Query 042348
Match_columns 686
No_of_seqs 695 out of 4658
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 05:23:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042348.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042348hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 7.8E-65 1.7E-69 607.6 42.4 522 58-673 405-956 (968)
2 KOG1187 Serine/threonine prote 100.0 8.3E-54 1.8E-58 446.4 26.9 286 358-671 61-355 (361)
3 KOG0581 Mitogen-activated prot 100.0 1.6E-49 3.5E-54 389.6 20.5 257 362-664 76-335 (364)
4 KOG0192 Tyrosine kinase specif 100.0 1.1E-47 2.3E-52 397.2 25.1 262 361-670 37-305 (362)
5 KOG0575 Polo-like serine/threo 100.0 1.1E-46 2.3E-51 390.5 22.7 243 372-664 23-269 (592)
6 KOG0197 Tyrosine kinases [Sign 100.0 4.5E-47 9.7E-52 389.9 18.6 264 361-673 202-466 (468)
7 KOG0595 Serine/threonine-prote 100.0 5.2E-46 1.1E-50 367.6 19.6 192 375-599 18-218 (429)
8 KOG0615 Serine/threonine prote 100.0 3.1E-46 6.8E-51 368.3 15.7 247 372-664 177-437 (475)
9 KOG0591 NIMA (never in mitosis 100.0 1.9E-46 4.1E-51 352.0 12.1 253 373-666 25-283 (375)
10 KOG0598 Ribosomal protein S6 k 100.0 3.4E-45 7.3E-50 359.2 18.8 262 373-684 31-301 (357)
11 KOG0593 Predicted protein kina 100.0 2.3E-44 5.1E-49 341.2 14.2 257 374-664 9-284 (396)
12 KOG1026 Nerve growth factor re 100.0 6.6E-44 1.4E-48 383.9 18.0 260 373-673 492-767 (774)
13 KOG0592 3-phosphoinositide-dep 100.0 4.2E-43 9E-48 357.6 19.9 257 372-665 78-339 (604)
14 KOG0600 Cdc2-related protein k 100.0 2E-42 4.2E-47 349.9 21.0 258 374-664 124-400 (560)
15 KOG0196 Tyrosine kinase, EPH ( 100.0 1E-43 2.2E-48 374.3 12.0 253 372-669 634-892 (996)
16 KOG0198 MEKK and related serin 100.0 1.1E-42 2.4E-47 348.5 18.2 254 372-668 22-280 (313)
17 KOG0578 p21-activated serine/t 100.0 6.8E-43 1.5E-47 359.4 16.4 243 374-664 280-523 (550)
18 KOG0661 MAPK related serine/th 100.0 6.7E-43 1.5E-47 350.7 15.1 258 372-665 15-292 (538)
19 KOG0597 Serine-threonine prote 100.0 1.3E-42 2.9E-47 353.6 17.0 241 373-664 8-251 (808)
20 KOG0659 Cdk activating kinase 100.0 5.9E-42 1.3E-46 319.8 19.9 259 372-664 7-281 (318)
21 PHA02988 hypothetical protein; 100.0 1.5E-41 3.4E-46 348.5 23.6 259 360-669 13-280 (283)
22 KOG0582 Ste20-like serine/thre 100.0 9.7E-42 2.1E-46 339.8 20.6 258 373-664 32-293 (516)
23 KOG0193 Serine/threonine prote 100.0 2.1E-42 4.5E-47 356.6 14.5 277 359-682 386-667 (678)
24 KOG4721 Serine/threonine prote 100.0 2E-42 4.3E-47 352.0 14.1 259 360-677 119-381 (904)
25 KOG0583 Serine/threonine prote 100.0 3.2E-41 7E-46 352.5 23.0 243 373-664 23-275 (370)
26 KOG0605 NDR and related serine 100.0 4.3E-41 9.4E-46 343.4 21.0 268 373-664 147-445 (550)
27 KOG0588 Serine/threonine prote 100.0 2.4E-41 5.3E-46 351.5 18.6 242 373-665 18-264 (786)
28 KOG0616 cAMP-dependent protein 100.0 2.7E-41 5.9E-46 320.0 17.0 230 373-655 50-283 (355)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 8E-41 1.7E-45 352.9 21.8 259 372-670 12-336 (338)
30 KOG1095 Protein tyrosine kinas 100.0 2.5E-41 5.5E-46 377.1 18.3 261 372-673 697-966 (1025)
31 KOG0201 Serine/threonine prote 100.0 8.1E-42 1.8E-46 340.4 11.6 243 373-664 19-263 (467)
32 KOG0194 Protein tyrosine kinas 100.0 6.4E-41 1.4E-45 350.5 16.1 252 373-671 163-423 (474)
33 cd05571 STKc_PKB Catalytic dom 100.0 2.7E-40 5.8E-45 346.2 20.8 241 374-664 2-251 (323)
34 cd05585 STKc_YPK1_like Catalyt 100.0 5.4E-40 1.2E-44 342.3 21.5 240 375-664 1-247 (312)
35 KOG0694 Serine/threonine prote 100.0 3E-40 6.5E-45 346.4 18.9 262 373-685 374-645 (694)
36 cd05631 STKc_GRK4 Catalytic do 100.0 1.2E-39 2.7E-44 335.1 23.1 252 373-669 6-268 (285)
37 cd05096 PTKc_DDR1 Catalytic do 100.0 1.6E-39 3.6E-44 337.6 23.8 261 373-667 11-304 (304)
38 KOG0663 Protein kinase PITSLRE 100.0 7E-40 1.5E-44 315.0 18.3 258 373-664 82-361 (419)
39 cd05593 STKc_PKB_gamma Catalyt 100.0 1.2E-39 2.5E-44 341.9 21.5 241 374-664 2-251 (328)
40 KOG3653 Transforming growth fa 100.0 3E-39 6.5E-44 324.2 23.3 263 374-674 217-509 (534)
41 cd05595 STKc_PKB_beta Catalyti 100.0 1.3E-39 2.8E-44 340.9 21.7 241 374-664 2-251 (323)
42 KOG0658 Glycogen synthase kina 100.0 1.1E-40 2.3E-45 326.7 12.3 256 373-664 30-306 (364)
43 cd05612 STKc_PRKX_like Catalyt 100.0 9.5E-40 2.1E-44 337.0 19.5 239 373-664 7-254 (291)
44 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.1E-39 9E-44 327.8 23.0 250 372-668 10-265 (266)
45 PTZ00263 protein kinase A cata 100.0 1.6E-39 3.4E-44 341.2 20.2 239 373-664 24-271 (329)
46 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1E-38 2.2E-43 323.0 24.9 246 373-666 10-256 (256)
47 cd05584 STKc_p70S6K Catalytic 100.0 3.6E-39 7.7E-44 337.7 22.2 241 374-664 3-256 (323)
48 KOG0585 Ca2+/calmodulin-depend 100.0 1.9E-39 4.1E-44 325.3 18.5 251 374-667 104-375 (576)
49 KOG0589 Serine/threonine prote 100.0 7.6E-40 1.6E-44 335.8 15.8 244 373-664 10-258 (426)
50 cd05104 PTKc_Kit Catalytic dom 100.0 8.3E-39 1.8E-43 341.3 24.3 256 372-667 40-373 (375)
51 cd05590 STKc_nPKC_eta Catalyti 100.0 4E-39 8.8E-44 336.7 21.4 241 374-664 2-253 (320)
52 KOG0580 Serine/threonine prote 100.0 1.2E-39 2.7E-44 300.0 15.0 243 372-664 27-273 (281)
53 PTZ00426 cAMP-dependent protei 100.0 3.5E-39 7.6E-44 339.3 20.0 239 373-664 36-284 (340)
54 KOG0610 Putative serine/threon 100.0 1.1E-38 2.4E-43 315.6 22.0 275 374-671 84-401 (459)
55 cd05591 STKc_nPKC_epsilon Cata 100.0 5.9E-39 1.3E-43 335.9 21.3 241 374-664 2-254 (321)
56 cd05594 STKc_PKB_alpha Catalyt 100.0 2.9E-39 6.3E-44 338.8 18.8 242 374-664 2-252 (325)
57 cd05106 PTKc_CSF-1R Catalytic 100.0 9.5E-39 2.1E-43 340.5 22.7 257 372-668 43-372 (374)
58 KOG0611 Predicted serine/threo 100.0 2.3E-39 4.9E-44 317.6 16.2 241 373-665 59-304 (668)
59 cd05592 STKc_nPKC_theta_delta 100.0 1.1E-38 2.3E-43 332.9 22.2 240 374-663 2-247 (316)
60 cd06649 PKc_MEK2 Catalytic dom 100.0 2E-38 4.3E-43 333.2 24.3 258 373-665 11-302 (331)
61 cd05618 STKc_aPKC_iota Catalyt 100.0 9.6E-39 2.1E-43 335.1 21.6 246 374-664 2-262 (329)
62 KOG0574 STE20-like serine/thre 100.0 1.5E-40 3.2E-45 314.3 7.0 243 374-664 40-283 (502)
63 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-38 2.7E-43 332.2 22.3 240 374-663 2-247 (316)
64 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.5E-38 3.3E-43 327.6 22.4 258 373-664 11-285 (288)
65 PF07714 Pkinase_Tyr: Protein 100.0 4.2E-39 9.1E-44 326.2 18.0 248 373-665 5-259 (259)
66 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.1E-38 2.5E-43 335.5 21.3 245 373-664 7-257 (333)
67 KOG1989 ARK protein kinase fam 100.0 4.5E-39 9.8E-44 348.5 18.4 257 372-670 42-313 (738)
68 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-38 3E-43 332.5 21.5 241 374-664 2-252 (318)
69 cd05582 STKc_RSK_N N-terminal 100.0 3.5E-39 7.6E-44 337.2 17.1 237 374-660 3-245 (318)
70 cd05608 STKc_GRK1 Catalytic do 100.0 1.9E-38 4.1E-43 325.5 22.1 248 375-664 1-257 (280)
71 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-38 2.4E-43 334.7 20.9 246 374-664 2-262 (329)
72 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.2E-38 2.6E-43 331.0 20.7 259 373-664 11-288 (303)
73 PTZ00267 NIMA-related protein 100.0 2.4E-38 5.1E-43 348.0 23.9 250 372-664 72-323 (478)
74 KOG0660 Mitogen-activated prot 100.0 3.9E-39 8.4E-44 315.2 15.6 261 374-669 29-317 (359)
75 cd05620 STKc_nPKC_delta Cataly 100.0 1.4E-38 2.9E-43 332.1 20.7 241 374-664 2-248 (316)
76 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.5E-38 1.2E-42 317.7 24.5 246 373-666 10-256 (256)
77 cd05072 PTKc_Lyn Catalytic dom 100.0 3.5E-38 7.5E-43 320.1 22.9 249 373-668 12-261 (261)
78 cd05049 PTKc_Trk Catalytic dom 100.0 4.1E-38 8.8E-43 323.1 23.6 255 372-667 10-280 (280)
79 KOG2345 Serine/threonine prote 100.0 3.1E-39 6.6E-44 298.7 13.5 266 373-669 27-301 (302)
80 KOG1094 Discoidin domain recep 100.0 4.9E-39 1.1E-43 328.7 16.3 259 372-668 543-804 (807)
81 cd05607 STKc_GRK7 Catalytic do 100.0 3.9E-38 8.5E-43 322.6 22.9 249 375-667 1-253 (277)
82 cd05589 STKc_PKN Catalytic dom 100.0 2.5E-38 5.5E-43 331.5 22.0 241 373-664 5-257 (324)
83 cd07848 STKc_CDKL5 Catalytic d 100.0 1.4E-38 3E-43 327.8 19.7 259 373-664 7-284 (287)
84 cd05048 PTKc_Ror Catalytic Dom 100.0 5E-38 1.1E-42 323.0 23.7 255 373-668 11-283 (283)
85 cd05575 STKc_SGK Catalytic dom 100.0 1.7E-38 3.8E-43 332.6 20.6 236 374-659 2-242 (323)
86 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.6E-38 1.6E-42 317.6 24.7 250 372-668 11-261 (261)
87 cd05093 PTKc_TrkB Catalytic do 100.0 8.2E-38 1.8E-42 322.2 24.9 257 373-670 11-281 (288)
88 cd05052 PTKc_Abl Catalytic dom 100.0 9.8E-38 2.1E-42 317.2 25.0 249 373-668 12-262 (263)
89 cd05068 PTKc_Frk_like Catalyti 100.0 8.2E-38 1.8E-42 317.4 24.2 249 373-668 12-261 (261)
90 PLN00034 mitogen-activated pro 100.0 3.7E-38 8.1E-43 334.3 22.5 242 373-664 80-328 (353)
91 cd05108 PTKc_EGFR Catalytic do 100.0 4.1E-38 8.9E-43 328.9 22.5 253 373-672 13-272 (316)
92 KOG0577 Serine/threonine prote 100.0 3.8E-39 8.3E-44 329.4 14.2 239 375-665 34-279 (948)
93 cd05094 PTKc_TrkC Catalytic do 100.0 9.1E-38 2E-42 322.4 24.6 258 373-671 11-285 (291)
94 cd05614 STKc_MSK2_N N-terminal 100.0 3.2E-38 6.9E-43 332.1 21.6 247 373-664 6-267 (332)
95 KOG0594 Protein kinase PCTAIRE 100.0 4E-38 8.7E-43 309.6 20.7 265 374-669 18-309 (323)
96 cd06650 PKc_MEK1 Catalytic dom 100.0 6.2E-38 1.3E-42 329.5 23.3 192 373-597 11-204 (333)
97 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.9E-38 1.1E-42 336.3 22.9 258 372-669 42-398 (400)
98 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-37 2.4E-42 317.4 24.3 251 372-668 9-265 (266)
99 KOG0599 Phosphorylase kinase g 100.0 2.7E-39 5.8E-44 302.2 11.3 247 372-665 22-284 (411)
100 KOG0033 Ca2+/calmodulin-depend 100.0 8.6E-40 1.9E-44 301.1 7.5 246 372-664 16-267 (355)
101 PHA03212 serine/threonine kina 100.0 5.6E-38 1.2E-42 335.7 22.7 254 373-664 98-376 (391)
102 KOG2052 Activin A type IB rece 100.0 2.3E-38 5.1E-43 315.5 18.2 265 373-673 217-508 (513)
103 cd05084 PTKc_Fes Catalytic dom 100.0 1.8E-37 3.8E-42 313.2 25.0 248 374-667 2-252 (252)
104 cd05605 STKc_GRK4_like Catalyt 100.0 7.4E-38 1.6E-42 321.9 22.3 247 373-664 6-261 (285)
105 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 9.2E-38 2E-42 319.2 22.6 239 374-666 2-274 (274)
106 cd05587 STKc_cPKC Catalytic do 100.0 6.3E-38 1.4E-42 328.5 21.9 242 373-664 6-257 (324)
107 cd05115 PTKc_Zap-70 Catalytic 100.0 2.3E-37 5.1E-42 313.2 25.0 248 375-668 3-255 (257)
108 cd05035 PTKc_Axl_like Catalyti 100.0 1.3E-37 2.8E-42 318.0 23.3 255 373-668 5-272 (273)
109 cd05602 STKc_SGK1 Catalytic do 100.0 4.5E-38 9.8E-43 329.7 20.4 241 374-664 2-247 (325)
110 cd05075 PTKc_Axl Catalytic dom 100.0 1.3E-37 2.8E-42 317.9 23.2 255 373-668 5-271 (272)
111 cd08228 STKc_Nek6 Catalytic do 100.0 1E-37 2.2E-42 317.8 22.3 255 373-669 8-266 (267)
112 cd05059 PTKc_Tec_like Catalyti 100.0 1.9E-37 4.2E-42 313.7 24.2 245 373-665 10-255 (256)
113 KOG4278 Protein tyrosine kinas 100.0 9.8E-39 2.1E-43 327.6 14.7 252 372-670 272-525 (1157)
114 cd05616 STKc_cPKC_beta Catalyt 100.0 7.1E-38 1.5E-42 328.0 21.4 242 373-664 6-257 (323)
115 cd05603 STKc_SGK2 Catalytic do 100.0 4.5E-38 9.9E-43 329.2 19.9 236 374-659 2-242 (321)
116 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.8E-37 3.8E-42 315.0 23.1 239 374-666 2-262 (262)
117 cd05617 STKc_aPKC_zeta Catalyt 100.0 9E-38 1.9E-42 327.6 21.6 246 374-664 2-260 (327)
118 cd05085 PTKc_Fer Catalytic dom 100.0 2.6E-37 5.6E-42 311.5 24.0 246 374-666 2-249 (250)
119 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.6E-37 5.6E-42 317.9 24.3 258 373-669 10-284 (284)
120 KOG4257 Focal adhesion tyrosin 100.0 1.8E-38 3.9E-43 326.3 15.4 252 371-670 393-651 (974)
121 cd05604 STKc_SGK3 Catalytic do 100.0 3.9E-38 8.5E-43 330.2 18.4 242 374-665 2-248 (325)
122 cd05054 PTKc_VEGFR Catalytic d 100.0 1.3E-37 2.9E-42 327.3 22.2 258 372-669 12-334 (337)
123 cd05111 PTK_HER3 Pseudokinase 100.0 4E-37 8.6E-42 315.5 25.1 251 373-670 13-270 (279)
124 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.4E-37 7.3E-42 312.7 24.3 248 372-667 11-259 (260)
125 cd07862 STKc_CDK6 Catalytic do 100.0 1.6E-37 3.5E-42 320.4 22.1 258 373-664 7-287 (290)
126 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.1E-37 2.3E-42 329.2 21.0 260 373-664 6-290 (338)
127 cd05601 STKc_CRIK Catalytic do 100.0 3E-38 6.5E-43 332.0 16.8 247 373-664 7-263 (330)
128 cd05062 PTKc_IGF-1R Catalytic 100.0 2E-37 4.3E-42 317.5 22.3 254 373-667 12-277 (277)
129 KOG4279 Serine/threonine prote 100.0 4.5E-39 9.7E-44 333.9 10.0 246 372-664 580-832 (1226)
130 cd05090 PTKc_Ror1 Catalytic do 100.0 4.4E-37 9.5E-42 316.0 24.6 254 373-667 11-282 (283)
131 cd05116 PTKc_Syk Catalytic dom 100.0 3E-37 6.5E-42 312.5 22.9 247 374-667 2-254 (257)
132 cd08229 STKc_Nek7 Catalytic do 100.0 3E-37 6.5E-42 314.3 23.0 255 373-669 8-266 (267)
133 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.5E-37 3.2E-42 319.4 20.9 265 373-669 10-282 (283)
134 PTZ00283 serine/threonine prot 100.0 1.4E-37 3.1E-42 341.8 21.7 249 373-664 38-297 (496)
135 cd05596 STKc_ROCK Catalytic do 100.0 1.4E-37 2.9E-42 331.4 20.9 246 373-664 49-304 (370)
136 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.5E-37 9.7E-42 313.3 23.8 252 372-668 10-267 (268)
137 cd05091 PTKc_Ror2 Catalytic do 100.0 3.5E-37 7.5E-42 316.7 22.9 254 373-667 11-282 (283)
138 cd05071 PTKc_Src Catalytic dom 100.0 6.6E-37 1.4E-41 310.9 24.6 248 373-668 12-260 (262)
139 cd05626 STKc_LATS2 Catalytic d 100.0 1.9E-37 4E-42 332.2 21.6 269 373-664 7-305 (381)
140 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.9E-37 1.5E-41 311.5 24.8 255 373-669 8-266 (267)
141 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.2E-37 2.6E-42 315.6 19.1 239 374-666 2-258 (258)
142 cd05040 PTKc_Ack_like Catalyti 100.0 4.5E-37 9.8E-42 311.1 23.1 249 374-666 2-256 (257)
143 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.8E-37 1.3E-41 327.8 25.1 257 372-668 42-399 (401)
144 cd05058 PTKc_Met_Ron Catalytic 100.0 7.6E-37 1.7E-41 310.4 24.7 252 374-669 2-260 (262)
145 cd06646 STKc_MAP4K5 Catalytic 100.0 2.6E-37 5.6E-42 314.8 21.3 248 373-665 15-266 (267)
146 cd05060 PTKc_Syk_like Catalyti 100.0 6.3E-37 1.4E-41 310.1 23.8 249 374-669 2-256 (257)
147 cd05069 PTKc_Yes Catalytic dom 100.0 8.2E-37 1.8E-41 309.9 24.6 247 373-667 12-259 (260)
148 cd05632 STKc_GRK5 Catalytic do 100.0 5.9E-37 1.3E-41 315.2 23.7 247 373-664 6-261 (285)
149 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.9E-37 1.1E-41 319.0 23.2 258 372-670 20-298 (304)
150 cd08529 STKc_FA2-like Catalyti 100.0 6.4E-37 1.4E-41 309.8 23.4 245 373-664 6-253 (256)
151 cd05615 STKc_cPKC_alpha Cataly 100.0 2.5E-37 5.4E-42 323.7 20.9 236 373-658 6-246 (323)
152 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.8E-38 1.5E-42 332.3 16.9 268 373-664 7-285 (350)
153 cd05045 PTKc_RET Catalytic dom 100.0 3.3E-37 7.2E-42 318.0 21.5 256 373-669 6-287 (290)
154 cd00192 PTKc Catalytic domain 100.0 8.6E-37 1.9E-41 309.6 24.2 252 374-666 2-262 (262)
155 cd05092 PTKc_TrkA Catalytic do 100.0 8.5E-37 1.9E-41 313.3 24.4 254 373-667 11-280 (280)
156 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.2E-37 1.1E-41 315.6 22.8 257 372-668 9-283 (284)
157 cd05109 PTKc_HER2 Catalytic do 100.0 4.2E-37 9.2E-42 315.4 22.1 253 373-672 13-272 (279)
158 cd05053 PTKc_FGFR Catalytic do 100.0 6.7E-37 1.5E-41 316.3 23.7 256 372-668 17-291 (293)
159 cd05097 PTKc_DDR_like Catalyti 100.0 7.6E-37 1.6E-41 316.2 23.9 260 373-667 11-295 (295)
160 cd05082 PTKc_Csk Catalytic dom 100.0 6.2E-37 1.4E-41 310.0 22.8 243 373-668 12-256 (256)
161 cd07868 STKc_CDK8 Catalytic do 100.0 4.2E-37 9E-42 321.6 22.1 199 373-597 7-218 (317)
162 cd05036 PTKc_ALK_LTK Catalytic 100.0 1E-36 2.2E-41 312.2 24.6 254 373-667 12-277 (277)
163 PHA03211 serine/threonine kina 100.0 2.9E-37 6.3E-42 334.0 21.5 256 373-664 175-455 (461)
164 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-36 2.7E-41 307.8 24.7 244 373-668 12-256 (256)
165 cd05065 PTKc_EphR_B Catalytic 100.0 4.1E-37 8.9E-42 313.7 21.3 254 372-668 9-268 (269)
166 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.2E-37 1.6E-41 311.9 23.1 255 374-666 2-268 (269)
167 cd05047 PTKc_Tie Catalytic dom 100.0 1.2E-36 2.6E-41 310.4 24.7 252 374-669 2-269 (270)
168 KOG0579 Ste20-like serine/thre 100.0 3.6E-38 7.7E-43 324.1 13.3 244 375-664 40-289 (1187)
169 cd05032 PTKc_InsR_like Catalyt 100.0 6.9E-37 1.5E-41 313.4 22.9 254 373-667 12-277 (277)
170 cd05089 PTKc_Tie1 Catalytic do 100.0 9.9E-37 2.2E-41 315.6 24.1 257 373-673 8-280 (297)
171 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-36 3.2E-41 308.0 24.8 247 373-667 12-259 (260)
172 cd06643 STKc_SLK Catalytic dom 100.0 1.4E-36 3.1E-41 312.0 24.8 247 373-665 11-263 (282)
173 cd05055 PTKc_PDGFR Catalytic d 100.0 8.6E-37 1.9E-41 316.6 23.2 253 372-668 40-301 (302)
174 cd05051 PTKc_DDR Catalytic dom 100.0 8.1E-37 1.8E-41 316.2 22.8 261 373-667 11-296 (296)
175 cd05066 PTKc_EphR_A Catalytic 100.0 1.6E-36 3.4E-41 309.1 24.5 251 373-668 10-266 (267)
176 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.2E-36 2.6E-41 316.6 24.0 259 372-671 23-302 (307)
177 cd05621 STKc_ROCK2 Catalytic d 100.0 3.5E-37 7.5E-42 327.8 20.4 246 373-664 49-304 (370)
178 cd06624 STKc_ASK Catalytic dom 100.0 1E-36 2.2E-41 310.6 22.9 246 373-664 14-265 (268)
179 cd05112 PTKc_Itk Catalytic dom 100.0 1.9E-36 4E-41 306.5 24.5 246 373-666 10-256 (256)
180 cd05088 PTKc_Tie2 Catalytic do 100.0 1.1E-36 2.4E-41 316.0 23.1 257 373-673 13-285 (303)
181 cd05625 STKc_LATS1 Catalytic d 100.0 4.8E-37 1E-41 329.4 20.9 268 373-664 7-305 (382)
182 cd05628 STKc_NDR1 Catalytic do 100.0 8.9E-37 1.9E-41 324.9 22.7 269 373-664 7-293 (363)
183 cd05095 PTKc_DDR2 Catalytic do 100.0 1.5E-36 3.3E-41 314.1 23.7 261 373-667 11-296 (296)
184 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-36 2.3E-41 317.9 22.6 264 372-676 17-301 (314)
185 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.3E-36 2.8E-41 321.0 23.5 259 372-670 12-341 (343)
186 cd05599 STKc_NDR_like Catalyti 100.0 3.1E-37 6.7E-42 328.9 18.9 268 373-664 7-296 (364)
187 cd05630 STKc_GRK6 Catalytic do 100.0 1.2E-36 2.5E-41 312.9 22.5 247 373-664 6-261 (285)
188 cd05034 PTKc_Src_like Catalyti 100.0 2.9E-36 6.3E-41 306.0 24.9 248 373-667 12-260 (261)
189 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.2E-36 2.7E-41 320.3 22.8 260 372-672 17-297 (334)
190 cd05629 STKc_NDR_like_fungal C 100.0 5.3E-37 1.2E-41 328.4 20.4 266 373-664 7-305 (377)
191 cd06654 STKc_PAK1 Catalytic do 100.0 1.5E-36 3.2E-41 314.0 22.9 244 373-664 26-270 (296)
192 cd05043 PTK_Ryk Pseudokinase d 100.0 1.8E-36 3.9E-41 310.9 23.3 258 372-670 11-278 (280)
193 cd07853 STKc_NLK Catalytic dom 100.0 6.3E-37 1.4E-41 327.3 20.7 255 373-664 6-288 (372)
194 cd05041 PTKc_Fes_like Catalyti 100.0 2.3E-36 4.9E-41 304.9 23.6 248 374-667 2-251 (251)
195 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-36 2.4E-41 317.1 21.9 258 373-664 12-286 (309)
196 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.7E-36 3.6E-41 307.3 22.7 237 374-666 2-259 (259)
197 cd05044 PTKc_c-ros Catalytic d 100.0 1.2E-36 2.6E-41 310.3 21.8 253 374-667 2-269 (269)
198 cd05598 STKc_LATS Catalytic do 100.0 4.7E-37 1E-41 328.8 19.4 268 373-664 7-301 (376)
199 KOG0199 ACK and related non-re 100.0 1.6E-37 3.4E-42 323.3 15.1 266 372-682 115-388 (1039)
200 cd05061 PTKc_InsR Catalytic do 100.0 2E-36 4.4E-41 311.8 23.3 255 373-668 12-278 (288)
201 cd05586 STKc_Sck1_like Catalyt 100.0 2E-37 4.4E-42 325.6 16.2 241 375-664 1-253 (330)
202 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-36 3.2E-41 322.9 22.9 257 373-665 27-316 (359)
203 cd06619 PKc_MKK5 Catalytic dom 100.0 2.2E-36 4.8E-41 310.0 23.3 243 373-664 7-253 (279)
204 cd06645 STKc_MAP4K3 Catalytic 100.0 1.6E-36 3.4E-41 309.1 22.0 248 372-664 14-265 (267)
205 KOG0032 Ca2+/calmodulin-depend 100.0 1.2E-36 2.6E-41 317.7 21.5 244 373-664 41-293 (382)
206 cd08227 PK_STRAD_alpha Pseudok 100.0 1.7E-36 3.8E-41 318.1 22.9 262 373-664 4-307 (327)
207 cd05056 PTKc_FAK Catalytic dom 100.0 2.5E-36 5.4E-41 308.1 23.3 251 372-670 11-267 (270)
208 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.5E-36 5.4E-41 310.4 23.5 258 373-669 10-284 (284)
209 cd05073 PTKc_Hck Catalytic dom 100.0 1.9E-36 4E-41 307.3 22.1 247 373-667 12-259 (260)
210 cd05050 PTKc_Musk Catalytic do 100.0 1.9E-36 4.2E-41 312.0 22.6 254 373-667 11-288 (288)
211 KOG0667 Dual-specificity tyros 100.0 5.3E-37 1.2E-41 322.3 18.1 256 372-664 191-502 (586)
212 cd05042 PTKc_Aatyk Catalytic d 100.0 3.3E-36 7.1E-41 307.1 23.5 255 374-666 2-268 (269)
213 PHA03207 serine/threonine kina 100.0 1.5E-36 3.3E-41 326.1 21.9 256 373-664 98-375 (392)
214 PTZ00036 glycogen synthase kin 100.0 9.1E-37 2E-41 331.6 20.4 256 372-664 71-351 (440)
215 cd06644 STKc_STK10_LOK Catalyt 100.0 4.7E-36 1E-40 309.8 24.7 246 373-664 18-269 (292)
216 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.4E-36 9.6E-41 305.9 24.1 254 374-666 2-267 (268)
217 cd06631 STKc_YSK4 Catalytic do 100.0 3.1E-36 6.7E-41 306.5 22.6 251 373-664 6-262 (265)
218 PRK13184 pknD serine/threonine 100.0 2.1E-36 4.5E-41 340.7 23.3 274 373-669 8-291 (932)
219 cd05622 STKc_ROCK1 Catalytic d 100.0 2E-36 4.4E-41 322.3 21.9 248 372-665 48-305 (371)
220 cd06625 STKc_MEKK3_like Cataly 100.0 5E-36 1.1E-40 304.6 23.6 248 372-664 7-260 (263)
221 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-36 2.9E-41 313.6 19.7 243 374-664 29-272 (292)
222 cd06637 STKc_TNIK Catalytic do 100.0 1.8E-36 3.9E-41 309.5 20.3 245 373-664 12-269 (272)
223 cd06655 STKc_PAK2 Catalytic do 100.0 3.8E-36 8.2E-41 310.9 22.9 244 373-664 25-269 (296)
224 cd06612 STKc_MST1_2 Catalytic 100.0 2.5E-36 5.4E-41 305.4 21.1 244 373-664 9-253 (256)
225 cd06613 STKc_MAP4K3_like Catal 100.0 6E-36 1.3E-40 303.7 24.0 248 373-664 9-260 (262)
226 cd08219 STKc_Nek3 Catalytic do 100.0 3.3E-36 7.2E-41 304.4 21.9 245 373-664 6-252 (255)
227 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.5E-36 9.7E-41 308.6 23.2 254 373-670 11-272 (284)
228 cd06656 STKc_PAK3 Catalytic do 100.0 2.5E-36 5.4E-41 312.4 21.3 244 373-664 25-269 (297)
229 cd06615 PKc_MEK Catalytic doma 100.0 3.5E-36 7.7E-41 313.0 22.5 258 373-665 7-288 (308)
230 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.3E-36 7.2E-41 308.4 21.9 242 373-664 10-253 (277)
231 cd07867 STKc_CDC2L6 Catalytic 100.0 4.7E-36 1E-40 313.6 23.4 199 373-597 7-218 (317)
232 cd07874 STKc_JNK3 Catalytic do 100.0 1.9E-36 4.1E-41 321.7 20.7 255 373-664 23-311 (355)
233 cd05057 PTKc_EGFR_like Catalyt 100.0 8.8E-36 1.9E-40 305.6 24.9 251 373-670 13-270 (279)
234 cd06611 STKc_SLK_like Catalyti 100.0 3.6E-36 7.8E-41 308.7 22.0 246 373-664 11-262 (280)
235 PHA03209 serine/threonine kina 100.0 3E-36 6.5E-41 319.7 21.8 185 372-595 71-256 (357)
236 cd05110 PTKc_HER4 Catalytic do 100.0 6.4E-36 1.4E-40 310.4 23.7 254 373-673 13-273 (303)
237 cd06659 STKc_PAK6 Catalytic do 100.0 2.6E-36 5.6E-41 312.2 20.5 243 374-664 28-271 (297)
238 KOG0584 Serine/threonine prote 100.0 3.9E-37 8.4E-42 320.0 14.2 241 373-664 46-296 (632)
239 KOG0596 Dual specificity; seri 100.0 5.2E-37 1.1E-41 312.9 14.3 248 372-664 366-627 (677)
240 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.8E-36 6.1E-41 312.9 19.9 258 373-664 12-286 (301)
241 cd08223 STKc_Nek4 Catalytic do 100.0 1.1E-35 2.4E-40 300.9 23.4 245 373-664 6-254 (257)
242 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-35 2.6E-40 302.6 23.8 249 373-664 6-264 (267)
243 cd07875 STKc_JNK1 Catalytic do 100.0 3.9E-36 8.4E-41 320.3 21.0 255 373-664 30-318 (364)
244 cd05597 STKc_DMPK_like Catalyt 100.0 3.1E-36 6.8E-41 316.5 20.0 249 373-664 7-266 (331)
245 cd07863 STKc_CDK4 Catalytic do 100.0 6.6E-36 1.4E-40 308.0 21.9 258 373-664 6-285 (288)
246 cd05083 PTKc_Chk Catalytic dom 100.0 8.4E-36 1.8E-40 301.3 22.0 242 372-667 11-253 (254)
247 cd07861 STKc_CDK1_euk Catalyti 100.0 9.6E-36 2.1E-40 306.3 22.6 259 373-664 6-282 (285)
248 cd05046 PTK_CCK4 Pseudokinase 100.0 9.2E-36 2E-40 304.8 22.3 253 374-667 12-275 (275)
249 cd06640 STKc_MST4 Catalytic do 100.0 2E-35 4.3E-40 302.6 24.8 243 373-665 10-254 (277)
250 cd08221 STKc_Nek9 Catalytic do 100.0 1.4E-35 3.1E-40 300.0 23.2 246 373-665 6-254 (256)
