct: 17 LLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 73
Query: 427 SLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG-VAKGIAFL 485
+L+ F + D + +Y G L H +S + DR R + + +L
Sbjct: 74 ALKYSFQTHDRLCFVMEYANGGELF--FH-----LSRERVFSEDRARFYGAEIVSALDYL 126
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H S K V+ DL+ N++L K+ I+DFGL + E + + GTP
Sbjct: 127 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-----EGIKDGATMKXFCGTP---- 175
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + D + GV++ EM+ G+LP
Sbjct: 176 --------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 41/250 (16%)
Query: 353 FVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQR 406
FVP + +V + LL+ LG+ + G+VY+ + E VAV+ + R
Sbjct: 7 FVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 407 FK-EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT---AIHGKAGIIS 462
+ EF EA + ++V L L++ + + +G L + ++ +A
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 463 YRPL-SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521
RP + + +++ +A G+A+L+ K++VH DL N ++ + I DFG+ R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 522 ADIAEETPEVHWEQSTTG-TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYS 580
DI E ++ + G P++ + APE+ K T D++S
Sbjct: 179 -DIYETD---YYRKGGKGLLPVR-----------------WMAPESLKDGVFTTSSDMWS 217
Query: 581 YGVILLEMIS 590
+GV+L E+ S
Sbjct: 218 FGVVLWEITS 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 100/283 (35%), Gaps = 62/283 (21%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+F E A+ + H N++ L + K+ + + P GSL + G LS
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS- 118
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
R VA+G+ +L KR++H DL N+LL I DFGL R
Sbjct: 119 ----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR-------- 163
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
L + + + APE+ K R + D + +GV L EM
Sbjct: 164 ------------ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
Query: 589 IS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV--------S 639
+ G+ P I + + + H +DKE E +
Sbjct: 212 FTYGQEPWIGLNGSQ------------------------ILHKIDKEGERLPRPEDCPQD 247
Query: 640 VLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTEQQFMKGEEP 682
+ + + C P+ RP+ + D L + + EEP
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQDFEEP 290
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 32/183 (17%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNIV L + L+ +Y G + + +++ + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL------VAHGRMKEKEAR 116
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ + + + H+ K VH DL+ N+LL +M I+DFG + + E
Sbjct: 117 AKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEF- 172
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
G+P ++P F Y PE D++S GVIL ++SG
Sbjct: 173 -----CGSPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGS 210
Query: 593 LPM 595
LP
Sbjct: 211 LPF 213
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 374 LLGKSTIGIVYKVALNNEEAV----AVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIV 426
LLGK T G KV L E+A A++ L TE + RHP +
Sbjct: 16 LLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 72
Query: 427 SLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG-VAKGIAFL 485
+L+ F + D + +Y G L H +S + DR R + + +L
Sbjct: 73 ALKYSFQTHDRLCFVMEYANGGELF--FH-----LSRERVFSEDRARFYGAEIVSALDYL 125
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H S K V+ DL+ N++L K+ I+DFGL + E + + GTP
Sbjct: 126 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-----EGIKDGATMKXFCGTP---- 174
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + D + GV++ EM+ G+LP
Sbjct: 175 --------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 27/161 (16%)
Query: 460 IISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA 519
I S +PL+ + + +G+ ++H + +H DL+PSN+L+ +N E I DFG+A
Sbjct: 150 IHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 206
Query: 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTA-LNSTTSRSYYQAPEAS-KVRKPTQKWD 577
R L +SP E + + +Y+APE + + TQ D
Sbjct: 207 R--------------------GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAID 246
Query: 578 IYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKP 618
++S G I EM++ + + G ++ +Q I ++L P
Sbjct: 247 LWSVGCIFGEMLARR--QLFPGKNYVHQLQLIMMVLGTPSP 285
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 180
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
P+ T YY+APE + DI+S G I+ EMI G
Sbjct: 181 SFMMVPFVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 375 LGKSTIGIVYKVALNN-EEAVAVRRLG-NGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+GK + G VYK N+ +E VA++ + ++ Q E + + P I +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ +I +Y+ GS + K G PL + I++ + KG+ +LH +R
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL--KPG-----PLEETYIATILREILKGLDYLHS---ER 136
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLA-RLADIAEETPEVHWEQSTTGTPLQSSPYEFTA 551
+H D++ +N+LL + + ++DFG+A +L D + GTP
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK------RNXFVGTP---------- 180
Query: 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603
++ APE K K DI+S G+ +E+ G+ P + M +
Sbjct: 181 --------FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV 224
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L +EF EA + +I+HPN+V L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + ++ L + ++ + +L + K +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 133
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H DL N L+G+N ++DFGL+RL + +T H + P++
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAH---AGAKFPIK---------- 178
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 179 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
Q EA G+++ P++V + F +D +L + + NG A + G PL+
Sbjct: 82 QREARTAGRLQEPHVVPIHD-FGEIDGQLYVDXRLINGVDLAAXLRRQG-----PLAPPR 135
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
+ I++ + + L H D++P NIL+ + ++ DFG+A
Sbjct: 136 AVAIVRQIG---SALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIA----------- 181
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+TT L T L +T YY APE T + DIY+ +L E ++
Sbjct: 182 ----SATTDEKL-------TQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLT 230
Query: 591 GKLP 594
G P
Sbjct: 231 GSPP 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 32/223 (14%)
Query: 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVSLRAY 431
LLG+ G+V E VA++++ F E + + +H NI+++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 432 -----FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
F + +E YI + T +H +IS + LS I + + LH
Sbjct: 78 QRPDSFENFNEV-----YIIQELMQTDLHR---VISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
+ +H DL+PSN+L+ N + + DFGLAR+ D + ++ T QS
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA-------ADNSEPTGQQSGM 179
Query: 547 YEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEM 588
EF A +Y+APE K ++ D++S G IL E+
Sbjct: 180 VEFVATR------WYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 27/156 (17%)
Query: 460 IISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA 519
I S +PL+ + + +G+ ++H + +H DL+PSN+L+ +N E I DFG+A
Sbjct: 149 IHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205
Query: 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTA-LNSTTSRSYYQAPEAS-KVRKPTQKWD 577
R L +SP E + + +Y+APE + + TQ D
Sbjct: 206 R--------------------GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAID 245
Query: 578 IYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLIL 613
++S G I EM++ + + G ++ +Q I ++L
Sbjct: 246 LWSVGCIFGEMLARR--QLFPGKNYVHQLQLIMMVL 279
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV--RKGD 200
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 201 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 236
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 237 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 288
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 289 FSELVEHLGNLLQANAQQ 306
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 412 TEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDR 471
TE + RHP + +L+ F + D + +Y G L H +S + DR
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF--FH-----LSRERVFSEDR 249
Query: 472 LRIIKG-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
R + + +LH S K V+ DL+ N++L K+ I+DFGL + E +
Sbjct: 250 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-----EGIKD 302
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ GTP Y APE + + D + GV++ EM+
Sbjct: 303 GATMKTFCGTP------------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 344
Query: 591 GKLPM 595
G+LP
Sbjct: 345 GRLPF 349
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 361 DFDLEQLLKASAF----LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DFD +LL F L+ + G Y + + +E + + TE+
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRV 58
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
+ RHP + +L+ F + D + +Y G L H +S + +R R
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH-----LSRERVFTEERARFYG 111
Query: 477 G-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
+ + +LH + V+ D++ N++L K+ I+DFGL + E + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMK 163
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
+ GTP Y APE + + D + GV++ EM+ G+LP
Sbjct: 164 TFCGTP------------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 127/310 (40%), Gaps = 60/310 (19%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKI-RHP 423
Q+++A AF + K+ VAV+ L G + +E + + I H
Sbjct: 42 QVIEADAFGIDKTA----------TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 424 NIVSLRAYFWSVDEKLL-IYDYIPNGSLATAIHGKAG-IISYRPLSWSDRLRIIK----- 476
N+V+L L+ I ++ G+L+T + K + Y+ L + D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL-YKDFLTLEHLIXYS 150
Query: 477 -GVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR--DIYKDPDYV--RK 203
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 204 GDARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS----- 241
Query: 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655
+G+ V+ + K T + P + + + LDC H P +R
Sbjct: 242 --LGASPYPGVKIDEEFXRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQR 291
Query: 656 PSMRHVCDSL 665
P+ + + L
Sbjct: 292 PTFSELVEHL 301
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV--RKGD 200
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 201 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 236
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 237 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 288
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 289 FSELVEHLGNLLQANAQQ 306
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 361 DFDLEQLLKASAF----LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DFD +LL F L+ + G Y + + +E + + TE+
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRV 58
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
+ RHP + +L+ F + D + +Y G L H +S + +R R
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH-----LSRERVFTEERARFYG 111
Query: 477 G-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
+ + +LH + V+ D++ N++L K+ I+DFGL + E + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMK 163
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
+ GTP Y APE + + D + GV++ EM+ G+LP
Sbjct: 164 TFCGTP------------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 124/333 (37%), Gaps = 97/333 (29%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNI 425
Q+ KA + GK+ + + +V NNE+A + E +A+ K+ H NI
Sbjct: 27 QVFKAKHRIDGKTYV--IRRVKYNNEKA-----------------EREVKALAKLDHVNI 67
Query: 426 VSLRAYFW--------SVDEKLLIYDYIP----------------------NGSLATAIH 455
V W + D+ L DY P G+L I
Sbjct: 68 VHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 456 GKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISD 515
+ G + L+ L + + + KG+ ++H K+ +H DL+PSNI L + I D
Sbjct: 127 KRRGEKLDKVLA----LELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRS------YYQAPEASKV 569
FGL T+L + R+ Y +PE
Sbjct: 180 FGLV------------------------------TSLKNDGKRTRSKGTLRYMSPEQISS 209
Query: 570 RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAH 629
+ ++ D+Y+ G+IL E++ + ++ I + D+K T +L L+
Sbjct: 210 QDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKT-LLQKLLSK 268
Query: 630 DLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC 662
+ +L+ L KSP+K + RH C
Sbjct: 269 KPEDRPNTSEILR-TLTVWKKSPEK--NERHTC 298
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 32/183 (17%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNIV L + L+ +Y G + + +++ + +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL------VAHGRMKEKEAR 117
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ + + + H+ K VH DL+ N+LL +M I+DFG + + +
Sbjct: 118 AKFRQIVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL---- 170
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
+ G+P ++P F Y PE D++S GVIL ++SG
Sbjct: 171 --DTFCGSPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGS 211
Query: 593 LPM 595
LP
Sbjct: 212 LPF 214
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 412 TEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDR 471
TE + RHP + +L+ F + D + +Y G L H +S + DR
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF--FH-----LSRERVFSEDR 252
Query: 472 LRIIKG-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530
R + + +LH S K V+ DL+ N++L K+ I+DFGL + E +
Sbjct: 253 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-----EGIKD 305
Query: 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ GTP Y APE + + D + GV++ EM+
Sbjct: 306 GATMKTFCGTP------------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 347
Query: 591 GKLPM 595
G+LP
Sbjct: 348 GRLPF 352
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV--RKGD 209
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 210 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 245
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 246 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 297
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 298 FSELVEHLGNLLQANAQQ 315
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 57/209 (27%)
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL-------------GKNM 509
Y P+S +++ +A G+A LH + + +H DL+P NIL+ +N+
Sbjct: 115 YNPIS------LLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENL 165
Query: 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPE---- 565
ISDFGL + D + + LN+ + S ++APE
Sbjct: 166 RILISDFGLCKKLDSGQXXFRXN-------------------LNNPSGTSGWRAPELLEE 206
Query: 566 ---ASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWI-----QLILEDR 616
R+ T+ DI+S G + ++S GK P S E NI++ I L DR
Sbjct: 207 SNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDR 266
Query: 617 KPM---TDILDPFLAHDLDKEDEIVSVLK 642
+ TD++ + HD K + VL+
Sbjct: 267 SLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 361 DFDLEQLLKASAF----LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DFD +LL F L+ + G Y + + +E + + TE+
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRV 61
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
+ RHP + +L+ F + D + +Y G L H +S + +R R
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH-----LSRERVFTEERARFYG 114
Query: 477 G-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
+ + +LH + V+ D++ N++L K+ I+DFGL + E + +
Sbjct: 115 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMK 166
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
+ GTP Y APE + + D + GV++ EM+ G+LP
Sbjct: 167 TFCGTP------------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXV--RKGD 209
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 210 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 245
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 246 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 297
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 298 FSELVEHLGNLLQANAQQ 315
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N ++ ++ I DFG+ R DI E ++ + G P+
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 197
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 198 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV--RKGD 200
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 201 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 236
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 237 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 288
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 289 FSELVEHLGNLLQANAQQ 306
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N ++ ++ I DFG+ R DI E ++ + G P+
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 197
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 198 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 72/186 (38%), Gaps = 28/186 (15%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F E + + P +V L F ++ +Y+P G L + P W+
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-----VPEKWA 176
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
A+ + L + +H D++P N+LL K+ ++DFG D ET
Sbjct: 177 KFY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD---ETG 228
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
VH + + GTP SP L S YY ++ D +S GV L EM+
Sbjct: 229 MVHCD-TAVGTPDYISP---EVLKSQGGDGYY-----------GRECDWWSVGVFLFEML 273
Query: 590 SGKLPM 595
G P
Sbjct: 274 VGDTPF 279
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+P T YY+APE + DI+S G I+ EMI G
Sbjct: 179 SFMMTPEVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N ++ ++ I DFG+ R DI E ++ + G P+
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 204
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 205 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N ++ ++ I DFG+ R DI E ++ + G P+
Sbjct: 144 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 195
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 196 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 37/195 (18%)
Query: 406 RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRP 465
R + E + KI+H NIV+L + S L+ + G L I + G+ + +
Sbjct: 49 RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER-GVYTEK- 106
Query: 466 LSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLA 522
D +I+ V + +LHE VH DL+P N+L +N + I+DFGL+++
Sbjct: 107 ----DASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM- 158
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYG 582
EQ+ + +P Y APE + ++ D +S G
Sbjct: 159 -----------EQNGIMSTACGTP-------------GYVAPEVLAQKPYSKAVDCWSIG 194
Query: 583 VILLEMISGKLPMIQ 597
VI ++ G P +
Sbjct: 195 VITYILLCGYPPFYE 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N ++ ++ I DFG+ R DI E ++ + G P+
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 198
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 199 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV--RKGD 200
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 201 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 236
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 237 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 288
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 289 FSELVEHLGNLLQANAQQ 306
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 31/212 (14%)
Query: 394 VAVRRLGNGGWQR-FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452
VA++ L G + +E EA+ + ++ +P IV L + +L+ + G L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEALMLVMEMAGGGPLHK 424
Query: 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512
+ GK I S+ ++ V+ G+ +L E K +VH +L N+LL
Sbjct: 425 FLVGKREEIPV-----SNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAK 476
Query: 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP 572
ISDFGL++ L + +TA ++ + APE RK
Sbjct: 477 ISDFGLSKA--------------------LGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 573 TQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
+ + D++SYGV + E +S G+ P ++ E+
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 194 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV--RKGD 246
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 247 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 282
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 283 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 334
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 335 FSELVEHLGNLLQANAQQ 352
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDXV--RKGD 209
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 210 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 245
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 246 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 297
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 298 FSELVEHLGNLLQANAQQ 315
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 41/245 (16%)
Query: 374 LLGKSTIGIVYKVALNNEEA----VAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVS 427
+LGK G V + L E+ VAV+ L +EF EA + + HP++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 428 LRAYFWSVDEK------LLIYDYIPNGSLATAIHGKAGIISYRP--LSWSDRLRIIKGVA 479
L K ++I ++ +G L + A I P L +R + +A
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL--LASRIGENPFNLPLQTLVRFMVDIA 147
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
G+ +L S + ++H DL N +L ++M ++DFGL+R + ++ Q
Sbjct: 148 CGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD-----YYRQGCAS 199
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE-MISGKLPMIQI 598
P ++ AL S Y T D++++GV + E M G+ P I
Sbjct: 200 ----KLPVKWLALESLADNLY------------TVHSDVWAFGVTMWEIMTRGQTPYAGI 243
Query: 599 GSMEL 603
+ E+
Sbjct: 244 ENAEI 248
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N ++ ++ I DFG+ R DI E ++ + G P+
Sbjct: 175 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 226
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 227 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 49/260 (18%)
Query: 351 YEF-VPLDSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEA---VAVRRLGNGGWQR 406
Y+F V L S+ + +E L + +G+ T G VYK + + A++++ G
Sbjct: 5 YDFKVKLSSERE-RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM 63
Query: 407 FKEFQTEAEAIGKIRHPNIVSLRAYFWS-VDEKL-LIYDYIPNGSLATAIHGKAGIISYR 464
E + +++HPN++SL+ F S D K+ L++DY A H II +
Sbjct: 64 --SACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY--------AEHDLWHIIKFH 113
Query: 465 PLSWSDR--LRIIKGVAKGIAF-----LHEVSPKRYVHGDLRPSNIL-LGKNMEP---HI 513
S +++ +++ +G+ K + + +H + +H DL+P+NIL +G+ E I
Sbjct: 114 RASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI 173
Query: 514 SDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPE-ASKVRKP 572
+D G ARL + +PL+ L+ +Y+APE R
Sbjct: 174 ADMGFARLFN----------------SPLKP----LADLDPVVVTFWYRAPELLLGARHY 213
Query: 573 TQKWDIYSYGVILLEMISGK 592
T+ DI++ G I E+++ +
Sbjct: 214 TKAIDIWAIGCIFAELLTSE 233
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 97/249 (38%), Gaps = 52/249 (20%)
Query: 357 DSQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGG----WQRFKEFQT 412
+ V+FD ++L+A +GK + G V V N+ + + + N +
Sbjct: 9 NEDVNFDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL----ATAIHGKAGIISYRPLSW 468
E + + + HP +V+L F ++ ++ D + G L +H K +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL----- 119
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
+ + + L + +R +H D++P NILL ++ HI+DF +A +
Sbjct: 120 --------FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML------ 165
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP---TQKWDIYSYGVIL 585
P E T + + Y APE RK + D +S GV
Sbjct: 166 -----------------PRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA 207
Query: 586 LEMISGKLP 594
E++ G+ P
Sbjct: 208 YELLRGRRP 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 29/182 (15%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+F EA + + HPNIV L ++ + + G T + + + + L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-- 215
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
L+++ A G+ +L K +H DL N L+ + ISDFG++R EE
Sbjct: 216 ---LQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSR-----EEA 264
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
V+ + +G L+ P ++T APEA + + + D++S+G++L E
Sbjct: 265 DGVY---AASGG-LRQVPVKWT------------APEALNYGRYSSESDVWSFGILLWET 308
Query: 589 IS 590
S
Sbjct: 309 FS 310
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N ++ ++ I DFG+ R DI E ++ + G P+
Sbjct: 140 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 191
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 192 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 38/225 (16%)
Query: 375 LGKSTIGIVYKVALNNEE-AVAVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLRA 430
LGK G VY VA++ L ++ + + E E + HPNI+ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
YF+ LI +Y P G L + R + I++ +A + + H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT------IMEELADALMYCHG--- 141
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
K+ +H D++P N+LLG E I+DFG + A P + ++ GT
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHA------PSLR-RKTMCGT---------- 184
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
L+ Y PE + R +K D++ GV+ E++ G P