251 PTZ00284 protein kinase; Provi 100.0 4.5E-36 9.9E-41 329.8 20.7 254 373-664 135-438 (467)
252 cd05623 STKc_MRCK_alpha Cataly 100.0 3.5E-36 7.7E-41 316.3 19.0 249 373-664 7-266 (332)
253 PTZ00266 NIMA-related protein 100.0 6.7E-36 1.4E-40 337.8 22.3 248 373-663 19-294 (1021)
254 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.3E-35 2.7E-40 303.4 22.4 255 373-668 5-272 (273)
255 PF00069 Pkinase: Protein kina 100.0 2.5E-36 5.4E-41 306.1 17.0 249 373-664 5-257 (260)
256 cd05627 STKc_NDR2 Catalytic do 100.0 2.4E-36 5.1E-41 321.3 17.5 266 373-664 7-293 (360)
257 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.2E-36 1.1E-40 316.8 20.0 251 373-664 21-298 (343)
258 cd08218 STKc_Nek1 Catalytic do 100.0 1.2E-35 2.6E-40 300.6 21.2 245 373-664 6-253 (256)
259 cd07839 STKc_CDK5 Catalytic do 100.0 4.8E-36 1E-40 308.4 18.6 259 373-664 6-281 (284)
260 cd05624 STKc_MRCK_beta Catalyt 100.0 4.3E-36 9.3E-41 315.4 18.4 249 373-664 7-266 (331)
261 cd06609 STKc_MST3_like Catalyt 100.0 1.9E-35 4.1E-40 302.3 22.7 243 373-664 7-251 (274)
262 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.7E-35 5.8E-40 303.1 23.8 258 373-664 7-283 (286)
263 KOG4717 Serine/threonine prote 100.0 2.9E-36 6.3E-41 303.8 15.9 241 374-664 25-270 (864)
264 cd06648 STKc_PAK_II Catalytic 100.0 2.4E-35 5.3E-40 303.2 23.1 244 373-664 25-269 (285)
265 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2E-35 4.4E-40 304.1 22.3 248 373-664 7-262 (286)
266 KOG1025 Epidermal growth facto 100.0 2.7E-36 5.9E-41 319.3 15.9 252 371-669 700-958 (1177)
267 cd05577 STKc_GRK Catalytic dom 100.0 2.7E-35 5.9E-40 301.6 23.0 245 375-664 1-254 (277)
268 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-35 3.9E-40 301.4 21.5 251 373-664 6-264 (268)
269 KOG4250 TANK binding protein k 100.0 1.8E-36 4E-41 318.7 14.4 264 372-666 18-308 (732)
270 cd06638 STKc_myosinIIIA Cataly 100.0 1.2E-35 2.7E-40 305.7 20.3 249 373-665 24-284 (286)
271 cd06651 STKc_MEKK3 Catalytic d 100.0 2.7E-35 6E-40 299.7 22.2 246 373-664 8-261 (266)
272 cd07844 STKc_PCTAIRE_like Cata 100.0 1.5E-35 3.2E-40 305.9 20.4 259 373-664 11-288 (291)
273 smart00219 TyrKc Tyrosine kina 100.0 5E-35 1.1E-39 296.1 23.8 247 373-665 5-258 (258)
274 cd06632 STKc_MEKK1_plant Catal 100.0 2.8E-35 6.1E-40 298.0 21.8 243 373-664 6-255 (258)
275 cd05574 STKc_phototropin_like 100.0 3.5E-35 7.6E-40 306.9 23.0 266 373-664 7-289 (316)
276 cd08528 STKc_Nek10 Catalytic d 100.0 3.8E-35 8.3E-40 299.2 22.5 251 373-667 6-269 (269)
277 cd06607 STKc_TAO Catalytic dom 100.0 5.7E-35 1.2E-39 303.9 24.2 241 373-665 21-268 (307)
278 cd05580 STKc_PKA Catalytic dom 100.0 4.1E-35 8.8E-40 302.4 22.9 239 373-664 7-254 (290)
279 cd05633 STKc_GRK3 Catalytic do 100.0 4.9E-35 1.1E-39 299.9 23.2 242 374-664 1-255 (279)
280 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.8E-35 1.2E-39 300.8 23.7 256 373-664 7-266 (287)
281 cd06657 STKc_PAK4 Catalytic do 100.0 4E-35 8.7E-40 302.5 22.5 244 373-664 26-270 (292)
282 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.4E-35 2.9E-40 305.3 18.8 258 373-664 7-283 (286)
283 KOG0607 MAP kinase-interacting 100.0 8.3E-36 1.8E-40 284.7 15.7 268 363-664 74-361 (463)
284 cd07860 STKc_CDK2_3 Catalytic 100.0 2.6E-35 5.6E-40 302.9 20.7 258 373-664 6-281 (284)
285 cd06647 STKc_PAK_I Catalytic d 100.0 2.9E-35 6.3E-40 303.8 21.0 244 373-664 25-269 (293)
286 cd08220 STKc_Nek8 Catalytic do 100.0 6.4E-35 1.4E-39 295.1 23.0 244 373-664 6-253 (256)
287 cd06641 STKc_MST3 Catalytic do 100.0 7.6E-35 1.6E-39 298.3 23.9 242 373-664 10-253 (277)
288 cd06639 STKc_myosinIIIB Cataly 100.0 2.9E-35 6.4E-40 303.7 20.8 248 373-664 28-287 (291)
289 cd06605 PKc_MAPKK Catalytic do 100.0 3.7E-35 7.9E-40 298.6 21.0 249 373-664 7-257 (265)
290 cd05572 STKc_cGK_PKG Catalytic 100.0 7.1E-35 1.5E-39 296.0 22.9 242 375-663 1-251 (262)
291 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.4E-35 9.4E-40 302.4 21.5 259 373-664 11-288 (291)
292 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.7E-35 1.5E-39 297.9 22.7 250 373-664 7-269 (272)
293 cd06652 STKc_MEKK2 Catalytic d 100.0 7.9E-35 1.7E-39 296.2 23.0 247 372-664 7-261 (265)
294 cd07841 STKc_CDK7 Catalytic do 100.0 3.1E-35 6.6E-40 304.7 20.2 258 373-664 6-282 (298)
295 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.5E-35 5.3E-40 302.8 19.3 245 373-664 22-279 (282)
296 cd05609 STKc_MAST Catalytic do 100.0 8.3E-35 1.8E-39 302.4 23.5 263 373-667 7-273 (305)
297 cd08217 STKc_Nek2 Catalytic do 100.0 6.4E-35 1.4E-39 296.4 22.0 250 373-664 6-262 (265)
298 cd07832 STKc_CCRK Catalytic do 100.0 7.3E-35 1.6E-39 299.9 22.6 259 373-664 6-282 (286)
299 KOG0690 Serine/threonine prote 100.0 7.8E-36 1.7E-40 285.3 13.8 263 373-685 174-445 (516)
300 cd07833 STKc_CDKL Catalytic do 100.0 4.7E-35 1E-39 301.6 20.8 259 373-664 7-285 (288)
301 cd06610 STKc_OSR1_SPAK Catalyt 100.0 9.2E-35 2E-39 295.8 22.5 255 373-664 7-264 (267)
302 cd06917 STKc_NAK1_like Catalyt 100.0 6.7E-35 1.4E-39 298.8 21.3 243 373-664 7-255 (277)
303 PHA03390 pk1 serine/threonine- 100.0 1E-34 2.2E-39 295.6 22.4 235 375-664 24-262 (267)
304 cd06635 STKc_TAO1 Catalytic do 100.0 2.3E-34 4.9E-39 300.7 25.3 244 373-668 31-281 (317)
305 cd06626 STKc_MEKK4 Catalytic d 100.0 1.5E-34 3.2E-39 293.9 23.2 250 373-664 6-261 (264)
306 cd06617 PKc_MKK3_6 Catalytic d 100.0 5E-35 1.1E-39 300.6 19.8 247 373-664 7-261 (283)
307 cd06614 STKc_PAK Catalytic dom 100.0 1.7E-34 3.6E-39 297.3 23.4 246 373-665 25-271 (286)
308 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-36 2.3E-41 337.6 7.3 249 372-665 1240-1495(1509)
309 cd07843 STKc_CDC2L1 Catalytic 100.0 1E-34 2.2E-39 300.0 21.5 258 373-664 11-290 (293)
310 KOG0983 Mitogen-activated prot 100.0 1.6E-35 3.5E-40 277.1 13.6 245 374-664 99-349 (391)
311 cd08216 PK_STRAD Pseudokinase 100.0 2E-34 4.3E-39 301.0 23.5 262 375-664 10-295 (314)
312 cd06608 STKc_myosinIII_like Ca 100.0 7.7E-35 1.7E-39 297.7 20.0 248 373-664 12-272 (275)
313 cd05606 STKc_beta_ARK Catalyti 100.0 2.5E-34 5.4E-39 294.6 23.8 242 374-664 1-255 (278)
314 cd08226 PK_STRAD_beta Pseudoki 100.0 2.5E-34 5.4E-39 301.9 24.3 261 375-664 6-308 (328)
315 cd08225 STKc_Nek5 Catalytic do 100.0 8.7E-35 1.9E-39 294.3 19.8 245 373-664 6-254 (257)
316 cd05578 STKc_Yank1 Catalytic d 100.0 5.7E-35 1.2E-39 296.0 18.2 242 373-662 6-253 (258)
317 cd06616 PKc_MKK4 Catalytic dom 100.0 9.2E-35 2E-39 299.5 20.0 249 373-664 10-267 (288)
318 cd05613 STKc_MSK1_N N-terminal 100.0 2.4E-34 5.3E-39 296.7 23.1 265 373-684 6-288 (290)
319 cd07835 STKc_CDK1_like Catalyt 100.0 1.7E-34 3.7E-39 296.7 21.8 255 373-664 5-280 (283)
320 cd05579 STKc_MAST_like Catalyt 100.0 1.2E-34 2.5E-39 294.6 20.2 252 375-666 1-256 (265)
321 PHA02882 putative serine/threo 100.0 2.1E-34 4.5E-39 297.5 22.2 254 373-666 18-294 (294)
322 KOG0986 G protein-coupled rece 100.0 1E-35 2.2E-40 296.5 11.7 242 373-659 191-436 (591)
323 cd05611 STKc_Rim15_like Cataly 100.0 3.3E-34 7.1E-39 290.7 22.4 242 374-665 3-249 (260)
324 cd06623 PKc_MAPKK_plant_like C 100.0 3.4E-34 7.4E-39 291.1 22.5 248 373-664 7-256 (264)
325 cd05583 STKc_MSK_N N-terminal 100.0 2.9E-34 6.4E-39 295.8 22.1 251 373-668 6-267 (288)
326 KOG1035 eIF-2alpha kinase GCN2 100.0 4.9E-35 1.1E-39 323.1 17.1 257 374-664 486-871 (1351)
327 cd07831 STKc_MOK Catalytic dom 100.0 4.6E-34 9.9E-39 293.3 22.9 256 373-664 5-279 (282)
328 cd07845 STKc_CDK10 Catalytic d 100.0 3.3E-34 7E-39 298.6 21.9 258 373-664 13-290 (309)
329 cd05122 PKc_STE Catalytic doma 100.0 5.4E-34 1.2E-38 287.2 22.7 245 373-664 6-251 (253)
330 KOG0666 Cyclin C-dependent kin 100.0 3E-35 6.4E-40 280.1 12.6 268 373-665 30-338 (438)
331 KOG0586 Serine/threonine prote 100.0 5.8E-35 1.3E-39 303.6 15.7 240 374-664 63-306 (596)
332 cd07840 STKc_CDK9_like Catalyt 100.0 3.4E-34 7.4E-39 294.9 21.5 258 373-664 5-284 (287)
333 cd07837 STKc_CdkB_plant Cataly 100.0 4.6E-34 1E-38 295.4 21.9 259 373-664 7-291 (295)
334 cd07850 STKc_JNK Catalytic dom 100.0 5E-34 1.1E-38 302.7 22.6 254 373-664 22-311 (353)
335 cd06627 STKc_Cdc7_like Catalyt 100.0 9.3E-34 2E-38 286.1 23.5 242 373-663 6-250 (254)
336 cd07836 STKc_Pho85 Catalytic d 100.0 5.1E-34 1.1E-38 293.3 21.9 259 373-664 6-281 (284)
337 PTZ00024 cyclin-dependent prot 100.0 3.9E-34 8.4E-39 301.5 21.3 271 373-664 15-313 (335)
338 KOG0604 MAP kinase-activated p 100.0 3.2E-35 6.9E-40 278.7 11.4 247 372-664 67-322 (400)
339 cd07849 STKc_ERK1_2_like Catal 100.0 2.1E-34 4.5E-39 303.6 18.9 265 373-670 11-300 (336)
340 cd07865 STKc_CDK9 Catalytic do 100.0 6.3E-34 1.4E-38 296.5 22.1 262 373-664 18-307 (310)
341 PLN00009 cyclin-dependent kina 100.0 5.4E-34 1.2E-38 294.7 21.3 256 373-664 8-284 (294)
342 cd07852 STKc_MAPK15 Catalytic 100.0 6.9E-34 1.5E-38 299.8 22.2 283 372-685 12-319 (337)
343 cd06606 STKc_MAPKKK Catalytic 100.0 1.1E-33 2.4E-38 286.2 22.8 247 373-664 6-257 (260)
344 cd06634 STKc_TAO2 Catalytic do 100.0 1.2E-33 2.7E-38 293.9 23.7 243 373-667 21-270 (308)
345 PHA03210 serine/threonine kina 100.0 1.9E-34 4E-39 318.2 18.0 264 373-664 154-454 (501)
346 KOG1006 Mitogen-activated prot 100.0 4.7E-36 1E-40 279.9 4.3 252 374-664 71-327 (361)
347 cd06633 STKc_TAO3 Catalytic do 100.0 1.6E-33 3.5E-38 293.6 23.9 240 373-664 27-273 (313)
348 cd05118 STKc_CMGC Catalytic do 100.0 6.3E-34 1.4E-38 292.4 20.2 258 373-664 5-280 (283)
349 cd07842 STKc_CDK8_like Catalyt 100.0 4.4E-34 9.5E-39 298.6 19.3 267 373-664 6-313 (316)
350 KOG0200 Fibroblast/platelet-de 100.0 4.3E-34 9.3E-39 319.9 20.4 269 359-668 290-579 (609)
351 cd07838 STKc_CDK4_6_like Catal 100.0 2.3E-33 4.9E-38 288.9 23.6 255 373-664 5-284 (287)
352 cd07855 STKc_ERK5 Catalytic do 100.0 4.6E-34 9.9E-39 300.7 18.4 259 373-664 11-294 (334)
353 cd06618 PKc_MKK7 Catalytic dom 100.0 6.4E-34 1.4E-38 294.4 19.0 248 372-665 20-274 (296)
354 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-33 3.6E-38 283.7 21.4 236 375-660 1-240 (250)
355 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.2E-34 1.8E-38 299.1 20.0 267 373-676 11-305 (337)
356 cd08530 STKc_CNK2-like Catalyt 100.0 1.4E-33 3E-38 285.3 20.2 245 373-664 6-253 (256)
357 cd07834 STKc_MAPK Catalytic do 100.0 1.8E-33 3.9E-38 295.9 21.9 264 373-671 6-298 (330)
358 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.1E-33 6.7E-38 284.3 22.9 247 372-664 7-261 (264)
359 cd07830 STKc_MAK_like Catalyti 100.0 1.3E-33 2.9E-38 290.0 20.4 258 373-664 5-280 (283)
360 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-33 3.1E-38 289.2 20.3 262 373-664 7-277 (280)
361 cd08215 STKc_Nek Catalytic dom 100.0 2.4E-33 5.2E-38 283.6 21.4 247 373-664 6-255 (258)
362 cd07864 STKc_CDK12 Catalytic d 100.0 2.8E-33 6.2E-38 290.5 21.7 259 373-664 13-299 (302)
363 cd07879 STKc_p38delta_MAPK13 C 100.0 1.7E-33 3.6E-38 297.2 20.0 255 373-670 21-305 (342)
364 cd07829 STKc_CDK_like Catalyti 100.0 3.8E-33 8.2E-38 286.4 21.1 258 373-664 5-279 (282)
365 KOG0662 Cyclin-dependent kinas 100.0 1.5E-33 3.2E-38 248.1 15.2 254 374-664 9-283 (292)
366 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.3E-33 7.1E-38 295.1 20.5 250 373-664 21-298 (343)
367 KOG0612 Rho-associated, coiled 100.0 3.6E-34 7.8E-39 313.8 13.3 246 373-666 81-340 (1317)
368 cd07866 STKc_BUR1 Catalytic do 100.0 5.2E-33 1.1E-37 289.7 21.4 267 373-664 14-308 (311)
369 cd08222 STKc_Nek11 Catalytic d 100.0 3.4E-33 7.4E-38 283.2 19.1 246 373-664 6-257 (260)
370 cd05610 STKc_MASTL Catalytic d 100.0 1E-32 2.2E-37 313.7 24.8 141 373-522 10-154 (669)
371 cd07857 STKc_MPK1 Catalytic do 100.0 6.1E-33 1.3E-37 291.9 20.8 259 373-664 6-292 (332)
372 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.3E-33 1.1E-37 293.4 19.5 255 373-664 11-300 (342)
373 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1E-32 2.3E-37 289.2 21.1 259 373-670 16-296 (328)
374 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.6E-33 1.9E-37 292.1 20.5 251 373-664 23-300 (345)
375 cd05576 STKc_RPK118_like Catal 100.0 5.2E-33 1.1E-37 277.7 17.7 220 378-659 4-224 (237)
376 KOG0669 Cyclin T-dependent kin 100.0 1.2E-34 2.6E-39 268.2 4.8 262 374-665 24-316 (376)
377 KOG4236 Serine/threonine prote 100.0 6.1E-34 1.3E-38 287.7 10.3 255 362-664 558-819 (888)
378 cd07851 STKc_p38 Catalytic dom 100.0 5.3E-33 1.2E-37 293.6 17.5 248 373-664 21-298 (343)
379 KOG1024 Receptor-like protein 100.0 1.6E-32 3.5E-37 268.8 18.3 257 373-670 290-557 (563)
380 KOG1151 Tousled-like protein k 100.0 2.3E-33 5.1E-38 278.2 10.4 257 373-664 469-741 (775)
381 KOG0587 Traf2- and Nck-interac 100.0 2.2E-32 4.7E-37 293.4 18.2 246 373-664 25-282 (953)
382 KOG0696 Serine/threonine prote 100.0 6.4E-33 1.4E-37 273.0 11.2 235 372-656 354-593 (683)
383 KOG0671 LAMMER dual specificit 100.0 6.1E-33 1.3E-37 272.5 10.4 252 374-664 96-406 (415)
384 KOG0603 Ribosomal protein S6 k 100.0 1.5E-32 3.2E-37 287.3 13.7 232 374-664 329-563 (612)
385 KOG0984 Mitogen-activated prot 100.0 4.4E-32 9.5E-37 244.4 12.0 201 372-601 51-258 (282)
386 KOG1027 Serine/threonine prote 100.0 6.5E-33 1.4E-37 296.0 7.2 247 371-664 513-767 (903)
387 smart00220 S_TKc Serine/Threon 100.0 6.7E-31 1.5E-35 262.8 21.3 238 379-663 1-240 (244)
388 PLN03224 probable serine/threo 100.0 5.4E-31 1.2E-35 284.4 20.9 256 372-664 150-500 (507)
389 PLN03225 Serine/threonine-prot 100.0 4.2E-31 9E-36 293.0 18.2 257 373-664 138-450 (566)
390 KOG0614 cGMP-dependent protein 100.0 5.8E-32 1.2E-36 272.8 7.0 242 374-664 427-677 (732)
391 KOG0695 Serine/threonine prote 100.0 7.5E-31 1.6E-35 252.0 13.8 267 373-684 256-536 (593)
392 KOG0668 Casein kinase II, alph 100.0 2.7E-30 5.9E-35 236.2 13.8 252 374-664 45-322 (338)
393 KOG0664 Nemo-like MAPK-related 100.0 7.4E-32 1.6E-36 252.3 3.2 259 374-666 60-345 (449)
394 KOG0608 Warts/lats-like serine 100.0 3.5E-30 7.7E-35 265.7 14.4 219 374-601 636-877 (1034)
395 KOG0665 Jun-N-terminal kinase 100.0 2E-29 4.4E-34 242.1 11.6 251 374-665 24-311 (369)
396 cd00180 PKc Catalytic domain o 100.0 5.8E-28 1.3E-32 235.6 21.1 211 375-665 1-215 (215)
397 KOG1345 Serine/threonine kinas 100.0 1.9E-28 4.1E-33 229.7 12.9 247 372-665 29-285 (378)
398 KOG1290 Serine/threonine prote 100.0 6.9E-28 1.5E-32 243.1 17.4 126 373-506 84-222 (590)
399 KOG1152 Signal transduction se 100.0 5.1E-29 1.1E-33 255.4 9.3 190 373-596 567-770 (772)
400 KOG0576 Mitogen-activated prot 100.0 2.7E-29 5.8E-34 261.6 6.4 245 374-663 22-270 (829)
401 KOG1167 Serine/threonine prote 99.9 4.3E-28 9.3E-33 241.9 9.5 279 372-664 41-381 (418)
402 KOG0670 U4/U6-associated splic 99.9 4.1E-28 8.8E-33 245.7 8.8 256 374-664 439-746 (752)
403 smart00221 STYKc Protein kinas 99.9 1.2E-26 2.6E-31 229.3 19.2 195 373-597 5-202 (225)
404 PLN00181 protein SPA1-RELATED; 99.9 4.9E-27 1.1E-31 273.9 12.3 213 418-664 27-265 (793)
405 PLN00113 leucine-rich repeat r 99.9 4.1E-26 8.9E-31 273.7 18.6 226 12-242 23-271 (968)
406 smart00750 KIND kinase non-cat 99.9 5.8E-26 1.3E-30 215.7 14.6 168 448-669 1-170 (176)
407 KOG0195 Integrin-linked kinase 99.9 3.6E-25 7.8E-30 207.5 8.3 256 360-669 185-447 (448)
408 PRK09188 serine/threonine prot 99.9 6E-23 1.3E-27 212.9 14.5 163 373-570 24-195 (365)
409 KOG1164 Casein kinase (serine/ 99.9 2.1E-21 4.5E-26 202.4 21.3 263 373-669 24-298 (322)
410 COG0515 SPS1 Serine/threonine 99.9 1.1E-20 2.4E-25 197.9 23.8 260 374-664 7-275 (384)
411 KOG0590 Checkpoint kinase and 99.9 9.1E-23 2E-27 225.5 5.9 254 372-663 323-584 (601)
412 KOG1165 Casein kinase (serine/ 99.9 1.2E-20 2.5E-25 182.5 17.7 202 372-600 33-241 (449)
413 cd05147 RIO1_euk RIO kinase fa 99.9 2E-21 4.3E-26 185.5 11.2 138 373-522 3-167 (190)
414 KOG1163 Casein kinase (serine/ 99.8 8E-21 1.7E-25 175.8 13.4 199 374-599 22-225 (341)
415 PRK10359 lipopolysaccharide co 99.8 6.3E-21 1.4E-25 183.7 10.1 164 372-589 36-216 (232)
416 KOG1023 Natriuretic peptide re 99.8 1.2E-20 2.5E-25 198.9 13.0 219 417-671 1-227 (484)
417 KOG0617 Ras suppressor protein 99.8 2.9E-22 6.4E-27 175.8 -1.1 177 56-244 32-212 (264)
418 KOG0603 Ribosomal protein S6 k 99.8 3.7E-21 8.1E-26 202.1 4.7 225 374-658 1-232 (612)
419 PRK12274 serine/threonine prot 99.8 6.5E-20 1.4E-24 172.5 12.5 194 373-597 8-209 (218)
420 cd05145 RIO1_like RIO kinase f 99.8 1.1E-19 2.4E-24 174.3 13.8 138 374-523 4-168 (190)
421 PRK10345 hypothetical protein; 99.8 1.7E-19 3.6E-24 173.6 13.5 134 373-520 8-158 (210)
422 PLN03150 hypothetical protein; 99.8 2.6E-19 5.6E-24 201.3 16.7 137 15-173 369-510 (623)
423 KOG1240 Protein kinase contain 99.8 1.4E-20 3E-25 207.1 6.1 250 373-667 29-294 (1431)
424 PF14531 Kinase-like: Kinase-l 99.8 1.3E-18 2.7E-23 172.8 10.6 229 373-655 18-288 (288)
425 KOG4158 BRPK/PTEN-induced prot 99.8 4.5E-18 9.7E-23 168.3 13.0 201 421-665 274-511 (598)
426 PRK14879 serine/threonine prot 99.7 1.7E-17 3.7E-22 162.4 14.4 133 374-521 3-143 (211)
427 smart00090 RIO RIO-like kinase 99.7 1.5E-17 3.2E-22 164.3 12.9 137 372-522 33-198 (237)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 2.7E-17 5.9E-22 159.4 13.1 130 374-521 1-138 (199)
429 KOG1166 Mitotic checkpoint ser 99.7 1.7E-17 3.8E-22 186.9 12.9 189 372-593 703-901 (974)
430 PRK09605 bifunctional UGMP fam 99.7 6.5E-17 1.4E-21 180.2 14.3 133 372-522 338-477 (535)
431 cd05144 RIO2_C RIO kinase fami 99.7 1E-16 2.2E-21 155.0 12.8 132 372-522 20-175 (198)
432 KOG4194 Membrane glycoprotein 99.7 1.9E-18 4E-23 178.5 0.3 194 51-250 263-458 (873)
433 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.1E-17 2.4E-22 172.8 5.6 180 437-662 330-510 (516)
434 KOG4237 Extracellular matrix p 99.7 4E-18 8.7E-23 168.7 1.3 193 57-249 67-364 (498)
435 KOG0606 Microtubule-associated 99.7 1.1E-16 2.5E-21 176.6 8.2 212 372-656 88-304 (1205)
436 KOG0617 Ras suppressor protein 99.7 5.1E-18 1.1E-22 149.3 -2.7 161 77-248 29-190 (264)
437 PRK01723 3-deoxy-D-manno-octul 99.6 1.5E-15 3.3E-20 150.3 14.3 137 370-521 34-191 (239)
438 KOG4194 Membrane glycoprotein 99.6 6.7E-17 1.4E-21 167.1 2.0 164 58-228 174-337 (873)
439 KOG0472 Leucine-rich repeat pr 99.6 9.7E-18 2.1E-22 166.1 -4.3 173 58-244 138-310 (565)
440 cd05120 APH_ChoK_like Aminogly 99.6 3.9E-15 8.4E-20 137.1 12.2 133 374-522 5-139 (155)
441 KOG0444 Cytoskeletal regulator 99.6 6.5E-17 1.4E-21 168.0 0.1 166 73-249 214-380 (1255)
442 KOG0590 Checkpoint kinase and 99.6 7.9E-17 1.7E-21 178.5 -0.3 248 374-663 27-285 (601)
443 KOG0444 Cytoskeletal regulator 99.6 1.1E-16 2.3E-21 166.4 -1.1 155 57-222 32-187 (1255)
444 cd05119 RIO RIO kinase family, 99.6 1.1E-14 2.3E-19 139.7 11.9 135 373-522 3-164 (187)
445 KOG0618 Serine/threonine phosp 99.6 4E-16 8.6E-21 169.8 0.1 184 56-244 240-489 (1081)
446 KOG0472 Leucine-rich repeat pr 99.5 1.5E-15 3.1E-20 150.9 -2.0 152 58-221 389-541 (565)
447 TIGR01982 UbiB 2-polyprenylphe 99.5 1.3E-13 2.8E-18 148.5 11.8 140 373-523 123-308 (437)
448 KOG1266 Protein kinase [Signal 99.5 6.3E-14 1.4E-18 136.2 6.6 211 415-667 119-334 (458)
449 KOG0601 Cyclin-dependent kinas 99.4 4.5E-13 9.8E-18 141.8 7.9 248 371-663 118-378 (524)
450 KOG0532 Leucine-rich repeat (L 99.4 1.7E-14 3.7E-19 149.4 -4.7 148 62-224 103-250 (722)
451 PRK15387 E3 ubiquitin-protein 99.4 8.8E-13 1.9E-17 148.3 8.3 159 58-244 283-458 (788)
452 PRK15370 E3 ubiquitin-protein 99.3 3.5E-12 7.6E-17 144.5 11.4 146 53-223 174-319 (754)
453 PRK15370 E3 ubiquitin-protein 99.3 1.2E-12 2.6E-17 148.2 7.2 119 57-191 241-359 (754)
454 PRK15387 E3 ubiquitin-protein 99.3 2.5E-12 5.5E-17 144.7 9.6 161 56-243 241-434 (788)
455 KOG0532 Leucine-rich repeat (L 99.3 1.2E-13 2.6E-18 143.2 -0.9 172 58-244 76-247 (722)
456 cd05151 ChoK Choline Kinase (C 99.3 1.1E-11 2.4E-16 116.6 11.6 128 374-520 5-135 (170)
457 PRK04750 ubiB putative ubiquin 99.3 5E-12 1.1E-16 137.5 10.4 141 374-524 126-316 (537)
458 PLN03150 hypothetical protein; 99.3 8.7E-12 1.9E-16 140.6 8.2 119 106-253 419-537 (623)
459 cd05146 RIO3_euk RIO kinase fa 99.3 6.3E-11 1.4E-15 112.0 12.6 134 374-522 4-174 (197)
460 KOG1243 Protein kinase [Genera 99.2 1.3E-10 2.8E-15 124.4 15.8 168 388-593 34-201 (690)
461 PLN03210 Resistant to P. syrin 99.2 4E-11 8.6E-16 145.1 12.4 105 57-164 611-715 (1153)
462 COG3642 Mn2+-dependent serine/ 99.2 2.5E-10 5.4E-15 103.8 13.3 130 374-521 3-140 (204)
463 cd00116 LRR_RI Leucine-rich re 99.2 3.3E-12 7.1E-17 133.6 0.1 187 56-244 80-291 (319)
464 cd05154 ACAD10_11_like Acyl-Co 99.2 2E-10 4.3E-15 113.2 12.6 141 374-521 5-206 (223)
465 KOG1259 Nischarin, modulator o 99.2 5.2E-12 1.1E-16 121.3 0.5 138 75-225 278-416 (490)
466 cd00116 LRR_RI Leucine-rich re 99.2 4.7E-12 1E-16 132.3 0.2 180 57-243 51-262 (319)
467 KOG0618 Serine/threonine phosp 99.2 4.3E-12 9.2E-17 138.9 -0.6 179 57-247 219-446 (1081)
468 PLN03210 Resistant to P. syrin 99.1 1.6E-10 3.4E-15 140.0 12.2 190 49-244 627-882 (1153)
469 KOG0601 Cyclin-dependent kinas 99.1 5.7E-11 1.2E-15 126.0 5.8 241 374-669 272-519 (524)
470 PF14580 LRR_9: Leucine-rich r 99.1 1.1E-10 2.4E-15 108.1 5.4 126 77-207 15-145 (175)
471 KOG3087 Serine/threonine prote 99.1 1.3E-09 2.9E-14 98.5 11.9 139 374-520 14-164 (229)
472 COG4886 Leucine-rich repeat (L 99.1 1.1E-10 2.4E-15 125.7 6.2 173 58-244 117-290 (394)
473 KOG0606 Microtubule-associated 99.0 1.1E-10 2.3E-15 130.1 4.4 261 374-659 811-1084(1205)
474 PF14580 LRR_9: Leucine-rich r 99.0 1.2E-10 2.6E-15 107.9 3.6 122 88-221 4-126 (175)
475 COG4886 Leucine-rich repeat (L 99.0 1.1E-10 2.4E-15 125.7 3.1 158 58-229 141-298 (394)
476 PRK15123 lipopolysaccharide co 99.0 5.5E-09 1.2E-13 104.7 14.4 140 374-521 29-194 (268)
477 KOG4237 Extracellular matrix p 99.0 1.2E-10 2.5E-15 116.3 2.4 123 66-192 55-178 (498)
478 PF01163 RIO1: RIO1 family; I 99.0 2.8E-09 6E-14 100.5 11.2 124 382-521 1-155 (188)
479 KOG1259 Nischarin, modulator o 99.0 4.9E-11 1.1E-15 114.7 -0.7 132 57-194 284-415 (490)
480 KOG3741 Poly(A) ribonuclease s 98.9 7.2E-08 1.6E-12 100.3 17.3 171 380-593 289-474 (655)
481 KOG3207 Beta-tubulin folding c 98.9 4E-10 8.7E-15 114.1 -0.0 164 58-221 147-314 (505)
482 COG0478 RIO-like serine/threon 98.8 3.5E-08 7.6E-13 95.4 11.4 133 370-520 94-250 (304)
483 PF13855 LRR_8: Leucine rich r 98.8 3.8E-09 8.2E-14 80.4 2.9 59 82-140 2-60 (61)
484 COG4248 Uncharacterized protei 98.8 3.5E-07 7.5E-12 92.9 17.0 263 374-672 18-304 (637)
485 PF08263 LRRNT_2: Leucine rich 98.7 1.1E-08 2.3E-13 71.3 3.5 40 16-55 1-43 (43)
486 PF13855 LRR_8: Leucine rich r 98.7 1.7E-08 3.8E-13 76.7 3.8 60 58-117 2-61 (61)
487 COG0661 AarF Predicted unusual 98.7 6.7E-08 1.5E-12 104.8 9.3 149 364-524 121-317 (517)
488 PF06293 Kdo: Lipopolysacchari 98.6 2.7E-07 6E-12 89.4 12.1 107 407-522 55-171 (206)
489 PRK09902 hypothetical protein; 98.6 8.8E-07 1.9E-11 84.0 14.6 138 376-521 27-179 (216)
490 KOG1859 Leucine-rich repeat pr 98.6 2.2E-09 4.8E-14 114.8 -3.4 161 74-247 102-295 (1096)
491 KOG2137 Protein kinase [Signal 98.5 5.3E-08 1.1E-12 105.1 2.6 159 475-663 105-264 (700)
492 KOG3207 Beta-tubulin folding c 98.5 3E-08 6.4E-13 100.8 0.4 160 56-221 171-339 (505)
493 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2.2E-06 4.8E-11 84.2 13.4 141 374-520 8-181 (226)
494 KOG4579 Leucine-rich repeat (L 98.4 3E-08 6.4E-13 85.0 -0.6 133 60-198 30-166 (177)
495 KOG1859 Leucine-rich repeat pr 98.4 6.1E-09 1.3E-13 111.5 -5.9 126 59-191 166-292 (1096)
496 KOG4579 Leucine-rich repeat (L 98.3 1.1E-07 2.3E-12 81.7 0.0 132 83-226 29-164 (177)
497 KOG0531 Protein phosphatase 1, 98.3 3.9E-07 8.5E-12 98.5 3.1 126 57-191 95-221 (414)
498 cd05150 APH Aminoglycoside 3'- 98.2 1.2E-05 2.6E-10 80.4 12.8 75 375-453 6-82 (244)
499 KOG1235 Predicted unusual prot 98.2 8.7E-06 1.9E-10 88.2 11.4 141 373-523 167-356 (538)
500 COG1718 RIO1 Serine/threonine 98.1 2.3E-05 5.1E-10 75.4 11.2 135 374-522 55-216 (268)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.8e-65 Score=607.58 Aligned_cols=522 Identities=28% Similarity=0.479 Sum_probs=356.3
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCC-----------------------CCCcEEEccC
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNA-----------------------SNLQSLILSG 114 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l-----------------------~~L~~L~L~~ 114 (686)
.++.|+|++|+++|.+|..+..++.|+.|+|++|.++|.+|..+..+ ++|+.|+|++
T Consensus 405 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~ 484 (968)
T PLN00113 405 SLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSR 484 (968)