Sbjct: 185 -LD-------YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 32/183 (17%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNIV L + L+ +Y G + + +++ + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL------VAHGRMKEKEAR 116
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ + + + H+ K VH DL+ N+LL +M I+DFG + +
Sbjct: 117 AKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---- 169
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
+ G+P ++P F Y PE D++S GVIL ++SG
Sbjct: 170 --DTFCGSPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGS 210
Query: 593 LPM 595
LP
Sbjct: 211 LPF 213
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 93/240 (38%), Gaps = 45/240 (18%)
Query: 361 DFDLEQLLKASAF----LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DFD +LL F L+ + G Y + + +E + + TE+
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRV 58
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
+ RHP + +L+ F + D + +Y G L H +S + +R R
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH-----LSRERVFTEERARFYG 111
Query: 477 G-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
+ + +LH + V+ D++ N++L K+ I+DFGL + E + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMK 163
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
GTP Y APE + + D + GV++ EM+ G+LP
Sbjct: 164 XFCGTP------------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 159 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV--RKGD 211
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 212 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 247
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 248 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 299
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 300 FSELVEHLGNLLQANAQQ 317
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 93/240 (38%), Gaps = 45/240 (18%)
Query: 361 DFDLEQLLKASAF----LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DFD +LL F L+ + G Y + + +E + + TE+
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRV 63
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
+ RHP + +L+ F + D + +Y G L H +S + +R R
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH-----LSRERVFTEERARFYG 116
Query: 477 G-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
+ + +LH + V+ D++ N++L K+ I+DFGL + E + +
Sbjct: 117 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMK 168
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
GTP Y APE + + D + GV++ EM+ G+LP
Sbjct: 169 XFCGTP------------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 93/240 (38%), Gaps = 45/240 (18%)
Query: 361 DFDLEQLLKASAF----LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DFD +LL F L+ + G Y + + +E + + TE+
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRV 58
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
+ RHP + +L+ F + D + +Y G L H +S + +R R
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH-----LSRERVFTEERARFYG 111
Query: 477 G-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
+ + +LH + V+ D++ N++L K+ I+DFGL + E + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMK 163
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
GTP Y APE + + D + GV++ EM+ G+LP
Sbjct: 164 XFCGTP------------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 32/183 (17%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNIV L + L+ +Y G + + +++ + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL------VAHGRMKEKEAR 116
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ + + + H+ K VH DL+ N+LL +M I+DFG + +
Sbjct: 117 AKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---- 169
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
+ G+P ++P F Y PE D++S GVIL ++SG
Sbjct: 170 --DTFCGSPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGS 210
Query: 593 LPM 595
LP
Sbjct: 211 LPF 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 32/183 (17%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNIV L + L+ +Y G + + +++ + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL------VAHGRMKEKEAR 116
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ + + + H+ K VH DL+ N+LL +M I+DFG + +
Sbjct: 117 AKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---- 169
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
+ G+P ++P F Y PE D++S GVIL ++SG
Sbjct: 170 --DTFCGSPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGS 210
Query: 593 LPM 595
LP
Sbjct: 211 LPF 213
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 353 FVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQR 406
FVP + +V + LL+ LG+ + G+VY+ + E VAV+ + R
Sbjct: 7 FVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 407 FK-EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT---AIHGKAGIIS 462
+ EF EA + ++V L L++ + + +G L + ++ +A
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 463 YRPL-SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521
RP + + +++ +A G+A+L+ K++VH DL N ++ + I DFG+ R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSY 581
DI E + + P++ + APE+ K T D++S+
Sbjct: 179 -DIXET--DXXRKGGKGLLPVR-----------------WMAPESLKDGVFTTSSDMWSF 218
Query: 582 GVILLEMIS 590
GV+L E+ S
Sbjct: 219 GVVLWEITS 227
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 93/240 (38%), Gaps = 45/240 (18%)
Query: 361 DFDLEQLLKASAF----LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA 416
DFD +LL F L+ + G Y + + +E + + TE+
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-------DEVAHTVTESRV 58
Query: 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476
+ RHP + +L+ F + D + +Y G L H +S + +R R
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFH-----LSRERVFTEERARFYG 111
Query: 477 G-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQ 535
+ + +LH + V+ D++ N++L K+ I+DFGL + E + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMK 163
Query: 536 STTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
GTP Y APE + + D + GV++ EM+ G+LP
Sbjct: 164 XFCGTP------------------EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYV--RKGD 209
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 210 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 245
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 246 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 297
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 298 FSELVEHLGNLLQANAQQ 315
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 353 FVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQR 406
FVP + +V + LL+ LG+ + G+VY+ + E VAV+ + R
Sbjct: 4 FVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 59
Query: 407 FK-EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT---AIHGKAGIIS 462
+ EF EA + ++V L L++ + + +G L + ++ +A
Sbjct: 60 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 463 YRPL-SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521
RP + + +++ +A G+A+L+ K++VH DL N ++ + I DFG+ R
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR- 175
Query: 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSY 581
DI E + + P++ + APE+ K T D++S+
Sbjct: 176 -DIXE--TDXXRKGGKGLLPVR-----------------WMAPESLKDGVFTTSSDMWSF 215
Query: 582 GVILLEMIS 590
GV+L E+ S
Sbjct: 216 GVVLWEITS 224
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 20/226 (8%)
Query: 374 LLGKSTIGIVY-KVALNNEEAVAVRRLGNGGWQRF---KEFQTEAEAIGKIRHPNIVSLR 429
L+G+ + G VY N E+ VA++++ N ++ K E + +++ I+ R
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRLKSDYII--R 89
Query: 430 AYFWSVDEKLLIYD--YIPNGSLATAIHGKAGIISYRPLSWSDRLR-IIKGVAKGIAFLH 486
Y + + LL +D YI L A + + ++ I+ + G F+H
Sbjct: 90 LYDLIIPDDLLKFDELYI---VLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH-WEQSTTGTPLQSS 545
E +H DL+P+N LL ++ + DFGLAR + ++T V+ E++ P +
Sbjct: 147 ESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMIS 590
+ L S +Y+APE +++ T+ DI+S G I E+++
Sbjct: 204 LKK--QLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L + +EF EA + +I+HPN+V L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + +S L + ++ + +L + K +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 339
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H +L N L+G+N ++DFGL+RL T + + + P++
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 384
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 385 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 32/223 (14%)
Query: 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVSLRAY 431
LLG+ G+V E VA++++ F E + + +H NI+++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 432 -----FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
F + +E YI + T +H +IS + LS I + + LH
Sbjct: 78 QRPDSFENFNEV-----YIIQELMQTDLHR---VISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
+ +H DL+PSN+L+ N + + DFGLAR+ D + ++ T QS
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA-------ADNSEPTGQQSGM 179
Query: 547 YEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEM 588
E+ A +Y+APE K ++ D++S G IL E+
Sbjct: 180 TEYVATR------WYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 38/224 (16%)
Query: 374 LLGKSTIGIVYK-VALNNEEAVAVRRL-----GNGGWQRFKEFQTEAEAIGKIRHPNIVS 427
+LG G V+K V + E++ + G Q F+ AIG + H +IV
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL-SWSDRLRIIKGVAKGIAFLH 486
L +L + Y+P GSL + G + + L +W + +AKG+ +L
Sbjct: 98 LLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLE 150
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
E VH +L N+LL + ++DFG+A L + + ++ + ++ T P
Sbjct: 151 E---HGMVHRNLAARNVLLKSPSQVQVADFGVADL--LPPDDKQLLYSEAKT-------P 198
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ AL S Y T + D++SYGV + E+++
Sbjct: 199 IKWMALESIHFGKY------------THQSDVWSYGVTVWELMT 230
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVR--KGD 261
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 262 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 297
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 298 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 349
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 350 FSELVEHLGNLLQANAQQ 367
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 34/224 (15%)
Query: 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVSLRAY 431
LLG+ G+V E VA++++ F E + + +H NI+++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 432 -----FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH 486
F + +E YI + T +H +IS + LS I + + LH
Sbjct: 78 QRPDSFENFNEV-----YIIQELMQTDLHR---VISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD-IAEETPEVHWEQSTTGTPLQSS 545
+ +H DL+PSN+L+ N + + DFGLAR+ D A + E +QS
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS--------- 177
Query: 546 PYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEM 588
+ + +Y+APE K ++ D++S G IL E+
Sbjct: 178 -----GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 38/224 (16%)
Query: 374 LLGKSTIGIVYK-VALNNEEAVAVRRL-----GNGGWQRFKEFQTEAEAIGKIRHPNIVS 427
+LG G V+K V + E++ + G Q F+ AIG + H +IV
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL-SWSDRLRIIKGVAKGIAFLH 486
L +L + Y+P GSL + G + + L +W + +AKG+ +L
Sbjct: 80 LLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLE 132
Query: 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546
E VH +L N+LL + ++DFG+A L + + ++ + ++ T P
Sbjct: 133 E---HGMVHRNLAARNVLLKSPSQVQVADFGVADL--LPPDDKQLLYSEAKT-------P 180
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ AL S Y T + D++SYGV + E+++
Sbjct: 181 IKWMALESIHFGKY------------THQSDVWSYGVTVWELMT 212
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVR--KGD 259
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 260 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 295
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 296 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 347
Query: 658 MRHVCDSLDRVNISTEQQ 675
+ + L + + QQ
Sbjct: 348 FSELVEHLGNLLQANAQQ 365
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 29/114 (25%)
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
+G+ FLH R VH DL+P NIL+ + + ++DFGLAR+
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI------------------ 169
Query: 540 TPLQSSPYEF-TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
Y F AL S +Y+APE D++S G I EM K
Sbjct: 170 -------YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 36/179 (20%)
Query: 421 RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAK 480
+HPNI++L+ + L+ + + G L I + S R S+ ++ + K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-RQKFFSEREASF-----VLHTIGK 132
Query: 481 GIAFLHEVSPKRYVHGDLRPSNIL-LGKNMEPH---ISDFGLARLADIAEETPEVHWEQS 536
+ +LH + VH DL+PSNIL + ++ P I DFG A+ ++ E
Sbjct: 133 TVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK---------QLRAENG 180
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
TP +TA + APE K + + DI+S G++L M++G P
Sbjct: 181 LLMTPC------YTA--------NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 32/183 (17%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNIV L + L+ +Y G + + +++ + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL------VAHGRMKEKEAR 116
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ + + + H+ K VH DL+ N+LL +M I+DFG + +
Sbjct: 117 AKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---- 169
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
+ G P ++P F Y PE D++S GVIL ++SG
Sbjct: 170 --DAFCGAPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGS 210
Query: 593 LPM 595
LP
Sbjct: 211 LPF 213
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 35/234 (14%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYF 432
LG G+V KV + R+L + + Q E + + + P IV F
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+S E + +++ GSL + I P ++ I V +G+A+L E +
Sbjct: 84 YSDGEISICMEHMDGGSLDQVLKEAKRI----PEEILGKVSI--AVLRGLAYLRE--KHQ 135
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+H D++PSNIL+ E + DFG+ +G + S F
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGV-------------------SGQLIDSMANSFVGT 176
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606
S Y APE + + + DI+S G+ L+E+ G+ P+ + EL +
Sbjct: 177 RS------YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI 224
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ + E VAV+ + R + EF EA + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLAT---AIHGKAGIISYRPL-SWSDRLRIIKGVAKGIA 483
L L++ + + +G L + ++ +A RP + + +++ +A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ K++VH DL N ++ + I DFG+ R DI E ++ + G P+
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 195
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + APE+ K T D++S+GV+L E+ S
Sbjct: 196 R-----------------WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 29/114 (25%)
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
+G+ FLH R VH DL+P NIL+ + + ++DFGLAR+
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI------------------ 169
Query: 540 TPLQSSPYEF-TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
Y F AL S +Y+APE D++S G I EM K
Sbjct: 170 -------YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 32/183 (17%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + HPNIV L + L+ +Y G + + +++ + +
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL------VAHGWMKEKEAR 109
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ + + + H+ K VH DL+ N+LL +M I+DFG + +
Sbjct: 110 AKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---- 162
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
+ G+P ++P F Y PE D++S GVIL ++SG
Sbjct: 163 --DTFCGSPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGS 203
Query: 593 LPM 595
LP
Sbjct: 204 LPF 206
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 88/229 (38%), Gaps = 35/229 (15%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE-----FQTEAEAIGKIRHPNIVSL 428
++G+ G V V + N E + ++ N W+ K F+ E + + I +L
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNK-WEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG-VAKGIAFLHE 487
F + L+ DY G L T + + D R G + I +H+
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP------EDMARFYIGEMVLAIDSIHQ 193
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFG-LARLADIAEETPEVHWEQSTTGTPLQSSP 546
+ YVH D++P N+LL N ++DFG ++ D V GTP SP
Sbjct: 194 L---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV-----AVGTPDYISP 245
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
A+ + PE D +S GV + EM+ G+ P
Sbjct: 246 EILQAMEDGMGK---YGPEC----------DWWSLGVCMYEMLYGETPF 281
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 29/114 (25%)
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
+G+ FLH R VH DL+P NIL+ + + ++DFGLAR+
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI------------------ 169
Query: 540 TPLQSSPYEF-TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
Y F AL S +Y+APE D++S G I EM K
Sbjct: 170 -------YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 88/229 (38%), Gaps = 35/229 (15%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE-----FQTEAEAIGKIRHPNIVSL 428
++G+ G V V + N E + ++ N W+ K F+ E + + I +L
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNK-WEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG-VAKGIAFLHE 487
F + L+ DY G L T + + D R G + I +H+
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLLS------KFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 488 VSPKRYVHGDLRPSNILLGKNMEPHISDFG-LARLADIAEETPEVHWEQSTTGTPLQSSP 546
+ YVH D++P N+LL N ++DFG ++ D V GTP SP
Sbjct: 210 L---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV-----AVGTPDYISP 261
Query: 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
A+ + PE D +S GV + EM+ G+ P
Sbjct: 262 EILQAMEDGMGK---YGPEC----------DWWSLGVCMYEMLYGETPF 297
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 51/212 (24%)
Query: 392 EAVAVRRLGNGGWQRFKEFQTEAEA---------IGKIRHPNIVSLRAYFWSVDEKLLIY 442
E VA+++L + FQ+E A + ++H N++ L F Y
Sbjct: 50 EKVAIKKLS-------RPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102
Query: 443 D-YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
D Y+ + T + G+ S ++ + KG+ ++H VH DL+P
Sbjct: 103 DFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPG 155
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+ + ++ E I DFGLAR AD AE T V +Y
Sbjct: 156 NLAVNEDCELKILDFGLARHAD-AEMTGYV-------------------------VTRWY 189
Query: 562 QAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+APE Q DI+S G I+ EM++GK
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+F EA + + HPNIV L ++ + + G T + + + + L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-- 215
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
L+++ A G+ +L K +H DL N L+ + ISDFG++R EE
Sbjct: 216 ---LQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSR-----EEA 264
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
V L+ P ++T APEA + + + D++S+G++L E
Sbjct: 265 DGV----XAASGGLRQVPVKWT------------APEALNYGRYSSESDVWSFGILLWET 308
Query: 589 IS 590
S
Sbjct: 309 FS 310
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE----FQTEAEAIGKIRHPNIVSLRA 430
+G+ + G V K+A+ ++ +RR + F E F+ E E + + HPNI+ L
Sbjct: 17 IGRGSWGEV-KIAV--QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
F + L+ + G L ++ R SD RI+K V +A+ H+++
Sbjct: 74 TFEDNTDIYLVMELCTGGELFER------VVHKRVFRESDAARIMKDVLSAVAYCHKLN- 126
Query: 491 KRYVHGDLRPSNILL---GKNMEPHISDFGLA 519
H DL+P N L + + DFGLA
Sbjct: 127 --VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 54/301 (17%)
Query: 374 LLGKSTIGIVYKVALNNEEA----VAVRRLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSL 428
+LG+ G VY+ N + VAV+ KE F +EA + + HP+IV L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEV 488
+ +I + P G L + + L + + K +A+L +
Sbjct: 91 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTL-----VLYSLQICKAMAYLESI 144
Query: 489 SPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYE 548
+ VH D+ NIL+ + DFGL+R + E +++ S T P++
Sbjct: 145 NC---VHRDIAVRNILVASPECVKLGDFGLSRYIE-----DEDYYKASVTRLPIK----- 191
Query: 549 FTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQ 607
+ +PE+ R+ T D++ + V + E++S GK P + + ++ V
Sbjct: 192 ------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV- 238
Query: 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667
L DR P D+ P L + + C P RP + SL
Sbjct: 239 ---LEKGDRLPKPDLCPPVLYTLMTR-------------CWDYDPSDRPRFTELVCSLSD 282
Query: 668 V 668
V
Sbjct: 283 V 283
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 34/236 (14%)
Query: 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYF 432
L+G T G VYK +A ++ + +E + E + K H NI + F
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 433 WS-----VDEKL-LIYDYIPNGSLATAIHGKAG-IISYRPLSWSDRLRIIKGVAKGIAFL 485
+D++L L+ ++ GS+ I G + +++ I + + +G++ L
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-----ICREILRGLSHL 145
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H+ + +H D++ N+LL +N E + DFG++ D V + GTP +
Sbjct: 146 HQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-----VGRRNTFIGTPYWMA 197
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601
P E A + +Y K D++S G+ +EM G P+ + M
Sbjct: 198 P-EVIACDENPDATY------------DFKSDLWSLGITAIEMAEGAPPLCDMHPM 240
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKE----FQTEAEAIGKIRHPNIVSLRA 430
+G+ + G V K+A+ ++ +RR + F E F+ E E + + HPNI+ L
Sbjct: 34 IGRGSWGEV-KIAV--QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
F + L+ + G L ++ R SD RI+K V +A+ H+++
Sbjct: 91 TFEDNTDIYLVMELCTGGELFER------VVHKRVFRESDAARIMKDVLSAVAYCHKLN- 143
Query: 491 KRYVHGDLRPSNILL---GKNMEPHISDFGLA 519
H DL+P N L + + DFGLA
Sbjct: 144 --VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 97/266 (36%), Gaps = 62/266 (23%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+F E A+ + H N++ L + K+ + + P GSL + G LS
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS- 118
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
R VA+G+ +L KR++H DL N+LL I DFGL R +
Sbjct: 119 ----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQN 168
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
+ + Q P + APE+ K R + D + +GV L EM
Sbjct: 169 DDHYVMQEHRKVPFA-----------------WCAPESLKTRTFSHASDTWMFGVTLWEM 211
Query: 589 IS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV--------S 639
+ G+ P I + + + H +DKE E +
Sbjct: 212 FTYGQEPWIGLNGSQ------------------------ILHKIDKEGERLPRPEDCPQD 247
Query: 640 VLKIALDCVHKSPDKRPSMRHVCDSL 665
+ + + C P+ RP+ + D L
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 85/212 (40%), Gaps = 51/212 (24%)
Query: 392 EAVAVRRLGNGGWQRFKEFQTEAEA---------IGKIRHPNIVSLRAYFWSVDEKLLIY 442
E VA+++L + FQ+E A + ++H N++ L F Y
Sbjct: 68 EKVAIKKLS-------RPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120
Query: 443 D-YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
D Y+ + T + G+ S ++ + KG+ ++H VH DL+P
Sbjct: 121 DFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPG 173
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+ + ++ E I DFGLAR AD E T T +Y
Sbjct: 174 NLAVNEDCELKILDFGLARHADA-----------------------EMTGYVVT---RWY 207
Query: 562 QAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+APE Q DI+S G I+ EM++GK
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 54/301 (17%)
Query: 374 LLGKSTIGIVYKVALNNEEA----VAVRRLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSL 428
+LG+ G VY+ N + VAV+ KE F +EA + + HP+IV L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEV 488
+ +I + P G L + + L + + K +A+L +
Sbjct: 79 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTL-----VLYSLQICKAMAYLESI 132
Query: 489 SPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYE 548
+ VH D+ NIL+ + DFGL+R + E +++ S T P++
Sbjct: 133 NC---VHRDIAVRNILVASPECVKLGDFGLSRYIE-----DEDYYKASVTRLPIK----- 179
Query: 549 FTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQ 607
+ +PE+ R+ T D++ + V + E++S GK P + + ++ V
Sbjct: 180 ------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV- 226
Query: 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667
L DR P D+ P L + + C P RP + SL
Sbjct: 227 ---LEKGDRLPKPDLCPPVLYTLMTR-------------CWDYDPSDRPRFTELVCSLSD 270
Query: 668 V 668
V
Sbjct: 271 V 271
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 97/266 (36%), Gaps = 62/266 (23%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+F E A+ + H N++ L + K+ + + P GSL + G LS
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS- 114
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
R VA+G+ +L KR++H DL N+LL I DFGL R +
Sbjct: 115 ----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQN 164
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
+ + Q P + APE+ K R + D + +GV L EM
Sbjct: 165 DDHYVMQEHRKVPFA-----------------WCAPESLKTRTFSHASDTWMFGVTLWEM 207
Query: 589 IS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV--------S 639
+ G+ P I + + + H +DKE E +
Sbjct: 208 FTYGQEPWIGLNGSQ------------------------ILHKIDKEGERLPRPEDCPQD 243
Query: 640 VLKIALDCVHKSPDKRPSMRHVCDSL 665
+ + + C P+ RP+ + D L
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 36/178 (20%)
Query: 421 RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAK 480
+HPNI++L+ + L+ + + G L I + S R S+ ++ + K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-RQKFFSEREASF-----VLHTIGK 132
Query: 481 GIAFLHEVSPKRYVHGDLRPSNIL-LGKNMEPH---ISDFGLARLADIAEETPEVHWEQS 536
+ +LH + VH DL+PSNIL + ++ P I DFG A+ ++ E
Sbjct: 133 TVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK---------QLRAENG 180
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
TP +TA + APE K + + DI+S G++L M++G P
Sbjct: 181 LLMTPC------YTA--------NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 31/143 (21%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T T
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAST 176
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600
+PY T YY+APE + DI+S G I+ E++ G + I
Sbjct: 177 NFMMTPYVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV----IFQ 224
Query: 601 MELNIVQWIQLILEDRKPMTDIL 623
+I QW ++I + P + +
Sbjct: 225 GTDHIDQWNKVIEQLGTPSAEFM 247
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 54/301 (17%)
Query: 374 LLGKSTIGIVYKVALNNEEA----VAVRRLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSL 428
+LG+ G VY+ N + VAV+ KE F +EA + + HP+IV L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEV 488
+ +I + P G L + + L + + K +A+L +
Sbjct: 75 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTL-----VLYSLQICKAMAYLESI 128
Query: 489 SPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYE 548
+ VH D+ NIL+ + DFGL+R + E +++ S T P++
Sbjct: 129 NC---VHRDIAVRNILVASPECVKLGDFGLSRYIE-----DEDYYKASVTRLPIK----- 175
Query: 549 FTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQ 607
+ +PE+ R+ T D++ + V + E++S GK P + + ++ V
Sbjct: 176 ------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV- 222
Query: 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667
L DR P D+ P L + + C P RP + SL
Sbjct: 223 ---LEKGDRLPKPDLCPPVLYTLMTR-------------CWDYDPSDRPRFTELVCSLSD 266
Query: 668 V 668
V
Sbjct: 267 V 267
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 97/266 (36%), Gaps = 62/266 (23%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+F E A+ + H N++ L + K+ + + P GSL + G LS
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS- 114
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
R VA+G+ +L KR++H DL N+LL I DFGL R +
Sbjct: 115 ----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQN 164
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
+ + Q P + APE+ K R + D + +GV L EM
Sbjct: 165 DDHYVMQEHRKVPFA-----------------WCAPESLKTRTFSHASDTWMFGVTLWEM 207
Query: 589 IS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV--------S 639
+ G+ P I + + + H +DKE E +
Sbjct: 208 FTYGQEPWIGLNGSQ------------------------ILHKIDKEGERLPRPEDCPQD 243
Query: 640 VLKIALDCVHKSPDKRPSMRHVCDSL 665
+ + + C P+ RP+ + D L
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 97/266 (36%), Gaps = 62/266 (23%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+F E A+ + H N++ L + K+ + + P GSL + G LS
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS- 124
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
R VA+G+ +L KR++H DL N+LL I DFGL R +
Sbjct: 125 ----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQN 174
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
+ + Q P + APE+ K R + D + +GV L EM
Sbjct: 175 DDHYVMQEHRKVPFA-----------------WCAPESLKTRTFSHASDTWMFGVTLWEM 217
Query: 589 IS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV--------S 639
+ G+ P I + + + H +DKE E +
Sbjct: 218 FTYGQEPWIGLNGSQ------------------------ILHKIDKEGERLPRPEDCPQD 253
Query: 640 VLKIALDCVHKSPDKRPSMRHVCDSL 665
+ + + C P+ RP+ + D L
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
P T YY+APE + DI+S G I+ EM+ K+
Sbjct: 179 SFMMEPEVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI 223
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 37/228 (16%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG-TPL 542
+L+ ++VH DL N + ++ I DFG+ R DI E ++ + G P+
Sbjct: 140 YLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETD---YYRKGGKGLLPV 191
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ + +PE+ K T D++S+GV+L E+ +
Sbjct: 192 R-----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 353 FVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQR 406
+VP + +V + LL+ LG+ + G+VY+ + E VAV+ + R
Sbjct: 7 YVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 407 FK-EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT---AIHGKAGIIS 462
+ EF EA + ++V L L++ + + +G L + ++ +A
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 463 YRPL-SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521
RP + + +++ +A G+A+L+ K++VH DL N ++ + I DFG+ R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSY 581
DI E + + P++ + APE+ K T D++S+
Sbjct: 179 -DIXET--DXXRKGGKGLLPVR-----------------WMAPESLKDGVFTTSSDMWSF 218
Query: 582 GVILLEMIS 590
GV+L E+ S
Sbjct: 219 GVVLWEITS 227
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
+L+ ++VH DL N ++ ++ I DFG+ R DI E + + P++
Sbjct: 138 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXE--TDXXRKGGKGLLPVR 190
Query: 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ +PE+ K T D++S+GV+L E+ +
Sbjct: 191 -----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 39/188 (20%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVR--KGD 254
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 255 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 290
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 291 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 342
Query: 658 MRHVCDSL 665
+ + L
Sbjct: 343 FSELVEHL 350
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 39/188 (20%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+ FL + ++ +H DL NILL + I DFGLAR DI ++ V +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVR--KGD 252
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
PL+ + APE R T + D++S+GV+L E+ S
Sbjct: 253 ARLPLK-----------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------- 288
Query: 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657
+G+ V+ + K T + P + + + LDC H P +RP+
Sbjct: 289 LGASPYPGVKIDEEFCRRLKEGTRMRAP--------DYTTPEMYQTMLDCWHGEPSQRPT 340
Query: 658 MRHVCDSL 665
+ + L
Sbjct: 341 FSELVEHL 348
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 394 VAVRRLGN--GGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW---SVDEKLLIYDYIPNG 448
VAV++L K E + ++H N++ L F S++E +Y
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY------ 103
Query: 449 SLATAIHGKA--GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG 506
L T + G I+ + L+ +I + +G+ ++H +H DL+PSN+ +
Sbjct: 104 -LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVN 159
Query: 507 KNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEA 566
++ E I DFGLAR H + TG + +Y+APE
Sbjct: 160 EDCELKILDFGLAR-----------HTDDEMTG---------------YVATRWYRAPEI 193
Query: 567 S-KVRKPTQKWDIYSYGVILLEMISGK 592
Q DI+S G I+ E+++G+
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 118/316 (37%), Gaps = 88/316 (27%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNI 425
Q+ KA + GK+ + + +V NNE+A + E +A+ K+ H NI
Sbjct: 26 QVFKAKHRIDGKTYV--IKRVKYNNEKA-----------------EREVKALAKLDHVNI 66
Query: 426 VSLRAYFWSVDEK----------------LLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
V + D + ++ G+L I + G + L+
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA-- 124
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
L + + + KG+ ++H K+ ++ DL+PSNI L + I DFGL
Sbjct: 125 --LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV---------- 169
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
T L++ + + Y +PE + ++ D+Y+ G+IL E++
Sbjct: 170 ----------TSLKNDGKRXRSKGTLR----YMSPEQISSQDYGKEVDLYALGLILAELL 215
Query: 590 SGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649
E K TD+ D ++ DK+++ + +
Sbjct: 216 -----------------HVCDTAFETSKFFTDLRDGIISDIFDKKEKT-----LLQKLLS 253
Query: 650 KSPDKRPSMRHVCDSL 665
K P+ RP+ + +L
Sbjct: 254 KKPEDRPNTSEILRTL 269
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 99/266 (37%), Gaps = 62/266 (23%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+F E A+ + H N++ L + K+ + + P GSL + G LS
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS- 114
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
R VA+G+ +L KR++H DL N+LL I DFGL R A +
Sbjct: 115 ----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDD 166
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
V E + P+ + APE+ K R + D + +GV L EM
Sbjct: 167 HXVMQEH-------RKVPFAWC------------APESLKTRTFSHASDTWMFGVTLWEM 207
Query: 589 IS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV--------S 639
+ G+ P I + + + H +DKE E +
Sbjct: 208 FTYGQEPWIGLNGSQ------------------------ILHKIDKEGERLPRPEDCPQD 243
Query: 640 VLKIALDCVHKSPDKRPSMRHVCDSL 665
+ + + C P+ RP+ + D L
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 99/266 (37%), Gaps = 62/266 (23%)
Query: 409 EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSW 468
+F E A+ + H N++ L + K+ + + P GSL + G LS
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS- 124
Query: 469 SDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
R VA+G+ +L KR++H DL N+LL I DFGL R A +
Sbjct: 125 ----RYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDD 176
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
V E + P+ + APE+ K R + D + +GV L EM
Sbjct: 177 HXVMQEH-------RKVPFAWC------------APESLKTRTFSHASDTWMFGVTLWEM 217
Query: 589 IS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIV--------S 639
+ G+ P I + + + H +DKE E +
Sbjct: 218 FTYGQEPWIGLNGSQ------------------------ILHKIDKEGERLPRPEDCPQD 253
Query: 640 VLKIALDCVHKSPDKRPSMRHVCDSL 665
+ + + C P+ RP+ + D L
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 375 LGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQRFK-EFQTEAEAIGKIRHPNIVS 427
LG+ + G+VY+ V E VA++ + R + EF EA + + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL----SWSDRLRIIKGVAKGIA 483
L L+I + + G L + + + P+ S S +++ +A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 484 FLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
+L+ ++VH DL N ++ ++ I DFG+ R DI E + + P++
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXE--TDXXRKGGKGLLPVR 199
Query: 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ +PE+ K T D++S+GV+L E+ +
Sbjct: 200 -----------------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 41/250 (16%)
Query: 353 FVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQR 406
+VP + +V + LL+ LG+ + G+VY+ + E VAV+ + R
Sbjct: 7 YVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 407 FK-EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT---AIHGKAGIIS 462
+ EF EA + ++V L L++ + + +G L + ++ +A
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 463 YRPL-SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521
RP + + +++ +A G+A+L+ K++VH +L N ++ + I DFG+ R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 522 ADIAEETPEVHWEQSTTG-TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYS 580
DI E ++ + G P++ + APE+ K T D++S
Sbjct: 179 -DIYETD---YYRKGGKGLLPVR-----------------WMAPESLKDGVFTTSSDMWS 217
Query: 581 YGVILLEMIS 590
+GV+L E+ S
Sbjct: 218 FGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 41/250 (16%)
Query: 353 FVPLDSQVDFDLEQLLKASAFLLGKSTIGIVYK------VALNNEEAVAVRRLGNGGWQR 406
+VP + +V + LL+ LG+ + G+VY+ + E VAV+ + R
Sbjct: 8 YVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 63
Query: 407 FK-EFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT---AIHGKAGIIS 462
+ EF EA + ++V L L++ + + +G L + ++ +A
Sbjct: 64 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 463 YRPL-SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521
RP + + +++ +A G+A+L+ K++VH +L N ++ + I DFG+ R
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR- 179
Query: 522 ADIAEETPEVHWEQSTTG-TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYS 580
DI E ++ + G P++ + APE+ K T D++S
Sbjct: 180 -DIYETD---YYRKGGKGLLPVR-----------------WMAPESLKDGVFTTSSDMWS 218
Query: 581 YGVILLEMIS 590
+GV+L E+ S
Sbjct: 219 FGVVLWEITS 228
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 38/227 (16%)
Query: 375 LGKSTIGIV---YKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
LGK +V KV E A + + ++ + EA ++HPNIV L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
LI+D + G L I++ S +D I+ + + + H++
Sbjct: 79 ISEEGHHYLIFDLVTGGELFE------DIVAREYYSEADASHCIQQILEAVLHCHQMG-- 130
Query: 492 RYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYE 548
VH +L+P N+LL K ++DFGLA I E + W GTP
Sbjct: 131 -VVHRNLKPENLLLASKLKGAAVKLADFGLA----IEVEGEQQAW-FGFAGTP------- 177
Query: 549 FTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y +PE + + D+++ GVIL ++ G P
Sbjct: 178 -----------GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L + +EF EA + +I+HPN+V L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + ++ L + ++ + +L + K +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 336
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H +L N L+G+N ++DFGL+RL T + + + P++
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 381
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 382 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G VY+ V VAV+ L + +EF EA + +I+HPN+V L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
+I +++ G+L + + + ++ L + ++ + +L + K +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 378
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
+H +L N L+G+N ++DFGL+RL T + + + P++
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIK---------- 423
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+ APE+ K + K D++++GV+L E+ +
Sbjct: 424 -------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 38/227 (16%)
Query: 375 LGKSTIGIVYKVALNNE--EAVAVRR--LGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRA 430
+G+ T G V+K A N E E VA++R L + E + +++H NIV L
Sbjct: 10 IGEGTYGTVFK-AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
S + L++++ + L G + + + + KG+ F H
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVK-----SFLFQLLKGLGFCHS--- 119
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
+ +H DL+P N+L+ +N E ++DFGLAR G P++ E
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLAR----------------AFGIPVRCYSAEVV 163
Query: 551 ALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
L +Y+ P+ + + D++S G I E+ + P+
Sbjct: 164 TL-------WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLF 203
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 44/209 (21%)
Query: 392 EAVAVRRLGNGGWQRFKEFQT--EAEAIGKIRHPNIVSLRAYFW---SVDEKLLIYDYIP 446
+ VAV++L +T E + ++H N++ L F S+++ +Y
Sbjct: 46 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVY---- 101
Query: 447 NGSLATAIHGKA--GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNIL 504
L T + G I+ + LS ++ + +G+ ++H +H DL+PSN+
Sbjct: 102 ---LVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVA 155
Query: 505 LGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAP 564
+ ++ E I DFGLAR AD + TG + +Y+AP
Sbjct: 156 VNEDCELRILDFGLARQAD-----------EEMTGY---------------VATRWYRAP 189
Query: 565 EAS-KVRKPTQKWDIYSYGVILLEMISGK 592
E Q DI+S G I+ E++ GK
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 114/296 (38%), Gaps = 58/296 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR------FKEFQTEAEAIGKIRHPNIVSL 428
+G+ + G+V N A+ ++ N R + +TE + K+ HPNI L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 429 RAYFWSVDEKLLIYDYIPNGSLATAIH-------GKAG---------------------- 459
+ L+ + G L ++ GK
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 460 IISYR-PLSWSDRLRIIKGVAKGI-AFLHEVSPKRYVHGDLRPSNILLG--KNMEPHISD 515
I +R L + R ++I + + I + LH + + H D++P N L K+ E + D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK 575
FGL++ E + + GTP +P LN TT+ SY P K
Sbjct: 214 FGLSK-EFYKLNNGEYYGMTTKAGTPYFVAP---EVLN-TTNESY--GP----------K 256
Query: 576 WDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDL 631
D +S GV+L ++ G +P + + I Q + L P ++L P LA DL
Sbjct: 257 CDAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKKLCFENPNYNVLSP-LARDL 310
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 98/260 (37%), Gaps = 54/260 (20%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+ E + KI+H NIV+L + S + L+ + G L I K G + + D
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK-GFYTEK-----D 121
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH---ISDFGLARLADIAEE 527
+I+ V + +LH + VH DL+P N+L E ISDFGL+++ E
Sbjct: 122 ASTLIRQVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM----EG 174
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
+V + GTP Y APE + ++ D +S GVI
Sbjct: 175 KGDVM--STACGTPG------------------YVAPEVLAQKPYSKAVDCWSIGVIAYI 214
Query: 588 MISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDC 647
++ G P D K IL D D+I K D
Sbjct: 215 LLCGYPPFYDEN---------------DSKLFEQILKAEYEFDSPYWDDISDSAK---DF 256
Query: 648 VHKSPDKRPSMRHVCDSLDR 667
+ +K P+ R+ C+ R
Sbjct: 257 IRNLMEKDPNKRYTCEQAAR 276
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 51/243 (20%)
Query: 366 QLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN 424
+++ A+A+ + K+ + I V + E+A + R + +E + + ++ H N
Sbjct: 60 KVMNATAYGISKTGVSIQVAVKMLKEKADSSER---------EALMSELKMMTQLGSHEN 110
Query: 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIIS-----------------YRPLS 467
IV+L LI++Y G L + K S L+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527
+ D L VAKG+ FL K VH DL N+L+ I DFGLAR DI +
Sbjct: 171 FEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLAR--DIMSD 225
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
+ V + P++ + APE+ T K D++SYG++L E
Sbjct: 226 SNYVV--RGNARLPVK-----------------WMAPESLFEGIYTIKSDVWSYGILLWE 266
Query: 588 MIS 590
+ S
Sbjct: 267 IFS 269
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 42/186 (22%)
Query: 413 EAEAIGKIRHPNIVSLRAYFW---SVDEKLLIYDYIPNGSLATAIHGKA--GIISYRPLS 467
E + ++H N++ L F S+++ +Y L T + G I+ + LS
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVY-------LVTTLMGADLNNIVKSQALS 129
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527
++ + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR AD
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD---- 182
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILL 586
+ TG + +Y+APE Q DI+S G I+
Sbjct: 183 -------EEMTGY---------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 587 EMISGK 592
E++ GK
Sbjct: 221 ELLQGK 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T T
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TACT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
+PY T YY+APE DI+S G I+ E++ G
Sbjct: 179 NFMMTPYVVT--------RYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 27/113 (23%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGT 540
GI LH +H DL+PSNI++ + I DFGLAR T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGT 178
Query: 541 PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593
P T YY+APE + D++S G I+ EM+ K+
Sbjct: 179 SFMMEPEVVT--------RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 223
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 42/186 (22%)
Query: 413 EAEAIGKIRHPNIVSLRAYFW---SVDEKLLIYDYIPNGSLATAIHGKA--GIISYRPLS 467
E + ++H N++ L F S+++ +Y L T + G I+ + LS
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVY-------LVTTLMGADLNNIVKCQALS 129
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527
++ + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR AD
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD---- 182
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILL 586
+ TG + +Y+APE Q DI+S G I+
Sbjct: 183 -------EEMTGY---------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 587 EMISGK 592
E++ GK
Sbjct: 221 ELLQGK 226
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 57/232 (24%)
Query: 374 LLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGWQRFKE-----FQTEAEAIGKIRHPNIVS 427
LG+ VYK N + VA++++ G K+ E + + ++ HPNI+
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 428 LRAYFWSVDEKLLIYDYIP---------NGSLATAIHGKAGIISYRPLSWSDRLRIIKGV 478
L F L++D++ N + T H KA ++
Sbjct: 77 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM---------------T 121
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTT 538
+G+ +LH+ +H DL+P+N+LL +N ++DFGLA+ +
Sbjct: 122 LQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAK----------------SF 162
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMI 589
G+P ++ ++ +Y+APE R D+++ G IL E++
Sbjct: 163 GSPNRAYXHQVVT-------RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 42/191 (21%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFW---SVDEKLLIYDYIPNGSLATAIHGKA--GIIS 462
K E + ++H N++ L F S++E +Y L T + G I+
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMGADLNNIVK 118
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522
+ L+ +I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR
Sbjct: 119 XQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-- 173
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSY 581
H + TG + +Y+APE Q DI+S
Sbjct: 174 ---------HTDDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSV 209
Query: 582 GVILLEMISGK 592
G I+ E+++G+
Sbjct: 210 GCIMAELLTGR 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 375 LGKSTIGIVYKVA-LNNEEAVAVRR-LGNGGWQRFKEFQ-TEAEAIGKIRHPNIVSLRAY 431
+G+ + G+V+K + + VA+++ L + K+ E + +++HPN+V+L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISY--RPLSWSDRLRIIKGVAKGIAFLHEVS 489
F L+++Y + L + G+ + + ++W + + F H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHK-- 120
Query: 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARL----ADIAEETPEVHWEQS 536
+H D++P NIL+ K+ + DFG ARL +D ++ W +S
Sbjct: 121 -HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRS 170
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----------HT 180
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 181 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----------HT 180
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 181 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 127 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 172
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 173 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + ++H NIV+L + L+++Y+ + L + II+ +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKL---- 104
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
+ + +G+A+ H ++ +H DL+P N+L+ + E ++DFGLAR I +T
Sbjct: 105 -FLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 42/191 (21%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFW---SVDEKLLIYDYIPNGSLATAIHGKA--GIIS 462
K E + ++H N++ L F S++E +Y L T + G I+
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMGADLNNIVK 118
Query: 463 YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522
+ L+ +I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR
Sbjct: 119 XQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSY 581
H + TG + +Y+APE Q DI+S
Sbjct: 174 ---------HTDDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSV 209
Query: 582 GVILLEMISGK 592
G I+ E+++G+
Sbjct: 210 GCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 141 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----------HT 186
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 187 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 171
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 172 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 180
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 181 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 182
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 183 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 180
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 181 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 129 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 174
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 175 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 181
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 182 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 127 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 172
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 173 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 128 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 173
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 174 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 177
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 178 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 141 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 186
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 187 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 86/231 (37%), Gaps = 46/231 (19%)
Query: 375 LGKSTIGIVYKVAL---NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
LGK +V + E A + + ++ + EA ++HPNIV L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
L++D + G L I++ S +D I + + + +H+
Sbjct: 99 ISEEGFHYLVFDLVTGGELFE------DIVAREYYSEADASHCIHQILESVNHIHQ---H 149
Query: 492 RYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQST----TGTPLQS 544
VH DL+P N+LL K ++DFGLA EV EQ GTP
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLA---------IEVQGEQQAWFGFAGTP--- 197
Query: 545 SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y +PE + + DI++ GVIL ++ G P
Sbjct: 198 ---------------GYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 177
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 178 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 177
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 178 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 142 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 187