T ss_pred CCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcC
Confidence 45566666666666666666666666666666666655555544444 4555566666
Q ss_pred CCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCC
Q 042348 115 NSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLI 194 (686)
Q Consensus 115 N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 194 (686)
|++++.+|..+..+++|+.|+|++|++++.+|..+..+++|++|+|++|+++|.+|..+. .+++|+.|||++|+++|.+
T Consensus 485 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~ 563 (968)
T PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFS-EMPVLSQLDLSQNQLSGEI 563 (968)
T ss_pred CccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHh-CcccCCEEECCCCcccccC
Confidence 666666666667777777777777777777777777777777777777777777776663 6777777777777777777
Q ss_pred chhhhcccccccccccccccccCCCCCCCcccccccccCCcccccCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCC
Q 042348 195 PNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGPPLKV---SCPSSTSDHPYPKPLPYDPS 271 (686)
Q Consensus 195 p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~~~---~c~~~~~~~~~~~~~~~~~~ 271 (686)
|..+.++++|+. +|+++|+++|.+|...++.++....+.||+.+||.+... +|..
T Consensus 564 p~~l~~l~~L~~------l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~---------------- 621 (968)
T PLN00113 564 PKNLGNVESLVQ------VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKR---------------- 621 (968)
T ss_pred ChhHhcCcccCE------EeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcc----------------
Confidence 777777666654 499999999999988888888888899999999864321 1110
Q ss_pred CCCCccccccceeeehhHHHHHHHHHHHHhhhhhhhhccCCCCCCCcCCcchhHHHhhhccceeeecCCccccccccccc
Q 042348 272 WHGGKVHHSCAVITTVAVAVLLGICITGFLFYRQYKKASGCKWGEKVGGCRLEEKLMIKKEFFCFTRNNLDTMSENMEQY 351 (686)
Q Consensus 272 ~~~~~~~~~~~~i~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (686)
........+++++++++++.+++++++++++++++ +.+...... ..+.+...
T Consensus 622 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~~~-------------- 673 (968)
T PLN00113 622 ---VRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRN-NLELKRVEN----------EDGTWELQ-------------- 673 (968)
T ss_pred ---ccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhh-ccccccccc----------cccccccc--------------
Confidence 00011112222222222222222222222222211 110000000 00000000
Q ss_pred ccccCCCCcccCHHHHHHHh--hcccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCccee
Q 042348 352 EFVPLDSQVDFDLEQLLKAS--AFLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSL 428 (686)
Q Consensus 352 ~~~~~~~~~~~~~~~l~~~~--~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 428 (686)
.........++++++..+. ..+||+|+||.||+|.. .++..||||++..... ....|++.+++++|||||++
T Consensus 674 -~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~ 748 (968)
T PLN00113 674 -FFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKL 748 (968)
T ss_pred -ccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceE
Confidence 0000001223444444433 35799999999999987 4688999999865432 22456899999999999999
Q ss_pred eEEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC
Q 042348 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN 508 (686)
Q Consensus 429 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~ 508 (686)
+++|.+.+..++|||||++|+|.++++ .++|.++.+|+.|+|.||+|||..+.++|+||||||+||+++.+
T Consensus 749 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~---------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~ 819 (968)
T PLN00113 749 IGLCRSEKGAYLIHEYIEGKNLSEVLR---------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGK 819 (968)
T ss_pred EEEEEcCCCCEEEEeCCCCCcHHHHHh---------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCC
Confidence 999999999999999999999999995 37899999999999999999996544799999999999999999
Q ss_pred CCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHH
Q 042348 509 MEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588 (686)
Q Consensus 509 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~el 588 (686)
+.+++. ||.+..... .....+|..|+|||++.+..++.++|||||||++|||
T Consensus 820 ~~~~~~-~~~~~~~~~---------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el 871 (968)
T PLN00113 820 DEPHLR-LSLPGLLCT---------------------------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIEL 871 (968)
T ss_pred CceEEE-ecccccccc---------------------------CCCccccccccCcccccCCCCCcccchhhHHHHHHHH
Confidence 888875 665432210 0122457789999999999999999999999999999
Q ss_pred HhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCC-CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDL-DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 589 ltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
+||+.||.........+.+|++..... ......+|+.+.... ...+++.++.+++.+||+.||++||||+||++.|++
T Consensus 872 ~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~ 950 (968)
T PLN00113 872 LTGKSPADAEFGVHGSIVEWARYCYSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLES 950 (968)
T ss_pred HhCCCCCCcccCCCCcHHHHHHHhcCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHH
Confidence 999999965544455677776654433 233445666554332 234567788999999999999999999999999999
Q ss_pred ccccch
Q 042348 668 VNISTE 673 (686)
Q Consensus 668 i~~~~~ 673 (686)
+.....
T Consensus 951 ~~~~~~ 956 (968)
T PLN00113 951 ASRSSS 956 (968)
T ss_pred hhcccc
Confidence 865443
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-54 Score=446.43 Aligned_cols=286 Identities=39% Similarity=0.696 Sum_probs=244.6
Q ss_pred CCcccCHHHHHHHhh-----cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEE
Q 042348 358 SQVDFDLEQLLKASA-----FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432 (686)
Q Consensus 358 ~~~~~~~~~l~~~~~-----~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 432 (686)
....|++.++.+||. ++||+|+||.||+|.+.++..||||++.....+..++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 456789999999983 579999999999999999999999998775443145699999999999999999999999
Q ss_pred EecCc-eeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCe
Q 042348 433 WSVDE-KLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511 (686)
Q Consensus 433 ~~~~~-~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~ 511 (686)
.+.+. .+||||||++|+|.++|+..... .++|..|++||.++|+||+|||+.++.+||||||||+|||+|+++++
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 99984 99999999999999999987531 78999999999999999999999877789999999999999999999
Q ss_pred EEeecCcccccccccCCccccccccccCCCCCCCccccccccCC-CCCccccCcccccCCCCCCcchHHHHHHHHHHHHh
Q 042348 512 HISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNST-TSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590 (686)
Q Consensus 512 kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt 590 (686)
||+|||+|+...... ...... .||.+|+|||++..+..++|+|||||||+|+||+|
T Consensus 217 KlsDFGLa~~~~~~~-----------------------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElit 273 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGD-----------------------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELIT 273 (361)
T ss_pred EccCccCcccCCccc-----------------------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHh
Confidence 999999997543210 011111 68899999999999999999999999999999999
Q ss_pred CCCCccccC-ccchhHHHHHHHHHhhcCCcccccCccccc-CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 591 GKLPMIQIG-SMELNIVQWIQLILEDRKPMTDILDPFLAH-DLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 591 G~~P~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
|+.|.+... ..+..++.|+...+... .+.+++||.+.. ......++..+..++.+|++.+|.+||+|.||++.|+.+
T Consensus 274 gr~~~d~~~~~~~~~l~~w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 274 GRKAVDQSRPRGELSLVEWAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred CCcccCCCCCcccccHHHHHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 999886543 34456899987777665 789999999873 333336888899999999999999999999999999776
Q ss_pred ccc
Q 042348 669 NIS 671 (686)
Q Consensus 669 ~~~ 671 (686)
...
T Consensus 353 ~~~ 355 (361)
T KOG1187|consen 353 LSL 355 (361)
T ss_pred ccc
Confidence 543
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-49 Score=389.59 Aligned_cols=257 Identities=26% Similarity=0.393 Sum_probs=215.8
Q ss_pred cCHHHHHHHhhcccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCc-e
Q 042348 362 FDLEQLLKASAFLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE-K 438 (686)
Q Consensus 362 ~~~~~l~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~ 438 (686)
+.+.++.+ ...||+|..|+|||+.++ +++.+|+|.+... .....+++.+|++++++.+||+||++||.|..++. .
T Consensus 76 i~~~dle~--~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 76 ISLSDLER--LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred cCHHHhhh--hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceE
Confidence 34444433 346999999999999987 5788999999544 33446789999999999999999999999999995 9
Q ss_pred eEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCc
Q 042348 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518 (686)
Q Consensus 439 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 518 (686)
.++||||++|||++++... +.+++...-+|+.+|++||.|||+. ++||||||||+|||++..|++||+|||.
T Consensus 154 sI~mEYMDgGSLd~~~k~~------g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKRV------GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred EeehhhcCCCCHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccc
Confidence 9999999999999999865 3589999999999999999999953 7899999999999999999999999999
Q ss_pred ccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCcccc
Q 042348 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQI 598 (686)
Q Consensus 519 a~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~ 598 (686)
++.+... ..++.+||..|||||.+.+..|+.++||||||++++|+.+|+.||...
T Consensus 226 S~~lvnS-------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 226 SGILVNS-------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred cHHhhhh-------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 9866422 224678999999999999999999999999999999999999999765
Q ss_pred CccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 599 GSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+..+.+..+..+..+. +... ....++.+++..||++||.+||+++|+++|
T Consensus 281 ~~~~~~~~~Ll~~Iv~~ppP~-------lP~~----~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 281 NPPYLDIFELLCAIVDEPPPR-------LPEG----EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCCCCHHHHHHHHhcCCCCC-------CCcc----cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 444556677777777654331 1111 244578899999999999999999999887
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=397.16 Aligned_cols=262 Identities=29% Similarity=0.498 Sum_probs=211.2
Q ss_pred ccCHHHHHHHhhcccCccCceEEEEEEeCCCceEEEEEcCCCCccc--hHHHHHHHHHHhccCCCCcceeeEEEEecC-c
Q 042348 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR--FKEFQTEAEAIGKIRHPNIVSLRAYFWSVD-E 437 (686)
Q Consensus 361 ~~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~ 437 (686)
.++..++.. ...||+|+||+||+|.++....||||++....... .++|.+|+.+|.+++|||||+++|+|.+.. .
T Consensus 37 ~i~~~~l~~--~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 37 EIDPDELPI--EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred ecChHHhhh--hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 344444433 23499999999999999976669999997653322 568999999999999999999999999887 7
Q ss_pred eeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC-ceecCCCCCCeeecCCC-CeEEee
Q 042348 438 KLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR-YVHGDLRPSNILLGKNM-EPHISD 515 (686)
Q Consensus 438 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-iiHrDlkp~NILl~~~~-~~kl~D 515 (686)
.++|||||++|+|.++++.... ..+++..+++|+.|||+||.|||+ ++ ||||||||+|||++.++ ++||+|
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~~~----~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~D 187 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKKRK----RKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIAD 187 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECC
Confidence 9999999999999999988411 579999999999999999999999 66 99999999999999998 999999
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc--CCCCCCcchHHHHHHHHHHHHhCCC
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK--VRKPTQKWDIYSYGVILLEMISGKL 593 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDVwSlGvvl~elltG~~ 593 (686)
||+++...... ...+...||+.|||||++. ...|+.|+|||||||++|||+||+.
T Consensus 188 FGlsr~~~~~~-----------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~ 244 (362)
T KOG0192|consen 188 FGLSREKVISK-----------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI 244 (362)
T ss_pred Cccceeecccc-----------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC
Confidence 99998654321 1122357889999999999 5689999999999999999999999
Q ss_pred CccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 594 PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 594 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
||..... .+.+..+...... +.+. ..+...+..++.+||+.||++||++.+++..|+.+..
T Consensus 245 Pf~~~~~-----~~~~~~v~~~~~R-p~~p----------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 245 PFEDLAP-----VQVASAVVVGGLR-PPIP----------KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred CCCCCCH-----HHHHHHHHhcCCC-CCCC----------ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9965433 2223333322211 1110 1144568889999999999999999999999998753
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-46 Score=390.54 Aligned_cols=243 Identities=23% Similarity=0.398 Sum_probs=209.3
Q ss_pred hcccCccCceEEEEEEe-CCCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 372 AFLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
.++||+|||+.||.++. ..|+.||+|++.+. .....+...+||++.++|+|||||+++++|++.++.|+|.|+|++
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~ 102 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHR 102 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCC
Confidence 56899999999999997 78999999999773 233457789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
++|..+++.+ +++++.++..+++||+.||.|||+ ++|||||||..|+|+++++++||+|||+|..+...+.
T Consensus 103 ~sL~el~Krr------k~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 103 GSLMELLKRR------KPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred ccHHHHHHhc------CCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 9999999844 579999999999999999999999 8999999999999999999999999999998764321
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.....+||+.|+|||++.....+..+||||+|||||.|++|++||.. .++.+
T Consensus 174 -----------------------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet-----k~vke 225 (592)
T KOG0575|consen 174 -----------------------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET-----KTVKE 225 (592)
T ss_pred -----------------------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc-----chHHH
Confidence 22346778889999999998999999999999999999999999943 33445
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+......++..+ ..+..+|+.++|+.||.+|||+.+|+.+
T Consensus 226 ty~~Ik~~~Y~~P~~l-------------s~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 226 TYNKIKLNEYSMPSHL-------------SAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHHHHHhcCccccccc-------------CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 5555555555544322 2246689999999999999999999876
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-47 Score=389.90 Aligned_cols=264 Identities=29% Similarity=0.459 Sum_probs=216.5
Q ss_pred ccCHHHHHHHhhcccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeE
Q 042348 361 DFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLL 440 (686)
Q Consensus 361 ~~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 440 (686)
.++-+++.. .+-||+|.||+||.|.++....||+|.++..... .+.|.+|+++|++++|+|||+++|+|...+..+|
T Consensus 202 ei~r~~l~l--~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyI 278 (468)
T KOG0197|consen 202 EIPREELKL--IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYI 278 (468)
T ss_pred eecHHHHHH--HHHhcCCccceEEEEEEcCCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEE
Confidence 344444432 3459999999999999998889999999886443 4789999999999999999999999999889999
Q ss_pred EEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 441 IYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 441 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
|||||+.|+|.++|+...+ ..+...+.+.++.|||+|++||++ +++|||||.++||||+++..+||+|||+||
T Consensus 279 VtE~m~~GsLl~yLr~~~~----~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTREG----GLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred EEEecccCcHHHHhhhcCC----CccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEccccccc
Confidence 9999999999999997443 568899999999999999999999 999999999999999999999999999999
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccC
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIG 599 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~ 599 (686)
...++.... .....-...|.|||.+..+.++.|||||||||+||||+| |+.||....
T Consensus 352 ~~~d~~Y~~----------------------~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms 409 (468)
T KOG0197|consen 352 LIGDDEYTA----------------------SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS 409 (468)
T ss_pred ccCCCceee----------------------cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC
Confidence 554433211 111122456999999999999999999999999999999 999986544
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
. .+.++.+..+ ..++. ++.|+.++.++|..||+.+|++|||+..+...|+.+....+
T Consensus 410 n-----~ev~~~le~G-yRlp~-----------P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~~ 466 (468)
T KOG0197|consen 410 N-----EEVLELLERG-YRLPR-----------PEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTSTE 466 (468)
T ss_pred H-----HHHHHHHhcc-CcCCC-----------CCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhccc
Confidence 3 2334443333 33221 23356689999999999999999999999999998875443
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-46 Score=367.64 Aligned_cols=192 Identities=27% Similarity=0.441 Sum_probs=171.9
Q ss_pred cCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
||+|+||+||+|+++ ++..||||.+... .....+.+..|+.+|+.++|||||+++++++.++..++|||||.||||.
T Consensus 18 iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs 97 (429)
T KOG0595|consen 18 IGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLS 97 (429)
T ss_pred ccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHH
Confidence 999999999999976 5789999999776 4445667889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC------CCeEEeecCcccccccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN------MEPHISDFGLARLADIA 525 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~------~~~kl~DfGla~~~~~~ 525 (686)
++|+.++ .+++..++.++.|+|.||++||+ ++||||||||+|||++.. -.+||+|||+|+.+..+
T Consensus 98 ~yi~~~~------~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 98 DYIRRRG------RLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred HHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 9999874 59999999999999999999999 999999999999999764 46899999999988744
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
.. ....+|++.|||||++..++|+.|+|+||.|+++|++++|+.||....
T Consensus 169 ~~------------------------a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 169 SM------------------------AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hH------------------------HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 31 234567777999999999999999999999999999999999996543
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-46 Score=368.34 Aligned_cols=247 Identities=23% Similarity=0.383 Sum_probs=201.0
Q ss_pred hcccCccCceEEEEEEe-CCCceEEEEEcCCCCc-------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGW-------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
.+.+|+|+||.|-+|.. ++|+.||||.+++... ......++|+++|++++|||||+++++|...+..|+|||
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE 256 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLE 256 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEE
Confidence 45699999999999975 4799999999976321 122346799999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC---CCeEEeecCccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN---MEPHISDFGLAR 520 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DfGla~ 520 (686)
||+||+|.+.+-.+ +.+.+..-+.+++|++.|+.|||+ +||+||||||+|||+..+ ..+||+|||+|+
T Consensus 257 ~v~GGeLfd~vv~n------k~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 257 YVEGGELFDKVVAN------KYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred EecCccHHHHHHhc------cccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 99999999999876 357778889999999999999999 999999999999999765 679999999999
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC---CCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK---PTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
..... ......+||+.|.|||++.+.. +..++|+||+|||||-+++|.+||..
T Consensus 328 ~~g~~------------------------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~ 383 (475)
T KOG0615|consen 328 VSGEG------------------------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSE 383 (475)
T ss_pred ccccc------------------------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccc
Confidence 76422 2345678888899999997654 34588999999999999999999965
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... ...+.+..++...... .+.+-.++..+++.+||..||++|||+.|++++
T Consensus 384 ~~~~~----sl~eQI~~G~y~f~p~---------~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 384 EYTDP----SLKEQILKGRYAFGPL---------QWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred ccCCc----cHHHHHhcCcccccCh---------hhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 43322 1234455554443222 223345678899999999999999999999876
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-46 Score=352.00 Aligned_cols=253 Identities=24% Similarity=0.369 Sum_probs=205.0
Q ss_pred cccCccCceEEEEEE-eCCCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeE-EEEecCc-eeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVA-LNNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRA-YFWSVDE-KLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~-~~~~~~~-~~lV~e~~~~ 447 (686)
+.||+|.||+|||+. ..+|..||.|.+..+ +....++...|+.+|++++|||||++++ .+..... .+||||||..
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~ 104 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDA 104 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcc
Confidence 369999999999997 467999999998754 3344567899999999999999999999 4555544 7999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC-CceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK-RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
|||...++..... .+.+++..+++++.|++.||.++|+..++ -|+||||||.||+++.+|.+||+|||+++++....
T Consensus 105 GDLsqmIk~~K~q--kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~ 182 (375)
T KOG0591|consen 105 GDLSQMIKHFKKQ--KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT 182 (375)
T ss_pred cCHHHHHHHHHhc--cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh
Confidence 9999999754322 26799999999999999999999995543 38899999999999999999999999999886432
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
+...+.+||++||+||.+.+.+|+.||||||+||++|||+.-+.||.+. ++.
T Consensus 183 -----------------------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~ 234 (375)
T KOG0591|consen 183 -----------------------TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLL 234 (375)
T ss_pred -----------------------HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHH
Confidence 2334678999999999999999999999999999999999999999543 555
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
+..+.+..+..+ .+ ..+-....+..|+..|+..||+.||+...++..+.
T Consensus 235 ~L~~KI~qgd~~--~~---------p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 235 SLCKKIEQGDYP--PL---------PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred HHHHHHHcCCCC--CC---------cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 555555554322 11 11234456888999999999999998655554443
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-45 Score=359.21 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=215.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
++||+|+||.||.++.. +++.+|+|.+++... .+.+....|..+|.+++||+||+++..|++.+..|+|+||+.||
T Consensus 31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GG 110 (357)
T KOG0598|consen 31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGG 110 (357)
T ss_pred eeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCc
Confidence 47999999999999865 578999999977532 34567889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
.|..+|... ..+++..+.-++.+|+.||.|||+ ++||||||||+|||+|++|+++|+|||+++.....+.
T Consensus 111 eLf~hL~~e------g~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~- 180 (357)
T KOG0598|consen 111 ELFYHLQRE------GRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD- 180 (357)
T ss_pred cHHHHHHhc------CCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC-
Confidence 999999866 358999999999999999999999 9999999999999999999999999999985433221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....+||+.|||||++.+..|+..+|+||+||++|||++|.+||... +...+
T Consensus 181 ----------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~-----~~~~~ 233 (357)
T KOG0598|consen 181 ----------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE-----DVKKM 233 (357)
T ss_pred ----------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc-----cHHHH
Confidence 223468889999999999999999999999999999999999999543 44556
Q ss_pred HHHHHhhcCCc-ccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC----CHHHHHHHHhcccccchhhhhccCCCC
Q 042348 609 IQLILEDRKPM-TDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP----SMRHVCDSLDRVNISTEQQFMKGEEPK 683 (686)
Q Consensus 609 ~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP----s~~ev~~~L~~i~~~~~~~~~~~~~~~ 683 (686)
++.+..++.+. +..++ .+..+++.+.|+.||++|- .+.+|.++----...++.-..+...|+
T Consensus 234 ~~~I~~~k~~~~p~~ls-------------~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~Pp 300 (357)
T KOG0598|consen 234 YDKILKGKLPLPPGYLS-------------EEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPP 300 (357)
T ss_pred HHHHhcCcCCCCCccCC-------------HHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCC
Confidence 66666665221 11111 2466889999999999995 566655554444567777777777777
Q ss_pred C
Q 042348 684 F 684 (686)
Q Consensus 684 ~ 684 (686)
|
T Consensus 301 F 301 (357)
T KOG0598|consen 301 F 301 (357)
T ss_pred e
Confidence 6
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.3e-44 Score=341.25 Aligned_cols=257 Identities=19% Similarity=0.302 Sum_probs=198.8
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCc-c-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-Q-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.+|+|+||+|||++.+ +|+.||||++..... . -.+-..+||++|++++|||+|.++.+|......++|+|||+. ++
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-Tv 87 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-TV 87 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-HH
Confidence 4899999999999976 589999999976533 2 235578999999999999999999999999999999999987 44
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+-+.... ..++...+.+++.|+++|+.|+|+ +++|||||||+||||+.++.+||||||+|+.+....
T Consensus 88 L~eLe~~p-----~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg---- 155 (396)
T KOG0593|consen 88 LHELERYP-----NGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG---- 155 (396)
T ss_pred HHHHHhcc-----CCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCc----
Confidence 44444333 458899999999999999999999 999999999999999999999999999999875221
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
...+..+.|.+|+|||.+.+ .+|+..+||||+||++.||++|.+-|.+ ..+.+..-.+
T Consensus 156 -------------------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG--~SDiDQLy~I 214 (396)
T KOG0593|consen 156 -------------------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPG--RSDIDQLYLI 214 (396)
T ss_pred -------------------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCC--cchHHHHHHH
Confidence 12345678999999999877 7899999999999999999999988844 3444444444
Q ss_pred HHHHhhcC-----------CcccccCcccccCCCc----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRK-----------PMTDILDPFLAHDLDK----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~-----------~~~~~~d~~l~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+..+..-. .+..+.=|.......- +....-+++++..||+.||++|++.+|++.+
T Consensus 215 ~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 215 RKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred HHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 43333211 1111111111000000 1122357899999999999999999998865
No 12
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.6e-44 Score=383.93 Aligned_cols=260 Identities=28% Similarity=0.455 Sum_probs=213.1
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
+-||+|+||.||+|+.. +...||||.++..... ...+|++|++++..++|||||+++|+|..++..++|+|||
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm 571 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYM 571 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEec
Confidence 34999999999999854 3467999999887554 6789999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccc--------cCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecC
Q 042348 446 PNGSLATAIHGKAGIIS--------YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
..|||.++|........ ..+|+..+.+.||.|||.|++||-+ +.+|||||..+|+||.++..+||+|||
T Consensus 572 ~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VKIsDfG 648 (774)
T KOG1026|consen 572 DHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVKISDFG 648 (774)
T ss_pred ccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEEecccc
Confidence 99999999986543211 2348899999999999999999999 899999999999999999999999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMI 596 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~ 596 (686)
++|..-..+... ......-..+|||||.+..+++|++||||||||||||++| |+.||.
T Consensus 649 LsRdiYssDYYk---------------------~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~ 707 (774)
T KOG1026|consen 649 LSRDIYSSDYYK---------------------VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY 707 (774)
T ss_pred cchhhhhhhhhc---------------------ccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc
Confidence 998554332210 0111222467999999999999999999999999999999 999997
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
+..+++. ++.+..+. -+. .++.++.++++||..||+.+|++||+++||-..|+......+
T Consensus 708 glSn~EV-----Ie~i~~g~-lL~-----------~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 708 GLSNQEV-----IECIRAGQ-LLS-----------CPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred ccchHHH-----HHHHHcCC-ccc-----------CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 7655442 33332222 111 234577789999999999999999999999999998765544
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-43 Score=357.57 Aligned_cols=257 Identities=21% Similarity=0.297 Sum_probs=210.8
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
++.||+|+|++||+|+.. +++.+|||++.+.. ....+....|-.+|.+| .||.|++|+..|.+....|+|+||++
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~ 157 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAP 157 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecC
Confidence 346999999999999854 58899999987642 23345678899999999 89999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.++|+.. ..+++...+.++.+|+.||+|||+ +|||||||||+|||+|+||++||.|||.|+.+....
T Consensus 158 nGdll~~i~K~------Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 158 NGDLLDLIKKY------GSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred CCcHHHHHHHh------CcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 99999999976 368999999999999999999999 999999999999999999999999999999987655
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
........ ..+......+.+||..|.+||++.....++.+|+|+||||+|+|+.|++||..... .
T Consensus 229 ~~~~~~~~----------~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-----y 293 (604)
T KOG0592|consen 229 KSQENPVD----------PNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-----Y 293 (604)
T ss_pred ccccCccC----------cccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-----H
Confidence 43211000 00111123568999999999999999999999999999999999999999955432 2
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
..++.++.-...+++.+. ..+.+|+.+.|..||.+|+|.+||-+|.
T Consensus 294 liFqkI~~l~y~fp~~fp-------------~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 294 LIFQKIQALDYEFPEGFP-------------EDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred HHHHHHHHhcccCCCCCC-------------HHHHHHHHHHHccCccccccHHHHhhCc
Confidence 235555555444444333 3567899999999999999999998884
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-42 Score=349.88 Aligned_cols=258 Identities=23% Similarity=0.313 Sum_probs=201.2
Q ss_pred ccCccCceEEEEEEe-CCCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~g 448 (686)
.||+|.||.||||+. .+|+.||+|++.... .....-..+||.+|++|+||||+++.+...+. ...|+|+|||+.
T Consensus 124 kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh- 202 (560)
T KOG0600|consen 124 KIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH- 202 (560)
T ss_pred HhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-
Confidence 599999999999984 578999999987654 33345578999999999999999999998877 688999999976
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
||..++.... ..+++.++..+++|++.||+|||+ ++|+|||||.+|||||.+|.+||+|||+|+++.....
T Consensus 203 DL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~- 273 (560)
T KOG0600|consen 203 DLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS- 273 (560)
T ss_pred hhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCCCC-
Confidence 9999987654 469999999999999999999999 9999999999999999999999999999998765432
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
...+..+-|.+|+|||.+.+ ..|+.++|+||.||||.||++|++.|.+. .+.+..+
T Consensus 274 ---------------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~--tEveQl~ 330 (560)
T KOG0600|consen 274 ---------------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR--TEVEQLH 330 (560)
T ss_pred ---------------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc--cHHHHHH
Confidence 12456677999999999877 56999999999999999999999888543 3333333
Q ss_pred HHHHHHhhc---------CCcccccCcccccCCC----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDR---------KPMTDILDPFLAHDLD----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~---------~~~~~~~d~~l~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+....... .+....+.+....... ........++|+..+|..||++|.|+.++++.
T Consensus 331 kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 331 KIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred HHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 333332211 0001111111110000 01123357889999999999999999999865
No 15
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=374.32 Aligned_cols=253 Identities=29% Similarity=0.520 Sum_probs=212.3
Q ss_pred hcccCccCceEEEEEEeCC----CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALNN----EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
.++||.|.||+||+|+++- ...||||.++.+. ...+.+|+.|+.||.+++||||++|.|+....+..+||.|||+
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyME 713 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYME 713 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhh
Confidence 4689999999999999752 4689999998864 4456789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|+.+|+.+.+ .+++.+...++++||.|+.||-+ .++|||||.++|||++.+..+|++|||+++.++++.
T Consensus 714 NGsLDsFLR~~DG-----qftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 714 NGSLDSFLRQNDG-----QFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred CCcHHHHHhhcCC-----ceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 9999999998874 58999999999999999999999 899999999999999999999999999999886543
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
... .+..|. .-...|.|||.+...+++.+||||||||||||.++ |.+||..+.+.+.
T Consensus 786 ~~~-----ytt~GG---------------KIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV-- 843 (996)
T KOG0196|consen 786 EAA-----YTTLGG---------------KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-- 843 (996)
T ss_pred Ccc-----ccccCC---------------ccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH--
Confidence 110 011111 11457999999999999999999999999999887 9999977655432
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
+.. +++...++. +.+++..+.+||+.||++|-.+||.+.||+..|+++-
T Consensus 844 ---Ika-Ie~gyRLPp-----------PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 844 ---IKA-IEQGYRLPP-----------PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred ---HHH-HHhccCCCC-----------CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 222 233333332 2346778999999999999999999999999999864
No 16
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=348.54 Aligned_cols=254 Identities=27% Similarity=0.416 Sum_probs=199.5
Q ss_pred hcccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecC--ceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD--EKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV~e~~~~g 448 (686)
...||+|+||.||++...+ |...|||.+........+.+.+|+.+|++++|||||+++|.....+ .+++.|||+++|
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~G 101 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGG 101 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCC
Confidence 4579999999999998764 8899999987653333677899999999999999999999866555 589999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-CCCeEEeecCcccccccccC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~~~ 527 (686)
+|.+++...++ .+++..+.++.+||++||+|||+ ++||||||||+|||++. ++.+||+|||+++.......
T Consensus 102 sL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 102 SLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred cHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 99999987652 49999999999999999999999 99999999999999999 79999999999986553110
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC-CCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
. ........||+.|||||++..+. ...++|||||||++.||+||+.||... ....
T Consensus 174 ~--------------------~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~ 229 (313)
T KOG0198|consen 174 K--------------------SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEA 229 (313)
T ss_pred c--------------------ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchH
Confidence 0 01122456788899999998533 345999999999999999999999543 1222
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.++-.+.... ..+.+.+ . ...+..+++.+|++.||++|||+.+++++.--.
T Consensus 230 ~~~~~ig~~~-~~P~ip~-----~-----ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 230 EALLLIGRED-SLPEIPD-----S-----LSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred HHHHHHhccC-CCCCCCc-----c-----cCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 2222222222 1121111 1 223567899999999999999999999986543
No 17
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-43 Score=359.44 Aligned_cols=243 Identities=22% Similarity=0.402 Sum_probs=206.1
Q ss_pred ccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
-||+|+.|.||.+.- .+++.||||++........+-+.+|+.+|+..+|+|||++++.|...++.++|||||++|+|.|
T Consensus 280 kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTD 359 (550)
T KOG0578|consen 280 KIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTD 359 (550)
T ss_pred hhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhh
Confidence 499999999999974 4688999999988776666778999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
.+... .+++.++..|+++++.||+|||. ++|||||||.+|||++.+|.+||+|||++..+.....
T Consensus 360 vVt~~-------~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~----- 424 (550)
T KOG0578|consen 360 VVTKT-------RMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS----- 424 (550)
T ss_pred hhhcc-------cccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccC-----
Confidence 98764 48999999999999999999999 9999999999999999999999999999987653321
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLI 612 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 612 (686)
.....+||++|||||+.....|++|+||||||++++||+-|.+||... +-.+.+..+
T Consensus 425 ------------------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE-----~PlrAlyLI 481 (550)
T KOG0578|consen 425 ------------------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE-----NPLRALYLI 481 (550)
T ss_pred ------------------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC-----ChHHHHHHH
Confidence 223567899999999999999999999999999999999999999542 223334444
Q ss_pred HhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 613 LEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 613 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+... . .+.....+.+++.+||+.|+++||++.|+++|
T Consensus 482 a~ng~P~lk--~--------~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 482 ATNGTPKLK--N--------PEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred hhcCCCCcC--C--------ccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 444332111 1 12234568899999999999999999999987
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-43 Score=350.66 Aligned_cols=258 Identities=23% Similarity=0.351 Sum_probs=201.1
Q ss_pred hcccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHH--HHHHHHHHhccC-CCCcceeeEEEEecC-ceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKE--FQTEAEAIGKIR-HPNIVSLRAYFWSVD-EKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-H~nIv~l~~~~~~~~-~~~lV~e~~~ 446 (686)
.+.||.|.||.||+|+. .++..||||+++..-.. .++ -.+|+..|++++ |||||++.+++.+.+ ..++|||||+
T Consensus 15 i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md 93 (538)
T KOG0661|consen 15 IRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD 93 (538)
T ss_pred HHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh
Confidence 34599999999999985 46889999999765322 222 368999999998 999999999999988 8999999996
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
. +|+++++.++ +.+++.+++.|+.||++||+|+|. +|+.|||+||+|||+.....+||+|||+||-....
T Consensus 94 ~-NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk- 163 (538)
T KOG0661|consen 94 C-NLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVRSK- 163 (538)
T ss_pred h-hHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccccC-
Confidence 5 9999999885 689999999999999999999999 99999999999999998889999999999855321
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCccccc-CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
...+.++.|.+|+|||++. .+.|+.+.||||+|||++|+.+-++-|.+. .+.+.
T Consensus 164 -----------------------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~--sE~Dq 218 (538)
T KOG0661|consen 164 -----------------------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA--SEIDQ 218 (538)
T ss_pred -----------------------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC--cHHHH
Confidence 2335678899999999874 567999999999999999999999888543 33333
Q ss_pred HHHHHHHHhhcCC--ccc------ccCcccccCC--C----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 606 VQWIQLILEDRKP--MTD------ILDPFLAHDL--D----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 606 ~~~~~~~~~~~~~--~~~------~~d~~l~~~~--~----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.-.+..++..... +.+ .+.-.+.... . ......+..+++.+|+++||++|||++|.+++-
T Consensus 219 i~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 219 IYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 3333333322110 000 0000000000 0 012456788999999999999999999999873
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.3e-42 Score=353.63 Aligned_cols=241 Identities=25% Similarity=0.395 Sum_probs=207.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|+||.||||+.+ +.+.||+|.+.+. ...+.+.+.+|++++++++|||||.++++|+...+.++|.||+.| +
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~ 86 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-D 86 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-h
Confidence 46999999999999876 4788999999764 334567799999999999999999999999999999999999976 9
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|..+|... ..++++.+..|+.+++.||.|||+ ++|+|||+||.|||++..+.+|++|||+|+.+..+.
T Consensus 87 L~~il~~d------~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t--- 154 (808)
T KOG0597|consen 87 LFTILEQD------GKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT--- 154 (808)
T ss_pred HHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccCc---
Confidence 99999876 469999999999999999999999 999999999999999999999999999999765322
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
...+...||+.|||||...++.|+..+|.||+||++||+++|++||.. ..+.+.+
T Consensus 155 --------------------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----~si~~Lv 209 (808)
T KOG0597|consen 155 --------------------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----RSITQLV 209 (808)
T ss_pred --------------------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----HHHHHHH
Confidence 234566788889999999999999999999999999999999999943 3566667
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+.+..+..+.+. .....+..++...|.+||.+|.+..+++.|
T Consensus 210 ~~I~~d~v~~p~-------------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 210 KSILKDPVKPPS-------------TASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHhcCCCCCcc-------------cccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 777666433322 223457788899999999999999999877
No 20
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.9e-42 Score=319.81 Aligned_cols=259 Identities=23% Similarity=0.333 Sum_probs=201.5
Q ss_pred hcccCccCceEEEEEEe-CCCceEEEEEcCCCCccc--hHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQR--FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
...+|+|.||.||+|+. .+|+.||||+++.....+ .....+||+.|+.++|+||+.++++|-..+...+|+|||+.
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t- 85 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT- 85 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-
Confidence 34699999999999985 468999999998754322 34678999999999999999999999999999999999965
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
||+..++... ..++..++..++.++++||+|||+ +.|+||||||.|+|++++|.+||+|||+|+.+.....
T Consensus 86 dLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~- 156 (318)
T KOG0659|consen 86 DLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR- 156 (318)
T ss_pred cHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCc-
Confidence 9999998775 579999999999999999999999 8999999999999999999999999999997653221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.....+-|.+|+|||.+.+ ..|+..+||||.|||+.||+-|.+-|. +..+.+...
T Consensus 157 ----------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp--G~sDidQL~ 212 (318)
T KOG0659|consen 157 ----------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP--GDSDIDQLS 212 (318)
T ss_pred ----------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC--CCchHHHHH
Confidence 1122367889999998876 569999999999999999999885553 233344333
Q ss_pred HHHHHHhhcC--Cccc---ccCcc-------cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRK--PMTD---ILDPF-------LAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~--~~~~---~~d~~-------l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+-..+.... .+++ +-|.. .....-...+....++++.+|+.+||.+|++++|++++
T Consensus 213 ~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 213 KIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 3333332211 1111 11110 00000112244467899999999999999999999876
No 21
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=348.49 Aligned_cols=259 Identities=20% Similarity=0.300 Sum_probs=204.3
Q ss_pred cccCHHHHHHHhhcccCccCceEEEEEEeCCCceEEEEEcCCCCccc---hHHHHHHHHHHhccCCCCcceeeEEEEe--
Q 042348 360 VDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR---FKEFQTEAEAIGKIRHPNIVSLRAYFWS-- 434 (686)
Q Consensus 360 ~~~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~-- 434 (686)
..++.+++.......||+|++|.||+|.+ +++.||||+++...... .+.|.+|+.+|++++|||||++++++.+
T Consensus 13 ~~i~~~~i~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~ 91 (283)
T PHA02988 13 KCIESDDIDKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV 91 (283)
T ss_pred eecCHHHcCCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc
Confidence 34455555444445799999999999998 57899999997643322 4678899999999999999999999977
Q ss_pred --cCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeE
Q 042348 435 --VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512 (686)
Q Consensus 435 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 512 (686)
....++||||+++|+|.+++... ..+++....+++.|++.||+|||+. .+++||||||+||++++++.+|
T Consensus 92 ~~~~~~~lv~Ey~~~g~L~~~l~~~------~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~k 163 (283)
T PHA02988 92 DDLPRLSLILEYCTRGYLREVLDKE------KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLK 163 (283)
T ss_pred cCCCceEEEEEeCCCCcHHHHHhhC------CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEE
Confidence 34678999999999999999764 3588999999999999999999972 3788999999999999999999
Q ss_pred EeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHHHHHHHh
Q 042348 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVILLEMIS 590 (686)
Q Consensus 513 l~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvvl~ellt 590 (686)
|+|||+++...... ....++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 164 l~dfg~~~~~~~~~--------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~ 217 (283)
T PHA02988 164 IICHGLEKILSSPP--------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFT 217 (283)
T ss_pred EcccchHhhhcccc--------------------------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHH
Confidence 99999997543211 12345677999999876 679999999999999999999
Q ss_pred CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 591 GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 591 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
|+.||..... .+....+........ ++ ......+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 218 g~~Pf~~~~~-----~~~~~~i~~~~~~~~--~~---------~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 218 GKIPFENLTT-----KEIYDLIINKNNSLK--LP---------LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCCCCCCCCH-----HHHHHHHHhcCCCCC--CC---------CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 9999954322 222333322221111 00 012346889999999999999999999999998765
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-42 Score=339.79 Aligned_cols=258 Identities=22% Similarity=0.354 Sum_probs=205.4
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||.|..++||+|+. +.++.||||++.-.. ..+.+.+.+|+..|+.++||||++++..|..+...|+||.||.+||+
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ 111 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSL 111 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcH
Confidence 3699999999999985 467999999997543 23468899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++...-. ..+++..+..|++++++||.|||. +|.||||||+.||||+++|.+||+|||.+..+...+. .
T Consensus 112 ldIik~~~~----~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~--R 182 (516)
T KOG0582|consen 112 LDIIKTYYP----DGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD--R 182 (516)
T ss_pred HHHHHHHcc----ccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecccCc--e
Confidence 999987543 358999999999999999999999 9999999999999999999999999998876654321 0
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
. ....+..+||++|||||++.. ..|+.|+||||||++..||.+|..||....+...
T Consensus 183 ~-----------------~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv----- 240 (516)
T KOG0582|consen 183 Q-----------------VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV----- 240 (516)
T ss_pred e-----------------eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-----
Confidence 0 012256788999999999533 5699999999999999999999999976554432
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+.+..+.....- + ...........+.+++..||++||++|||+++++++
T Consensus 241 Ll~tLqn~pp~~~t~~--~-~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 241 LLLTLQNDPPTLLTSG--L-DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred HHHHhcCCCCCccccc--C-ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 2233334333222100 0 000111233468889999999999999999999876
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-42 Score=356.61 Aligned_cols=277 Identities=23% Similarity=0.400 Sum_probs=213.3
Q ss_pred CcccCHHHHHHHhhcccCccCceEEEEEEeCCCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecC
Q 042348 359 QVDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD 436 (686)
Q Consensus 359 ~~~~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 436 (686)
.+++.++++.. ...||+|+||+||+|++.+ .||||.++... ....+.|.+|+..+++-+|.||+-+.|||..+.
T Consensus 386 ~WeIp~~ev~l--~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 386 EWEIPPEEVLL--GERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccCHHHhhc--cceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 35556666554 4579999999999999873 49999987653 345678999999999999999999999998877
Q ss_pred ceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeec
Q 042348 437 EKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDF 516 (686)
Q Consensus 437 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 516 (686)
. .||..+|+|-+|+.++|-.+ ..+...+...|+.|||+|+.|||. ++|||||||..||++.+++.|||+||
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~e-----tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQE-----TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred e-eeeehhccCchhhhhccchh-----hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecc
Confidence 7 99999999999999999775 468899999999999999999999 99999999999999999999999999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC---CCCCCcchHHHHHHHHHHHHhCCC
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV---RKPTQKWDIYSYGVILLEMISGKL 593 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlGvvl~elltG~~ 593 (686)
|++..-..-. |. .......|...|||||++.. .+|++.+||||||+|+|||+||..
T Consensus 533 GLatvk~~w~------------g~---------~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~l 591 (678)
T KOG0193|consen 533 GLATVKTRWS------------GE---------QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGEL 591 (678)
T ss_pred cceeeeeeec------------cc---------cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcC
Confidence 9986422110 00 11122345667999999864 468999999999999999999999
Q ss_pred CccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 594 PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 594 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
||. ....+..+. .+..+.-+++.... ...+..++.+|+..||.+++++||.+.+|+..|+++..+.-
T Consensus 592 Pys-i~~~dqIif-----mVGrG~l~pd~s~~-------~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~p 658 (678)
T KOG0193|consen 592 PYS-IQNRDQIIF-----MVGRGYLMPDLSKI-------RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLP 658 (678)
T ss_pred CcC-CCChhheEE-----EecccccCccchhh-------hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccc
Confidence 996 322222110 11111112221111 12456688899999999999999999999999988876543
Q ss_pred hhhhccCCC
Q 042348 674 QQFMKGEEP 682 (686)
Q Consensus 674 ~~~~~~~~~ 682 (686)
+--+..++|
T Consensus 659 ki~RS~S~P 667 (678)
T KOG0193|consen 659 KINRSASEP 667 (678)
T ss_pred ccccCcCcc
Confidence 333334444
No 24
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=351.99 Aligned_cols=259 Identities=25% Similarity=0.401 Sum_probs=207.3
Q ss_pred cccCHHHHHHHhhcccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCcee
Q 042348 360 VDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKL 439 (686)
Q Consensus 360 ~~~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 439 (686)
+++.++++.. -+.||.|+.|.||+|++. ++.||||+++.- -+.+|+-|++|+||||+.+.|+|....-++
T Consensus 119 WeiPFe~IsE--LeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyC 188 (904)
T KOG4721|consen 119 WEIPFEEISE--LEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYC 188 (904)
T ss_pred ccCCHHHhhh--hhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeE
Confidence 3344444432 246999999999999997 577999998542 246789999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcc
Q 042348 440 LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA 519 (686)
Q Consensus 440 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 519 (686)
||||||+.|-|..+|+.. +.++......|..+||.|+.|||. +.|||||||.-||||..+..+||+|||.+
T Consensus 189 IiMEfCa~GqL~~VLka~------~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS 259 (904)
T KOG4721|consen 189 IIMEFCAQGQLYEVLKAG------RPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTS 259 (904)
T ss_pred EeeeccccccHHHHHhcc------CccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccch
Confidence 999999999999999876 468888999999999999999999 89999999999999999999999999999
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
+.+... .......||..|||||++...++++|+||||||||||||+||..||....
T Consensus 260 ~e~~~~------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd 315 (904)
T KOG4721|consen 260 KELSDK------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD 315 (904)
T ss_pred Hhhhhh------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc
Confidence 865422 12235788999999999999999999999999999999999999995543
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc----ccchhh
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN----ISTEQQ 675 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~----~~~~~~ 675 (686)
.... + +.-...... ..-+..++..+.-|++.||+..|..||++++|+.||+=.. ..++++
T Consensus 316 ssAI-----I---wGVGsNsL~--------LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~~tee~ 379 (904)
T KOG4721|consen 316 SSAI-----I---WGVGSNSLH--------LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLSTTEET 379 (904)
T ss_pred hhee-----E---EeccCCccc--------ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhcccHHH
Confidence 3221 1 111111111 1122345566778899999999999999999999997533 344454
Q ss_pred hh
Q 042348 676 FM 677 (686)
Q Consensus 676 ~~ 677 (686)
|.
T Consensus 380 yf 381 (904)
T KOG4721|consen 380 YF 381 (904)
T ss_pred HH
Confidence 44
No 25
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-41 Score=352.54 Aligned_cols=243 Identities=23% Similarity=0.358 Sum_probs=202.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC----Cc-cchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG----GW-QRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||.|... ++..||+|.+... .. ...+.+.+|+.++++++ ||||++++.++......++||||+
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~ 102 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYC 102 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEec
Confidence 46999999999999754 6799999977553 11 22356678999999998 999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-CCeEEeecCccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-MEPHISDFGLARLADI 524 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~~~~ 524 (686)
.+|+|.+++... .++.+.++.+++.|++.|++|||+ ++|+||||||+|||+|.+ +++||+|||++.....
T Consensus 103 ~gGdL~~~i~~~------g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~ 173 (370)
T KOG0583|consen 103 SGGDLFDYIVNK------GRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG 173 (370)
T ss_pred CCccHHHHHHHc------CCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence 999999999884 468889999999999999999999 999999999999999999 9999999999987631
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC-CC-CcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PT-QKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.. ......+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||..
T Consensus 174 ~~-----------------------~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d----- 225 (370)
T KOG0583|consen 174 ED-----------------------GLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD----- 225 (370)
T ss_pred CC-----------------------CcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----
Confidence 10 2334667888999999999877 75 789999999999999999999955
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+.......+..+...++..++ ..++..++.+|+..||.+|+++.+|+++
T Consensus 226 ~~~~~l~~ki~~~~~~~p~~~~------------S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 226 SNVPNLYRKIRKGEFKIPSYLL------------SPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred ccHHHHHHHHhcCCccCCCCcC------------CHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 3334444555555555554441 2357789999999999999999999843
No 26
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.3e-41 Score=343.35 Aligned_cols=268 Identities=22% Similarity=0.279 Sum_probs=203.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc---chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ---RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||.|+-+ +|..+|+|++++.... ..+....|-.+|...++|+||+++..|.+.+..||||||++||
T Consensus 147 k~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGG 226 (550)
T KOG0605|consen 147 KVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGG 226 (550)
T ss_pred eeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCc
Confidence 36999999999999865 5899999999886543 3456788999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
|+..+|... ..|++..+..++.+++.|++.+|. .|+|||||||+|+|||..|++||+|||++.-+......