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 188 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 153 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 198
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 199 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 142 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 187
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 188 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 142 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 187
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 188 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 374 LLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK Y++ ++ +E A + + + ++ TE + +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 430 AYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS 489
+F D ++ + SL +H + ++ + ++ +G+ +LH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-----FMRQTIQGVQYLHN-- 160
Query: 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549
R +H DL+ N+ L +M+ I DFGLA + E +++ GTP
Sbjct: 161 -NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-----KKTLCGTP-------- 206
Query: 550 TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + DI+S G IL ++ GK P
Sbjct: 207 ----------NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 36/226 (15%)
Query: 374 LLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK Y++ ++ +E A + + + ++ TE + +P++V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 430 AYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS 489
+F D ++ + SL +H + ++ + ++ +G+ +LH
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARY-----FMRQTIQGVQYLHN-- 144
Query: 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549
R +H DL+ N+ L +M+ I DFGLA + E ++ GTP
Sbjct: 145 -NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-----KKDLCGTP-------- 190
Query: 550 TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + DI+S G IL ++ GK P
Sbjct: 191 ----------NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 34/188 (18%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+TE E + K+ HP I+ ++ +F ++ ++ + + G L + G R +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK-----RLKEATC 255
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP---HISDFGLARLADIAEE 527
+L + + + +LHE +H DL+P N+LL E I+DFG +++
Sbjct: 256 KLYFYQMLL-AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---- 307
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
E ++ GTP +P L S + Y +A D +S GVIL
Sbjct: 308 --ETSLMRTLCGTPTYLAP---EVLVSVGTAGYNRAV------------DCWSLGVILFI 350
Query: 588 MISGKLPM 595
+SG P
Sbjct: 351 CLSGYPPF 358
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 171
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 172 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 120/279 (43%), Gaps = 55/279 (19%)
Query: 375 LGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG G+V+ N+ ++ VA++++ Q K E + I ++ H NIV +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 434 SVDEKL---------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF 484
+L L YI + T + A ++ PL + + +G+ +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDL---ANVLEQGPLLEEHARLFMYQLLRGLKY 135
Query: 485 LHEVSPKRYVHGDLRPSNILLG-KNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
+H + +H DL+P+N+ + +++ I DFGLAR+ D H+
Sbjct: 136 IHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMD-------PHYSHK------- 178
Query: 544 SSPYEFTALNSTTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGKLPMIQIGS 600
L+ +Y++P + P T+ D+++ G I EM++GK + G+
Sbjct: 179 ------GHLSEGLVTKWYRSPRL--LLSPNNYTKAIDMWAAGCIFAEMLTGK--TLFAGA 228
Query: 601 MELNIVQWIQLIL--------EDRKPMTDILDPFLAHDL 631
EL + +QLIL EDR+ + ++ ++ +D+
Sbjct: 229 HEL---EQMQLILESIPVVHEEDRQELLSVIPVYIRNDM 264
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 140 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 185
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 186 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 150 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 195
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 196 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 34/188 (18%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+TE E + K+ HP I+ ++ +F ++ ++ + + G L + G R +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK-----RLKEATC 241
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP---HISDFGLARLADIAEE 527
+L + + + +LHE +H DL+P N+LL E I+DFG +++
Sbjct: 242 KLYFYQMLL-AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---- 293
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
E ++ GTP +P L S + Y +A D +S GVIL
Sbjct: 294 --ETSLMRTLCGTPTYLAP---EVLVSVGTAGYNRAV------------DCWSLGVILFI 336
Query: 588 MISGKLPM 595
+SG P
Sbjct: 337 CLSGYPPF 344
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 171
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 172 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 149 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 194
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 195 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 45/235 (19%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSLRAY- 431
LG G V + + + E VA+++ + +E + E + + K+ HPN+VS R
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 432 -----FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYR--PLSWSDRLRIIKGVAKGIAF 484
D LL +Y G L ++ + P+ ++ ++ + +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRY 136
Query: 485 LHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
LHE R +H DL+P NI+L + + I D G A+ D E E GT
Sbjct: 137 LHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF------VGT- 186
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
LQ Y APE + +K T D +S+G + E I+G P +
Sbjct: 187 LQ-----------------YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----------HT 177
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 178 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 45/235 (19%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSLRAY- 431
LG G V + + + E VA+++ + +E + E + + K+ HPN+VS R
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 432 -----FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYR--PLSWSDRLRIIKGVAKGIAF 484
D LL +Y G L ++ + P+ ++ ++ + +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRY 137
Query: 485 LHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
LHE R +H DL+P NI+L + + I D G A+ D E E GT
Sbjct: 138 LHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF------VGT- 187
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
LQ Y APE + +K T D +S+G + E I+G P +
Sbjct: 188 LQ-----------------YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----------HT 181
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 182 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 181
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 182 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 150 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 195
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 196 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 32/173 (18%)
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
P + L + F +VD + +Y+ G L I + + ++ + I G+
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GL 133
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
FLH+ + ++ DL+ N++L I+DFG+ + H T
Sbjct: 134 FFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK----------EHMMDGVTTREF 180
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
+P Y APE + + D ++YGV+L EM++G+ P
Sbjct: 181 CGTPD-------------YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 149 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 194
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 195 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 106/253 (41%), Gaps = 36/253 (14%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIV----YKVALNNEEAVAVR 397
D +E +++ + + S D+++++ +G+ G V Y N AVA++
Sbjct: 365 DDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIK 424
Query: 398 RLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHG 456
N +E F EA + + HP+IV L + + +I + G L + +
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ- 482
Query: 457 KAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDF 516
+ L + + ++ +A+L KR+VH D+ N+L+ N + DF
Sbjct: 483 ----VRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDF 535
Query: 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKW 576
GL+R + + +++ S P++ + APE+ R+ T
Sbjct: 536 GLSRYMEDS-----TYYKASKGKLPIK-----------------WMAPESINFRRFTSAS 573
Query: 577 DIYSYGVILLEMI 589
D++ +GV + E++
Sbjct: 574 DVWMFGVCMWEIL 586
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 181
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 182 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 32/174 (18%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HP + + F + + + +Y+ G L I R ++ + + G
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL------G 131
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+ FLH K V+ DL+ NILL K+ I+DFG+ + + + GTP
Sbjct: 132 LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-----NEFCGTP 183
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE +K D +S+GV+L EM+ G+ P
Sbjct: 184 ------------------DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 34/223 (15%)
Query: 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSN 502
+Y N +L IH + + R W R+ + + + ++++H + +H +L+P N
Sbjct: 95 EYCENRTLYDLIHSE-NLNQQRDEYW----RLFRQILEALSYIH---SQGIIHRNLKPXN 146
Query: 503 ILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQ 562
I + ++ I DFGLA+ VH Q+ P L S + Y
Sbjct: 147 IFIDESRNVKIGDFGLAK---------NVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYV 197
Query: 563 APEA-SKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTD 621
A E +K D YS G+I E I P G +NI++ ++ + + P
Sbjct: 198 ATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPF-STGXERVNILKKLRSVSIEFPP--- 250
Query: 622 ILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664
F + E +I+ +L + P+KRP R + +S
Sbjct: 251 ---DFDDNKXKVEKKIIRLL------IDHDPNKRPGARTLLNS 284
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 36/226 (15%)
Query: 374 LLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK Y++ ++ +E A + + + ++ TE + +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 430 AYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS 489
+F D ++ + SL +H + ++ + ++ +G+ +LH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-----FMRQTIQGVQYLHN-- 160
Query: 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549
R +H DL+ N+ L +M+ I DFGLA + E ++ GTP
Sbjct: 161 -NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-----KKDLCGTP-------- 206
Query: 550 TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + DI+S G IL ++ GK P
Sbjct: 207 ----------NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
Query: 407 FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL 466
F+E + + G H N++ L +F D L+++ + GS+ + IH + R
Sbjct: 58 FREVEMLYQCQG---HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR------RHF 108
Query: 467 SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK--NMEP-HISDFGLARLAD 523
+ + +++ VA + FLH K H DL+P NIL + P I DFGL
Sbjct: 109 NELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFGLG---- 161
Query: 524 IAEETPEVHWEQSTTGTPL--QSSPYEFTALNSTTSRSYYQAPE-----ASKVRKPTQKW 576
+G L SP L + + Y APE + + ++
Sbjct: 162 --------------SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207
Query: 577 DIYSYGVILLEMISGKLPMI 596
D++S GVIL ++SG P +
Sbjct: 208 DLWSLGVILYILLSGYPPFV 227
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 32/174 (18%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HP + + F + + + +Y+ G L I R ++ + + G
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL------G 130
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+ FLH K V+ DL+ NILL K+ I+DFG+ + + + GTP
Sbjct: 131 LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-----NXFCGTP 182
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE +K D +S+GV+L EM+ G+ P
Sbjct: 183 ------------------DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 32/174 (18%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
H ++V +F D ++ + SL +H + + L+ + ++ + G
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRR-----KALTEPEARYYLRQIVLG 129
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+LH R +H DL+ N+ L +++E I DFGLA + E +++ GTP
Sbjct: 130 CQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-----KKTLCGTP 181
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + D++S G I+ ++ GK P
Sbjct: 182 ------------------NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+TE E + K+ HP I+ ++ +F ++ ++ + + G L + G + R +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATC 116
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP---HISDFGLARLADIAEE 527
+L + + + +LHE +H DL+P N+LL E I+DFG +++
Sbjct: 117 KLYFYQMLL-AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---- 168
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
E ++ GTP +P L S + Y +A D +S GVIL
Sbjct: 169 --ETSLMRTLCGTPTYLAP---EVLVSVGTAGYNRA------------VDCWSLGVILFI 211
Query: 588 MISGKLPM 595
+SG P
Sbjct: 212 CLSGYPPF 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 32/174 (18%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
H ++V +F D ++ + SL +H + + L+ + ++ + G
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRR-----KALTEPEARYYLRQIVLG 129
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+LH R +H DL+ N+ L +++E I DFGLA + E +++ GTP
Sbjct: 130 CQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-----KKTLCGTP 181
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + D++S G I+ ++ GK P
Sbjct: 182 ------------------NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+TE E + K+ HP I+ ++ +F ++ ++ + + G L + G + R +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATC 116
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP---HISDFGLARLADIAEE 527
+L + + + +LHE +H DL+P N+LL E I+DFG +++
Sbjct: 117 KLYFYQMLL-AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---- 168
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
E ++ GTP +P L S + Y +A D +S GVIL
Sbjct: 169 --ETSLMRTLCGTPTYLAP---EVLVSVGTAGYNRA------------VDCWSLGVILFI 211
Query: 588 MISGKLPM 595
+SG P
Sbjct: 212 CLSGYPPF 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+TE E + K+ HP I+ ++ +F ++ ++ + + G L + G + R +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATC 115
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP---HISDFGLARLADIAEE 527
+L + + + +LHE +H DL+P N+LL E I+DFG +++
Sbjct: 116 KLYFYQMLL-AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---- 167
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
E ++ GTP +P L S + Y +A D +S GVIL
Sbjct: 168 --ETSLMRTLCGTPTYLAP---EVLVSVGTAGYNRA------------VDCWSLGVILFI 210
Query: 588 MISGKLPM 595
+SG P
Sbjct: 211 CLSGYPPF 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+TE E + K+ HP I+ ++ +F ++ ++ + + G L + G + R +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATC 116
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP---HISDFGLARLADIAEE 527
+L + + + +LHE +H DL+P N+LL E I+DFG +++
Sbjct: 117 KLYFYQMLL-AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---- 168
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
E ++ GTP +P L S + Y +A D +S GVIL
Sbjct: 169 --ETSLMRTLCGTPTYLAP---EVLVSVGTAGYNRA------------VDCWSLGVILFI 211
Query: 588 MISGKLPM 595
+SG P
Sbjct: 212 CLSGYPPF 219
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 45/189 (23%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA-RLADIAEETPEVH 532
++K + KG+ +LH ++ +H D++ +N+LL + + ++DFG+A +L D +
Sbjct: 125 MLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK----- 176
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
+ GTP ++ APE + K DI+S G+ +E+ G+
Sbjct: 177 -RNTFVGTP------------------FWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
Query: 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSP 652
P + M + ++ P P L D K S + C++K P
Sbjct: 218 PPNSDMHPMR------VLFLIPKNNP------PTLVGDFTK-----SFKEFIDACLNKDP 260
Query: 653 DKRPSMRHV 661
RP+ + +
Sbjct: 261 SFRPTAKEL 269
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
H ++V +F D ++ + SL +H + + L+ + ++ + G
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRR-----KALTEPEARYYLRQIVLG 127
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+LH R +H DL+ N+ L +++E I DFGLA + E +V GTP
Sbjct: 128 CQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-----LCGTP 179
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + D++S G I+ ++ GK P
Sbjct: 180 ------------------NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 411 QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSD 470
+TE E + K+ HP I+ ++ +F ++ ++ + + G L + G + R +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATC 122
Query: 471 RLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP---HISDFGLARLADIAEE 527
+L + + + +LHE +H DL+P N+LL E I+DFG +++
Sbjct: 123 KLYFYQMLL-AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---- 174
Query: 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587
E ++ GTP +P L S + Y +A D +S GVIL
Sbjct: 175 --ETSLMRTLCGTPTYLAP---EVLVSVGTAGYNRA------------VDCWSLGVILFI 217
Query: 588 MISGKLPM 595
+SG P
Sbjct: 218 CLSGYPPF 225
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 37/157 (23%)
Query: 450 LATAIHGKAGIISYRP---LSWSDRLRIIKGVAKGIAFLHEVSP--------KRYVHGDL 498
L TA H K + Y ++W++ + + +++G+++LHE P H D
Sbjct: 90 LITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDF 149
Query: 499 RPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSR 558
+ N+LL ++ ++DFGLA + + + H + T
Sbjct: 150 KSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT--------------------- 188
Query: 559 SYYQAPEASK-----VRKPTQKWDIYSYGVILLEMIS 590
Y APE + R + D+Y+ G++L E++S
Sbjct: 189 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 182
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 183 ADEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 182
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 183 ADEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 36/226 (15%)
Query: 374 LLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLR 429
LGK Y++ ++ +E A + + + ++ TE + +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 430 AYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS 489
+F D ++ + SL +H + ++ + ++ +G+ +LH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-----FMRQTIQGVQYLHN-- 160
Query: 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549
R +H DL+ N+ L +M+ I DFGLA + E ++ GTP
Sbjct: 161 -NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-----KKXLCGTP-------- 206
Query: 550 TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + DI+S G IL ++ GK P
Sbjct: 207 ----------NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 32/174 (18%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
H ++V +F D ++ + SL +H + + L+ + ++ + G
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRR-----KALTEPEARYYLRQIVLG 133
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+LH R +H DL+ N+ L +++E I DFGLA + E +++ GTP
Sbjct: 134 CQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-----KKTLCGTP 185
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + D++S G I+ ++ GK P
Sbjct: 186 ------------------NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 182
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 183 ADEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I D+GLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 32/208 (15%)
Query: 383 VYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLI 441
+Y N AVA++ N +E F EA + + HP+IV L + + +I
Sbjct: 30 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII 88
Query: 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ G L + + + L + + ++ +A+L KR+VH D+
Sbjct: 89 MELCTLGELRSFLQ-----VRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAAR 140
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+L+ N + DFGL+R + + +++ S P++ +
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIK-----------------W 178
Query: 562 QAPEASKVRKPTQKWDIYSYGVILLEMI 589
APE+ R+ T D++ +GV + E++
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 36/178 (20%)
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI--HGKAGIISYRPLSWSDRLRIIKG 477
+ HPNIV L + L+ +Y G + + HG+ R +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK--------FRQ 121
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ + + H+ K VH DL+ N+LL + I+DFG + + +
Sbjct: 122 IVSAVQYCHQ---KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL------DAF 172
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
G P ++P F Y PE D++S GVIL ++SG LP
Sbjct: 173 CGAPPYAAPELFQG-------KKYDGPEV----------DVWSLGVILYTLVSGSLPF 213
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR D
Sbjct: 150 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 196
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 197 ----------------DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
H ++V +F D ++ + SL +H + + L+ + ++ + G
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRR-----KALTEPEARYYLRQIVLG 151
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+LH R +H DL+ N+ L +++E I DFGLA + E +V GTP
Sbjct: 152 CQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-----LCGTP 203
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + D++S G I+ ++ GK P
Sbjct: 204 ------------------NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 36/237 (15%)
Query: 358 SQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEE----AVAVRRLGNGGWQRFKE-FQT 412
S D+++++ +G+ G V++ + E AVA++ N +E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
EA + + HP+IV L + + +I + G L + + + L + +
Sbjct: 61 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLI 114
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
++ +A+L KR+VH D+ N+L+ N + DFGL+R + + +
Sbjct: 115 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TY 166
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
++ S P++ + APE+ R+ T D++ +GV + E++
Sbjct: 167 YKASKGKLPIK-----------------WMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 36/237 (15%)
Query: 358 SQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEE----AVAVRRLGNGGWQRFKE-FQT 412
S D+++++ +G+ G V++ + E AVA++ N +E F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
EA + + HP+IV L + + +I + G L + + + L + +
Sbjct: 89 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLI 142
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
++ +A+L KR+VH D+ N+L+ N + DFGL+R + + +
Sbjct: 143 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TY 194
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
++ S P++ + APE+ R+ T D++ +GV + E++
Sbjct: 195 YKASKGKLPIK-----------------WMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
H ++V +F D ++ + SL +H + + L+ + ++ + G
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRR-----KALTEPEARYYLRQIVLG 153
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+LH R +H DL+ N+ L +++E I DFGLA + E +V GTP
Sbjct: 154 CQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-----LCGTP 205
Query: 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + + + D++S G I+ ++ GK P
Sbjct: 206 ------------------NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 38/227 (16%)
Query: 375 LGKSTIGIVYKVALNNE--EAVAVRR--LGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRA 430
+G+ T G V+K A N E E VA++R L + E + +++H NIV L
Sbjct: 10 IGEGTYGTVFK-AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
S + L++++ + L G + + + + KG+ F H
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVK-----SFLFQLLKGLGFCHS--- 119
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
+ +H DL+P N+L+ +N E +++FGLAR G P++ E
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLAR----------------AFGIPVRCYSAEVV 163
Query: 551 ALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
L +Y+ P+ + + D++S G I E+ + P+
Sbjct: 164 TL-------WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 46/231 (19%)
Query: 375 LGKSTIGIV---YKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+GK +V K+ +E A + + ++ + EA ++H NIV L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
L++D + G L I++ S +D I+ + + + H++
Sbjct: 72 ISEEGFHYLVFDLVTGGELFE------DIVAREYYSEADASHCIQQILEAVLHCHQMG-- 123
Query: 492 RYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQST----TGTPLQS 544
VH DL+P N+LL K ++DFGLA EV +Q GTP
Sbjct: 124 -VVHRDLKPENLLLASKCKGAAVKLADFGLA---------IEVQGDQQAWFGFAGTP--- 170
Query: 545 SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y +PE + + DI++ GVIL ++ G P
Sbjct: 171 ---------------GYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR D
Sbjct: 153 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 199
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 200 ----------------DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 36/237 (15%)
Query: 358 SQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEE----AVAVRRLGNGGWQRFKE-FQT 412
S D+++++ +G+ G V++ + E AVA++ N +E F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