T Consensus 227 D~mTLL~~~------~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~ 297 (550)
T KOG0605|consen 227 DMMTLLMRK------DTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRI 297 (550)
T ss_pred cHHHHHHhc------CcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhhhhhhh
Confidence 999999866 469999999999999999999999 99999999999999999999999999999755432211
Q ss_pred cc------ccccccccC--------CCCCCCcc----------ccccccCCCCCccccCcccccCCCCCCcchHHHHHHH
Q 042348 529 PE------VHWEQSTTG--------TPLQSSPY----------EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVI 584 (686)
Q Consensus 529 ~~------~~~~~~~~g--------~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvv 584 (686)
.. ......... ++...... ......+.+||+.|||||++.+..|+..+|+||+|||
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~I 377 (550)
T KOG0605|consen 298 ESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCI 377 (550)
T ss_pred hhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHH
Confidence 10 000000000 00000000 0112346899999999999999999999999999999
Q ss_pred HHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC---HHHH
Q 042348 585 LLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS---MRHV 661 (686)
Q Consensus 585 l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ev 661 (686)
||||+.|.+||......+ ..+.+...+..+....+ .....+..++|.+|+. ||++|-. ++||
T Consensus 378 myEmLvGyPPF~s~tp~~-----T~rkI~nwr~~l~fP~~---------~~~s~eA~DLI~rll~-d~~~RLG~~G~~EI 442 (550)
T KOG0605|consen 378 MYEMLVGYPPFCSETPQE-----TYRKIVNWRETLKFPEE---------VDLSDEAKDLITRLLC-DPENRLGSKGAEEI 442 (550)
T ss_pred HHHHHhCCCCCCCCCHHH-----HHHHHHHHhhhccCCCc---------CcccHHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence 999999999997654433 23344333322111111 1122467789999998 9999964 6666
Q ss_pred HHH
Q 042348 662 CDS 664 (686)
Q Consensus 662 ~~~ 664 (686)
-+|
T Consensus 443 K~H 445 (550)
T KOG0605|consen 443 KKH 445 (550)
T ss_pred hcC
Confidence 655
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-41 Score=351.46 Aligned_cols=242 Identities=23% Similarity=0.366 Sum_probs=209.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+.|.|-.|++. +|+.+|||.+.+.. ......+++||-+|+-+.||||+++|+++.++.++|+|.||+++|
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gG 97 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGG 97 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCc
Confidence 35999999999999864 79999999997652 222456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
-|++++..++ ++++.+..+++.||+.|+.|+|. .+|+|||+||+|+|+|..+++||+|||+|.+-..+
T Consensus 98 ELFdylv~kG------~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g--- 165 (786)
T KOG0588|consen 98 ELFDYLVRKG------PLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG--- 165 (786)
T ss_pred hhHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCC---
Confidence 9999998774 69999999999999999999999 89999999999999999999999999999754322
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......+|++.|.|||++.+.+| +.++||||+|||||.|+||+.||. +.++..
T Consensus 166 ---------------------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-----DdNir~ 219 (786)
T KOG0588|consen 166 ---------------------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-----DDNIRV 219 (786)
T ss_pred ---------------------ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-----CccHHH
Confidence 23456688889999999999887 679999999999999999999994 456666
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
....+..+...++..+.+ +..+|+.+|+..||++|.|++||++|-
T Consensus 220 LLlKV~~G~f~MPs~Is~-------------eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 220 LLLKVQRGVFEMPSNISS-------------EAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHHHHHcCcccCCCcCCH-------------HHHHHHHHHhccCccccccHHHHhhCc
Confidence 777777776666654433 566899999999999999999999984
No 28
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-41 Score=320.00 Aligned_cols=230 Identities=21% Similarity=0.323 Sum_probs=200.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc---chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ---RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||.|+||.|..++.+ +|..+|+|++.+.... ..+...+|.++|+.+.||+++++++.|.+.+..++||||++||
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GG 129 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGG 129 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCc
Confidence 46999999999999976 4788999999875433 3455778999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
.|..+++.. +++++..++-++.||+.||+|||+ .+|++||+||+|||+|.+|.+||.|||.|+....
T Consensus 130 ElFS~Lrk~------~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~---- 196 (355)
T KOG0616|consen 130 ELFSYLRKS------GRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG---- 196 (355)
T ss_pred cHHHHHHhc------CCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecC----
Confidence 999999876 469999999999999999999999 8999999999999999999999999999986542
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.+-..+||+.|+|||.+....|+.++|.|||||++|||+.|.+||..... .+.
T Consensus 197 ----------------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~~i 249 (355)
T KOG0616|consen 197 ----------------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----IQI 249 (355)
T ss_pred ----------------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----HHH
Confidence 12346788889999999999999999999999999999999999965443 455
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCC
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR 655 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~R 655 (686)
.+.++.++-.++..+.+ .+.+|+.+.|+.|-.+|
T Consensus 250 Y~KI~~~~v~fP~~fs~-------------~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 250 YEKILEGKVKFPSYFSS-------------DAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HHHHHhCcccCCcccCH-------------HHHHHHHHHHhhhhHhh
Confidence 77777777666665554 45688889999999998
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=8e-41 Score=352.87 Aligned_cols=259 Identities=27% Similarity=0.394 Sum_probs=198.0
Q ss_pred hcccCccCceEEEEEEe------CCCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecC-ceeEEE
Q 042348 372 AFLLGKSTIGIVYKVAL------NNEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVD-EKLLIY 442 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~-~~~lV~ 442 (686)
.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+.++.++ +||||++++++|...+ ..++||
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 35799999999999974 235689999987543 23346789999999999 8999999999987654 578999
Q ss_pred eccCCCCHHHHhhcCCCcc--------------------------------------------------------ccCCC
Q 042348 443 DYIPNGSLATAIHGKAGII--------------------------------------------------------SYRPL 466 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~--------------------------------------------------------~~~~l 466 (686)
||+++|+|.+++....... ....+
T Consensus 92 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (338)
T cd05102 92 EFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPL 171 (338)
T ss_pred ecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCC
Confidence 9999999999997532100 01358
Q ss_pred CHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCc
Q 042348 467 SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSP 546 (686)
Q Consensus 467 ~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~ 546 (686)
++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 172 ~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~------------------ 230 (338)
T cd05102 172 TMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------------------ 230 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcch------------------
Confidence 889999999999999999999 89999999999999999999999999999754321110
Q ss_pred cccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHHHHhhcCCcccccCc
Q 042348 547 YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDP 625 (686)
Q Consensus 547 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 625 (686)
.......++..|+|||++.+..++.++|||||||++|||++ |..||......+ ...... .......
T Consensus 231 ---~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~~~~-~~~~~~~----- 297 (338)
T cd05102 231 ---VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EFCQRL-KDGTRMR----- 297 (338)
T ss_pred ---hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHHHHH-hcCCCCC-----
Confidence 01112234567999999988899999999999999999997 999995533221 111111 1111110
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 626 FLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 626 ~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.. ......+.+++.+||+.||++|||+.||++.|+++..
T Consensus 298 -~~-----~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 298 -AP-----ENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred -CC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00 1123467899999999999999999999999998653
No 30
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=377.12 Aligned_cols=261 Identities=28% Similarity=0.403 Sum_probs=210.0
Q ss_pred hcccCccCceEEEEEEeCC--Cc----eEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 372 AFLLGKSTIGIVYKVALNN--EE----AVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~--~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
...||+|+||.||+|.+.+ +. .||||.++.. +.++..+|.+|..+|++++|||||+++|+|.+....+|++||
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ley 776 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEY 776 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehh
Confidence 3579999999999998754 32 4899999775 556778999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCc-cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 445 IPNGSLATAIHGKAGI-ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|++|||..+|++.+.. .....|+..+.+.++.|||+|+.||++ ++.|||||.++|+|++....+||+|||+|+.+.
T Consensus 777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchhHhhh
Confidence 9999999999986321 112568999999999999999999999 899999999999999999999999999999443
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~ 602 (686)
..+.. +. .....-...|||||.+.++.++.|+|||||||++||++| |..||....+.+
T Consensus 854 ~~~yy-----r~----------------~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~ 912 (1025)
T KOG1095|consen 854 DKDYY-----RK----------------HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE 912 (1025)
T ss_pred hchhe-----ec----------------cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH
Confidence 32211 00 000122356999999999999999999999999999999 999996544332
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
. ...+..+. .+. .+..|+..++++|..||+.+|++||++..|++++..+.....
T Consensus 913 v-----~~~~~~gg-RL~-----------~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 913 V-----LLDVLEGG-RLD-----------PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred H-----HHHHHhCC-ccC-----------CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 1 22223332 211 122356678999999999999999999999999888764433
No 31
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-42 Score=340.39 Aligned_cols=243 Identities=23% Similarity=0.396 Sum_probs=203.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|.||.||||... .++.||+|.+... ...+.++.++|+.++.+++++||.++|+.|..+...+++||||.+|++
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv 98 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV 98 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence 46999999999999865 5789999999764 344567899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+.+.... .+.+..+.-|++++..||.|||. ++.+|||||+.|||+..+|.+|++|||.+-.+.....
T Consensus 99 ~~lL~~~~------~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~--- 166 (467)
T KOG0201|consen 99 LDLLKSGN------ILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK--- 166 (467)
T ss_pred hhhhccCC------CCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhh---
Confidence 99997653 35777888899999999999999 8999999999999999999999999999976653321
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
.....+||++|||||++....|+.|+||||||++.+||.+|.+|+....++.. +
T Consensus 167 --------------------rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv-----l- 220 (467)
T KOG0201|consen 167 --------------------RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV-----L- 220 (467)
T ss_pred --------------------ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE-----E-
Confidence 22467889999999999988999999999999999999999999966554321 0
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.-++.-..|.+.+. ....+.+++..||++||+.||++.+++++
T Consensus 221 ------flIpk~~PP~L~~~-----~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 221 ------FLIPKSAPPRLDGD-----FSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ------EeccCCCCCccccc-----cCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 11122223334332 23458889999999999999999999876
No 32
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-41 Score=350.49 Aligned_cols=252 Identities=25% Similarity=0.374 Sum_probs=202.6
Q ss_pred cccCccCceEEEEEEeCCC----ce-EEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALNNE----EA-VAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~----~~-vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
..||+|+||.||+|++... .. ||||..+.. ......+|.+|+++|++++|||||++||++......++|||+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl 242 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL 242 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence 4699999999999987532 23 899998752 345567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
|.||+|.++|.... ..++..++..++.+.|.||+|||+ +++|||||-++|+|++.++.+||+|||+++....
T Consensus 243 ~~gGsL~~~L~k~~-----~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~ 314 (474)
T KOG0194|consen 243 CNGGSLDDYLKKNK-----KSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ 314 (474)
T ss_pred cCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCcc
Confidence 99999999999875 358999999999999999999999 9999999999999999999999999999875431
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccch
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~ 603 (686)
-... .....-...|+|||.+....|++++|||||||++||+++ |..||.+....
T Consensus 315 ~~~~-----------------------~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-- 369 (474)
T KOG0194|consen 315 YVMK-----------------------KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-- 369 (474)
T ss_pred eeec-----------------------cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--
Confidence 1000 000112346999999999999999999999999999999 89899654432
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
+....+.....++..- ...+..+..++.+||..+|++||+|.++.+.|+.+...
T Consensus 370 ---~v~~kI~~~~~r~~~~-----------~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 370 ---EVKAKIVKNGYRMPIP-----------SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred ---HHHHHHHhcCccCCCC-----------CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 2233332333222110 11234566788899999999999999999999987644
No 33
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.7e-40 Score=346.17 Aligned_cols=241 Identities=22% Similarity=0.324 Sum_probs=195.1
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+||+|+||.||++... +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 5899999999999865 68899999986532 2334567889999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 82 L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--- 149 (323)
T cd05571 82 LFFHLSRE------RVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--- 149 (323)
T ss_pred HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---
Confidence 99998754 458999999999999999999999 899999999999999999999999999987432111
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 150 --------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~ 204 (323)
T cd05571 150 --------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLF 204 (323)
T ss_pred --------------------CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-----HHHH
Confidence 011234578889999999988999999999999999999999999954321 1222
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
..+.......+. ....++.+++.+||+.||++|| ++.+++++
T Consensus 205 ~~~~~~~~~~p~-------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 205 ELILMEEIRFPR-------------TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHcCCCCCCC-------------CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 222222211111 1123577899999999999999 79998875
No 34
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.4e-40 Score=342.28 Aligned_cols=240 Identities=21% Similarity=0.317 Sum_probs=193.6
Q ss_pred cCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
||+|+||.||+|... +++.||+|.+... .......+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999876 4788999998643 223446788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--- 148 (312)
T cd05585 81 FHHLQRE------GRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD--- 148 (312)
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC---
Confidence 9999764 358999999999999999999999 8999999999999999999999999999875321110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||.... ..+..+
T Consensus 149 --------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~ 203 (312)
T cd05585 149 --------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYR 203 (312)
T ss_pred --------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHH
Confidence 1123457888999999999899999999999999999999999995432 223333
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC---HHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS---MRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ev~~~ 664 (686)
.+.......+.. ....+.+++.+||+.||++||+ +.|++.+
T Consensus 204 ~~~~~~~~~~~~-------------~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 204 KILQEPLRFPDG-------------FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHcCCCCCCCc-------------CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 333332222111 1235678999999999999985 5666654
No 35
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-40 Score=346.39 Aligned_cols=262 Identities=23% Similarity=0.324 Sum_probs=208.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
.+||+|.||.|+++..+ +++.+|||.+++.. ..+.+....|.+++... +||.+++++.+|.+.++.|+||||+.|
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~G 453 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAG 453 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCC
Confidence 47999999999999976 47789999998863 34567788899998888 599999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
||+..+.+. ..+++..+.-++..|+.||+|||+ ++||+||||.+|||+|.+|++||+|||+++-....+
T Consensus 454 gdm~~~~~~-------~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g- 522 (694)
T KOG0694|consen 454 GDLMHHIHT-------DVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG- 522 (694)
T ss_pred CcEEEEEec-------ccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccccCCCC-
Confidence 996665553 358999999999999999999999 999999999999999999999999999998432111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
..+++.+||+.|||||++.+..|+..+|.|||||+||||+.|..||.+.+.+ +
T Consensus 523 ----------------------~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-----e 575 (694)
T KOG0694|consen 523 ----------------------DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-----E 575 (694)
T ss_pred ----------------------CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-----H
Confidence 2345678899999999999999999999999999999999999999654332 2
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHHHhcccccchhhhhccCCC
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM-----RHVCDSLDRVNISTEQQFMKGEEP 682 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~~~L~~i~~~~~~~~~~~~~~ 682 (686)
....++.+....+.. ...+.+.++.++|.++|++|-.+ .+|.++=--=...++.-..+..+|
T Consensus 576 ~FdsI~~d~~~yP~~-------------ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~P 642 (694)
T KOG0694|consen 576 VFDSIVNDEVRYPRF-------------LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKP 642 (694)
T ss_pred HHHHHhcCCCCCCCc-------------ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCC
Confidence 345555554333322 23467789999999999999765 445444211123355555566666
Q ss_pred CCC
Q 042348 683 KFD 685 (686)
Q Consensus 683 ~~~ 685 (686)
+|.
T Consensus 643 Pf~ 645 (694)
T KOG0694|consen 643 PFV 645 (694)
T ss_pred CCC
Confidence 663
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.2e-39 Score=335.13 Aligned_cols=252 Identities=23% Similarity=0.243 Sum_probs=196.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++||||+++|
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g 85 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGG 85 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCC
Confidence 46999999999999864 688999999865321 22345789999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||++.......
T Consensus 86 ~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05631 86 DLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-- 156 (285)
T ss_pred cHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--
Confidence 99988865332 358999999999999999999999 899999999999999999999999999997543211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 157 ----------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~ 213 (285)
T cd05631 157 ----------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEV 213 (285)
T ss_pred ----------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHH
Confidence 11234578889999999999999999999999999999999999964332111 1111
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH--Hhccc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCDS--LDRVN 669 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~--L~~i~ 669 (686)
........... . ......+.+++.+||+.||++||+ +++++++ ++.+.
T Consensus 214 ~~~~~~~~~~~----~---------~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 214 DRRVKEDQEEY----S---------EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred HHHhhcccccC----C---------ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 11111111110 0 012235778999999999999997 7888876 44443
No 37
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.6e-39 Score=337.59 Aligned_cols=261 Identities=22% Similarity=0.318 Sum_probs=196.8
Q ss_pred cccCccCceEEEEEEeCC-----------------CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEe
Q 042348 373 FLLGKSTIGIVYKVALNN-----------------EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 434 (686)
..||+|+||.||++..++ +..||+|.+.... .....+|.+|++++.+++||||+++++++..
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 90 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVD 90 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEec
Confidence 469999999999997532 3369999987643 2335679999999999999999999999999
Q ss_pred cCceeEEEeccCCCCHHHHhhcCCCc-------------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCC
Q 042348 435 VDEKLLIYDYIPNGSLATAIHGKAGI-------------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPS 501 (686)
Q Consensus 435 ~~~~~lV~e~~~~gsL~~~l~~~~~~-------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~ 501 (686)
.+..++||||+++|+|.+++...... .....++|..+.+++.|++.||+|||+ .+|+||||||+
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH~dlkp~ 167 (304)
T cd05096 91 EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVHRDLATR 167 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccccCcchh
Confidence 99999999999999999998653210 011357889999999999999999999 89999999999
Q ss_pred CeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHH
Q 042348 502 NILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSY 581 (686)
Q Consensus 502 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSl 581 (686)
|||+++++.+||+|||+++........ .......++..|+|||++....++.++|||||
T Consensus 168 Nill~~~~~~kl~DfG~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 226 (304)
T cd05096 168 NCLVGENLTIKIADFGMSRNLYAGDYY---------------------RIQGRAVLPIRWMAWECILMGKFTTASDVWAF 226 (304)
T ss_pred heEEcCCccEEECCCccceecccCcee---------------------EecCcCCCCccccCHHHHhcCCCCchhhhHHH
Confidence 999999999999999999754322110 01112334667999999988889999999999
Q ss_pred HHHHHHHHh--CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 042348 582 GVILLEMIS--GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659 (686)
Q Consensus 582 Gvvl~ellt--G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 659 (686)
||++|||++ +..||..... ......+............... ...+...+.+++.+||+.||++|||+.
T Consensus 227 G~~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~li~~cl~~~p~~RPs~~ 296 (304)
T cd05096 227 GVTLWEILMLCKEQPYGELTD--EQVIENAGEFFRDQGRQVYLFR--------PPPCPQGLYELMLQCWSRDCRERPSFS 296 (304)
T ss_pred HHHHHHHHHccCCCCCCcCCH--HHHHHHHHHHhhhccccccccC--------CCCCCHHHHHHHHHHccCCchhCcCHH
Confidence 999999987 5667754322 2222222222221111000000 011234688999999999999999999
Q ss_pred HHHHHHhc
Q 042348 660 HVCDSLDR 667 (686)
Q Consensus 660 ev~~~L~~ 667 (686)
||.+.|++
T Consensus 297 ~i~~~l~~ 304 (304)
T cd05096 297 DIHAFLTE 304 (304)
T ss_pred HHHHHHhC
Confidence 99998864
No 38
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7e-40 Score=314.95 Aligned_cols=258 Identities=21% Similarity=0.280 Sum_probs=197.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccc--hHHHHHHHHHHhccCCCCcceeeEEEEe--cCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQR--FKEFQTEAEAIGKIRHPNIVSLRAYFWS--VDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lV~e~~~~ 447 (686)
+.|++|.||.||+|+.. +++.||+|+++...... .-...+||.+|.+++|||||.+..+... .+..|+|||||+.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh 161 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH 161 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh
Confidence 45999999999999865 57899999997643211 2346899999999999999999888764 4678999999976
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
||..+++... +++...+++.++.|+++|++|||. +.|+||||||+|+|+...|.+||+|||+|+.+....
T Consensus 162 -DLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~- 231 (419)
T KOG0663|consen 162 -DLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL- 231 (419)
T ss_pred -hHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCCc-
Confidence 9999998764 578999999999999999999999 899999999999999999999999999999664321
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
...+..+-|.+|+|||.+.+. .|+++.|+||+|||+.||+++++-|.+. .+.+..
T Consensus 232 ----------------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~--sE~dQl 287 (419)
T KOG0663|consen 232 ----------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK--SEIDQL 287 (419)
T ss_pred ----------------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC--chHHHH
Confidence 233456778999999998774 5999999999999999999999888543 333333
Q ss_pred HHHHHHHhhc--CCcccccCcc--------------cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDR--KPMTDILDPF--------------LAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~--~~~~~~~d~~--------------l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+-..+... ..++...... +...+........-.+++...+.+||.+|.|+.|.+++
T Consensus 288 ~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 288 DKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred HHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 3333333211 0111111100 00011111112456789999999999999999999876
No 39
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.2e-39 Score=341.87 Aligned_cols=241 Identities=23% Similarity=0.343 Sum_probs=195.0
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+||+|+||.||++... +++.||+|.+... .......+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 5899999999999865 5889999998653 22344678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 82 L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--- 149 (328)
T cd05593 82 LFFHLSRE------RVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--- 149 (328)
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc---
Confidence 99988754 358999999999999999999999 899999999999999999999999999987432110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 150 --------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~ 204 (328)
T cd05593 150 --------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLF 204 (328)
T ss_pred --------------------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHH
Confidence 011234578889999999988899999999999999999999999954322 1222
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
..+.......+.. ....+.+++.+||+.||++|| ++.|++++
T Consensus 205 ~~~~~~~~~~p~~-------------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 205 ELILMEDIKFPRT-------------LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHhccCCccCCCC-------------CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 2222222211111 123577899999999999997 89999876
No 40
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=324.19 Aligned_cols=263 Identities=23% Similarity=0.361 Sum_probs=199.8
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhc--cCCCCcceeeEEEEecC----ceeEEEeccCC
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGK--IRHPNIVSLRAYFWSVD----EKLLIYDYIPN 447 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~lV~e~~~~ 447 (686)
+||+|+||.||||.+.+ +.||||++... +.+.|..|-+|.+. ++|+||++++++-.... +++||+||.+.
T Consensus 217 li~~Grfg~V~KaqL~~-~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k 292 (534)
T KOG3653|consen 217 LIGRGRFGCVWKAQLDN-RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK 292 (534)
T ss_pred HhhcCccceeehhhccC-ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence 69999999999999975 88999999763 44668777777664 58999999999877655 78999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC------CCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS------PKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|+|.++|..+ .++|....+|+..+++||+|||+.. +.+|+|||||++|||+.+|+++.|+|||+|..
T Consensus 293 GsL~dyL~~n-------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 293 GSLCDYLKAN-------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred CcHHHHHHhc-------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 9999999875 5899999999999999999999743 34799999999999999999999999999998
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC-CC-----CcchHHHHHHHHHHHHhCCCCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PT-----QKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~sDVwSlGvvl~elltG~~P~ 595 (686)
+..+... ......+||.+|||||++.+.. +. .+.||||+|.|||||+++..-+
T Consensus 366 ~~p~~~~---------------------~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~ 424 (534)
T KOG3653|consen 366 LEPGKPQ---------------------GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDA 424 (534)
T ss_pred ecCCCCC---------------------cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 8754322 1223478999999999987642 22 3689999999999999965433
Q ss_pred c------------ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042348 596 I------------QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663 (686)
Q Consensus 596 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 663 (686)
. ..-...-.+.+ ++..+-.++..+.+.|.... ...+..+.+.+..||+.||+.|-|+.=|-+
T Consensus 425 ~~~~vp~Yqlpfe~evG~hPt~e~-mq~~VV~kK~RP~~p~~W~~-----h~~~~~l~et~EeCWDhDaeARLTA~Cv~e 498 (534)
T KOG3653|consen 425 DPGPVPEYQLPFEAEVGNHPTLEE-MQELVVRKKQRPKIPDAWRK-----HAGMAVLCETIEECWDHDAEARLTAGCVEE 498 (534)
T ss_pred cCCCCCcccCchhHHhcCCCCHHH-HHHHHHhhccCCCChhhhhc-----CccHHHHHHHHHHHcCCchhhhhhhHHHHH
Confidence 1 11011111222 22222222222333232222 234567889999999999999999999999
Q ss_pred HHhcccccchh
Q 042348 664 SLDRVNISTEQ 674 (686)
Q Consensus 664 ~L~~i~~~~~~ 674 (686)
++.++....+.
T Consensus 499 R~~~l~~~~~~ 509 (534)
T KOG3653|consen 499 RMAELMMLWED 509 (534)
T ss_pred HHHHHhccCCc
Confidence 98887765543
No 41
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.3e-39 Score=340.90 Aligned_cols=241 Identities=22% Similarity=0.331 Sum_probs=194.0
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+||+|+||.||++... ++..||+|.+... .......+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 5899999999999865 5889999998653 22334567889999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 82 L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--- 149 (323)
T cd05595 82 LFFHLSRE------RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--- 149 (323)
T ss_pred HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC---
Confidence 99988754 358999999999999999999999 899999999999999999999999999987432111
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||...... ...
T Consensus 150 --------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~ 204 (323)
T cd05595 150 --------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLF 204 (323)
T ss_pred --------------------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 0112345788899999999889999999999999999999999999543221 122
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
..+.......+.. ....+.+++.+||+.||++|| ++.+++++
T Consensus 205 ~~~~~~~~~~p~~-------------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 205 ELILMEEIRFPRT-------------LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHhcCCCCCCCC-------------CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 2222222211111 123567899999999999998 88888765
No 42
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=326.70 Aligned_cols=256 Identities=25% Similarity=0.340 Sum_probs=192.1
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecC-----ceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD-----EKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lV~e~~~ 446 (686)
+++|.|+||.||+|.... ++.||||++-... +--.+|+.+|++++|||||++..+|.... ...+|||||+
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP 105 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP 105 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence 579999999999998764 6899999985432 23357999999999999999999887543 2358999998
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-CCeEEeecCcccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-MEPHISDFGLARLADIA 525 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~~~~~ 525 (686)
. +|.+.++..... .+.++.-.++-+..||.+||+|||+ .+|+||||||+|+|+|.+ |.+||||||.|+.+..+
T Consensus 106 ~-tL~~~~r~~~~~--~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 106 E-TLYRVIRHYTRA--NQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred H-HHHHHHHHHhhc--CCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 7 999999853211 1457778889999999999999999 899999999999999966 89999999999988655
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
+.. .+...|.+|+|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+... .+
T Consensus 180 epn------------------------iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~--~d 233 (364)
T KOG0658|consen 180 EPN------------------------ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS--VD 233 (364)
T ss_pred CCc------------------------eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH--HH
Confidence 421 23445778999999877 5699999999999999999999998865332 22
Q ss_pred HHHHHHHHHhhc---------CCcccccCcccccCC----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDR---------KPMTDILDPFLAHDL----DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~---------~~~~~~~d~~l~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+-.++... ....+.-.|.+.... .......+.++++.++++++|.+|.++.|++.+
T Consensus 234 QL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 234 QLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred HHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 222222222110 000111112222111 112344578899999999999999999999876
No 43
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9.5e-40 Score=336.98 Aligned_cols=239 Identities=21% Similarity=0.286 Sum_probs=195.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 86 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGG 86 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCC
Confidence 46999999999999876 58899999986432 223456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~-- 155 (291)
T cd05612 87 ELFSYLRNS------GRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT-- 155 (291)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc--
Confidence 999999765 358899999999999999999999 899999999999999999999999999987543110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
....||..|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 156 ------------------------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~ 206 (291)
T cd05612 156 ------------------------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGI 206 (291)
T ss_pred ------------------------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHH
Confidence 123467789999999988899999999999999999999999954322 222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~ 664 (686)
.+.+.......+..+ ...+.+++.+||+.||.+||+ +.|++++
T Consensus 207 ~~~i~~~~~~~~~~~-------------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 207 YEKILAGKLEFPRHL-------------DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHHHHhCCcCCCccC-------------CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 333333322222111 235778999999999999995 8888877
No 44
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.1e-39 Score=327.84 Aligned_cols=250 Identities=23% Similarity=0.392 Sum_probs=197.2
Q ss_pred hcccCccCceEEEEEEeC----CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALN----NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
...||+|+||.||+|.+. .+..||+|.++... ......+.+|+..+++++||||+++++++...+..++||||++
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 89 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMS 89 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCC
Confidence 346999999999999753 35689999987653 2334578999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++.+++.++.|++.||+|||+ ++++||||||+||+++.++.+|++|||.+.......
T Consensus 90 ~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 90 NGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred CCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 999999997643 358999999999999999999999 899999999999999999999999999875422110
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
. .......++..|+|||.+.+..++.++|||||||++||+++ |+.||......
T Consensus 162 ~----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---- 215 (266)
T cd05064 162 I----------------------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---- 215 (266)
T ss_pred h----------------------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----
Confidence 0 00011233567999999988999999999999999999875 99999543221
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
..++.+... ...+ . .......+.+++.+||+.+|++||++.||.+.|+++
T Consensus 216 -~~~~~~~~~-~~~~---~--------~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 216 -DVIKAVEDG-FRLP---A--------PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -HHHHHHHCC-CCCC---C--------CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 122222221 1111 0 112334678899999999999999999999998764
No 45
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=341.17 Aligned_cols=239 Identities=20% Similarity=0.288 Sum_probs=195.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 103 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGG 103 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCC
Confidence 46999999999999876 57899999986532 233456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 104 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 172 (329)
T PTZ00263 104 ELFTHLRKA------GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT-- 172 (329)
T ss_pred hHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc--
Confidence 999999764 357889999999999999999999 899999999999999999999999999997543111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
....||..|+|||++.+..++.++|||||||++|||++|+.||..... .+.
T Consensus 173 ------------------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~ 223 (329)
T PTZ00263 173 ------------------------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-----FRI 223 (329)
T ss_pred ------------------------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-----HHH
Confidence 123567789999999988899999999999999999999999954321 222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~ 664 (686)
...+.......+..+ ...+.+++.+||+.||++||+ +++++.+
T Consensus 224 ~~~i~~~~~~~p~~~-------------~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 224 YEKILAGRLKFPNWF-------------DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHHHhcCCcCCCCCC-------------CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 333333322222211 124678999999999999997 6777766
No 46
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1e-38 Score=323.01 Aligned_cols=246 Identities=23% Similarity=0.409 Sum_probs=197.4
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||++...++..+|+|.+..... ..+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 88 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLN 88 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHH
Confidence 35999999999999998888899998865432 34678999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||.++.......