EA + + HP+IV L + + +I + G L + + + L + +
Sbjct: 66 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLI 119
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
++ +A+L KR+VH D+ N+L+ N + DFGL+R + +
Sbjct: 120 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-----DSTY 171
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
++ S P++ + APE+ R+ T D++ +GV + E++
Sbjct: 172 YKASKGKLPIK-----------------WMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 36/237 (15%)
Query: 358 SQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEE----AVAVRRLGNGGWQRFKE-FQT 412
S D+++++ +G+ G V++ + E AVA++ N +E F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
EA + + HP+IV L + + +I + G L + + + L + +
Sbjct: 64 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLI 117
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
++ +A+L KR+VH D+ N+L+ N + DFGL+R + + +
Sbjct: 118 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TY 169
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
++ S P++ + APE+ R+ T D++ +GV + E++
Sbjct: 170 YKASKGKLPIK-----------------WMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ G F A +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMAG---------FVATR------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ G F A +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMAG---------FVATR------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 90/230 (39%), Gaps = 40/230 (17%)
Query: 374 LLGKSTIGIVYKV----ALNNEEAVAVRRLGNGGWQR----FKEFQTEAEAIGKIRHPNI 425
+LGK G V++V N + A++ L R + E + +++HP I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 426 VSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
V L F + + LI +Y+ G L + + GI + + ++ + L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACF-----YLAEISMALGHL 137
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H+ K ++ DL+P NI+L ++DFGL + S
Sbjct: 138 HQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-----------------------ES 171
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
++ T ++ Y APE + D +S G ++ +M++G P
Sbjct: 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 36/237 (15%)
Query: 358 SQVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEE----AVAVRRLGNGGWQRFKE-FQT 412
S D+++++ +G+ G V++ + E AVA++ N +E F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
EA + + HP+IV L + + +I + G L + + + L + +
Sbjct: 63 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLI 116
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
++ +A+L KR+VH D+ N+L+ N + DFGL+R + + +
Sbjct: 117 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TY 168
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
++ S P++ + APE+ R+ T D++ +GV + E++
Sbjct: 169 YKASKGKLPIK-----------------WMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 171
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ G F A +Y+APE Q DI+S G I+ E+++G+
Sbjct: 172 DDEMAG---------FVATR------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 110 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 162
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 163 YYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
Query: 591 -GKLP 594
G+ P
Sbjct: 206 YGQKP 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 108 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 160
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 161 YYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
Query: 591 -GKLP 594
G+ P
Sbjct: 204 YGQKP 208
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 45/193 (23%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+AFL + K +H DL NILL I DFGLAR DI ++ V +
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYV--VKGN 206
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI---SGKLP 594
P++ + APE+ T + D++SYG+ L E+ S P
Sbjct: 207 ARLPVK-----------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249
Query: 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK 654
+ + S ++ ++I E + ++ P +D+ K C P K
Sbjct: 250 GMPVDS------KFYKMIKEGFRMLSPEHAPAEMYDIMKT------------CWDADPLK 291
Query: 655 RPSMRHVCDSLDR 667
RP+ + + +++
Sbjct: 292 RPTFKQIVQLIEK 304
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 32/208 (15%)
Query: 383 VYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLI 441
+Y N AVA++ N +E F EA + + HP+IV L + + +I
Sbjct: 27 IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII 85
Query: 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ G L + + + L + + ++ +A+L KR+VH D+
Sbjct: 86 MELCTLGELRSFLQ-----VRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAAR 137
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+L+ N + DFGL+R + + +++ S P++ +
Sbjct: 138 NVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIK-----------------W 175
Query: 562 QAPEASKVRKPTQKWDIYSYGVILLEMI 589
APE+ R+ T D++ +GV + E++
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 92/234 (39%), Gaps = 62/234 (26%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQT--------EAEAIGKIRHPNI 425
LG+ T G VYK + E VA++R+ R + + E + +++H NI
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI------RLEHEEEGVPGTAIREVSLLKELQHRNI 95
Query: 426 VSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG----VAKG 481
+ L++ LI++Y N + Y + +R+IK + G
Sbjct: 96 IELKSVIHHNHRLHLIFEYAEND-----------LKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPH-----ISDFGLARLADIAEETPEVHWEQS 536
+ F H +R +H DL+P N+LL + I DFGLAR
Sbjct: 145 VNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR---------------- 185
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMI 589
G P++ +E L +Y+ PE R + DI+S I EM+
Sbjct: 186 AFGIPIRQFTHEIITL-------WYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 421 RHPNIVSLRAYF--WSVDEKLLIY-DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+H ++V YF W+ D+ +LI +Y GSLA AI I+SY ++ ++
Sbjct: 67 QHSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY--FKEAELKDLLLQ 121
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511
V +G+ ++H +S VH D++PSNI + + P
Sbjct: 122 VGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 152
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 114 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 166
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 167 YYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 591 -GKLP 594
G+ P
Sbjct: 210 YGQKP 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 120 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 172
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 173 YYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
Query: 591 -GKLP 594
G+ P
Sbjct: 216 YGQKP 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 45/193 (23%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+AFL + K +H DL NILL I DFGLAR DI ++ V +
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYV--VKGN 224
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI---SGKLP 594
P++ + APE+ T + D++SYG+ L E+ S P
Sbjct: 225 ARLPVK-----------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 267
Query: 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK 654
+ + S ++ ++I E + ++ P +D+ K C P K
Sbjct: 268 GMPVDS------KFYKMIKEGFRMLSPEHAPAEMYDIMKT------------CWDADPLK 309
Query: 655 RPSMRHVCDSLDR 667
RP+ + + +++
Sbjct: 310 RPTFKQIVQLIEK 322
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGL R H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 123/303 (40%), Gaps = 55/303 (18%)
Query: 374 LLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGWQRF--KEFQTEAEAIGKIRHPNIVSLRA 430
L+G+ + G+V K + VA+++ + K E + + ++RH N+V+L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 431 YFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP 490
L+++++ + L G L + + + + GI F H
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG------LDYQVVQKYLFQIINGIGFCH---S 142
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
+H D++P NIL+ ++ + DFG AR T P +
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFAR----------------TLAAPGE------- 179
Query: 551 ALNSTTSRSYYQAPE--ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608
+ + +Y+APE V K + D+++ G ++ EM G+ P+ G +++ +
Sbjct: 180 VYDDEVATRWYRAPELLVGDV-KYGKAVDVWAIGCLVTEMFMGE-PLFP-GDSDIDQLYH 236
Query: 609 IQLILEDRKPMTDIL---DPFLA----------HDLDKEDEIVS--VLKIALDCVHKSPD 653
I + L + P L +P A L++ +S V+ +A C+H PD
Sbjct: 237 IMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPD 296
Query: 654 KRP 656
KRP
Sbjct: 297 KRP 299
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 421 RHPNIVSLRAYF--WSVDEKLLIY-DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+H ++V YF W+ D+ +LI +Y GSLA AI I+SY ++ ++
Sbjct: 67 QHSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY--FKEAELKDLLLQ 121
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511
V +G+ ++H +S VH D++PSNI + + P
Sbjct: 122 VGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 152
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 130 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 182
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 183 YYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 591 -GKLP 594
G+ P
Sbjct: 226 YGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 130 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 182
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 183 YYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 591 -GKLP 594
G+ P
Sbjct: 226 YGQKP 230
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 421 RHPNIVSLRAYF--WSVDEKLLIY-DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+H ++V YF W+ D+ +LI +Y GSLA AI I+SY ++ ++
Sbjct: 65 QHSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY--FKEAELKDLLLQ 119
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511
V +G+ ++H +S VH D++PSNI + + P
Sbjct: 120 VGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 150
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 421 RHPNIVSLRAYF--WSVDEKLLIY-DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKG 477
+H ++V YF W+ D+ +LI +Y GSLA AI I+SY ++ ++
Sbjct: 69 QHSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY--FKEAELKDLLLQ 123
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511
V +G+ ++H +S VH D++PSNI + + P
Sbjct: 124 VGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 154
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 45/193 (23%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+AFL + K +H DL NILL I DFGLAR DI ++ V +
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYV--VKGN 229
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI---SGKLP 594
P++ + APE+ T + D++SYG+ L E+ S P
Sbjct: 230 ARLPVK-----------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 272
Query: 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK 654
+ + S ++ ++I E + ++ P +D+ K C P K
Sbjct: 273 GMPVDS------KFYKMIKEGFRMLSPEHAPAEMYDIMK------------TCWDADPLK 314
Query: 655 RPSMRHVCDSLDR 667
RP+ + + +++
Sbjct: 315 RPTFKQIVQLIEK 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 45/193 (23%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+AFL + K +H DL NILL I DFGLAR DI ++ V +
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYV--VKGN 222
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI---SGKLP 594
P++ + APE+ T + D++SYG+ L E+ S P
Sbjct: 223 ARLPVK-----------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 265
Query: 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK 654
+ + S ++ ++I E + ++ P +D+ K C P K
Sbjct: 266 GMPVDS------KFYKMIKEGFRMLSPEHAPAEMYDIMKT------------CWDADPLK 307
Query: 655 RPSMRHVCDSLDR 667
RP+ + + +++
Sbjct: 308 RPTFKQIVQLIEK 320
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 47/220 (21%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI--HGKAGIISYRP 465
++ + EA ++HP+IV L + S ++++++ L I AG + Y
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSE 129
Query: 466 LSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG--KNMEP-HISDFGLARLA 522
S +R I + + + H+ +H D++P N+LL +N P + DFG+A
Sbjct: 130 AVASHYMRQI---LEALRYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA--I 181
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK-WDIYSY 581
+ E GTP ++ APE K R+P K D++
Sbjct: 182 QLGESGLVA---GGRVGTP------------------HFMAPEVVK-REPYGKPVDVWGC 219
Query: 582 GVILLEMISGKLPM----------IQIGSMELNIVQWIQL 611
GVIL ++SG LP I G ++N QW +
Sbjct: 220 GVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 259
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 15/151 (9%)
Query: 375 LGKSTIGIV---YKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
LGK +V K+ E A + + ++ + EA ++HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
L++D + G L I++ S +D I+ + + + H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFE------DIVAREYYSEADASHCIQQILESVNHCH---LN 122
Query: 492 RYVHGDLRPSNILLG---KNMEPHISDFGLA 519
VH DL+P N+LL K ++DFGLA
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 128 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 180
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 181 YYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
Query: 591 -GKLP 594
G+ P
Sbjct: 224 YGQKP 228
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 89/230 (38%), Gaps = 40/230 (17%)
Query: 374 LLGKSTIGIVYKV----ALNNEEAVAVRRLGNGGWQR----FKEFQTEAEAIGKIRHPNI 425
+LGK G V++V N + A++ L R + E + +++HP I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 426 VSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL 485
V L F + + LI +Y+ G L + + GI + + ++ + L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACF-----YLAEISMALGHL 137
Query: 486 HEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSS 545
H+ K ++ DL+P NI+L ++DFGL + S
Sbjct: 138 HQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-----------------------ES 171
Query: 546 PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
++ T + Y APE + D +S G ++ +M++G P
Sbjct: 172 IHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
I+ + G F+HE +H DL+P+N LL ++ I DFGLAR + ++H
Sbjct: 136 ILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTIN---SDKDIHI 189
Query: 534 EQSTTGTPLQSSPYEFTA-----LNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLE 587
P L S +Y+APE +++ T DI+S G I E
Sbjct: 190 VNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAE 249
Query: 588 MIS 590
+++
Sbjct: 250 LLN 252
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 15/151 (9%)
Query: 375 LGKSTIGIV---YKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
LGK +V K+ E A + + ++ + EA ++HPNIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491
L++D + G L I++ S +D I+ + + + H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFE------DIVAREYYSEADASHCIQQILESVNHCH---LN 122
Query: 492 RYVHGDLRPSNILLG---KNMEPHISDFGLA 519
VH DL+P N+LL K ++DFGLA
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 36/179 (20%)
Query: 421 RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAK 480
+HPNI++L+ + ++ + + G L I + + S + ++ + K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKI------LRQKFFSEREASAVLFTITK 127
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILL----GKNMEPHISDFGLARLADIAEETPEVHWEQS 536
+ +LH + VH DL+PSNIL G I DFG A+ ++ E
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK---------QLRAENG 175
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
TP +TA + APE + + DI+S GV+L M++G P
Sbjct: 176 LLMTPC------YTA--------NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 342 DTMSENMEQYEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIV----YKVALNNEEAVAVR 397
D +E +++ + + S D+++++ +G+ G V Y N AVA++
Sbjct: 365 DDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIK 424
Query: 398 RLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHG 456
N +E F EA + + HP+IV L + + +I + G L + +
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ- 482
Query: 457 KAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDF 516
+ L + + ++ +A+L KR+VH D+ N+L+ + DF
Sbjct: 483 ----VRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDF 535
Query: 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKW 576
GL+R + + +++ S P++ + APE+ R+ T
Sbjct: 536 GLSRYMEDS-----TYYKASKGKLPIK-----------------WMAPESINFRRFTSAS 573
Query: 577 DIYSYGVILLEMI 589
D++ +GV + E++
Sbjct: 574 DVWMFGVCMWEIL 586
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 11/166 (6%)
Query: 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI 420
D EQL L+GK G VY + E A+ + + + K F+ E A +
Sbjct: 29 DIPFEQLEIGE--LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 421 RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAK 480
RH N+V S +I +L + + A I+ L + +I + + K
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR-DAKIV----LDVNKTRQIAQEIVK 141
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526
G+ +LH K +H DL+ N+ N + I+DFGL ++ + +
Sbjct: 142 GMGYLH---AKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQ 183
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I FGLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DFGLAR H
Sbjct: 159 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----------HT 204
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE DI+S G I+ E+++G+
Sbjct: 205 DDEMTG---------------YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 114 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 166
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 167 XYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 591 -GKLP 594
G+ P
Sbjct: 210 YGQKP 214
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 45/286 (15%)
Query: 351 YEFVPLDSQVDFDLEQLLKASAFLLGKSTIGIVY----KVALNNEEAVAVRRL--GNGGW 404
YE VP S V F +E + G+ T VY ++ + EE +A++ L +
Sbjct: 13 YEAVPQLSNV-FKIEDKI-------GEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPI 64
Query: 405 QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYR 464
+ E Q A G+ N++ ++ F D ++ Y+ + S ++
Sbjct: 65 RIAAELQCLTVAGGQ---DNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-------- 113
Query: 465 PLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH-ISDFGLAR--- 520
LS+ + + + K + +H+ VH D++PSN L + ++ + + DFGLA+
Sbjct: 114 -LSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169
Query: 521 ------LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEA-SKVRKPT 573
L + E + Q+ L S + A + T ++APE +K T
Sbjct: 170 DTKIELLKFVQSEAQQERCSQNKCSICL--SRRQQVAPRAGTPG--FRAPEVLTKCPNQT 225
Query: 574 QKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPM 619
D++S GVI L ++SG+ P + S +L + I I R+ +
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYPFYK-ASDDLTALAQIMTIRGSRETI 270
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 40/177 (22%)
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
P + L + F ++D + +Y+ G L I + ++ + I G+
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GL 134
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTT---- 538
FL K ++ DL+ N++L I+DFG+ + E W+ TT
Sbjct: 135 FFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---------ENIWDGVTTKXFC 182
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
GTP Y APE + + D +++GV+L EM++G+ P
Sbjct: 183 GTPD------------------YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 114/298 (38%), Gaps = 57/298 (19%)
Query: 374 LLGKSTIG-IVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+LG G IVY+ +N + R L +E Q E+ HPN++ YF
Sbjct: 31 VLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESD---EHPNVIR---YF 84
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ EK + YI A + + L + + +++ G+A LH ++
Sbjct: 85 CT--EKDRQFQYIAIELCAATLQEYVEQKDFAHLGL-EPITLLQQTTSGLAHLHSLN--- 138
Query: 493 YVHGDLRPSNILLGK-----NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547
VH DL+P NIL+ ++ ISDFGL + L +
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCK--------------------KLAVGRH 178
Query: 548 EFTALNSTTSRSYYQAPE---ASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603
F+ + + APE PT DI+S G + +IS G P + +
Sbjct: 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA 238
Query: 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661
NI+ + D L P D+ + I + IA+D P KRPS +HV
Sbjct: 239 NILLGACSL--------DCLHPEKHEDVIARELIEKM--IAMD-----PQKRPSAKHV 281
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I D GLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I DF LAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 40/200 (20%)
Query: 407 FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPL 466
F+E + + G H N++ L +F D L+++ + GS+ + IH + R
Sbjct: 58 FREVEMLYQCQG---HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR------RHF 108
Query: 467 SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK--NMEP-HISDFGLARLAD 523
+ + +++ VA + FLH K H DL+P NIL + P I DF L
Sbjct: 109 NELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLG---- 161
Query: 524 IAEETPEVHWEQSTTGTPL--QSSPYEFTALNSTTSRSYYQAPE-----ASKVRKPTQKW 576
+G L SP L + + Y APE + + ++
Sbjct: 162 --------------SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207
Query: 577 DIYSYGVILLEMISGKLPMI 596
D++S GVIL ++SG P +
Sbjct: 208 DLWSLGVILYILLSGYPPFV 227
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 472 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 524
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 525 YYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
Query: 591 -GKLP 594
G+ P
Sbjct: 568 YGQKP 572
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I D GLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 390 NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449
+E VAV+ + G + Q E +RHPNIV + + +I +Y G
Sbjct: 44 TKELVAVKYIERGAAID-ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGE 102
Query: 450 LATAIHGKAGIISYRPLSWSDRLR-IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN 508
L I AG S D R + + G+++ H + + H DL+ N LL +
Sbjct: 103 LYERI-CNAGRFS------EDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGS 152
Query: 509 MEPH--ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEA 566
P I DFG ++ + + P +ST GTP Y APE
Sbjct: 153 PAPRLKICDFGYSK-SSVLHSQP-----KSTVGTPA------------------YIAPEV 188
Query: 567 SKVRKPTQK-WDIYSYGVILLEMISGKLP 594
++ K D++S GV L M+ G P
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 472 LRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531
+ ++ V+ G+ +L E + +VH DL N+LL ISDFGL++ A E
Sbjct: 473 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK----ALRADEN 525
Query: 532 HWEQSTTGT-PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590
+++ T G P++ + APE K + K D++S+GV++ E S
Sbjct: 526 YYKAQTHGKWPVK-----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
Query: 591 -GKLP 594
G+ P
Sbjct: 569 YGQKP 573
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 40/177 (22%)
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
P + L + F ++D + +Y+ G L I + ++ + I G+
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GL 455
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTT---- 538
FL K ++ DL+ N++L I+DFG+ + E W+ TT
Sbjct: 456 FFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---------ENIWDGVTTKXFC 503
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
GTP Y APE + + D +++GV+L EM++G+ P
Sbjct: 504 GTP------------------DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+I + +G+ ++H +H DL+PSN+ + ++ E I D GLAR H
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-----------HT 175
Query: 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGK 592
+ TG + +Y+APE Q DI+S G I+ E+++G+
Sbjct: 176 DDEMTG---------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 32/208 (15%)
Query: 383 VYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLI 441
+Y N AVA++ N +E F EA + + HP+IV L + + +I
Sbjct: 30 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII 88
Query: 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ G L + + + L + + ++ +A+L KR+VH D+
Sbjct: 89 MELCTLGELRSFLQ-----VRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAAR 140
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+L+ + DFGL+R + + +++ S P++ +
Sbjct: 141 NVLVSATDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIK-----------------W 178
Query: 562 QAPEASKVRKPTQKWDIYSYGVILLEMI 589
APE+ R+ T D++ +GV + E++
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 32/208 (15%)
Query: 383 VYKVALNNEEAVAVRRLGNGGWQRFKE-FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLI 441
+Y N AVA++ N +E F EA + + HP+IV L + + +I
Sbjct: 30 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII 88
Query: 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501
+ G L + + + L + + ++ +A+L KR+VH D+
Sbjct: 89 MELCTLGELRSFLQ-----VRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAAR 140
Query: 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY 561
N+L+ N + DFGL+R + + + S P++ +
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYMEDSTXX-----KASKGKLPIK-----------------W 178
Query: 562 QAPEASKVRKPTQKWDIYSYGVILLEMI 589
APE+ R+ T D++ +GV + E++
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE----ETPEVHWEQS 536
G+ ++H +H DL+P+N L+ ++ + DFGLAR D E + P E
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMIS 590
+ L +Y+APE +++ T+ D++S G I E+++
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRL---GNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+GK G V+ E+ VAV+ W R +TE +RH NI+ A
Sbjct: 45 IGKGRYGEVWMGKWRGEK-VAVKVFFTTEEASWFR----ETEIYQTVLMRHENILGFIAA 99
Query: 432 ----FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH- 486
S + LI DY NGSL + L L++ G+ LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSGLCHLHT 152
Query: 487 EVSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
E+ + H DL+ NIL+ KN I+D GLA +T EV +T
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VKFISDTNEVDIPPNTRVGTK 210
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588
+ P E L+ + +R+++Q+ + D+YS+G+IL E+
Sbjct: 211 RYMPPE--VLDESLNRNHFQSYIMA---------DMYSFGLILWEV 245
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 128/319 (40%), Gaps = 57/319 (17%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN---GGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+GK G V++ + E VAV+ + W R +TE +RH NI+ A
Sbjct: 45 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSWFR----ETELYNTVMLRHENILGFIA- 98
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDR---LRIIKGVAKGIAFLH-E 487
+ L T H + Y L+ D LRI+ +A G+A LH E
Sbjct: 99 -----SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 488 VSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
+ + H DL+ NIL+ KN + I+D GLA V QST +
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----------VMHSQSTNQLDVG 202
Query: 544 SSPYEFTALNSTTSRSYYQAPEA------SKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
++P T Y APE ++ DI+++G++L E+ M+
Sbjct: 203 NNPRVGT--------KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR---RMVS 251
Query: 598 IGSMELNIVQWIQLI-----LEDRKPM--TDILDPFLAHDLDKEDEIVSVLKIALDCVHK 650
G +E + ++ ED + + D P + + + + S+ K+ +C ++
Sbjct: 252 NGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQ 311
Query: 651 SPDKRPSMRHVCDSLDRVN 669
+P R + + +L +++
Sbjct: 312 NPSARLTALRIKKTLTKID 330
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 55/235 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI--RHPNIVSLRAYF 432
+GK G V++ EE VAV+ + + + + EAE + RH NI+ F
Sbjct: 37 IGKGRFGEVWRGKWRGEE-VAVKIFSS---REERSWFREAEIYQTVMLRHENILG----F 88
Query: 433 WSVDEK--------LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF 484
+ D K L+ DY +GSL ++ ++ +++ A G+A
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFD-------YLNRYTVTVEGMIKLALSTASGLAH 141
Query: 485 LH-EVSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
LH E+ + H DL+ NIL+ KN I+D GLA D A +T ++
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI-------- 193
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEA------SKVRKPTQKWDIYSYGVILLEM 588
A N Y APE K + ++ DIY+ G++ E+
Sbjct: 194 -----------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 55/235 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI--RHPNIVSLRAYF 432
+GK G V++ EE VAV+ + + + + EAE + RH NI+ F
Sbjct: 14 IGKGRFGEVWRGKWRGEE-VAVKIFSS---REERSWFREAEIYQTVMLRHENILG----F 65
Query: 433 WSVDEK--------LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF 484
+ D K L+ DY +GSL ++ ++ +++ A G+A
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFD-------YLNRYTVTVEGMIKLALSTASGLAH 118
Query: 485 LH-EVSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
LH E+ + H DL+ NIL+ KN I+D GLA D A +T ++
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI-------- 170
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEA------SKVRKPTQKWDIYSYGVILLEM 588
A N Y APE K + ++ DIY+ G++ E+
Sbjct: 171 -----------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 55/235 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI--RHPNIVSLRAYF 432
+GK G V++ EE VAV+ + + + + EAE + RH NI+ F
Sbjct: 50 IGKGRFGEVWRGKWRGEE-VAVKIFSS---REERSWFREAEIYQTVMLRHENILG----F 101
Query: 433 WSVDEK--------LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF 484
+ D K L+ DY +GSL ++ ++ +++ A G+A
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFD-------YLNRYTVTVEGMIKLALSTASGLAH 154
Query: 485 LH-EVSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
LH E+ + H DL+ NIL+ KN I+D GLA D A +T ++
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI-------- 206
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEA------SKVRKPTQKWDIYSYGVILLEM 588
A N Y APE K + ++ DIY+ G++ E+
Sbjct: 207 -----------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 55/235 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI--RHPNIVSLRAYF 432
+GK G V++ EE VAV+ + + + + EAE + RH NI+ F
Sbjct: 17 IGKGRFGEVWRGKWRGEE-VAVKIFSS---REERSWFREAEIYQTVMLRHENILG----F 68
Query: 433 WSVDEK--------LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF 484
+ D K L+ DY +GSL ++ ++ +++ A G+A
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFD-------YLNRYTVTVEGMIKLALSTASGLAH 121
Query: 485 LH-EVSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
LH E+ + H DL+ NIL+ KN I+D GLA D A +T ++
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI-------- 173
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEA------SKVRKPTQKWDIYSYGVILLEM 588
A N Y APE K + ++ DIY+ G++ E+
Sbjct: 174 -----------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 55/235 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI--RHPNIVSLRAYF 432
+GK G V++ EE VAV+ + + + + EAE + RH NI+ F
Sbjct: 11 IGKGRFGEVWRGKWRGEE-VAVKIFSS---REERSWFREAEIYQTVMLRHENILG----F 62
Query: 433 WSVDEK--------LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF 484
+ D K L+ DY +GSL ++ ++ +++ A G+A
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFD-------YLNRYTVTVEGMIKLALSTASGLAH 115
Query: 485 LH-EVSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
LH E+ + H DL+ NIL+ KN I+D GLA D A +T ++
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI-------- 167
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEA------SKVRKPTQKWDIYSYGVILLEM 588
A N Y APE K + ++ DIY+ G++ E+
Sbjct: 168 -----------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 45/193 (23%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
VAKG+AFL + K +H DL NILL I DFGLAR I ++ V +
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR--HIKNDSNYV--VKGN 229
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI---SGKLP 594
P++ + APE+ T + D++SYG+ L E+ S P
Sbjct: 230 ARLPVK-----------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 272
Query: 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK 654
+ + S ++ ++I E + ++ P +D+ K C P K
Sbjct: 273 GMPVDS------KFYKMIKEGFRMLSPEHAPAEMYDIMK------------TCWDADPLK 314
Query: 655 RPSMRHVCDSLDR 667
RP+ + + +++
Sbjct: 315 RPTFKQIVQLIEK 327
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 111/282 (39%), Gaps = 52/282 (18%)
Query: 390 NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS--VDEKLLIYDYIPN 447
N+ V V ++ + ++ ++F E + HPN++ + S LI + P
Sbjct: 34 NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPY 93
Query: 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK 507
GSL +H + + S ++ A+G AFLH + P L P + L +
Sbjct: 94 GSLYNVLHEGTNFV----VDQSQAVKFALDXARGXAFLHTLEP-------LIPRHALNSR 142
Query: 508 NMEPHISDFGLARL--ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPE 565
++ I + AR+ AD+ SP A + + PE
Sbjct: 143 SVX--IDEDXTARISXADVKFSF---------------QSPGRXYAPAWVAPEALQKKPE 185
Query: 566 ASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDP 625
+ R D +S+ V+L E+++ ++P + + E+ ++ LE +P + P
Sbjct: 186 DTNRRSA----DXWSFAVLLWELVTREVPFADLSNXEIG----XKVALEGLRPT---IPP 234
Query: 626 FLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667
++ + K +I C ++ P KRP + L++
Sbjct: 235 GISPHVSKLXKI---------CXNEDPAKRPKFDXIVPILEK 267
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 55/235 (23%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI--RHPNIVSLRAYF 432
+GK G V++ EE VAV+ + + + + EAE + RH NI+ F
Sbjct: 12 IGKGRFGEVWRGKWRGEE-VAVKIFSS---REERSWFREAEIYQTVMLRHENILG----F 63
Query: 433 WSVDEK--------LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF 484
+ D K L+ DY +GSL ++ ++ +++ A G+A
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFD-------YLNRYTVTVEGMIKLALSTASGLAH 116
Query: 485 LH-EVSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
LH E+ + H DL+ NIL+ KN I+D GLA D A +T ++
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI-------- 168
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEA------SKVRKPTQKWDIYSYGVILLEM 588
A N Y APE K + ++ DIY+ G++ E+
Sbjct: 169 -----------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 53/236 (22%)
Query: 374 LLGKSTIGIVYKVALNNEEA----VAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLR 429
+ G+ T G V L E++ VA++++ R +E Q + + + HPNIV L+
Sbjct: 30 MAGQGTFGTV---QLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQ 85
Query: 430 AYFWSVDEKL-------LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK----GV 478
+YF+++ E+ ++ +Y+P+ + ++ P+ +IK +
Sbjct: 86 SYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPI-------LIKVFLFQL 138
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLADIAEETPEVHWEQST 537
+ I LH + H D++P N+L+ + + + DFG A+ ++ P V +
Sbjct: 139 IRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK--KLSPSEPNVAY---- 191
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPE-ASKVRKPTQKWDIYSYGVILLEMISGK 592
SR YY+APE + T DI+S G I EM+ G+
Sbjct: 192 -----------------ICSR-YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 47/231 (20%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN---GGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+GK G V++ + E VAV+ + W R +TE +RH NI+ A
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSWFR----ETELYNTVMLRHENILGFIA- 69
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDR---LRIIKGVAKGIAFLH-E 487
+ L T H + Y L+ D LRI+ +A G+A LH E
Sbjct: 70 -----SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 488 VSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
+ + H DL+ NIL+ KN + I+D GLA V QST +
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----------VMHSQSTNQLDVG 173
Query: 544 SSPYEFTALNSTTSRSYYQAPEA------SKVRKPTQKWDIYSYGVILLEM 588
++P T Y APE ++ DI+++G++L E+
Sbjct: 174 NNPRVGT--------KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 47/231 (20%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGN---GGWQRFKEFQTEAEAIGKIRHPNIVSLRAY 431
+GK G V++ + E VAV+ + W R +TE +RH NI+ A
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSWFR----ETELYNTVMLRHENILGFIA- 69
Query: 432 FWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDR---LRIIKGVAKGIAFLH-E 487
+ L T H + Y L+ D LRI+ +A G+A LH E
Sbjct: 70 -----SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 488 VSPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543
+ + H DL+ NIL+ KN + I+D GLA V QST +
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----------VMHSQSTNQLDVG 173
Query: 544 SSPYEFTALNSTTSRSYYQAPEA------SKVRKPTQKWDIYSYGVILLEM 588
++P T Y APE ++ DI+++G++L E+
Sbjct: 174 NNPRVGT--------KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 375 LGKSTIGIVYK-VALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW 433
LG+ GIV++ V ++++ + + G + + E + RH NI+ L F
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHESFE 71
Query: 434 SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493
S++E ++I+++I + I+ A ++ R + + + V + + FLH
Sbjct: 72 SMEELVMIFEFISGLDIFERINTSAFELNEREI-----VSYVHQVCEALQFLH---SHNI 123
Query: 494 VHGDLRPSNILLGKNMEPHIS--DFGLAR 520
H D+RP NI+ I +FG AR
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQAR 152
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 95/230 (41%), Gaps = 45/230 (19%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRHPNIVSLRAYFW 433
+GK G V++ L + E+VAV+ + Q F+E TE +RH NI+ A
Sbjct: 16 VGKGRYGEVWR-GLWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 434 ----SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH-EV 488
S + LI Y +GSL + + L LR+ A G+A LH E+
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLY-------DFLQRQTLEPHLALRLAVSAACGLAHLHVEI 125
Query: 489 SPKR----YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQS 544
+ H D + N+L+ N++ I+D GLA + Q
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHS-------------------QG 166
Query: 545 SPYEFTALNSTTSRSYYQAPEA--SKVRK---PTQKW-DIYSYGVILLEM 588
S Y N Y APE ++R + KW DI+++G++L E+
Sbjct: 167 SDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+++ +G+ FLH VH DL+P NIL+ ++DFGLAR+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI------------ 161
Query: 534 EQSTTGTPLQSSPYEF-TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
Y + AL+ +Y+APE D++S G I EM K
Sbjct: 162 -------------YSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 28/186 (15%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F E + + P +V L F ++ +Y+P G L + P W+
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWA 175
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
R A+ + L + ++H D++P N+LL K+ ++DFG +
Sbjct: 176 ---RFY--TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC----MKMNKE 226
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ + GTP SP L S YY ++ D +S GV L EM+
Sbjct: 227 GMVRCDTAVGTPDYISP---EVLKSQGGDGYY-----------GRECDWWSVGVFLYEML 272
Query: 590 SGKLPM 595
G P
Sbjct: 273 VGDTPF 278
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 49/242 (20%)
Query: 363 DLEQLLKASAFLLGKSTIGIVYKVALNNE-EAVAVRRLG-NGGWQRFKEFQTEAEAIGKI 420
DLE L + +G T G V+K+ +AV+++ +G + K + + + K
Sbjct: 26 DLENLGE-----MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS 80
Query: 421 RH-PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGK-AGIISYRPLSWSDRLRIIKGV 478
P IV F + + + + + G+ A + + G I R L ++ +
Sbjct: 81 HDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILG-----KMTVAI 133
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA-RLADIAEETPEVHWEQST 537
K + +L E +H D++PSNILL + + + DFG++ RL D
Sbjct: 134 VKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK------------ 179
Query: 538 TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQ-----KWDIYSYGVILLEMISGK 592
A + + + Y APE PT+ + D++S G+ L+E+ +G+
Sbjct: 180 -------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
Query: 593 LP 594
P
Sbjct: 227 FP 228
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 38/179 (21%)
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLR-IIKGV 478
+RHPNIV + + ++ +Y G L I AG S D R + +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFS------EDEARFFFQQL 123
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH--ISDFGLARLADIAEETPEVHWEQS 536
G+++ H + + H DL+ N LL + P I DFG ++ + + P +S
Sbjct: 124 ISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQP-----KS 174
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK-WDIYSYGVILLEMISGKLP 594
T GTP Y APE ++ K D++S GV L M+ G P
Sbjct: 175 TVGTPA------------------YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 28/186 (15%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F E + + P +V L F ++ +Y+P G L + P W+
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWA 175
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
R A+ + L + ++H D++P N+LL K+ ++DFG +
Sbjct: 176 ---RFY--TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC----MKMNKE 226
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ + GTP SP L S YY ++ D +S GV L EM+
Sbjct: 227 GMVRCDTAVGTPDYISP---EVLKSQGGDGYY-----------GRECDWWSVGVFLYEML 272
Query: 590 SGKLPM 595
G P
Sbjct: 273 VGDTPF 278
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 35/159 (22%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L+I + + G L + I + + + + I++ + I FLH H D+
Sbjct: 102 LIIMECMEGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDV 154
Query: 499 RPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L K+ ++DFG A+ TT LQ+ Y
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAK---------------ETTQNALQTPCY-------- 191
Query: 556 TSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
YY APE K + D++S GVI+ ++ G P
Sbjct: 192 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 28/186 (15%)
Query: 410 FQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
F E + + P +V L F ++ +Y+P G L + P W+
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWA 170
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
R A+ + L + ++H D++P N+LL K+ ++DFG +
Sbjct: 171 ---RFY--TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC----MKMNKE 221
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ + GTP SP L S YY ++ D +S GV L EM+
Sbjct: 222 GMVRCDTAVGTPDYISP---EVLKSQGGDGYY-----------GRECDWWSVGVFLYEML 267
Query: 590 SGKLPM 595
G P
Sbjct: 268 VGDTPF 273
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 35/159 (22%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L+I + + G L + I + + + + I++ + I FLH H D+
Sbjct: 83 LIIMECMEGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDV 135
Query: 499 RPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L K+ ++DFG A+ TT LQ+ Y
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAK---------------ETTQNALQTPCYT------- 173
Query: 556 TSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
YY APE K + D++S GVI+ ++ G P
Sbjct: 174 ---PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 36/179 (20%)
Query: 421 RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAK 480
+HPNI++L+ + ++ + G L I + + S + ++ + K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKI------LRQKFFSEREASAVLFTITK 127
Query: 481 GIAFLHEVSPKRYVHGDLRPSNILL----GKNMEPHISDFGLARLADIAEETPEVHWEQS 536
+ +LH + VH DL+PSNIL G I DFG A+ ++ E
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK---------QLRAENG 175
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
TP +TA + APE + + DI+S GV+L ++G P
Sbjct: 176 LLXTPC------YTA--------NFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 38/179 (21%)
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLR-IIKGV 478
+RHPNIV + + ++ +Y G L I AG S D R + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFS------EDEARFFFQQL 124
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH--ISDFGLARLADIAEETPEVHWEQS 536
G+++ H + + H DL+ N LL + P I DFG ++ + + P +S
Sbjct: 125 ISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQP-----KS 175
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK-WDIYSYGVILLEMISGKLP 594
T GTP Y APE ++ K D++S GV L M+ G P
Sbjct: 176 TVGTPA------------------YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 411 QTEAEAIGKIRH-PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
+TE + + IR P +V+L F + + LI DYI G L T + S R
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-------SQRERFTE 158
Query: 470 DRLRIIKG-VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528
++I G + + LH++ ++ D++ NILL N ++DFGL++ +A+ET
Sbjct: 159 HEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADET 214
Query: 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP--TQKWDIYSYGVILL 586
Y+F Y AP+ + + D +S GV++
Sbjct: 215 ---------------ERAYDFCGTIE------YMAPDIVRGGDSGHDKAVDWWSLGVLMY 253
Query: 587 EMISGKLPMIQIGS 600
E+++G P G
Sbjct: 254 ELLTGASPFTVDGE 267
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 97 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 149
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 182
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 183 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 54/282 (19%)
Query: 390 NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449
+E V ++ L + F A + K+ H ++V + DE +L+ +++ GS
Sbjct: 39 HETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGS 98
Query: 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM 509
L T + I+ + W +L + K +A + FL E + +HG++ NILL +
Sbjct: 99 LDTYLKKNKNCIN---ILW--KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREE 150
Query: 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV 569
+ + +L+D G + P + R + PE +
Sbjct: 151 DRKTGNPPFIKLSD--------------PGISITVLPKDI-----LQERIPWVPPECIEN 191
Query: 570 RK----PTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILD 624
K T KW S+G L E+ S G P+ + S Q EDR +
Sbjct: 192 PKNLNLATDKW---SFGTTLWEICSGGDKPLSALDS------QRKLQFYEDRHQLP---- 238
Query: 625 PFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666
K E+ +++ +C+ PD RPS R + L+
Sbjct: 239 ------APKAAELANLIN---NCMDYEPDHRPSFRAIIRDLN 271
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 105 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 157
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 190
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 191 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 29/120 (24%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+++ +G+ FLH VH DL+P NIL+ ++DFGLAR+
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI------------ 169
Query: 534 EQSTTGTPLQSSPYEF-TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
Y + AL +Y+APE D++S G I EM K
Sbjct: 170 -------------YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 91 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 176
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 177 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 95 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 147
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 180
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 181 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 96 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 148
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 181
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 182 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 135 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 187
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 220
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 90 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 142
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 175
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 176 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 89 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 174
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 175 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 141 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 193
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 194 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 226
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 227 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 33/191 (17%)
Query: 411 QTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
QTE + HP +V L + F + + +Y+ G L + + + +S
Sbjct: 100 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 159
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ + + +LHE + ++ DL+ N+LL ++D+G+ + +T
Sbjct: 160 AEISL------ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 210
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
+ GTP Y APE + D ++ GV++ EM+
Sbjct: 211 -----STFCGTP------------------NYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 590 SGKLPMIQIGS 600
+G+ P +GS
Sbjct: 248 AGRSPFDIVGS 258
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 38/179 (21%)
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLR-IIKGV 478
+RHPNIV + + ++ +Y G L I AG S D R + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFS------EDEARFFFQQL 124
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH--ISDFGLARLADIAEETPEVHWEQS 536
G+++ H + + H DL+ N LL + P I+DFG ++ A + P +S
Sbjct: 125 ISGVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK-ASVLHSQP-----KS 175
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK-WDIYSYGVILLEMISGKLP 594
GTP Y APE ++ K D++S GV L M+ G P
Sbjct: 176 AVGTPA------------------YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 91 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 176
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T+ YY APE K + D++S GVI+ ++ G P
Sbjct: 177 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ K + FLH + H DL+P NIL + SD+ A P++ ++ T
Sbjct: 127 ICKSVNFLH---SNKLTHTDLKPENILFVQ------SDYTEAY-------NPKIKRDERT 170
Query: 538 TGTP------LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
P S+ Y+ ++ S +Y+APE +Q D++S G IL+E G
Sbjct: 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 41/218 (18%)
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
P IV + F + D+ I D + G L + + G+ S + + A+ I
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFY--------AAEII 301
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
L + + V+ DL+P+NILL ++ ISD GLA D +++ P H T G
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKP--HASVGTHG--- 354
Query: 543 QSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601
Y APE K D +S G +L +++ G P Q +
Sbjct: 355 ------------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 396
Query: 602 ELNIVQWIQLILEDRKP------MTDILDPFLAHDLDK 633
+ + + + L + P + +L+ L D+++
Sbjct: 397 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNR 434
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 108/282 (38%), Gaps = 54/282 (19%)
Query: 390 NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449
+E V ++ L + F A + K+ H ++V DE +L+ +++ GS
Sbjct: 39 HETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGS 98
Query: 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM 509
L T + I+ + W +L + K +A + FL E + +HG++ NILL +
Sbjct: 99 LDTYLKKNKNCIN---ILW--KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREE 150
Query: 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV 569
+ + +L+D G + P + R + PE +
Sbjct: 151 DRKTGNPPFIKLSD--------------PGISITVLPKDI-----LQERIPWVPPECIEN 191