T Consensus 89 ~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~----- 155 (256)
T cd05114 89 YLRQRQ-----GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY----- 155 (256)
T ss_pred HHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCce-----
Confidence 997643 348899999999999999999999 8999999999999999999999999999875432110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+.+..
T Consensus 156 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~-----~~~~~~ 213 (256)
T cd05114 156 -----------------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN-----YEVVEM 213 (256)
T ss_pred -----------------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Confidence 00111223456999999988889999999999999999999 8999954322 222333
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
+....... .+. .....+.+++.+||+.+|++||++.|+++.|.
T Consensus 214 i~~~~~~~----~~~--------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 214 ISRGFRLY----RPK--------LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHCCCCCC----CCC--------CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 33222111 111 11235789999999999999999999998763
No 47
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.6e-39 Score=337.69 Aligned_cols=241 Identities=21% Similarity=0.309 Sum_probs=193.5
Q ss_pred ccCccCceEEEEEEe----CCCceEEEEEcCCCC----ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVAL----NNEEAVAVRRLGNGG----WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
.||+|+||.||+++. ..++.||||.+.... ......+..|++++++++||||+++++++...+..++||||+
T Consensus 3 ~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 82 (323)
T cd05584 3 VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYL 82 (323)
T ss_pred eeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCC
Confidence 699999999999975 357889999986531 223356788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 83 SGGELFMHLERE------GIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred CCchHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 999999999754 357888899999999999999999 89999999999999999999999999998743211
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
. .......||..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 154 ~-----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~----- 205 (323)
T cd05584 154 G-----------------------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR----- 205 (323)
T ss_pred C-----------------------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----
Confidence 1 011234578889999999988899999999999999999999999954322
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
...+..+.......+.. ....+.+++.+||+.||++|| ++.+++++
T Consensus 206 ~~~~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 206 KKTIDKILKGKLNLPPY-------------LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHHHHHHHcCCCCCCCC-------------CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 22233333332222211 123577899999999999999 78888775
No 48
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=325.33 Aligned_cols=251 Identities=21% Similarity=0.311 Sum_probs=195.2
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCc--------------cchHHHHHHHHHHhccCCCCcceeeEEEEec--C
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--------------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--D 436 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~ 436 (686)
-||+|.||.|-+|+.. +++.||||++.+... ...+...+||.+|++++|||||+++.+..+. +
T Consensus 104 eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~ 183 (576)
T KOG0585|consen 104 EIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESD 183 (576)
T ss_pred hhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccC
Confidence 4899999999999865 688999999865321 1235788999999999999999999998875 5
Q ss_pred ceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeec
Q 042348 437 EKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDF 516 (686)
Q Consensus 437 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 516 (686)
..|||+|||..|.+...-... ..+++.+++++++++..||+|||. ++||||||||+|+|++++|++||+||
T Consensus 184 ~~YlVley~s~G~v~w~p~d~------~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~VKIsDF 254 (576)
T KOG0585|consen 184 KLYLVLEYCSKGEVKWCPPDK------PELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGTVKISDF 254 (576)
T ss_pred ceEEEEEeccCCccccCCCCc------ccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCcEEeecc
Confidence 789999999988876532211 238999999999999999999999 99999999999999999999999999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC----CCCcchHHHHHHHHHHHHhCC
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK----PTQKWDIYSYGVILLEMISGK 592 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwSlGvvl~elltG~ 592 (686)
|.+.....+..... .......+||+.|+|||...++. .+.+.||||+||+||.|+.|+
T Consensus 255 GVs~~~~~~~~~~~------------------d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~ 316 (576)
T KOG0585|consen 255 GVSNEFPQGSDEGS------------------DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQ 316 (576)
T ss_pred ceeeecccCCcccc------------------HHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhcc
Confidence 99976543311100 02234478899999999886632 467899999999999999999
Q ss_pred CCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 593 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
.||... ...+....+....-..++ .++....+.+|+.++|++||++|.+..+|..|.--
T Consensus 317 ~PF~~~-----~~~~l~~KIvn~pL~fP~-----------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 317 LPFFDD-----FELELFDKIVNDPLEFPE-----------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred CCcccc-----hHHHHHHHHhcCcccCCC-----------cccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 999432 233444455444322221 11344567899999999999999999999887633
No 49
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.6e-40 Score=335.83 Aligned_cols=244 Identities=23% Similarity=0.355 Sum_probs=206.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCc-eeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE-KLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~lV~e~~~~g 448 (686)
+.+|+|+||.++.++.+ +...+++|.+... ....++...+|+.++++++|||||.+.+.|..++. .+|||+||+||
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg 89 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGG 89 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCC
Confidence 46999999999998865 4678999988654 33445578999999999999999999999999988 89999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
++.+.|.+..+ ..++++.+.+|+.|++.|+.|||+ +.|+|||||+.||++..+..+||+|||+|+.+....
T Consensus 90 ~l~~~i~~~k~----~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~-- 160 (426)
T KOG0589|consen 90 DLAQLIKEQKG----VLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED-- 160 (426)
T ss_pred CHHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCch--
Confidence 99999998764 468999999999999999999998 899999999999999999999999999999876432
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......+||+.||.||.+.+.+|+.|+|||||||++|||++-+++|... +....
T Consensus 161 ---------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-----~m~~L 214 (426)
T KOG0589|consen 161 ---------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-----NMSEL 214 (426)
T ss_pred ---------------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-----chHHH
Confidence 1223567888999999999999999999999999999999999999543 33344
Q ss_pred HHHHHhhc-CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDR-KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+..+.... .+++ .....++..++..|++.+|+.||++.+++.+
T Consensus 215 i~ki~~~~~~Plp-------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 215 ILKINRGLYSPLP-------------SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhccCCCCC-------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 45554443 2221 2234568889999999999999999999887
No 50
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.3e-39 Score=341.32 Aligned_cols=256 Identities=25% Similarity=0.337 Sum_probs=197.4
Q ss_pred hcccCccCceEEEEEEe------CCCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVAL------NNEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
.+.||+|+||.||+|.. .++..||||+++... ....+.+.+|++++..+ +||||++++++|...+..++|||
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E 119 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITE 119 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeeh
Confidence 45799999999999963 235689999987542 23446788999999999 89999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCcc--------------------------------------------------------------
Q 042348 444 YIPNGSLATAIHGKAGII-------------------------------------------------------------- 461 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~-------------------------------------------------------------- 461 (686)
||++|+|.++++......
T Consensus 120 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (375)
T cd05104 120 YCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDV 199 (375)
T ss_pred hccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccccc
Confidence 999999999997543110
Q ss_pred -------ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccccc
Q 042348 462 -------SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWE 534 (686)
Q Consensus 462 -------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 534 (686)
....+++..+.+++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~------ 270 (375)
T cd05104 200 TSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY------ 270 (375)
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc------
Confidence 01257899999999999999999999 89999999999999999999999999999755322110
Q ss_pred ccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHHHH
Q 042348 535 QSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLIL 613 (686)
Q Consensus 535 ~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~ 613 (686)
.......++..|+|||++.+..++.++|||||||++|||++ |..||....... .... . .
T Consensus 271 ---------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~---~-~ 330 (375)
T cd05104 271 ---------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYK---M-I 330 (375)
T ss_pred ---------------cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHH---H-H
Confidence 00111234567999999998899999999999999999998 888985432211 1111 1 1
Q ss_pred hhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 614 EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 614 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
....... .+. ....++.+++.+||+.||++||++.||++.|++
T Consensus 331 ~~~~~~~---~~~--------~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 331 KEGYRML---SPE--------CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HhCccCC---CCC--------CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 1111100 010 112367899999999999999999999999986
No 51
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4e-39 Score=336.70 Aligned_cols=241 Identities=21% Similarity=0.297 Sum_probs=192.9
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||||.+... .....+.+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 5899999999999875 5789999998653 223345677899998877 6999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~i~~~------~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-- 150 (320)
T cd05590 82 DLMFHIQKS------RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-- 150 (320)
T ss_pred hHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--
Confidence 999998764 358999999999999999999999 899999999999999999999999999987432111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~ 204 (320)
T cd05590 151 ---------------------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDL 204 (320)
T ss_pred ---------------------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHH
Confidence 011234578889999999988899999999999999999999999954322 222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM------RHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~ev~~~ 664 (686)
...+.......+.. ....+.+++.+||+.||++||++ ++++++
T Consensus 205 ~~~i~~~~~~~~~~-------------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 205 FEAILNDEVVYPTW-------------LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred HHHHhcCCCCCCCC-------------CCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 33333322221111 12357789999999999999998 566554
No 52
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-39 Score=300.03 Aligned_cols=243 Identities=26% Similarity=0.336 Sum_probs=202.0
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
+..||+|.||.||.|+.+ ++-.||+|++.+.. .....++.+|+++-+.++||||+++|++|.+....|+++||.++
T Consensus 27 gr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~ 106 (281)
T KOG0580|consen 27 GRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPR 106 (281)
T ss_pred cccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCC
Confidence 457999999999999876 56789999986642 22346789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|++...|.+... ..+++.....++.|+|.||.|+|. ++||||||||+|+|++.++..||+|||-+-....
T Consensus 107 gel~k~L~~~~~----~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~--- 176 (281)
T KOG0580|consen 107 GELYKDLQEGRM----KRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 176 (281)
T ss_pred chHHHHHHhccc----ccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecCC---
Confidence 999999986654 468888889999999999999999 9999999999999999999999999998754321
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......+||..|.+||+..+..++..+|+|++|++.||++.|.+||..... .+
T Consensus 177 ----------------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-----~e 229 (281)
T KOG0580|consen 177 ----------------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-----SE 229 (281)
T ss_pred ----------------------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-----HH
Confidence 112345788999999999999999999999999999999999999965432 23
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+.+..-+..++.. ......+++.+|+.++|.+|.+..|++++
T Consensus 230 tYkrI~k~~~~~p~~-------------is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 230 TYKRIRKVDLKFPST-------------ISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred HHHHHHHccccCCcc-------------cChhHHHHHHHHhccCccccccHHHHhhh
Confidence 344444433322221 12256789999999999999999999876
No 53
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.5e-39 Score=339.28 Aligned_cols=239 Identities=21% Similarity=0.265 Sum_probs=193.8
Q ss_pred cccCccCceEEEEEEeCC--CceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALNN--EEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|.... +..||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~ 115 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIG 115 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999998643 368999988543 223345688999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 116 g~L~~~i~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~-- 184 (340)
T PTZ00426 116 GEFFTFLRRN------KRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR-- 184 (340)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC--
Confidence 9999999765 358999999999999999999999 89999999999999999999999999999754311
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.....||..|+|||++.+..++.++|||||||++|||++|+.||..... ..
T Consensus 185 ------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~ 235 (340)
T PTZ00426 185 ------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-----LL 235 (340)
T ss_pred ------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-----HH
Confidence 1123567789999999888899999999999999999999999954322 12
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
..+.+.......+..+ ...+.+++.+|++.||++|+ +++|++++
T Consensus 236 ~~~~i~~~~~~~p~~~-------------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 236 IYQKILEGIIYFPKFL-------------DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHHHhcCCCCCCCCC-------------CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 2233333222211111 12467899999999999995 88888876
No 54
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=315.65 Aligned_cols=275 Identities=23% Similarity=0.301 Sum_probs=212.8
Q ss_pred ccCccCceEEEEEEeCC-CceEEEEEcCCCCcc---chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQ---RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||.|.-|+||.++..+ +...|+|++.+.... ...+.+.|-+||+.++||.++.+|+.|+.++..++|||||+||+
T Consensus 84 ~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGd 163 (459)
T KOG0610|consen 84 RLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGD 163 (459)
T ss_pred HcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCcc
Confidence 69999999999999875 478999999875433 34568889999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|..+++.+.+ +.+++..+.-++.+|+-||+|||- .|||.|||||+||||.++|++.|+||.++..........
T Consensus 164 L~~LrqkQp~----~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~ 236 (459)
T KOG0610|consen 164 LHSLRQKQPG----KRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV 236 (459)
T ss_pred HHHHHhhCCC----CccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence 9999998765 679999999999999999999999 899999999999999999999999999987653211000
Q ss_pred cccc----------cc--ccc-------C-C-------------CCCCCccccccccCCCCCccccCcccccCCCCCCcc
Q 042348 530 EVHW----------EQ--STT-------G-T-------------PLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKW 576 (686)
Q Consensus 530 ~~~~----------~~--~~~-------g-~-------------~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~s 576 (686)
.... .. ..+ + + |...+.......++.+||-.|.|||++.+...+.++
T Consensus 237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV 316 (459)
T KOG0610|consen 237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV 316 (459)
T ss_pred ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence 0000 00 000 0 0 000001111345678999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC
Q 042348 577 DIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP 656 (686)
Q Consensus 577 DVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 656 (686)
|+|+|||++|||+.|+.||.+.+..+. ...++......++. ......+.+||.+.|.+||.+|.
T Consensus 317 DWWtfGIflYEmLyG~TPFKG~~~~~T-----l~NIv~~~l~Fp~~-----------~~vs~~akDLIr~LLvKdP~kRl 380 (459)
T KOG0610|consen 317 DWWTFGIFLYEMLYGTTPFKGSNNKET-----LRNIVGQPLKFPEE-----------PEVSSAAKDLIRKLLVKDPSKRL 380 (459)
T ss_pred hHHHHHHHHHHHHhCCCCcCCCCchhh-----HHHHhcCCCcCCCC-----------CcchhHHHHHHHHHhccChhhhh
Confidence 999999999999999999977655432 34444433222211 12345678999999999999998
Q ss_pred C----HHHHHHH--Hhccccc
Q 042348 657 S----MRHVCDS--LDRVNIS 671 (686)
Q Consensus 657 s----~~ev~~~--L~~i~~~ 671 (686)
. +.||-+| .+.++.+
T Consensus 381 g~~rGA~eIK~HpFF~gVnWa 401 (459)
T KOG0610|consen 381 GSKRGAAEIKRHPFFEGVNWA 401 (459)
T ss_pred ccccchHHhhcCccccCCChh
Confidence 8 8888776 4555543
No 55
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.9e-39 Score=335.85 Aligned_cols=241 Identities=22% Similarity=0.306 Sum_probs=193.5
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+||+|+||.||+|+.. +++.||+|.+.... ....+.+..|.+++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 5899999999999876 47899999986532 23345677899998876 7999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~- 151 (321)
T cd05591 82 DLMFQIQRS------RKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV- 151 (321)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-
Confidence 999998754 358899999999999999999999 8999999999999999999999999999874321110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 152 ----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-----~~~ 204 (321)
T cd05591 152 ----------------------TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-----DDL 204 (321)
T ss_pred ----------------------cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-----HHH
Confidence 11234578889999999988999999999999999999999999954332 222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-------CHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-------SMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------s~~ev~~~ 664 (686)
...+.......+.. ...++.+++.+||+.||++|| ++.+++++
T Consensus 205 ~~~i~~~~~~~p~~-------------~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 205 FESILHDDVLYPVW-------------LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHcCCCCCCCC-------------CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 33333332211111 123577899999999999999 78888766
No 56
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.9e-39 Score=338.78 Aligned_cols=242 Identities=23% Similarity=0.324 Sum_probs=193.9
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||+|+||.||++... +++.||+|.+... .......+..|++++..++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 5899999999999864 6889999998653 22334567889999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++..+..++.|++.||+|||+. ++|+||||||+|||++.++.+||+|||+++......
T Consensus 82 L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--- 150 (325)
T cd05594 82 LFFHLSRE------RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--- 150 (325)
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC---
Confidence 99988754 3589999999999999999999952 589999999999999999999999999987432111
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......||..|+|||++.+..++.++|||||||++|||+||+.||..... ....
T Consensus 151 --------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----~~~~ 205 (325)
T cd05594 151 --------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLF 205 (325)
T ss_pred --------------------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----HHHH
Confidence 011234578889999999988999999999999999999999999954322 1222
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
..+.......+.. ...++.+++.+||+.||++|+ ++.+++++
T Consensus 206 ~~i~~~~~~~p~~-------------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 206 ELILMEEIRFPRT-------------LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHhcCCCCCCCC-------------CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 2222222222111 123577899999999999996 89999876
No 57
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=9.5e-39 Score=340.53 Aligned_cols=257 Identities=26% Similarity=0.334 Sum_probs=197.4
Q ss_pred hcccCccCceEEEEEEeC------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVALN------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
.+.||+|+||.||+|... ++..||||++.... ......+.+|+++++.+ +|+|||+++++|...+..++|||
T Consensus 43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~e 122 (374)
T cd05106 43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITE 122 (374)
T ss_pred hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHh
Confidence 457999999999998742 23579999997543 23345688999999999 89999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCc---------------------------------------------------------------
Q 042348 444 YIPNGSLATAIHGKAGI--------------------------------------------------------------- 460 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~--------------------------------------------------------------- 460 (686)
|+++|+|.++++.....
T Consensus 123 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (374)
T cd05106 123 YCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEED 202 (374)
T ss_pred hccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhc
Confidence 99999999998643210
Q ss_pred -cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccC
Q 042348 461 -ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTG 539 (686)
Q Consensus 461 -~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g 539 (686)
.....+++.++.+|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++........
T Consensus 203 ~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~----------- 268 (374)
T cd05106 203 TEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY----------- 268 (374)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce-----------
Confidence 011357889999999999999999999 89999999999999999999999999999754321100
Q ss_pred CCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHHHHhhcCC
Q 042348 540 TPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKP 618 (686)
Q Consensus 540 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 618 (686)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||....... . ..........
T Consensus 269 ----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~----~~~~~~~~~~ 333 (374)
T cd05106 269 ----------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-K----FYKMVKRGYQ 333 (374)
T ss_pred ----------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-H----HHHHHHcccC
Confidence 00111234567999999988889999999999999999997 999995533211 1 1111111111
Q ss_pred cccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 619 MTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 619 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.. .+. ....++.+++.+||+.||++|||+.+|++.|+++
T Consensus 334 ~~---~~~--------~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 334 MS---RPD--------FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred cc---CCC--------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00 010 0124678899999999999999999999999875
No 58
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-39 Score=317.63 Aligned_cols=241 Identities=22% Similarity=0.350 Sum_probs=203.3
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|.||.|-+|.. ..|+.||||.+++. +.++.-.+.+||+||+.++||||+.+|.+|+..+...+||||..+|
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~G 138 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGG 138 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCc
Confidence 4699999999999975 67999999999765 4455567889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
.|+|++.++ +.|++.+...+++||..|+.|+|. ++++|||||.+|||+|.++++||+|||++.++....
T Consensus 139 eLYDYiSer------~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k-- 207 (668)
T KOG0611|consen 139 ELYDYISER------GSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK-- 207 (668)
T ss_pred cHHHHHHHh------ccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhcccc--
Confidence 999999987 469999999999999999999999 999999999999999999999999999998775432
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
..+..+|++-|.+||...+.+| ++.+|-||+||+||.|+.|..||++. +...
T Consensus 208 ----------------------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~ 260 (668)
T KOG0611|consen 208 ----------------------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKR 260 (668)
T ss_pred ----------------------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHH
Confidence 3445667777999999999887 67899999999999999999999543 3334
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.++.+..+...-++ .+....-|+.+||..||++|.|+.+|..+.
T Consensus 261 lvrQIs~GaYrEP~--------------~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 261 LVRQISRGAYREPE--------------TPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred HHHHhhcccccCCC--------------CCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 45555444322111 112344688899999999999999999885
No 59
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.1e-38 Score=332.91 Aligned_cols=240 Identities=23% Similarity=0.329 Sum_probs=189.2
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||+|.++... ....+.+..|..++... +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5899999999999875 47789999986531 22334566677777654 8999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~------~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-- 150 (316)
T cd05592 82 DLMFHIQSS------GRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-- 150 (316)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--
Confidence 999998754 358899999999999999999999 899999999999999999999999999987432111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... .+.
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~ 204 (316)
T cd05592 151 ---------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DEL 204 (316)
T ss_pred ---------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHH
Confidence 011234578889999999988899999999999999999999999954332 122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR-HVCD 663 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ev~~ 663 (686)
...+.......+.. ...++.+++.+||+.||++||++. ++.+
T Consensus 205 ~~~i~~~~~~~~~~-------------~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 205 FDSILNDRPHFPRW-------------ISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred HHHHHcCCCCCCCC-------------CCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 22232222111111 123467899999999999999875 5544
No 60
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-38 Score=333.22 Aligned_cols=258 Identities=21% Similarity=0.267 Sum_probs=195.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||++... ++..||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 90 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 90 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcH
Confidence 36999999999999876 57889999886542 23346799999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++......
T Consensus 91 ~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 158 (331)
T cd06649 91 DQVLKEA------KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---- 158 (331)
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccc----
Confidence 9999764 3588999999999999999999982 259999999999999999999999999987542111
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
.....||..|+|||++.+..++.++|||||||++|||+||+.||......+ +...+.
T Consensus 159 ---------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~ 215 (331)
T cd06649 159 ---------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFG 215 (331)
T ss_pred ---------------------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhc
Confidence 112356778999999998899999999999999999999999995432211 111111
Q ss_pred HHHh-hcCCcccc----------------------------cCcccc---cCCCcHHHHHHHHHHHHhccccCCCCCCCH
Q 042348 611 LILE-DRKPMTDI----------------------------LDPFLA---HDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658 (686)
Q Consensus 611 ~~~~-~~~~~~~~----------------------------~d~~l~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 658 (686)
.... ........ .+.... ..........++.+++.+||+.||++|||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~ 295 (331)
T cd06649 216 RPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADL 295 (331)
T ss_pred ccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCH
Confidence 0000 00000000 000000 000001123468899999999999999999
Q ss_pred HHHHHHH
Q 042348 659 RHVCDSL 665 (686)
Q Consensus 659 ~ev~~~L 665 (686)
.|++++-
T Consensus 296 ~ell~h~ 302 (331)
T cd06649 296 KMLMNHT 302 (331)
T ss_pred HHHhcCh
Confidence 9999874
No 61
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=9.6e-39 Score=335.06 Aligned_cols=246 Identities=20% Similarity=0.340 Sum_probs=192.6
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+||+|+||.||+|... +++.||+|.+... .....+.+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 5899999999999875 5788999998753 223345678899988877 8999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|..++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~------~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-- 150 (329)
T cd05618 82 DLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-- 150 (329)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--
Confidence 999988654 358999999999999999999999 899999999999999999999999999987432111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc---chhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM---ELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~---~~~~ 605 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~ 209 (329)
T cd05618 151 ---------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 209 (329)
T ss_pred ---------------------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccccc
Confidence 0112345788899999999999999999999999999999999999532211 1111
Q ss_pred HHHHHH-HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC------HHHHHHH
Q 042348 606 VQWIQL-ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS------MRHVCDS 664 (686)
Q Consensus 606 ~~~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~ev~~~ 664 (686)
..++.. +......++. .....+.+++.+||+.||++||+ +.+++++
T Consensus 210 ~~~~~~~i~~~~~~~p~-------------~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 210 EDYLFQVILEKQIRIPR-------------SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHHHHHHhcCCCCCCC-------------CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 222222 2222211111 11235678999999999999998 4677655
No 62
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=314.33 Aligned_cols=243 Identities=21% Similarity=0.397 Sum_probs=203.9
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
.||+|+||.|||+.++ .|..||||.+... .+.+++.+|+.+|++++.|++|++||.|......++|||||..|++.+
T Consensus 40 KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSD 117 (502)
T KOG0574|consen 40 KLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISD 117 (502)
T ss_pred HhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHH
Confidence 5999999999999865 6899999999764 356789999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
+++.++ ++|++.++..+++..++||+|||. ..-||||||+.|||++.+|.+||+|||.|..+.+..
T Consensus 118 I~R~R~-----K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM------ 183 (502)
T KOG0574|consen 118 IMRARR-----KPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM------ 183 (502)
T ss_pred HHHHhc-----CCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhH------
Confidence 999876 689999999999999999999999 667999999999999999999999999997664322
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLI 612 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 612 (686)
...+...||++|||||++..-.|+.++||||+|++..||..|++||....+... +
T Consensus 184 -----------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA--------I 238 (502)
T KOG0574|consen 184 -----------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA--------I 238 (502)
T ss_pred -----------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce--------e
Confidence 233456788899999999999999999999999999999999999965444321 0
Q ss_pred HhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 613 LEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 613 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+.- +..-.|.+. .++....++.+++.+||-+.|++|-|+.+++++
T Consensus 239 FMI----PT~PPPTF~---KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 239 FMI----PTKPPPTFK---KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred Eec----cCCCCCCCC---ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 000 000011111 123445678899999999999999999999887
No 63
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-38 Score=332.25 Aligned_cols=240 Identities=22% Similarity=0.329 Sum_probs=190.0
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||||.++... ......+..|..++... +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 5899999999999876 47889999986531 22345567788888765 8999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05619 82 DLMFHIQSC------HKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA- 151 (316)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-
Confidence 999999754 358899999999999999999999 8999999999999999999999999999874321110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... .+.
T Consensus 152 ----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~ 204 (316)
T cd05619 152 ----------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-----EEL 204 (316)
T ss_pred ----------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH-----HHH
Confidence 11234577889999999988999999999999999999999999954322 122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR-HVCD 663 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ev~~ 663 (686)
.+.+.......+.. ....+.+++.+||+.||++||++. ++.+
T Consensus 205 ~~~i~~~~~~~~~~-------------~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 205 FQSIRMDNPCYPRW-------------LTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHHHhCCCCCCcc-------------CCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 22222221111111 123567899999999999999997 6654
No 64
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.5e-38 Score=327.58 Aligned_cols=258 Identities=19% Similarity=0.272 Sum_probs=191.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... ++..||+|.+..... .....+.+|++++++++||||+++++++...+..++||||++ |+|
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l 89 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDL 89 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cCH
Confidence 46999999999999875 578999999865422 233567899999999999999999999999999999999997 499
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 90 ~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--- 158 (288)
T cd07871 90 KQYLDNCG-----NLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK--- 158 (288)
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc---
Confidence 99887543 357899999999999999999999 8999999999999999999999999999875431110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......++..|+|||.+.+ ..++.++||||+||++|||+||+.||......+ ....+
T Consensus 159 --------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~--~~~~~ 216 (288)
T cd07871 159 --------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE--ELHLI 216 (288)
T ss_pred --------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH
Confidence 1122356778999998865 568999999999999999999999995433211 11111
Q ss_pred HHHHhhcC--Ccccc---------cCcccccCCC---cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRK--PMTDI---------LDPFLAHDLD---KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~--~~~~~---------~d~~l~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ .++.+ ..+....... ......+..+++.+||+.||.+|||++|++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 217 FRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred HHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11111000 00000 0000000000 00112357799999999999999999999864
No 65
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.2e-39 Score=326.25 Aligned_cols=248 Identities=31% Similarity=0.532 Sum_probs=190.5
Q ss_pred cccCccCceEEEEEEeC-----CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-----NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||.|.||.||+|.+. .+..|+||.++... ....+.|.+|++.+++++||||++++|++...+..++||||++
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~ 84 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCP 84 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--T
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccc
Confidence 46999999999999987 25689999996543 3346889999999999999999999999998888999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.++++.... ..+++..+.+|+.||+.||+|||+ ++++||||+++||++++++.+||+|||+++......
T Consensus 85 ~g~L~~~L~~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 85 GGSLDDYLKSKNK----EPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp TEBHHHHHHHTCT----TTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccc----cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999998622 468999999999999999999999 899999999999999999999999999998652111
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. ...........|+|||.+....++.++||||||+++||+++ |+.||.....
T Consensus 158 ~~---------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~----- 211 (259)
T PF07714_consen 158 KY---------------------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN----- 211 (259)
T ss_dssp SE---------------------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-----
T ss_pred cc---------------------cccccccccccccccccccccccccccccccccccccccccccccccccccc-----
Confidence 10 01112234567999999988889999999999999999999 7888854322
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.+........... .. .......+.+++.+||+.+|++||+++++++.|
T Consensus 212 ~~~~~~~~~~~~~--~~----------~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 212 EEIIEKLKQGQRL--PI----------PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHHHTTEET--TS----------BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccccccccccc--ee----------ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 2223333222211 10 011234577999999999999999999999876
No 66
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.1e-38 Score=335.54 Aligned_cols=245 Identities=20% Similarity=0.268 Sum_probs=196.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 86 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGG 86 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999976 47899999986532 233456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---- 153 (333)
T cd05600 87 DFRTLLNNL------GVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---- 153 (333)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc----
Confidence 999999754 358899999999999999999999 8999999999999999999999999999875431
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||......+ .
T Consensus 154 ----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-----~ 206 (333)
T cd05600 154 ----------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-----T 206 (333)
T ss_pred ----------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-----H
Confidence 1123457788999999998899999999999999999999999995432211 1
Q ss_pred HHHHHhhcCCc--ccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPM--TDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+....... +...++. .....++.+++.+||..+|++||++.|++++
T Consensus 207 ~~~i~~~~~~~~~~~~~~~~-------~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 207 WENLKYWKETLQRPVYDDPR-------FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHhccccccCCCCCccc-------cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 12221111110 1111110 1123467789999999999999999999987
No 67
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=348.52 Aligned_cols=257 Identities=21% Similarity=0.278 Sum_probs=203.7
Q ss_pred hcccCccCceEEEEEEeCCC-ceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEE-Ee---c---CceeEEE
Q 042348 372 AFLLGKSTIGIVYKVALNNE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYF-WS---V---DEKLLIY 442 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~-~~---~---~~~~lV~ 442 (686)
.++|.+|||+.||.|....+ ..+|+|++-..++...+...+||++|++|+ |+|||.+++.. .. . -+.+|.|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLm 121 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLM 121 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeeh
Confidence 45799999999999998776 999999998777788889999999999996 99999999943 21 1 2568999
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
|||.+|+|-|++..+.. ..|++.++++|+.|+++|+++||.+. .+|||||||-+||||+.++..||||||.|.--
T Consensus 122 EyC~gg~Lvd~mn~Rlq----~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 122 EYCKGGSLVDFMNTRLQ----TRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred hhccCCcHHHHHHHHHh----ccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 99999999999987653 45999999999999999999999976 47999999999999999999999999988632
Q ss_pred ccccCCccccccccccCCCCCCCcccc---ccccCCCCCccccCcccc---cCCCCCCcchHHHHHHHHHHHHhCCCCcc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEF---TALNSTTSRSYYQAPEAS---KVRKPTQKWDIYSYGVILLEMISGKLPMI 596 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwSlGvvl~elltG~~P~~ 596 (686)
..... ..++. ...-...-|+.|+|||++ .+..+++|+|||||||+||-|+....||.
T Consensus 197 ~~~~~-----------------~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe 259 (738)
T KOG1989|consen 197 ILSPT-----------------SAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFE 259 (738)
T ss_pred cCCCc-----------------cHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcC
Confidence 11100 00111 111223457889999986 45678999999999999999999999995
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
..+.-. ++.+...++. .+.....+.+||..||+.||++||++-||++.+.++..
T Consensus 260 ~sg~la---------Ilng~Y~~P~-----------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 260 ESGKLA---------ILNGNYSFPP-----------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred cCccee---------EEeccccCCC-----------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 543211 1222222211 12356678899999999999999999999999988763
No 68
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.4e-38 Score=332.52 Aligned_cols=241 Identities=24% Similarity=0.331 Sum_probs=193.2
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||||.+.... ......+..|++++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5899999999999876 47889999987532 23345677899999888 7999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 82 ~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 150 (318)
T cd05570 82 DLMFHIQRS------GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-- 150 (318)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--
Confidence 999998754 358999999999999999999999 899999999999999999999999999986422111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 151 ---------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-----~~~ 204 (318)
T cd05570 151 ---------------------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-----DEL 204 (318)
T ss_pred ---------------------CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-----HHH
Confidence 011223567889999999999999999999999999999999999954321 122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM-----RHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~~~ 664 (686)
...+.......+. .....+.+++.+||+.||++||++ .+++++
T Consensus 205 ~~~i~~~~~~~~~-------------~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 205 FQSILEDEVRYPR-------------WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHcCCCCCCC-------------cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 2223222211111 112357799999999999999999 888765
No 69
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.5e-39 Score=337.17 Aligned_cols=237 Identities=24% Similarity=0.355 Sum_probs=190.3
Q ss_pred ccCccCceEEEEEEe----CCCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 374 LLGKSTIGIVYKVAL----NNEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
.||+|+||.||++.. .+++.||+|++.... ......+..|++++++++||||+++++++...+..++||||+++
T Consensus 3 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 82 (318)
T cd05582 3 VLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRG 82 (318)
T ss_pred eeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCC
Confidence 589999999999875 357899999986532 12335677899999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 83 GDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 9999999654 358999999999999999999999 8999999999999999999999999999875432110
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......||..|+|||.+.+..++.++|||||||++|||++|+.||..... ..
T Consensus 154 -----------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~ 205 (318)
T cd05582 154 -----------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KE 205 (318)
T ss_pred -----------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HH
Confidence 11234577889999999888899999999999999999999999954322 12
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRH 660 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 660 (686)
....+......++.. ....+.+++.+||+.||++||++.+
T Consensus 206 ~~~~i~~~~~~~p~~-------------~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 206 TMTMILKAKLGMPQF-------------LSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHcCCCCCCCC-------------CCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 222333222222111 1235678999999999999999555
No 70
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.9e-38 Score=325.47 Aligned_cols=248 Identities=22% Similarity=0.264 Sum_probs=192.8
Q ss_pred cCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
||+|+||+||++... +++.||+|.+..... ...+.+..|++++++++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 678999999865322 2335678899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++...... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--- 152 (280)
T cd05608 81 RYHIYNVDEE--NPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--- 152 (280)
T ss_pred HHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc---
Confidence 9888543211 1468999999999999999999999 8999999999999999999999999999875432211
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||....... .......
T Consensus 153 --------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~ 211 (280)
T cd05608 153 --------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQ 211 (280)
T ss_pred --------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHH
Confidence 1122356778999999999999999999999999999999999995433211 1111111
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
......... .......+.+++.+||+.||++|| ++++++++
T Consensus 212 ~~~~~~~~~-------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 212 RILNDSVTY-------------PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred hhcccCCCC-------------cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 111111000 011234577899999999999999 66777765
No 71
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-38 Score=334.71 Aligned_cols=246 Identities=19% Similarity=0.325 Sum_probs=193.6
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+||+|+||.||++... +++.||+|.++... ....+.+..|..++.++ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 5899999999999875 57899999987532 23345688999999998 7999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-- 150 (329)
T cd05588 82 DLMFHMQRQ------RKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-- 150 (329)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCC--
Confidence 999988654 358999999999999999999999 899999999999999999999999999986321110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc---chhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM---ELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~---~~~~ 605 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~ 209 (329)
T cd05588 151 ---------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNT 209 (329)
T ss_pred ---------------------CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccc
Confidence 0112345788899999999989999999999999999999999999532211 1112
Q ss_pred HHHHHHHH-hhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC------HHHHHHH
Q 042348 606 VQWIQLIL-EDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS------MRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~ev~~~ 664 (686)
..+..... ......+.. ....+.+++.+||+.||++||+ +.|++++
T Consensus 210 ~~~~~~~~~~~~~~~p~~-------------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 210 EDYLFQVILEKQIRIPRS-------------LSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred hHHHHHHHHcCCCCCCCC-------------CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 22222222 221111111 1235778999999999999997 6777765
No 72
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.2e-38 Score=330.95 Aligned_cols=259 Identities=20% Similarity=0.303 Sum_probs=191.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||||.+..... .....+.+|+.++++++||||+++++++.+.+..++||||++ ++|
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l 89 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDL 89 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCH
Confidence 36999999999999976 578999999875432 223467889999999999999999999999999999999995 688
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 90 ~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 157 (303)
T cd07869 90 CQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS---- 157 (303)
T ss_pred HHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC----
Confidence 88887543 358899999999999999999999 899999999999999999999999999987432111
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......+|..|+|||++.+ ..++.++|||||||++|||++|+.||.........+ ..+
T Consensus 158 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~~~ 217 (303)
T cd07869 158 -------------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQL-ERI 217 (303)
T ss_pred -------------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHH-HHH
Confidence 01122456778999998865 458899999999999999999999996543221111 111
Q ss_pred HHHHhhcC--Cccc-----ccCcccccC---------CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRK--PMTD-----ILDPFLAHD---------LDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~--~~~~-----~~d~~l~~~---------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ .... ..++..... .........+.+++.+||+.||++|||+.|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 218 FLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred HHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 11111000 0000 000000000 0000012356789999999999999999999864
No 73
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-38 Score=347.98 Aligned_cols=250 Identities=21% Similarity=0.280 Sum_probs=197.7
Q ss_pred hcccCccCceEEEEEEeC-C-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 372 AFLLGKSTIGIVYKVALN-N-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
...||+|+||.||+|... + +..||+|.+..........+.+|+.+++.++|||||++++++...+..++||||+++|+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~ 151 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGD 151 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCC
Confidence 357999999999999754 3 56788888765554445678889999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.++++..... ..++++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 152 L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~- 225 (478)
T PTZ00267 152 LNKQIKQRLKE--HLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL- 225 (478)
T ss_pred HHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc-
Confidence 99988653211 1468899999999999999999999 89999999999999999999999999999865321100
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... .+.+
T Consensus 226 --------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~ 280 (478)
T PTZ00267 226 --------------------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIM 280 (478)
T ss_pred --------------------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHH
Confidence 112234678889999999988999999999999999999999999954321 2223
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+..+... +. . ......+.+++.+||+.||++||++.+++.+
T Consensus 281 ~~~~~~~~~------~~-~-----~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 281 QQVLYGKYD------PF-P-----CPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHhCCCC------CC-C-----ccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 333332211 00 0 0122357889999999999999999998754
No 74
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-39 Score=315.18 Aligned_cols=261 Identities=23% Similarity=0.348 Sum_probs=199.5
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCC--CCccchHHHHHHHHHHhccCCCCcceeeEEEEe-----cCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGN--GGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS-----VDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-----~~~~~lV~e~~ 445 (686)
.||+|+||.|.++... +|+.||||++.. ......++..+|+++|+.++|+||+.+.+.+.. -+..|+|+|+|
T Consensus 29 ~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM 108 (359)
T KOG0660|consen 29 PIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM 108 (359)
T ss_pred cccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH
Confidence 5999999999999865 689999999973 455566888999999999999999999999875 35679999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
+-||...++.. +.|+...+..++.|+++||.|+|+ .+|+|||+||+|+|++.+...||+|||+|+.....
T Consensus 109 -etDL~~iik~~------~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 109 -ETDLHQIIKSQ------QDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred -hhHHHHHHHcC------ccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccceeecccc
Confidence 56999999875 359999999999999999999999 89999999999999999999999999999976532
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCccccc-CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.. ....+..+.|.+|+|||.+. ...|+.+.||||.|||+.||++|+.-|.+. +..+
T Consensus 179 ~~---------------------~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~--d~v~ 235 (359)
T KOG0660|consen 179 FE---------------------DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK--DYVH 235 (359)
T ss_pred Cc---------------------ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC--chHH
Confidence 10 12345678899999999874 478999999999999999999999988432 2222
Q ss_pred HHHHHHHHHhhcCC-----------------cccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--H
Q 042348 605 IVQWIQLILEDRKP-----------------MTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS--L 665 (686)
Q Consensus 605 ~~~~~~~~~~~~~~-----------------~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L 665 (686)
....+...+....+ ++..-...+...+ +......++++.+||..||.+|+|++|.+++ |
T Consensus 236 Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~f--p~a~p~AidLlekmL~fdP~kRita~eAL~hPYl 313 (359)
T KOG0660|consen 236 QLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIF--PNANPLAIDLLEKMLVFDPKKRITAEEALAHPYL 313 (359)
T ss_pred HHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHc--CCCCHHHHHHHHHHhccCccccCCHHHHhcChhh
Confidence 22222221111000 0000000000000 1122357899999999999999999999987 4
Q ss_pred hccc
Q 042348 666 DRVN 669 (686)
Q Consensus 666 ~~i~ 669 (686)
....
T Consensus 314 ~~~h 317 (359)
T KOG0660|consen 314 APYH 317 (359)
T ss_pred hhhc
Confidence 4444
No 75
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.4e-38 Score=332.12 Aligned_cols=241 Identities=21% Similarity=0.298 Sum_probs=190.4
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||+|.++... ......+..|..++... +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 5899999999999876 57899999986532 22345567788888765 8999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~L~~~i~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 150 (316)
T cd05620 82 DLMFHIQDK------GRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-- 150 (316)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--
Confidence 999998764 358899999999999999999999 899999999999999999999999999986322111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-----~~~ 204 (316)
T cd05620 151 ---------------------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-----DEL 204 (316)
T ss_pred ---------------------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHH
Confidence 011234578889999999998999999999999999999999999954322 122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH-HHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR-HVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ev~~~ 664 (686)
...+.......+.. ...++.+++.+||+.||++||++. ++.++
T Consensus 205 ~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 205 FESIRVDTPHYPRW-------------ITKESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred HHHHHhCCCCCCCC-------------CCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 22222221111111 123567899999999999999985 56533
No 76
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5.5e-38 Score=317.66 Aligned_cols=246 Identities=24% Similarity=0.401 Sum_probs=197.0
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|...++..+|+|.+..... ..+++.+|+.++++++||||+++++++...+..++||||+++|+|.+
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~ 88 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLN 88 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHH
Confidence 35999999999999988777899999875433 34679999999999999999999999998889999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.... ..+++..++.++.|++.||+|||+ ++++|+||||+||++++++.+||+|||.++.......
T Consensus 89 ~i~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~----- 155 (256)
T cd05113 89 YLREHG-----KRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY----- 155 (256)
T ss_pred HHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCce-----
Confidence 997643 358999999999999999999999 8999999999999999999999999999875432110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......++..|+|||+..+..++.++|||||||++|||++ |+.||...... .....
T Consensus 156 -----------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~ 213 (256)
T cd05113 156 -----------------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-----ETVEK 213 (256)
T ss_pred -----------------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHH
Confidence 00112234567999999988889999999999999999999 99998543321 11222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
+....... .+ ......+.+++.+||+.+|++||++.+|++.|+
T Consensus 214 ~~~~~~~~----~~--------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 214 VSQGLRLY----RP--------HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HhcCCCCC----CC--------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 22221110 00 012346789999999999999999999998874
No 77
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.5e-38 Score=320.11 Aligned_cols=249 Identities=27% Similarity=0.451 Sum_probs=199.5
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||+++|+|.+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLD 90 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHH
Confidence 46999999999999988888899999865432 35788999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
+++...+ ..+++..++.++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++........
T Consensus 91 ~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~---- 159 (261)
T cd05072 91 FLKSDEG----GKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT---- 159 (261)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCcee----
Confidence 9976532 458899999999999999999999 89999999999999999999999999999765321110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||+.....++.++|||||||++|||+| |+.||...... .. ...
T Consensus 160 ------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~---~~~ 216 (261)
T cd05072 160 ------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DV---MSA 216 (261)
T ss_pred ------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HH---HHH
Confidence 0112234567999999988889999999999999999999 99999543221 11 111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.... ..... . .....++.+++.+|++.+|++||+++++.+.|+++
T Consensus 217 ~~~~-~~~~~-----~------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 217 LQRG-YRMPR-----M------ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHcC-CCCCC-----C------CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 1111 11110 0 01224578899999999999999999999999864
No 78
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.1e-38 Score=323.09 Aligned_cols=255 Identities=26% Similarity=0.413 Sum_probs=200.5
Q ss_pred hcccCccCceEEEEEEeCC------CceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 372 AFLLGKSTIGIVYKVALNN------EEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
.+.||+|+||.||+|...+ +..||||.+...... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 89 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEY 89 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEec
Confidence 3469999999999998643 478999998765443 356899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCC--------ccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeec
Q 042348 445 IPNGSLATAIHGKAG--------IISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDF 516 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~--------~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 516 (686)
+++++|.+++..... ......+++.++..++.|++.||+|||+ ++++||||||+||+++.++.+||+||
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~kl~d~ 166 (280)
T cd05049 90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVVKIGDF 166 (280)
T ss_pred CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeEEECCc
Confidence 999999999976532 1112458899999999999999999999 89999999999999999999999999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCc
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPM 595 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~ 595 (686)
|+++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 167 g~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~ 225 (280)
T cd05049 167 GMSRDVYTTDYY---------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPW 225 (280)
T ss_pred ccceecccCcce---------------------ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCC
Confidence 998754321100 00112234567999999999999999999999999999999 99998
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
...... +.+..+..+... . .. ......+.+++.+||+.||++||++.||++.|++
T Consensus 226 ~~~~~~-----~~~~~~~~~~~~--~-~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 226 YGLSNE-----EVIECITQGRLL--Q-RP---------RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CCCCHH-----HHHHHHHcCCcC--C-CC---------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 543322 122222222111 0 00 1123467899999999999999999999998864
No 79
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-39 Score=298.70 Aligned_cols=266 Identities=24% Similarity=0.324 Sum_probs=204.3
Q ss_pred cccCccCceEEEEEE-eCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecC-----ceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD-----EKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lV~e~~~ 446 (686)
+.+|+|||+-||.++ ..++..+|+|++......+.+..++|++.-++++||||++++++..... +.|++++|..
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~ 106 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYK 106 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhc
Confidence 369999999999998 5568899999998877777888999999999999999999999876543 4799999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
.|+|.+.+....... ..+++.+++.|+.+|++||++||+..+ +++||||||.|||+.+++.+++.|||.+.......
T Consensus 107 ~Gsl~d~i~~~k~kg--~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i 183 (302)
T KOG2345|consen 107 RGSLLDEIERLKIKG--NFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQI 183 (302)
T ss_pred cccHHHHHHHHhhcC--CccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccCccccceEe
Confidence 999999998654221 468999999999999999999999553 59999999999999999999999999987654322
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.... ...+.........|..|+|||.+. +...++++|||||||++|+|+.|..||......+.
T Consensus 184 ~~~~--------------~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg 249 (302)
T KOG2345|consen 184 EGSR--------------QALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG 249 (302)
T ss_pred echH--------------HHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC
Confidence 1110 001112233445678899999874 34578999999999999999999999944322221
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
.+ ...+..+.+.-. ......+.+.+++..|++.||.+||++.+++.+++.+.
T Consensus 250 Sl-------------aLAv~n~q~s~P-~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 250 SL-------------ALAVQNAQISIP-NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eE-------------EEeeeccccccC-CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11 111111111100 11114457889999999999999999999999988753
No 80
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-39 Score=328.71 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=208.5
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.+.||+|.||+|..+....+..||||.++..... .+++|.+|+++|.+++|||||+++|+|..++.+++|+|||++|+|
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDL 622 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDL 622 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcH
Confidence 4579999999999999998899999999876443 458899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.++... .+.-....+|+.|||.|++||.+ -++|||||.++|+|+|.++++||+|||+++-+-.++..
T Consensus 623 nqFl~aheap----t~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy-- 693 (807)
T KOG1094|consen 623 NQFLSAHELP----TAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY-- 693 (807)
T ss_pred HHHHHhccCc----ccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCce--
Confidence 9999877431 23445567899999999999999 78999999999999999999999999999865433221
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh--CCCCccccCccchhHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS--GKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt--G~~P~~~~~~~~~~~~~~ 608 (686)
......+-...|||||.+.-+++++++|||+|||++||+++ ...||.+..++ +.++-
T Consensus 694 -------------------~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven 752 (807)
T KOG1094|consen 694 -------------------RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVEN 752 (807)
T ss_pred -------------------eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHh
Confidence 11112233567999999999999999999999999999887 78899655432 23333
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
......+..+..-.. .+..+..++++++.+||..+-++||+++++...|++.
T Consensus 753 ~~~~~~~~~~~~~l~--------~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 753 AGEFFRDQGRQVVLS--------RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhhhcCCCCcceecc--------CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 333333332211111 1234566889999999999999999999999998764
No 81
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.9e-38 Score=322.57 Aligned_cols=249 Identities=24% Similarity=0.291 Sum_probs=193.7
Q ss_pred cCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
||+|+||.||++... +++.||+|.+..... .....+..|++++++++||||+++++++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 588999999864321 2234566799999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---- 149 (277)
T cd05607 81 KYHIYNVGE----RGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---- 149 (277)
T ss_pred HHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc----
Confidence 998865432 458899999999999999999999 899999999999999999999999999987543211
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ........
T Consensus 150 --------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~ 208 (277)
T cd05607 150 --------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKR 208 (277)
T ss_pred --------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHH
Confidence 011234677899999998888999999999999999999999999543221 11112222
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
.......... ......++.+++.+||+.||++||+++|+++.+..
T Consensus 209 ~~~~~~~~~~------------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~ 253 (277)
T cd05607 209 RTLEDEVKFE------------HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRK 253 (277)
T ss_pred Hhhccccccc------------cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhc
Confidence 2221111100 00122357899999999999999999877655544
No 82
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.5e-38 Score=331.52 Aligned_cols=241 Identities=23% Similarity=0.332 Sum_probs=189.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHH---hccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAI---GKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||||.++... ....+.+.+|++++ ++++||||+++++++...+..++||||+
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~ 84 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYA 84 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCC
Confidence 46999999999999865 58899999986532 22335566676655 5678999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++|+|..+++. ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.....
T Consensus 85 ~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 85 AGGDLMMHIHT-------DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred CCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 99999998864 358999999999999999999999 89999999999999999999999999998642211
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
. .......|+..|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 155 ~-----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~----- 206 (324)
T cd05589 155 G-----------------------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE----- 206 (324)
T ss_pred C-----------------------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-----
Confidence 1 011234577889999999988999999999999999999999999954322
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
.+....+.......+.. ....+.+++.+||+.||++|| ++.+++++
T Consensus 207 ~~~~~~i~~~~~~~p~~-------------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 207 EEVFDSIVNDEVRYPRF-------------LSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred HHHHHHHHhCCCCCCCC-------------CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 12223333322221111 123567899999999999999 46666654
No 83
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.4e-38 Score=327.83 Aligned_cols=259 Identities=19% Similarity=0.273 Sum_probs=193.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||++++.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 86 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNM 86 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCH
Confidence 46999999999999986 57889999986542 2234668899999999999999999999999999999999999877
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
+..+.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 87 l~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 155 (287)
T cd07848 87 LELLEEMP------NGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-- 155 (287)
T ss_pred HHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc--
Confidence 76654332 358999999999999999999999 8999999999999999999999999999976532111
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+
T Consensus 156 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~--~~~~~ 213 (287)
T cd07848 156 --------------------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID--QLFTI 213 (287)
T ss_pred --------------------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH--HHHHH
Confidence 01122456778999999988889999999999999999999999996533211 11111
Q ss_pred HHHHh-----------hcCCcccccCcccccCCC-----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILE-----------DRKPMTDILDPFLAHDLD-----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~-----------~~~~~~~~~d~~l~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... ..........+....... .......+.+++.+||+.||++|||++|++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 214 QKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred HHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11100 000000000000000000 00123458899999999999999999999864
No 84
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5e-38 Score=322.96 Aligned_cols=255 Identities=28% Similarity=0.441 Sum_probs=199.2
Q ss_pred cccCccCceEEEEEEeCC------CceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALNN------EEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|.... ...||+|.+..... ....+|.+|++++++++||||+++++++...+..+++|||+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~ 90 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYL 90 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecC
Confidence 369999999999998643 25799999875432 33456899999999999999999999999989999999999
Q ss_pred CCCCHHHHhhcCCCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEee
Q 042348 446 PNGSLATAIHGKAGII----------SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISD 515 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 515 (686)
++|+|.+++....... ....+++.++..++.|++.||+|||+ ++++||||||+||++++++.+||+|
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~L~d 167 (283)
T cd05048 91 AHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLTVKISD 167 (283)
T ss_pred CCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCcEEECC
Confidence 9999999997642211 11458899999999999999999999 8999999999999999999999999
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCC
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLP 594 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P 594 (686)
||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..|
T Consensus 168 fg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p 226 (283)
T cd05048 168 FGLSRDIYSADYY---------------------RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP 226 (283)
T ss_pred Ccceeeccccccc---------------------cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCC
Confidence 9999754321110 01112334667999999988889999999999999999998 9999
Q ss_pred ccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
|...... ++ ...+.... . ... ......++.+++.+||+.||++||+++||+++|+++
T Consensus 227 ~~~~~~~--~~---~~~i~~~~-~-~~~----------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 227 YYGFSNQ--EV---IEMIRSRQ-L-LPC----------PEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred CCCCCHH--HH---HHHHHcCC-c-CCC----------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 9643322 11 22222211 1 110 112345788999999999999999999999999863
No 85
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.7e-38 Score=332.61 Aligned_cols=236 Identities=22% Similarity=0.343 Sum_probs=186.9
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHH-HHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAE-AIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||+|.+.... .....++..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 5899999999999875 58899999986532 122344555555 567899999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 150 (323)
T cd05575 82 ELFFHLQRE------RSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-- 150 (323)
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--
Confidence 999998754 358899999999999999999999 899999999999999999999999999986432111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||.... ..+.
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~ 204 (323)
T cd05575 151 ---------------------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEM 204 (323)
T ss_pred ---------------------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHH
Confidence 01123457888999999999899999999999999999999999995432 2222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 659 (686)
...+........ + . ....+.+++.+||+.||++||++.
T Consensus 205 ~~~i~~~~~~~~----~----~-----~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 205 YDNILNKPLRLK----P----N-----ISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHcCCCCCC----C----C-----CCHHHHHHHHHHhhcCHHhCCCCC
Confidence 333333221111 1 1 123577899999999999999985
No 86
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.6e-38 Score=317.59 Aligned_cols=250 Identities=27% Similarity=0.435 Sum_probs=203.5
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
.+.||+|+||.||+|...++..+++|.+.........++.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLL 90 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHH
Confidence 34699999999999998889999999998766555678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++....+ ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||.+........
T Consensus 91 ~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~---- 159 (261)
T cd05148 91 AFLRSPEG----QVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY---- 159 (261)
T ss_pred HHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCccc----
Confidence 99986543 458999999999999999999999 8999999999999999999999999999976532110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
......++..|+|||......++.++||||||+++|+|++ |+.||..... . +.+.
T Consensus 160 -------------------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--~---~~~~ 215 (261)
T cd05148 160 -------------------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--H---EVYD 215 (261)
T ss_pred -------------------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--H---HHHH
Confidence 0112234567999999988889999999999999999998 8999954321 1 1122
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
........ . . .......+.+++.+||+.||++|||+.++++.|+.+
T Consensus 216 ~~~~~~~~-~---~--------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 216 QITAGYRM-P---C--------PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHhCCcC-C---C--------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 22211110 0 0 012234678999999999999999999999999864
No 87
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.2e-38 Score=322.20 Aligned_cols=257 Identities=25% Similarity=0.390 Sum_probs=201.9
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+.||+|+||.||++... ++..+|+|.+........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 90 (288)
T cd05093 11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK 90 (288)
T ss_pred cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence 46999999999999742 345689999877655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCc-------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcc
Q 042348 447 NGSLATAIHGKAGI-------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA 519 (686)
Q Consensus 447 ~gsL~~~l~~~~~~-------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 519 (686)
+++|.+++...... .....+++..++.++.|++.||+|||+ ++++||||||+||++++++.+||+|||++
T Consensus 91 ~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~ 167 (288)
T cd05093 91 HGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMS 167 (288)
T ss_pred CCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEeccCCcc
Confidence 99999999754310 111358999999999999999999999 89999999999999999999999999998
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcccc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQI 598 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~ 598 (686)
+........ .......++..|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 168 ~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~ 226 (288)
T cd05093 168 RDVYSTDYY---------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 226 (288)
T ss_pred ccccCCcee---------------------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 754321100 01112234567999999988889999999999999999999 89998543
Q ss_pred CccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 599 GSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
... .....+..+... .. .. ....++.+++.+||+.||.+|||+.|+.+.|+++..
T Consensus 227 ~~~-----~~~~~i~~~~~~--~~-----~~-----~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 227 SNN-----EVIECITQGRVL--QR-----PR-----TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred CHH-----HHHHHHHcCCcC--CC-----CC-----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 321 112222222111 00 00 122358899999999999999999999999998864
No 88
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=9.8e-38 Score=317.18 Aligned_cols=249 Identities=25% Similarity=0.381 Sum_probs=198.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
+.||+|+||.||+|... .+..||+|.+.... ....++.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 90 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHH
Confidence 46999999999999865 47889999987543 34567899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++..... ..+++..++.++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++.......
T Consensus 91 ~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~---- 159 (263)
T cd05052 91 DYLRECNR----QEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY---- 159 (263)
T ss_pred HHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCcccccccccee----
Confidence 99976432 458999999999999999999999 8999999999999999999999999999975532110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
........+..|+|||.+.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 160 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~ 216 (263)
T cd05052 160 ------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYE 216 (263)
T ss_pred ------------------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Confidence 00011223456999999988899999999999999999998 9999854321 12222
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
..... ... + . ......++.+++.+||+.+|++||++.|+++.|+.+
T Consensus 217 ~~~~~-~~~-~-----~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 217 LLEKG-YRM-E-----R-----PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHCC-CCC-C-----C-----CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 22211 110 0 0 011234688999999999999999999999999875
No 89
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.2e-38 Score=317.40 Aligned_cols=249 Identities=29% Similarity=0.467 Sum_probs=199.7
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|++|.||+|...+++.||+|.++.... ..+++.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLE 90 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHH
Confidence 46999999999999988788899999876432 34679999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++....+ ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++........
T Consensus 91 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~---- 159 (261)
T cd05068 91 YLQGGAG----RALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE---- 159 (261)
T ss_pred HHhccCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc----
Confidence 9976542 468999999999999999999999 89999999999999999999999999999866421100
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......+..|+|||+..+..++.++||||||+++|||+| |+.||...... .....
T Consensus 160 ------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~ 216 (261)
T cd05068 160 ------------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-----EVLQQ 216 (261)
T ss_pred ------------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHH
Confidence 0011122346999999988889999999999999999999 99998543211 11112
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
+... .... . .......+.+++.+|++.+|++||++.++++.|+++
T Consensus 217 ~~~~-~~~~--~---------~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 217 VDQG-YRMP--C---------PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHcC-CCCC--C---------CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 2111 1110 0 011234688999999999999999999999999863
No 90
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.7e-38 Score=334.25 Aligned_cols=242 Identities=23% Similarity=0.341 Sum_probs=188.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||+|+||.||+|... +++.||||.+..... ...+.+.+|++++++++|+||+++++++...+..++||||+++|+|
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 159 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSL 159 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcc
Confidence 46999999999999865 588999999865432 2346789999999999999999999999999999999999999998
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+. ...++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.......
T Consensus 160 ~~~----------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--- 223 (353)
T PLN00034 160 EGT----------HIADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--- 223 (353)
T ss_pred ccc----------ccCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceecccccc---
Confidence 653 235677888999999999999999 8999999999999999999999999999986532110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
......||..|+|||++.. ...+.++|||||||++|||++|+.||...... +.