Query: 570 RK----PTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILD 624
K T KW S+G L E+ S G P+ + S Q EDR +
Sbjct: 192 PKNLNLATDKW---SFGTTLWEICSGGDKPLSALDS------QRKLQFYEDRHQLP---- 238
Query: 625 PFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666
K E+ +++ +C+ PD RPS R + L+
Sbjct: 239 ------APKAAELANLIN---NCMDYEPDHRPSFRAIIRDLN 271
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 41/218 (18%)
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
P IV + F + D+ I D + G L + + G+ S + + A+ I
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFY--------AAEII 302
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
L + + V+ DL+P+NILL ++ ISD GLA D +++ P H T G
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKP--HASVGTHG--- 355
Query: 543 QSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601
Y APE K D +S G +L +++ G P Q +
Sbjct: 356 ------------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 602 ELNIVQWIQLILEDRKP------MTDILDPFLAHDLDK 633
+ + + + L + P + +L+ L D+++
Sbjct: 398 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNR 435
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 41/218 (18%)
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
P IV + F + D+ I D + G L + + G+ S + + A+ I
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFY--------AAEII 302
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
L + + V+ DL+P+NILL ++ ISD GLA D +++ P H T G
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKP--HASVGTHG--- 355
Query: 543 QSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601
Y APE K D +S G +L +++ G P Q +
Sbjct: 356 ------------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 602 ELNIVQWIQLILEDRKP------MTDILDPFLAHDLDK 633
+ + + + L + P + +L+ L D+++
Sbjct: 398 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNR 435
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 41/218 (18%)
Query: 423 PNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI 482
P IV + F + D+ I D + G L + + G+ S + + A+ I
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFY--------AAEII 302
Query: 483 AFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPL 542
L + + V+ DL+P+NILL ++ ISD GLA D +++ P H T G
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKP--HASVGTHG--- 355
Query: 543 QSSPYEFTALNSTTSRSYYQAPEA-SKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601
Y APE K D +S G +L +++ G P Q +
Sbjct: 356 ------------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 602 ELNIVQWIQLILEDRKP------MTDILDPFLAHDLDK 633
+ + + + L + P + +L+ L D+++
Sbjct: 398 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNR 435
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 40/162 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I+K + + I +LH ++ H D+
Sbjct: 89 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 174
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
T YY APE K + D++S GVI+ ++ G P
Sbjct: 175 TEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 29/120 (24%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+++ +G+ FLH VH DL+P NIL+ ++DFGLAR+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI------------ 161
Query: 534 EQSTTGTPLQSSPYEF-TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
Y + AL +Y+APE D++S G I EM K
Sbjct: 162 -------------YSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 33/191 (17%)
Query: 411 QTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
QTE + HP +V L + F + + +Y+ G L + + + +S
Sbjct: 68 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 127
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ + + +LHE + ++ DL+ N+LL ++D+G+ + +T
Sbjct: 128 AEISL------ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 178
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
GTP Y APE + D ++ GV++ EM+
Sbjct: 179 SXF-----CGTP------------------NYIAPEILRGEDYGFSVDWWALGVLMFEMM 215
Query: 590 SGKLPMIQIGS 600
+G+ P +GS
Sbjct: 216 AGRSPFDIVGS 226
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 392 EAVAVRR--LGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449
E V VRR L + Q E HPNIV RA F + +E ++ ++ GS
Sbjct: 37 EYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS 96
Query: 450 LATAI--HGKAGI----ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI 503
I H G+ I+Y I++GV K + ++H + YVH ++ S+I
Sbjct: 97 AKDLICTHFMDGMNELAIAY----------ILQGVLKALDYIHHMG---YVHRSVKASHI 143
Query: 504 LLGKNMEPHIS 514
L+ + + ++S
Sbjct: 144 LISVDGKVYLS 154
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLG-KNMEP-HISDFGLARLADIAEETPE-VHWEQSTT 538
+ ++HE YVHGD++ SN+LL KN + ++ D+GLA PE VH E
Sbjct: 165 LEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLA-----YRYCPEGVHKEYKED 216
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
EFT++++ + P+++ D+ G +++ ++G LP
Sbjct: 217 PKRCHDGTIEFTSIDAHNGVA------------PSRRGDLEILGYCMIQWLTGHLP 260
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 392 EAVAVRR--LGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449
E V VRR L + Q E HPNIV RA F + +E ++ ++ GS
Sbjct: 53 EYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS 112
Query: 450 LATAI--HGKAGI----ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI 503
I H G+ I+Y I++GV K + ++H + YVH ++ S+I
Sbjct: 113 AKDLICTHFMDGMNELAIAY----------ILQGVLKALDYIHHMG---YVHRSVKASHI 159
Query: 504 LLGKNMEPHIS 514
L+ + + ++S
Sbjct: 160 LISVDGKVYLS 170
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLG-KNMEP-HISDFGLARLADIAEETPE-VHWEQSTT 538
+ ++HE YVHGD++ SN+LL KN + ++ D+GLA PE VH E
Sbjct: 165 LEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLA-----YRYCPEGVHKEYKED 216
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
EFT++++ + P+++ D+ G +++ ++G LP
Sbjct: 217 PKRCHDGTIEFTSIDAHNGVA------------PSRRGDLEILGYCMIQWLTGHLP 260
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 33/191 (17%)
Query: 411 QTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
QTE + HP +V L + F + + +Y+ G L + + + +S
Sbjct: 53 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 112
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ + + +LHE + ++ DL+ N+LL ++D+G+ + +T
Sbjct: 113 AEISL------ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 163
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
GTP Y APE + D ++ GV++ EM+
Sbjct: 164 -----SXFCGTP------------------NYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
Query: 590 SGKLPMIQIGS 600
+G+ P +GS
Sbjct: 201 AGRSPFDIVGS 211
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 33/191 (17%)
Query: 411 QTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWS 469
QTE + HP +V L + F + + +Y+ G L + + + +S
Sbjct: 57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 116
Query: 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529
+ + + +LHE + ++ DL+ N+LL ++D+G+ + +T
Sbjct: 117 AEISL------ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 167
Query: 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589
GTP Y APE + D ++ GV++ EM+
Sbjct: 168 -----SXFCGTP------------------NYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 590 SGKLPMIQIGS 600
+G+ P +GS
Sbjct: 205 AGRSPFDIVGS 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 29/120 (24%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
+++ +G+ FLH VH DL+P NIL+ ++DFGLAR+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI------------ 161
Query: 534 EQSTTGTPLQSSPYEF-TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
Y + AL +Y+APE D++S G I EM K
Sbjct: 162 -------------YSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 62 LDRAELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ NNL+ L + N +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLE 172
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 173 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 62 LDRAELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ NNL+ L + N +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLE 172
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 173 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 62 LDRAELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ NNL+ L + N +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLE 172
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 173 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ K + FLH + H DL+P NIL + SD+ A P++ ++ T
Sbjct: 127 ICKSVNFLH---SNKLTHTDLKPENILFVQ------SDYTEAY-------NPKIKRDERT 170
Query: 538 TGTP------LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
P S+ Y+ ++ +Y+APE +Q D++S G IL+E G
Sbjct: 171 LINPDIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 63 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 114
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ NNL+ L + N +
Sbjct: 115 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLE 173
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 174 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 210
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ NNL+ L + N +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLE 172
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 173 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 47/220 (21%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI--HGKAGIISYRP 465
++ + EA ++HP+IV L + S ++++++ L I AG + Y
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSE 131
Query: 466 LSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG--KNMEP-HISDFGLARLA 522
S +R I + + + H+ +H D++P +LL +N P + FG+A
Sbjct: 132 AVASHYMRQI---LEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--I 183
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK-WDIYSY 581
+ E GTP ++ APE K R+P K D++
Sbjct: 184 QLGESGLVA---GGRVGTP------------------HFMAPEVVK-REPYGKPVDVWGC 221
Query: 582 GVILLEMISGKLPM----------IQIGSMELNIVQWIQL 611
GVIL ++SG LP I G ++N QW +
Sbjct: 222 GVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 261
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 47/220 (21%)
Query: 408 KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAI--HGKAGIISYRP 465
++ + EA ++HP+IV L + S ++++++ L I AG + Y
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSE 129
Query: 466 LSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG--KNMEP-HISDFGLARLA 522
S +R I + + + H+ +H D++P +LL +N P + FG+A
Sbjct: 130 AVASHYMRQI---LEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--I 181
Query: 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK-WDIYSY 581
+ E GTP ++ APE K R+P K D++
Sbjct: 182 QLGESGLVA---GGRVGTP------------------HFMAPEVVK-REPYGKPVDVWGC 219
Query: 582 GVILLEMISGKLPM----------IQIGSMELNIVQWIQL 611
GVIL ++SG LP I G ++N QW +
Sbjct: 220 GVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 259
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 154 RLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPND------IANLSRLRLL 207
L+ + LN N + LP G ++LTAL+ L L+ N L+ L ND I ++SR +LL
Sbjct: 481 HLQVLYLNHN-YLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLL 539
Query: 208 AQR--VYVDLTYNNLSGLIPQNAALLSLGPTAFIG-----NPFLCGPPLKVSC 253
A V+V L+ + I N + + FI N + GPP + C
Sbjct: 540 APNPDVFVSLSVLD----ITHNKFICECELSTFINWLNHTNVTIAGPPADIYC 588
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 455 HGKAGIIS--YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512
H AG++S + S+ R+++ + G+ ++H + +H D++ +N+L+ ++
Sbjct: 109 HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLK 165
Query: 513 ISDFGLARLADIAEET 528
++DFGLAR +A+ +
Sbjct: 166 LADFGLARAFSLAKNS 181
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLG-KNMEP-HISDFGLARLADIAEETPE-VHWEQSTT 538
+ ++HE YVHGD++ SN+LL KN + ++ D+GLA PE VH +
Sbjct: 165 LEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLA-----YRYCPEGVHKAYAAD 216
Query: 539 GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594
EFT++++ + P+++ D+ G +++ ++G LP
Sbjct: 217 PKRCHDGTIEFTSIDAHNGVA------------PSRRGDLEILGYCMIQWLTGHLP 260
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 455 HGKAGIIS--YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512
H AG++S + S+ R+++ + G+ ++H + +H D++ +N+L+ ++
Sbjct: 109 HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLK 165
Query: 513 ISDFGLARLADIAEET 528
++DFGLAR +A+ +
Sbjct: 166 LADFGLARAFSLAKNS 181
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 455 HGKAGIIS--YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512
H AG++S + S+ R+++ + G+ ++H + +H D++ +N+L+ ++
Sbjct: 109 HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLK 165
Query: 513 ISDFGLARLADIAEET 528
++DFGLAR +A+ +
Sbjct: 166 LADFGLARAFSLAKNS 181
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 455 HGKAGIIS--YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512
H AG++S + S+ R+++ + G+ ++H + +H D++ +N+L+ ++
Sbjct: 108 HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLK 164
Query: 513 ISDFGLARLADIAEET 528
++DFGLAR +A+ +
Sbjct: 165 LADFGLARAFSLAKNS 180
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 40/280 (14%)
Query: 383 VYKVALNNEEAVAVR--RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-DEKL 439
V++V ++ A++ L Q ++ E + K++ + +R Y + + D+ +
Sbjct: 28 VFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 87
Query: 440 LIYDYIPNGSLATAIHGKAGIISY-RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
+ N L + + K I + R W + L + H + VH DL
Sbjct: 88 YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----------HTIHQHGIVHSDL 137
Query: 499 RPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSR 558
+P+N L+ M I DFG+A + +T V + S GT P ++S+
Sbjct: 138 KPANFLIVDGMLKLI-DFGIAN--QMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSREN 193
Query: 559 SYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKP 618
K + K D++S G IL M GK P QI +N + + I++ P
Sbjct: 194 -------GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI----INQISKLHAIID---P 239
Query: 619 MTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658
+I P + E ++ VLK C+ + P +R S+
Sbjct: 240 NHEIEFPDIP-----EKDLQDVLKC---CLKRDPKQRISI 271
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 28/109 (25%)
Query: 485 LHEVSPKRYVHGDLRPSNILLGKNMEPHIS--DFGLARLADIAEETPEVHWEQSTTGTPL 542
L + R +H DL+P NILL + I DFG
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG------------------------- 247
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
SS YE + + +Y+APE + D++S G IL E+++G
Sbjct: 248 -SSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 98/263 (37%), Gaps = 59/263 (22%)
Query: 412 TEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHG----KAGIISYRPLS 467
E + + K+ IVSL F + + L+ + G + I+ G R +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527
++ + + G+ LH+ + ++ DL+P N+LL + ISD GLA
Sbjct: 294 YTAQ------IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA-------- 336
Query: 528 TPEVHWEQSTT----GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E+ Q+ T GTP + APE + D ++ GV
Sbjct: 337 -VELKAGQTKTKGYAGTP------------------GFMAPELLLGEEYDFSVDYFALGV 377
Query: 584 ILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKI 643
L EMI+ + P G N + Q +LE D P +D ++L+
Sbjct: 378 TLYEMIAARGPFRARGEKVEN-KELKQRVLEQAVTYPDKFSP------ASKDFCEALLQ- 429
Query: 644 ALDCVHKSPDKRPSMRH-VCDSL 665
K P+KR R CD L
Sbjct: 430 ------KDPEKRLGFRDGSCDGL 446
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 67/167 (40%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ N+L+ L + N +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLE 172
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 173 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 95/263 (36%), Gaps = 59/263 (22%)
Query: 412 TEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHG----KAGIISYRPLS 467
E + + K+ IVSL F + + L+ + G + I+ G R +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527
++ + + G+ LH+ + ++ DL+P N+LL + ISD GLA
Sbjct: 294 YTAQ------IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA-------- 336
Query: 528 TPEVHWEQSTT----GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E+ Q+ T GTP + APE + D ++ GV
Sbjct: 337 -VELKAGQTKTKGYAGTP------------------GFMAPELLLGEEYDFSVDYFALGV 377
Query: 584 ILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKI 643
L EMI+ + P G N + Q +LE D P + L
Sbjct: 378 TLYEMIAARGPFRARGEKVEN-KELKQRVLEQAVTYPDKFSP-------ASKDFCEAL-- 427
Query: 644 ALDCVHKSPDKRPSMRH-VCDSL 665
+ K P+KR R CD L
Sbjct: 428 ----LQKDPEKRLGFRDGSCDGL 446
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 38/268 (14%)
Query: 393 AVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-DEKLLIYDYIPNGSLA 451
A+ L Q ++ E + K++ + +R Y + + D+ + + N L
Sbjct: 37 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLN 96
Query: 452 TAIHGKAGIISY-RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME 510
+ + K I + R W + L + H + VH DL+P+N L+ M
Sbjct: 97 SWLKKKKSIDPWERKSYWKNMLEAV----------HTIHQHGIVHSDLKPANFLIVDGML 146
Query: 511 PHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR 570
I DFG+A + +T V + S GT P ++S+
Sbjct: 147 KLI-DFGIAN--QMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSREN-------GKSKS 195
Query: 571 KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHD 630
K + K D++S G IL M GK P QI +N + + I++ P +I P +
Sbjct: 196 KISPKSDVWSLGCILYYMTYGKTPFQQI----INQISKLHAIID---PNHEIEFPDIP-- 246
Query: 631 LDKEDEIVSVLKIALDCVHKSPDKRPSM 658
E ++ VLK C+ + P +R S+
Sbjct: 247 ---EKDLQDVLKC---CLKRDPKQRISI 268
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 98/263 (37%), Gaps = 59/263 (22%)
Query: 412 TEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHG----KAGIISYRPLS 467
E + + K+ IVSL F + + L+ + G + I+ G R +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527
++ + + G+ LH+ + ++ DL+P N+LL + ISD GLA
Sbjct: 294 YTAQ------IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA-------- 336
Query: 528 TPEVHWEQSTT----GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E+ Q+ T GTP + APE + D ++ GV
Sbjct: 337 -VELKAGQTKTKGYAGTP------------------GFMAPELLLGEEYDFSVDYFALGV 377
Query: 584 ILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKI 643
L EMI+ + P G N + Q +LE D P +D ++L+
Sbjct: 378 TLYEMIAARGPFRARGEKVEN-KELKQRVLEQAVTYPDKFSP------ASKDFCEALLQ- 429
Query: 644 ALDCVHKSPDKRPSMRH-VCDSL 665
K P+KR R CD L
Sbjct: 430 ------KDPEKRLGFRDGSCDGL 446
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 40/288 (13%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVR--RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+G V++V ++ A++ L Q ++ E + K++ + +R Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 433 WSV-DEKLLIYDYIPNGSLATAIHGKAGIISY-RPLSWSDRLRIIKGVAKGIAFLHEVSP 490
+ + D+ + + N L + + K I + R W + L + H +
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----------HTIHQ 173
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
VH DL+P+N L+ M I DFG+A + +T V + S GT P
Sbjct: 174 HGIVHSDLKPANFLIVDGMLKLI-DFGIAN--QMQPDTTSV-VKDSQVGTVNYMPPEAIK 229
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
++S+ K + K D++S G IL M GK P QI +N + +
Sbjct: 230 DMSSSREN-------GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI----INQISKLH 278
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658
I++ P +I P + E ++ VLK C+ + P +R S+
Sbjct: 279 AIID---PNHEIEFPDIP-----EKDLQDVLKC---CLKRDPKQRISI 315
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 95/263 (36%), Gaps = 59/263 (22%)
Query: 412 TEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHG----KAGIISYRPLS 467
E + + K+ IVSL F + + L+ + G + I+ G R +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527
++ + + G+ LH+ + ++ DL+P N+LL + ISD GLA
Sbjct: 294 YTAQ------IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA-------- 336
Query: 528 TPEVHWEQSTT----GTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGV 583
E+ Q+ T GTP + APE + D ++ GV
Sbjct: 337 -VELKAGQTKTKGYAGTP------------------GFMAPELLLGEEYDFSVDYFALGV 377
Query: 584 ILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKI 643
L EMI+ + P G N + Q +LE D P + L
Sbjct: 378 TLYEMIAARGPFRARGEKVEN-KELKQRVLEQAVTYPDKFSP-------ASKDFCEAL-- 427
Query: 644 ALDCVHKSPDKRPSMRH-VCDSL 665
+ K P+KR R CD L
Sbjct: 428 ----LQKDPEKRLGFRDGSCDGL 446
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 40/280 (14%)
Query: 383 VYKVALNNEEAVAVR--RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-DEKL 439
V++V ++ A++ L Q ++ E + K++ + +R Y + + D+ +
Sbjct: 24 VFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 83
Query: 440 LIYDYIPNGSLATAIHGKAGIISY-RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
+ N L + + K I + R W + L + H + VH DL
Sbjct: 84 YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----------HTIHQHGIVHSDL 133
Query: 499 RPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSR 558
+P+N L+ M I DFG+A + +T V + S GT P ++S+
Sbjct: 134 KPANFLIVDGMLKLI-DFGIAN--QMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSREN 189
Query: 559 SYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKP 618
K + K D++S G IL M GK P QI +N + + I++ P
Sbjct: 190 -------GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI----INQISKLHAIID---P 235
Query: 619 MTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658
+I P + E ++ VLK C+ + P +R S+
Sbjct: 236 NHEIEFPDIP-----EKDLQDVLKC---CLKRDPKQRISI 267
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 40/288 (13%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVR--RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+G V++V ++ A++ L Q ++ E + K++ + +R Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 433 WSV-DEKLLIYDYIPNGSLATAIHGKAGIISY-RPLSWSDRLRIIKGVAKGIAFLHEVSP 490
+ + D+ + + N L + + K I + R W + L + H +
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----------HTIHQ 173
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
VH DL+P+N L+ M I DFG+A + +T V + S GT P
Sbjct: 174 HGIVHSDLKPANFLIVDGMLKLI-DFGIAN--QMQPDTTSV-VKDSQVGTVNYMPPEAIK 229
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
++S+ K + K D++S G IL M GK P QI +N + +
Sbjct: 230 DMSSSREN-------GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI----INQISKLH 278
Query: 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658
I++ P +I P + E ++ VLK C+ + P +R S+
Sbjct: 279 AIID---PNHEIEFPDIP-----EKDLQDVLKC---CLKRDPKQRISI 315
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 38/179 (21%)
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLR-IIKGV 478
+RHPNIV + + ++ +Y G L I AG S D R + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFS------EDEARFFFQQL 124
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH--ISDFGLARLADIAEETPEVHWEQS 536
G+++ H + + H DL+ N LL + P I FG ++ + + P +S
Sbjct: 125 ISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQP-----KS 175
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK-WDIYSYGVILLEMISGKLP 594
T GTP Y APE ++ K D++S GV L M+ G P
Sbjct: 176 TVGTPA------------------YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 28/109 (25%)
Query: 485 LHEVSPKRYVHGDLRPSNILLGKNMEPHIS--DFGLARLADIAEETPEVHWEQSTTGTPL 542
L + R +H DL+P NILL + I DFG
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG------------------------- 247
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
SS YE + + +Y+APE + D++S G IL E+++G
Sbjct: 248 -SSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 22/120 (18%)
Query: 492 RYVHGDLRPSNILLGKNMEPHISDFGLA-RLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
+ +H D++PSNILL ++ + DFG++ +L D +T + G +P
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD-------AGCRPYMAP---E 195
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610
++ + SR Y + D++S G+ L E+ +G+ P + S+ + Q ++
Sbjct: 196 RIDPSASRQGYDV-----------RSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 40/280 (14%)
Query: 383 VYKVALNNEEAVAVR--RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-DEKL 439
V++V ++ A++ L Q ++ E + K++ + +R Y + + D+ +
Sbjct: 44 VFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103
Query: 440 LIYDYIPNGSLATAIHGKAGIISY-RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
+ N L + + K I + R W + L + H + VH DL
Sbjct: 104 YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----------HTIHQHGIVHSDL 153
Query: 499 RPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSR 558
+P+N L+ M I DFG+A + +T V + S GT P ++S+
Sbjct: 154 KPANFLIVDGMLKLI-DFGIAN--QMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 559 SYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKP 618
K + K D++S G IL M GK P QI +N + + I++ P
Sbjct: 210 -------GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI----INQISKLHAIID---P 255
Query: 619 MTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658
+I P + E ++ VLK C+ + P +R S+
Sbjct: 256 NHEIEFPDIP-----EKDLQDVLKC---CLKRDPKQRISI 287
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 118/299 (39%), Gaps = 62/299 (20%)
Query: 375 LGKSTIGIVYKVALNNEEAVAVR--RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432
+G V++V ++ A++ L Q ++ E + K++ + +R Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 433 WSV-DEKLLIYDYIPNGSLATAIHGKAGIISY-RPLSWSDRLRIIKGVAKGIAFLHEVSP 490
+ + D+ + + N L + + K I + R W + L + H +
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----------HTIHQ 173
Query: 491 KRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
VH DL+P+N L+ M I DFG+A Q T + ++ S +
Sbjct: 174 HGIVHSDLKPANFLIVDGMLKLI-DFGIANQM------------QPDTTSVVKDS--QVG 218
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQK-----------WDIYSYGVILLEMISGKLPMIQIG 599
A+N Y PEA K +++ D++S G IL M GK P QI
Sbjct: 219 AVN-------YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI- 270
Query: 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658
+N + + I++ P +I P + E ++ VLK C+ + P +R S+
Sbjct: 271 ---INQISKLHAIID---PNHEIEFPDIP-----EKDLQDVLKC---CLKRDPKQRISI 315
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 86/226 (38%), Gaps = 34/226 (15%)
Query: 375 LGKSTIGIVYKVALNNEE-AVAVRRLGNGGWQRFKEFQTEA-EAIGKIRHPNIVSLRAYF 432
LG+ + G V+++ AV+++ R + F+ E A + P IV L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + GSL + + + R L + + +G+ +LH +R
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY------LGQALEGLEYLHS---RR 205
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+HGD++ N+LL SD A L D V + G L + Y
Sbjct: 206 ILHGDVKADNVLLS-------SDGSHAALCDFGH---AVCLQPDGLGKSLLTGDY----- 250
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQI 598
+ APE R K D++S ++L M++G P Q
Sbjct: 251 --IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 294
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 66/167 (39%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ N L+ L + N +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLE 172
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 173 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 66/167 (39%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ N L+ L + N +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLE 172
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 173 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 63/176 (35%), Gaps = 36/176 (20%)
Query: 422 HPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKG 481
HP + L F + D + +++ G L I R ++ +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE------IISA 136
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541
+ FLH+ K ++ DL+ N+LL ++DFG+ + T + GTP
Sbjct: 137 LMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT-----ATFCGTP 188
Query: 542 LQSSPYEFTALNSTTSRSYYQAPE--ASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
Y APE + P W ++ GV+L EM+ G P
Sbjct: 189 ------------------DYIAPEILQEMLYGPAVDW--WAMGVLLYEMLCGHAPF 224
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 28/109 (25%)
Query: 485 LHEVSPKRYVHGDLRPSNILLGKNMEPHIS--DFGLARLADIAEETPEVHWEQSTTGTPL 542
L + R +H DL+P NILL + I DFG
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG------------------------- 247
Query: 543 QSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
SS YE + +Y+APE + D++S G IL E+++G
Sbjct: 248 -SSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 40/163 (24%)
Query: 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
L++ + + G L + I + + + + I K + + I +LH ++ H D+
Sbjct: 135 LIVXECLDGGELFSRIQDRGD----QAFTEREASEIXKSIGEAIQYLHSIN---IAHRDV 187
Query: 499 RPSNILLGK---NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST 555
+P N+L N ++DFG A+ E T+ NS
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAK---------------------------ETTSHNSL 220
Query: 556 TS---RSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595
T+ YY APE K + D +S GVI ++ G P
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 86/226 (38%), Gaps = 34/226 (15%)
Query: 375 LGKSTIGIVYKVALNNEE-AVAVRRLGNGGWQRFKEFQTEA-EAIGKIRHPNIVSLRAYF 432
LG+ + G V+++ AV+++ R + F+ E A + P IV L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + GSL + + + R L + + +G+ +LH +R
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY------LGQALEGLEYLHS---RR 186
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+HGD++ N+LL SD A L D V + G L + Y
Sbjct: 187 ILHGDVKADNVLLS-------SDGSHAALCDFGH---AVCLQPDGLGKDLLTGDY----- 231
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQI 598
+ APE R K D++S ++L M++G P Q
Sbjct: 232 --IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 275
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 20/119 (16%)
Query: 478 VAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQST 537
+ + + FLH+ + H DL+P NIL SD+ L + + E+S
Sbjct: 146 LCQAVKFLHD---NKLTHTDLKPENILFVN------SDYELTYNLEKKRD------ERSV 190
Query: 538 TGTPLQ-----SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591
T ++ S+ ++ ++ S +Y+APE +Q D++S G I+ E G
Sbjct: 191 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 66/167 (39%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ N L+ L + N +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLE 172
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 173 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 38/179 (21%)
Query: 420 IRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLR-IIKGV 478
+RHPNIV + + ++ +Y G L I AG S D R + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFS------EDEARFFFQQL 124
Query: 479 AKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH--ISDFGLARLADIAEETPEVHWEQS 536
G+++ H + + H DL+ N LL + P I FG ++ + + P +
Sbjct: 125 ISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQP-----KD 175
Query: 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK-WDIYSYGVILLEMISGKLP 594
T GTP Y APE ++ K D++S GV L M+ G P
Sbjct: 176 TVGTPA------------------YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 66/167 (39%), Gaps = 23/167 (13%)
Query: 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXX 142
+ R L G+LPV L +L LS N +P+ L L VLD+
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 143 XXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL---IPNDIA 199
+ L+ + L N LP G T L+KL L+ N L+ L + N +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLE 172
Query: 200 NLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI-GNPFLC 245
NL L L +Y IP+ L P AF+ GNP+LC
Sbjct: 173 NLDTLLLQENSLYT----------IPKGFFGSHLLPFAFLHGNPWLC 209
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 113/282 (40%), Gaps = 44/282 (15%)
Query: 383 VYKVALNNEEAVAVR--RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-DEKL 439
V++V ++ A++ L Q ++ E + K++ + +R Y + + D+ +
Sbjct: 44 VFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103
Query: 440 LIYDYIPNGSLATAIHGKAGIISY-RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498
+ N L + + K I + R W + L + H + VH DL
Sbjct: 104 YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----------HTIHQHGIVHSDL 153
Query: 499 RPSNILLGKNMEPHISDFGLARLADIAEETPEVHW--EQSTTGTPLQSSPYEFTALNSTT 556
+P+N L+ M I DFG+A + P+ + S GT P ++S+
Sbjct: 154 KPANFLIVDGMLKLI-DFGIAN-----QMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 557 SRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDR 616
K + K D++S G IL M GK P QI +N + + I++
Sbjct: 208 EN-------GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI----INQISKLHAIID-- 254
Query: 617 KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658
P +I P + E ++ VLK C+ + P +R S+
Sbjct: 255 -PNHEIEFPDIP-----EKDLQDVLKC---CLKRDPKQRISI 287
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLAR 520
R LS L + + + F+H K ++H D++P N L+G + + +I DFGLA+
Sbjct: 98 RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
Query: 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYS 580
+ ++T Q PY + T+R Y + + +++ D+ S
Sbjct: 155 -----------KYRDTST---HQHIPYRENKNLTGTAR--YASVNTHLGIEQSRRDDLES 198
Query: 581 YGVILLEMISGKLP 594
G +L+ + G LP
Sbjct: 199 LGYVLMYFLRGSLP 212
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 21/118 (17%)
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLG-KNMEP-HISDFGLARLADIAEETPEVHWEQSTTG 539
+ ++HE YVHGD++ +N+LLG KN + +++D+GL+ + + E G
Sbjct: 164 LEYIHE---NEYVHGDIKAANLLLGYKNPDQVYLADYGLS-YRYCPNGNHKQYQENPRKG 219
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
+ EFT+L +A K +++ D+ G +L + GKLP Q
Sbjct: 220 ---HNGTIEFTSL------------DAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+II+ V +G+ +LH + R +H D++P NILL N E +I RLA A E
Sbjct: 134 KIIQQVLQGLDYLH--TKCRIIHTDIKPENILLSVN-EQYIR-----RLAAEATE----- 180
Query: 533 WEQSTTGTPLQSS 545
W++S P S+
Sbjct: 181 WQRSGAPPPSGSA 193
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+II+ V +G+ +LH + R +H D++P NILL N E +I RLA A E
Sbjct: 150 KIIQQVLQGLDYLH--TKCRIIHTDIKPENILLSVN-EQYIR-----RLAAEATE----- 196
Query: 533 WEQSTTGTPLQSS 545
W++S P S+
Sbjct: 197 WQRSGAPPPSGSA 209
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 35/142 (24%)
Query: 106 NLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSF 165
++ L L GN F+ VP ++ K+L ++DL R+ T L+ SF
Sbjct: 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSN--------------NRIST--LSNQSF 74
Query: 166 TGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIP 225
+ N+T L L LS+N L + P L LRLL+ L N++S ++P
Sbjct: 75 S---------NMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLS------LHGNDIS-VVP 118
Query: 226 QNA--ALLSLGPTAFIGNPFLC 245
+ A L +L A NP C
Sbjct: 119 EGAFNDLSALSHLAIGANPLYC 140
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 85/225 (37%), Gaps = 34/225 (15%)
Query: 375 LGKSTIGIVYKVALNNEE-AVAVRRLGNGGWQRFKEFQTEA-EAIGKIRHPNIVSLRAYF 432
LG+ + G V+++ AV+++ R + F+ E A + P IV L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR 492
+ + + GSL I + R L + + +G+ +LH +R
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY------LGQALEGLEYLHT---RR 184
Query: 493 YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTAL 552
+HGD++ N+LL SD A L D + + G L + Y
Sbjct: 185 ILHGDVKADNVLLS-------SDGSRAALCDFGH---ALCLQPDGLGKSLLTGDY----- 229
Query: 553 NSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
+ APE + K DI+S ++L M++G P Q
Sbjct: 230 --IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQST- 537
I+ + + K ++H D++P N L+G K +I DFGLA+ A + + ++
Sbjct: 115 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 174
Query: 538 -TGTPLQSS 545
TGT +S
Sbjct: 175 LTGTARYAS 183
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQST- 537
I+ + + K ++H D++P N L+G K +I DFGLA+ A + + ++
Sbjct: 115 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 174
Query: 538 -TGTPLQSS 545
TGT +S
Sbjct: 175 LTGTARYAS 183
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 482 IAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAEETPEVHWEQST- 537
I+ + + K ++H D++P N L+G K +I DFGLA+ A + + ++
Sbjct: 113 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 172
Query: 538 -TGTPLQSS 545
TGT +S
Sbjct: 173 LTGTARYAS 181
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 126 GKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDL 185
G + ++ LDL + +C L+ +VL N D F++ L +L+ LDL
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSS-LGSLEHLDL 107
Query: 186 SFNNLSGLIPNDIANLSRLRLL 207
S+N LS L + LS L L
Sbjct: 108 SYNYLSNLSSSWFKPLSSLTFL 129
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 149
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 150 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 196
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W + GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 197 W--TLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 236
Query: 593 LPMI 596
P
Sbjct: 237 PPFF 240
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 465 PLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524
PLS L+I + + +H P +H DL+ N+LL S+ G +L D
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPP-IIHRDLKVENLLL--------SNQGTIKLCDF 182
Query: 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP---TQKWDIYSY 581
T H+ + ++ E N+T Y+ PE + +K DI++
Sbjct: 183 GSATTISHYPDYSWSAQRRALVEEEITRNTT---PMYRTPEIIDLYSNFPIGEKQDIWAL 239
Query: 582 GVIL 585
G IL
Sbjct: 240 GCIL 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 134
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 135 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 181
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W + GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 182 W--TLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 221
Query: 593 LPMI 596
P
Sbjct: 222 PPFF 225
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 18/110 (16%)
Query: 110 LILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXXXIV---QCK------------- 153
L++ N+F G + I KL Y Q L L ++ QC
Sbjct: 68 LVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKP 127
Query: 154 --RLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANL 201
L+ +VL N+ P F N+ LDL+FN + + D+ N
Sbjct: 128 LTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNF 177
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 20/118 (16%)
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
+G+ +LH +R +HGD++ N+LL SD A L D + + G
Sbjct: 161 EGLEYLHT---RRILHGDVKADNVLLS-------SDGSRAALCDFGH---ALCLQPDGLG 207
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
L + Y + APE + K DI+S ++L M++G P Q
Sbjct: 208 KSLLTGDY-------IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + ++ ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 151 VLT------FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + ++ ++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 152 VLT------FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 196
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 197 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 236
Query: 593 LPMI 596
P
Sbjct: 237 PPFF 240
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + ++ ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 151 VLT------FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 18/110 (16%)
Query: 110 LILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXXXIV---QCK------------- 153
L++ N+F G + I KL Y Q L L ++ QC
Sbjct: 68 LVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKP 127
Query: 154 --RLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANL 201
L+ +VL N+ P F N+ LDL+FN + + D+ N
Sbjct: 128 LTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNF 177
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 26/103 (25%)
Query: 494 VHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553
++ DL+P N+L+ + ++DFG A+ A T GTP E+ A
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT--------LCGTP------EYLAPE 229
Query: 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596
S+ Y +A D ++ GV++ EM +G P
Sbjct: 230 IILSKGYNKAV------------DWWALGVLIYEMAAGYPPFF 260
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 41 NSNEDPCSWNGITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVE 100
+S D W+ + Q+F+ I A++ + R+ L N+ + LP E
Sbjct: 218 DSKYDDQLWHALDLSNLQIFN-----------ISANIFKYDFLTRLYLNGNSLT-ELPAE 265
Query: 101 LFNASNLQSLILSGNSFSGPVPMQIG---KLKYLQVLD 135
+ N SNL+ L LS N + +P ++G +LKY D
Sbjct: 266 IKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFD 302
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + ++ ++
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 144 VLT------FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 188
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 189 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 228
Query: 593 LPMI 596
P
Sbjct: 229 PPFF 232
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 20/118 (16%)
Query: 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539
+G+ +LH +R +HGD++ N+LL SD A L D + + G
Sbjct: 177 EGLEYLHT---RRILHGDVKADNVLLS-------SDGSRAALCDFGH---ALCLQPDGLG 223
Query: 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597
L + Y + APE + K DI+S ++L M++G P Q
Sbjct: 224 KSLLTGDY-------IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 148
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 149 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 149
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 150 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 196
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 197 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 236
Query: 593 LPMI 596
P
Sbjct: 237 PPFF 240
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 148
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 149 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 148
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 149 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 148
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 149 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 148
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 149 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 149
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 150 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 196
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 197 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 236
Query: 593 LPMI 596
P
Sbjct: 237 PPFF 240
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 141
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 142 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 188
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 189 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 228
Query: 593 LPMI 596
P
Sbjct: 229 PPFF 232
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 126 GKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDL 185
G + ++ LDL + +C L+ +VL N D F++ L +L+ LDL
Sbjct: 23 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSS-LGSLEHLDL 81
Query: 186 SFNNLSGLIPNDIANLSRLRLL 207
S+N LS L + LS L L
Sbjct: 82 SYNYLSNLSSSWFKPLSSLTFL 103
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 148
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 149 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 149
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 150 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 196
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 197 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 236
Query: 593 LPMI 596
P
Sbjct: 237 PPFF 240
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 149
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 150 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 196
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 197 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 236
Query: 593 LPMI 596
P
Sbjct: 237 PPFF 240
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 169
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 170 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRT 216
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 217 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 256
Query: 593 LPMI 596
P
Sbjct: 257 PPFF 260
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Query: 71 GFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNA-SNLQSLILSGNSFSGPVPMQIGKLK 129
G G S+ R+ L +N SLP +F+ + L L LS N KL
Sbjct: 18 GLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLT 76
Query: 130 YLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFN 188
L +L L + +LK + L+ N +PDG LT+LQK+ L N
Sbjct: 77 KLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 134
>pdb|3OGK|B Chain B, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|D Chain D, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|F Chain F, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|H Chain H, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|J Chain J, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|L Chain L, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|N Chain N, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|P Chain P, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGL|B Chain B, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|D Chain D, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|F Chain F, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|H Chain H, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|J Chain J, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|L Chain L, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|N Chain N, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|P Chain P, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGM|B Chain B, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|D Chain D, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|F Chain F, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|H Chain H, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|J Chain J, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|L Chain L, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|N Chain N, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|P Chain P, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
Length = 592
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 149 IVQCKRLKTVVLNQNSFT---GPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSR 203
+ C+++KT+++ ++SF+ G A + T+L+ L+ + + P D+ ++R
Sbjct: 160 VTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 469 SDRLRIIKGVAKGIAFLHEVSP------KRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522
SD R+I+G + +HE+ P ++ V P I ++EP I D + LA
Sbjct: 71 SDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTI---SDLEPRIRDVTRSLLA 127
Query: 523 DIAE 526
D E
Sbjct: 128 DAGE 131
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 469 SDRLRIIKGVAKGIAFLHEVSP------KRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522
SD R+I+G + +HE+ P ++ V P I ++EP I D + LA
Sbjct: 91 SDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTI---SDLEPRIRDVTRSLLA 147
Query: 523 DIAE 526
D E
Sbjct: 148 DAGE 151
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 493 YVHGDLRPSNILLGKNMEPHISDFG--LARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550
YVH D++P NILL + ++DFG L AD + GTP SP
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS------LVAVGTPDYLSPEILQ 236
Query: 551 ALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602
A+ PE D ++ GV EM G+ P + E
Sbjct: 237 AVGGGPGTG-SYGPEC----------DWWALGVFAYEMFYGQTPFYADSTAE 277
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAA 148
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 149 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533
II+ V +G+ +LH S + +H D++P NIL+ + D + R+A A E W
Sbjct: 145 IIRQVLQGLDYLH--SKCKIIHTDIKPENILMC------VDDAYVRRMAAEATE-----W 191
Query: 534 EQS----TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR 570
+++ +G+ + ++P +N R+ A K+R
Sbjct: 192 QKAGAPPPSGSAVSTAPAADLLVNPLDPRN------ADKIR 226
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 105 SNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNS 164
+NL LIL+GN KL L+ L L + L + L N
Sbjct: 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQ 144
Query: 165 FTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVY 212
LP G LT L +LDLS+N L L L++L+ L R+Y
Sbjct: 145 LQS-LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL--RLY 189
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 105 SNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNS 164
S+L +LIL+GN L LQ L I K LK + + N
Sbjct: 78 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 137
Query: 165 FTG-PLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRL 204
LP+ F+ NLT L+ LDLS N + + D+ L ++
Sbjct: 138 IQSFKLPEYFS-NLTNLEHLDLSSNKIQSIYCTDLRVLHQM 177
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 105 SNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNS 164
S+L +LIL+GN L LQ L I K LK + + N
Sbjct: 77 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 136
Query: 165 FTG-PLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRL 204
LP+ F+ NLT L+ LDLS N + + D+ L ++
Sbjct: 137 IQSFKLPEYFS-NLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 105 SNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNS 164
S+L +LIL+GN L LQ L I K LK + + N
Sbjct: 77 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 136
Query: 165 FTG-PLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRL 204
LP+ F+ NLT L+ LDLS N + + D+ L ++
Sbjct: 137 IQSFKLPEYFS-NLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 105 SNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLXXXXXXXXXXXXIVQCKRLKTVVLNQNS 164
S+L +LIL+GN L LQ L I K LK + + N
Sbjct: 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135
Query: 165 FTG-PLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRL 204
LP+ F+ NLT L+ LDLS N + + D+ L ++
Sbjct: 136 IQSFKLPEYFS-NLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 413 EAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRL 472
E + + P +V L F ++ +Y+P G + + + + G S P +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFS-EPHARFYAA 148
Query: 473 RIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532
+I+ +LH + ++ DL+P N+L+ + ++DFG A+
Sbjct: 149 QIVLT----FEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK------RVKGRT 195
Query: 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592
W GTP E+ A S+ Y +A D ++ GV++ EM +G
Sbjct: 196 W--XLCGTP------EYLAPEIILSKGYNKAV------------DWWALGVLIYEMAAGY 235
Query: 593 LPMI 596
P
Sbjct: 236 PPFF 239
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,255,090
Number of Sequences: 62578
Number of extensions: 851671
Number of successful extensions: 4523
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 2401
Number of HSP's gapped (non-prelim): 1353
length of query: 686
length of database: 14,973,337
effective HSP length: 105
effective length of query: 581
effective length of database: 8,402,647
effective search space: 4881937907
effective search space used: 4881937907
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)