T Consensus 224 --------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~ 281 (353)
T PLN00034 224 --------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DW 281 (353)
T ss_pred --------------------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cH
Confidence 1123457888999998743 23456899999999999999999999632211 11
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
............+ . . ......++.+++.+||+.||++||++.|++++
T Consensus 282 ~~~~~~~~~~~~~--~-~---------~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 282 ASLMCAICMSQPP--E-A---------PATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHHHHhccCCC--C-C---------CCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111111110 0 0 01123467899999999999999999999987
No 91
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.1e-38 Score=328.87 Aligned_cols=253 Identities=26% Similarity=0.375 Sum_probs=197.4
Q ss_pred cccCccCceEEEEEEeC-CCc----eEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEE----AVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|.+. ++. .||+|.+.... ....+++.+|+.+++.++||||+++++++... ..++|+||++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~ 91 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP 91 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCC
Confidence 46999999999999864 333 48999987543 23456789999999999999999999999764 5789999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..++.++.||+.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 92 ~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 92 FGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred CCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence 999999998654 358899999999999999999999 899999999999999999999999999998664322
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. .......++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 164 ~~---------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---- 218 (316)
T cd05108 164 KE---------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---- 218 (316)
T ss_pred cc---------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 10 00111223567999999998899999999999999999998 99998543221
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIST 672 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 672 (686)
+. ..........+. + ..+...+.+++.+||+.+|++||++.+++..+..+....
T Consensus 219 -~~-~~~~~~~~~~~~---~--------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 219 -EI-SSILEKGERLPQ---P--------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred -HH-HHHHhCCCCCCC---C--------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 11 122222111110 0 112235778999999999999999999999998876443
No 92
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-39 Score=329.36 Aligned_cols=239 Identities=25% Similarity=0.448 Sum_probs=199.0
Q ss_pred cCccCceEEEEEEeC-CCceEEEEEcCCCCccc---hHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQR---FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
||.|+||.||.++.. +.+.||||++.....+. ..++.+|++.|.+++|||+|.+.|+|......++|||||- ||-
T Consensus 34 IGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-GSA 112 (948)
T KOG0577|consen 34 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSA 112 (948)
T ss_pred hcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-ccH
Confidence 999999999999864 57889999997654433 4578899999999999999999999999999999999994 588
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.|++.-.. +++.+.++..|..+.+.||+|||+ .+.||||||+.|||+.+.|.+||+|||.|.+..+
T Consensus 113 sDlleVhk-----KplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P------ 178 (948)
T KOG0577|consen 113 SDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP------ 178 (948)
T ss_pred HHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCc------
Confidence 88886554 679999999999999999999999 8999999999999999999999999999976543
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.++.+||++|||||++. .+.|+-|+||||+|++..||.-.++|+..++.+ .
T Consensus 179 ---------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-----S 232 (948)
T KOG0577|consen 179 ---------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----S 232 (948)
T ss_pred ---------------------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-----H
Confidence 24678899999999874 478999999999999999999999998654432 2
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
....+..+..|. + ...+....+..++..||++-|.+|||..+++.+-
T Consensus 233 ALYHIAQNesPt-------L----qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 233 ALYHIAQNESPT-------L----QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred HHHHHHhcCCCC-------C----CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 233333333322 1 1234455688889999999999999999988764
No 93
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.1e-38 Score=322.38 Aligned_cols=258 Identities=26% Similarity=0.418 Sum_probs=203.2
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|... ++..+++|.+........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 90 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMK 90 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCC
Confidence 36999999999999743 345689999877665556789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeec
Q 042348 447 NGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDF 516 (686)
Q Consensus 447 ~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 516 (686)
+++|.+++...... .....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.++|+||
T Consensus 91 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df 167 (291)
T cd05094 91 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDF 167 (291)
T ss_pred CCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEECCC
Confidence 99999999764310 111348999999999999999999999 89999999999999999999999999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCc
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPM 595 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~ 595 (686)
|+++....... ........++..|+|||++.+..++.++|||||||++|||+| |+.||
T Consensus 168 g~a~~~~~~~~---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 226 (291)
T cd05094 168 GMSRDVYSTDY---------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW 226 (291)
T ss_pred CcccccCCCce---------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99975432110 001122345677999999988889999999999999999999 99998
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
...... ..+........ ... .......+.+++.+||+.+|++||++.+|++.|+++...
T Consensus 227 ~~~~~~-----~~~~~~~~~~~--~~~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 227 FQLSNT-----EVIECITQGRV--LER----------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCHH-----HHHHHHhCCCC--CCC----------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 543221 11222222111 110 011234678999999999999999999999999998643
No 94
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.2e-38 Score=332.10 Aligned_cols=247 Identities=21% Similarity=0.288 Sum_probs=192.5
Q ss_pred cccCccCceEEEEEEe----CCCceEEEEEcCCC----CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 373 FLLGKSTIGIVYKVAL----NNEEAVAVRRLGNG----GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
..||+|+||.||+++. .+++.||+|.+... .....+.+..|+.++.++ +||||+++++++...+..++|||
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILD 85 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEe
Confidence 4699999999999875 35788999998642 122345678899999999 59999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++|+|.+++... ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 86 ~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 86 YVSGGEMFTHLYQR------DNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred CCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 99999999999764 358999999999999999999999 899999999999999999999999999987543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.... .......||..|+|||++.+. .++.++|||||||++|||+||+.||.......
T Consensus 157 ~~~~----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 214 (332)
T cd05614 157 SEEK----------------------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN 214 (332)
T ss_pred ccCC----------------------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC
Confidence 2111 011234578889999998765 47899999999999999999999995433221
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
. .......+.....+.... ....+.+++.+||+.||++|| ++++++++
T Consensus 215 ~-~~~~~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 215 T-QSEVSRRILKCDPPFPSF-------------IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred C-HHHHHHHHhcCCCCCCCC-------------CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1 112222222222111111 123567899999999999999 67788765
No 95
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4e-38 Score=309.59 Aligned_cols=265 Identities=21% Similarity=0.280 Sum_probs=199.6
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCC-cceeeEEEEecC------ceeEEEe
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPN-IVSLRAYFWSVD------EKLLIYD 443 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~------~~~lV~e 443 (686)
.||+|+||+||+|+.. +|+.||+|++..... .......+|+.++++++|+| ||++++++...+ ..++|+|
T Consensus 18 klGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe 97 (323)
T KOG0594|consen 18 KLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFE 97 (323)
T ss_pred HhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEE
Confidence 4999999999999865 688999999876433 23356789999999999999 999999999877 6789999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|++. +|..++....... ..++...++.++.|++.||+|||+ ++|+||||||+||||+++|.+||+|||+|+...
T Consensus 98 ~~d~-DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 98 FLDR-DLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLARAFS 171 (323)
T ss_pred eecc-cHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence 9954 9999998765211 246778899999999999999999 999999999999999999999999999998543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
... ...+..++|.+|+|||++.+. .|++..||||+||++.||++++.-|.+...
T Consensus 172 ip~-----------------------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-- 226 (323)
T KOG0594|consen 172 IPM-----------------------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-- 226 (323)
T ss_pred CCc-----------------------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH--
Confidence 211 123456778899999999886 699999999999999999999988854432
Q ss_pred hhHHHHHHHHHhhc--CCccccc---Ccc--cccCCCc----H---HHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hh
Q 042348 603 LNIVQWIQLILEDR--KPMTDIL---DPF--LAHDLDK----E---DEIVSVLKIALDCVHKSPDKRPSMRHVCDS--LD 666 (686)
Q Consensus 603 ~~~~~~~~~~~~~~--~~~~~~~---d~~--l~~~~~~----~---~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~ 666 (686)
.+....+-..+... ..++... +-. ....... . .......+++.+|++++|.+|.|++.++++ +.
T Consensus 227 ~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~ 306 (323)
T KOG0594|consen 227 IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFS 306 (323)
T ss_pred HHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhc
Confidence 22222222222211 1111111 100 0000000 0 011357899999999999999999999988 55
Q ss_pred ccc
Q 042348 667 RVN 669 (686)
Q Consensus 667 ~i~ 669 (686)
.+.
T Consensus 307 ~~~ 309 (323)
T KOG0594|consen 307 ELP 309 (323)
T ss_pred ccc
Confidence 543
No 96
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.2e-38 Score=329.54 Aligned_cols=192 Identities=24% Similarity=0.327 Sum_probs=165.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||++... ++..+|+|.+... .......+.+|++++++++||||++++++|...+..++||||+++|+|
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 90 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 90 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcH
Confidence 46999999999999876 5788999988654 223346789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++..+..++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||++.......
T Consensus 91 ~~~l~~~------~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---- 158 (333)
T cd06650 91 DQVLKKA------GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---- 158 (333)
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc----
Confidence 9999754 3588899999999999999999972 369999999999999999999999999987543211
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ---------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 159 ---------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ---------------------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 1123567789999999988899999999999999999999999954
No 97
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=4.9e-38 Score=336.28 Aligned_cols=258 Identities=26% Similarity=0.316 Sum_probs=198.4
Q ss_pred hcccCccCceEEEEEEeCC------CceEEEEEcCCCC-ccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVALNN------EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e 443 (686)
...||+|+||.||+|.... +..||||++.... ....+.+.+|+++++++. |||||++++++...+..++|||
T Consensus 42 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 121 (400)
T cd05105 42 GRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITE 121 (400)
T ss_pred hheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEE
Confidence 3579999999999997531 3469999996542 233467899999999996 9999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCc---------------------------------------------------------------
Q 042348 444 YIPNGSLATAIHGKAGI--------------------------------------------------------------- 460 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~--------------------------------------------------------------- 460 (686)
||++|+|.++++.....
T Consensus 122 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (400)
T cd05105 122 YCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYS 201 (400)
T ss_pred ecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhh
Confidence 99999999998753210
Q ss_pred ---------------------------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEE
Q 042348 461 ---------------------------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHI 513 (686)
Q Consensus 461 ---------------------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 513 (686)
.....+++.++..++.|++.||+|||+ ++|+||||||+||++++++.+||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~~~~~kL 278 (400)
T cd05105 202 DIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQGKIVKI 278 (400)
T ss_pred hcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeCCCEEEE
Confidence 001347889999999999999999999 89999999999999999999999
Q ss_pred eecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CC
Q 042348 514 SDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GK 592 (686)
Q Consensus 514 ~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~ 592 (686)
+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |.
T Consensus 279 ~DfGla~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~ 337 (400)
T cd05105 279 CDFGLARDIMHDSNY---------------------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGG 337 (400)
T ss_pred EeCCcceeccccccc---------------------cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCC
Confidence 999999755321110 01112345667999999988889999999999999999997 99
Q ss_pred CCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 593 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
.||........ +........... . .......+.+++.+||+.||++||++.+|.+.|+++.
T Consensus 338 ~P~~~~~~~~~-----~~~~~~~~~~~~--~---------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 338 TPYPGMIVDST-----FYNKIKSGYRMA--K---------PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred CCCcccchhHH-----HHHHHhcCCCCC--C---------CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 99854322111 111111111110 0 0112346789999999999999999999999998764
No 98
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-37 Score=317.40 Aligned_cols=251 Identities=28% Similarity=0.490 Sum_probs=199.0
Q ss_pred hcccCccCceEEEEEEeCC----CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALNN----EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
...||+|+||.||+|.... ...||||.+.... .....+|.+|+.++++++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 88 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYME 88 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCC
Confidence 3469999999999998742 4579999987543 2334678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+++|.+++.... ..+++.++.+++.|++.||+|||+ ++|+||||||+||++++++.++|+|||+++......
T Consensus 89 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 89 NGSLDKFLREND-----GKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred CCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 999999997654 358999999999999999999999 899999999999999999999999999998664111
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. .......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 161 ~~---------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---- 215 (266)
T cd05033 161 AT---------------------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---- 215 (266)
T ss_pred cc---------------------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH----
Confidence 10 00011223567999999988889999999999999999998 99998543221
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
+....+... ..... .......+.+++.+||+.+|++||++.||+++|+++
T Consensus 216 -~~~~~~~~~-~~~~~-----------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 216 -DVIKAVEDG-YRLPP-----------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -HHHHHHHcC-CCCCC-----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 112222211 11110 011234678999999999999999999999999875
No 99
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-39 Score=302.19 Aligned_cols=247 Identities=25% Similarity=0.401 Sum_probs=199.5
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCC-----cc---chHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEE
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-----WQ---RFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLI 441 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~---~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 441 (686)
++++|+|..++|.++..+ ++...|+|++.... .. -.+.-.+|+.+|+++ .||+|+++.++|+++...++|
T Consensus 22 keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlV 101 (411)
T KOG0599|consen 22 KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLV 101 (411)
T ss_pred HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhh
Confidence 457999999999887654 57888999875321 11 123456899999999 699999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
+|.|+.|.|.|++.+. ..+++.+..+|++|+.+|++|||. ++||||||||+|||+|++.++||+|||.|..
T Consensus 102 Fdl~prGELFDyLts~------VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 102 FDLMPRGELFDYLTSK------VTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred hhhcccchHHHHhhhh------eeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccceeec
Confidence 9999999999999876 468999999999999999999999 8999999999999999999999999999998
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC------CCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV------RKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
+..++ .....+||++|.|||.+.. ..|+..+|+||+||+||.|+.|.+||
T Consensus 173 l~~Ge------------------------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPF 228 (411)
T KOG0599|consen 173 LEPGE------------------------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPF 228 (411)
T ss_pred cCCch------------------------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCch
Confidence 77554 2345678889999998743 35888999999999999999999999
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
..... .-..+.+..++... -.| ...+......+++.+||+.||.+|.|++|++++=
T Consensus 229 wHRkQ-----mlMLR~ImeGkyqF---~sp------eWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 229 WHRKQ-----MLMLRMIMEGKYQF---RSP------EWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred hHHHH-----HHHHHHHHhccccc---CCc------chhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 54221 11233334443222 122 2233445678999999999999999999999873
No 100
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-40 Score=301.10 Aligned_cols=246 Identities=23% Similarity=0.327 Sum_probs=199.5
Q ss_pred hcccCccCceEEEEEEe-CCCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.+.||+|.|+.||++.. .+|+.+|+|.+... ...+.+++.+|+++-+.++|||||++.+.+.+....|+|+|+|.|+
T Consensus 16 ~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~ 95 (355)
T KOG0033|consen 16 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 95 (355)
T ss_pred HHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccch
Confidence 34799999999999864 46888888877543 3345678999999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec---CCCCeEEeecCcccccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIA 525 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~~~~~~ 525 (686)
+|..-|-.+ ..+++..+-.++.||+++|+|+|. ++|||||+||+|+++. ...-+||+|||+|..+..+
T Consensus 96 dl~~eIV~R------~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g 166 (355)
T KOG0033|consen 96 ELFEDIVAR------EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG 166 (355)
T ss_pred HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence 998777654 247888899999999999999999 9999999999999995 3346899999999876522
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
......+||++|||||++...+|+..+|||+.|||||-|+.|..||.+...
T Consensus 167 ------------------------~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~----- 217 (355)
T KOG0033|consen 167 ------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----- 217 (355)
T ss_pred ------------------------cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-----
Confidence 123457889999999999999999999999999999999999999965322
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+.+..+...++. |.+. ...++..+|+.+||..||.+|.|+.|.+++
T Consensus 218 ~rlye~I~~g~yd~~~---~~w~------~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 218 HRLYEQIKAGAYDYPS---PEWD------TVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred HHHHHHHhccccCCCC---cccC------cCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 2335555555433321 1111 123356789999999999999999988765
No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.6e-38 Score=335.68 Aligned_cols=254 Identities=21% Similarity=0.250 Sum_probs=189.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
+.||+|+||.||++... +++.||+|.... ..+.+|++++++++|||||++++++......++|||++. ++|.
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~ 170 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLY 170 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHH
Confidence 46999999999999865 578899997532 457899999999999999999999999999999999995 7898
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++... ..+++.+++.|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 171 ~~l~~~------~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~---- 237 (391)
T PHA03212 171 CYLAAK------RNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA---- 237 (391)
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc----
Confidence 888654 358899999999999999999999 8999999999999999999999999999974321110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch--hHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL--NIVQWI 609 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~--~~~~~~ 609 (686)
.......||..|+|||++.+..++.++|||||||++|||+||+.||........ +....+
T Consensus 238 ------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l 299 (391)
T PHA03212 238 ------------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQI 299 (391)
T ss_pred ------------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHH
Confidence 011234678889999999988999999999999999999999988743221110 000111
Q ss_pred HHHHhhcCCcccc--c-------------------CcccccCC-CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDI--L-------------------DPFLAHDL-DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~--~-------------------d~~l~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+.......+.. . .+...... .......++.+++.+||+.||++|||++|++++
T Consensus 300 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 300 KLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 1111100000000 0 00000000 001223468899999999999999999999864
No 102
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=315.45 Aligned_cols=265 Identities=24% Similarity=0.352 Sum_probs=206.7
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhc--cCCCCcceeeEEEEecC----ceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGK--IRHPNIVSLRAYFWSVD----EKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~lV~e~~~ 446 (686)
+.||+|.||+||+|.++ |+.||||++...++ +.+.+|.++.+. |+|+||+.+++.-..++ ..+||.+|-+
T Consensus 217 e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe 292 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHE 292 (513)
T ss_pred EEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeeccc
Confidence 57999999999999998 77899999976533 567778777765 49999999999876543 4689999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHc-----cCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE-----VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~-----~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
.|||+|+|... .++....++++..+|.||+|||. ...+.|.|||||+.|||+.+++.+.|+|+|+|-.
T Consensus 293 ~GSL~DyL~r~-------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 293 HGSLYDYLNRN-------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred CCcHHHHHhhc-------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 99999999864 58899999999999999999995 3345799999999999999999999999999976
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC------CCCcchHHHHHHHHHHHHhC----
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK------PTQKWDIYSYGVILLEMISG---- 591 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDVwSlGvvl~elltG---- 591 (686)
........ -...+..+||..|||||++...- --..+||||||.|+||+..+
T Consensus 366 h~~~t~~i-------------------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~g 426 (513)
T KOG2052|consen 366 HDSDTDTI-------------------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESG 426 (513)
T ss_pred ecccCCcc-------------------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcC
Confidence 54332111 12446789999999999986532 12469999999999999862
Q ss_pred ------CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 592 ------KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 592 ------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
+.||.+.-+.+..+.+..+.+. .+-+.|.+.......+.+..+.++|..||..||.-|-|+-.|-+.|
T Consensus 427 gi~eey~~Pyyd~Vp~DPs~eeMrkVVC------v~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl 500 (513)
T KOG2052|consen 427 GIVEEYQLPYYDVVPSDPSFEEMRKVVC------VQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTL 500 (513)
T ss_pred CEehhhcCCcccCCCCCCCHHHHhccee------ecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHH
Confidence 4577665554443333221111 1123344445555667889999999999999999999999999999
Q ss_pred hcccccch
Q 042348 666 DRVNISTE 673 (686)
Q Consensus 666 ~~i~~~~~ 673 (686)
.++....|
T Consensus 501 ~~l~~~~e 508 (513)
T KOG2052|consen 501 AKLSNSDE 508 (513)
T ss_pred HHHhcChh
Confidence 99876444
No 103
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.8e-37 Score=313.21 Aligned_cols=248 Identities=23% Similarity=0.361 Sum_probs=194.4
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 5899999999999875 68889999876532 233467899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--- 150 (252)
T cd05084 82 TFLRTEG-----PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA--- 150 (252)
T ss_pred HHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCccccccccc---
Confidence 9997543 358899999999999999999999 89999999999999999999999999998754321100
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
. .......+..|+|||.+.+..++.++|||||||++|||++ |..||....... ..
T Consensus 151 -----~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~------~~ 206 (252)
T cd05084 151 -----S-------------TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ------TR 206 (252)
T ss_pred -----c-------------cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH------HH
Confidence 0 0001122346999999988889999999999999999998 888885432211 11
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
.......+. . . .......+.+++.+||+.+|++|||+.||.+.|++
T Consensus 207 ~~~~~~~~~-~-~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 207 EAIEQGVRL-P-C---------PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred HHHHcCCCC-C-C---------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 111111110 0 0 01123468899999999999999999999998863
No 104
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=7.4e-38 Score=321.93 Aligned_cols=247 Identities=23% Similarity=0.251 Sum_probs=194.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|.+..... .....+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 85 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 85 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCC
Confidence 46999999999999865 588999999865322 22345778999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+++.......
T Consensus 86 ~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05605 86 DLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET- 157 (285)
T ss_pred cHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc-
Confidence 99998865432 458999999999999999999999 8999999999999999999999999999875432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||....... ..+.
T Consensus 158 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~--~~~~ 212 (285)
T cd05605 158 -----------------------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV--KREE 212 (285)
T ss_pred -----------------------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh--HHHH
Confidence 112356778999999988889999999999999999999999996432211 1111
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
+........ .... ......+.+++.+||+.||++|| ++.+++++
T Consensus 213 ~~~~~~~~~---~~~~---------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 213 VERRVKEDQ---EEYS---------EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHhhhcc---cccC---------cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 111111111 0000 11233577899999999999999 88888776
No 105
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=9.2e-38 Score=319.21 Aligned_cols=239 Identities=21% Similarity=0.334 Sum_probs=186.3
Q ss_pred ccCccCceEEEEEEeCC-------------------------CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCccee
Q 042348 374 LLGKSTIGIVYKVALNN-------------------------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSL 428 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 428 (686)
.||+|+||.||+|.... ...|++|.+..........|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 48999999999987421 13588998876544445678899999999999999999
Q ss_pred eEEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC
Q 042348 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN 508 (686)
Q Consensus 429 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~ 508 (686)
++++......++||||+++|+|..++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK-----GRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEecc
Confidence 999999999999999999999999997543 358899999999999999999999 899999999999999764
Q ss_pred C-------CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHH
Q 042348 509 M-------EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYS 580 (686)
Q Consensus 509 ~-------~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS 580 (686)
+ .+|++|||++...... ....++..|+|||.+.+ ..++.++||||
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~---------------------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR---------------------------EERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred CcccCccceeeecCCccccccccc---------------------------cccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 3 3799999987532211 11234566999998865 56899999999
Q ss_pred HHHHHHHHH-hCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 042348 581 YGVILLEMI-SGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659 (686)
Q Consensus 581 lGvvl~ell-tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 659 (686)
|||++||++ +|+.||......+ ... ........+.. ....+.+++.+||+.+|++|||+.
T Consensus 207 lG~~l~el~~~g~~p~~~~~~~~--~~~----~~~~~~~~~~~-------------~~~~~~~li~~cl~~~p~~Rps~~ 267 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERTPSE--KER----FYEKKHRLPEP-------------SCKELATLISQCLTYEPTQRPSFR 267 (274)
T ss_pred HHHHHHHHHhCCCCCccccChHH--HHH----HHHhccCCCCC-------------CChHHHHHHHHHcccChhhCcCHH
Confidence 999999995 6999985433221 111 11111111110 112577899999999999999999
Q ss_pred HHHHHHh
Q 042348 660 HVCDSLD 666 (686)
Q Consensus 660 ev~~~L~ 666 (686)
+|++.|.
T Consensus 268 ~il~~L~ 274 (274)
T cd05076 268 TILRDLT 274 (274)
T ss_pred HHHHhhC
Confidence 9998873
No 106
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.3e-38 Score=328.49 Aligned_cols=242 Identities=21% Similarity=0.321 Sum_probs=190.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCC-CCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRH-PNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... +++.||||.+... .....+.+..|++++..++| ++|+++++++...+..++||||+++
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 85 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 85 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 4678999998653 22344678889999999976 5688999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 86 g~L~~~~~~~------~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~- 155 (324)
T cd05587 86 GDLMYHIQQV------GKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG- 155 (324)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-
Confidence 9999998754 358899999999999999999999 899999999999999999999999999986422111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.......||..|+|||++.+..++.++|||||||++|||+||+.||..... ..
T Consensus 156 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~ 208 (324)
T cd05587 156 ----------------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-----DE 208 (324)
T ss_pred ----------------------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HH
Confidence 011234578889999999998999999999999999999999999954322 12
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM-----RHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~~~ 664 (686)
....+.......+.. ...++.+++.+||+.||++|++. .++.++
T Consensus 209 ~~~~i~~~~~~~~~~-------------~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 209 LFQSIMEHNVSYPKS-------------LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHHHHcCCCCCCCC-------------CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 223333222221111 12357789999999999999986 566554
No 107
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.3e-37 Score=313.21 Aligned_cols=248 Identities=24% Similarity=0.379 Sum_probs=193.8
Q ss_pred cCccCceEEEEEEeC---CCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 375 LGKSTIGIVYKVALN---NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
||+|+||.||+|.+. ++..||+|.+..... ...+.+.+|+.++++++||||+++++++. .+..++||||+++|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999764 345799999876532 23456899999999999999999999885 4578999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+++++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++.........
T Consensus 82 ~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~- 152 (257)
T cd05115 82 NKFLSGKK-----DEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY- 152 (257)
T ss_pred HHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccce-
Confidence 99997543 458999999999999999999999 899999999999999999999999999997553221100
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~ 609 (686)
.......++..|+|||.+....++.++|||||||++||+++ |+.||...... ...
T Consensus 153 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~ 208 (257)
T cd05115 153 -------------------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-----EVM 208 (257)
T ss_pred -------------------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-----HHH
Confidence 00011223456999999988889999999999999999996 99999543321 122
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
..+...... . .+ ..+..++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 209 ~~~~~~~~~--~-~~---------~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 209 SFIEQGKRL--D-CP---------AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHCCCCC--C-CC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 222222111 0 11 11234677899999999999999999999999875
No 108
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.3e-37 Score=317.97 Aligned_cols=255 Identities=20% Similarity=0.363 Sum_probs=197.4
Q ss_pred cccCccCceEEEEEEeCC----CceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCc------eeE
Q 042348 373 FLLGKSTIGIVYKVALNN----EEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE------KLL 440 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~l 440 (686)
+.||+|+||.||+|.... +..||+|+++.. .......+.+|++.++.++||||+++++++...+. .++
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 84 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMV 84 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEE
Confidence 469999999999998643 367999998753 23345678999999999999999999999876554 699
Q ss_pred EEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 441 IYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 441 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
||||+++|+|.+++...........+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++
T Consensus 85 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 85 ILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred EEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCcccee
Confidence 99999999999998654322222468999999999999999999999 899999999999999999999999999998
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccC
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIG 599 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~ 599 (686)
........ .......++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 162 ~~~~~~~~---------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~ 220 (273)
T cd05035 162 KIYSGDYY---------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE 220 (273)
T ss_pred eccccccc---------------------cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 65422110 00011223456999999988889999999999999999999 888985432
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.. +........... .. ......++.+++.+||+.||++||++.|+++.|+++
T Consensus 221 ~~-----~~~~~~~~~~~~--~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 221 NH-----EIYDYLRHGNRL--KQ----------PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HH-----HHHHHHHcCCCC--CC----------CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 21 122222222111 00 011334688999999999999999999999999875
No 109
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.5e-38 Score=329.74 Aligned_cols=241 Identities=23% Similarity=0.318 Sum_probs=187.2
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHH-HHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAE-AIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||+|.+.... ......+..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 5899999999999876 46789999986532 122234444444 567889999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-- 150 (325)
T cd05602 82 ELFYHLQRE------RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-- 150 (325)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--
Confidence 999999764 347888889999999999999999 899999999999999999999999999987432111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... .+.
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~ 204 (325)
T cd05602 151 ---------------------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEM 204 (325)
T ss_pred ---------------------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHH
Confidence 011234578889999999998999999999999999999999999954322 222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+....... .+ .....+.+++.+||+.||.+||++.+.+..
T Consensus 205 ~~~i~~~~~~~----~~---------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 205 YDNILNKPLQL----KP---------NITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHhCCcCC----CC---------CCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 23332221111 11 112357789999999999999998754433
No 110
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.3e-37 Score=317.90 Aligned_cols=255 Identities=21% Similarity=0.336 Sum_probs=194.2
Q ss_pred cccCccCceEEEEEEeCCCc---eEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec------CceeEE
Q 042348 373 FLLGKSTIGIVYKVALNNEE---AVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV------DEKLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lV 441 (686)
..||+|+||.||+|...+.. .||+|.++.. .....+.+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v 84 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVI 84 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEE
Confidence 46999999999999876432 5899988653 233456789999999999999999999987532 246899
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|||+++|+|.+++...........+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.
T Consensus 85 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 85 LPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 9999999999988543221122458999999999999999999999 8999999999999999999999999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~ 600 (686)
....... .......++..|+|||+..+..++.++|||||||++|||++ |+.||.....
T Consensus 162 ~~~~~~~---------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 220 (272)
T cd05075 162 IYNGDYY---------------------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN 220 (272)
T ss_pred cCcccce---------------------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 5422110 00011233556999999998889999999999999999999 8889854322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
. ........+. ... .. ......+.+++.+||+.||++|||+.++++.|+++
T Consensus 221 --~---~~~~~~~~~~-~~~--~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 221 --S---EIYDYLRQGN-RLK--QP---------PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --H---HHHHHHHcCC-CCC--CC---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 1122222211 110 00 11233578999999999999999999999999874
No 111
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1e-37 Score=317.81 Aligned_cols=255 Identities=19% Similarity=0.302 Sum_probs=201.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||.+... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 87 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAG 87 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCC
Confidence 36999999999999865 6889999987542 2233456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++...... ...+++..+..++.|++.||+|||+ ++++||||||+||+++.++.++|+|||++........
T Consensus 88 ~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~- 161 (267)
T cd08228 88 DLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT- 161 (267)
T ss_pred cHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH-
Confidence 999988643211 1357889999999999999999999 8999999999999999999999999999876532110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ...+
T Consensus 162 ----------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~ 216 (267)
T cd08228 162 ----------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSL 216 (267)
T ss_pred ----------------------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHH
Confidence 011234566799999998888999999999999999999999998543222 2222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
...+..... +.. ........+.+++.+||+.+|++||++.+|++.+++++
T Consensus 217 ~~~~~~~~~--~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 217 CQKIEQCDY--PPL---------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHhcCCC--CCC---------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 222221111 110 01123356889999999999999999999999999875
No 112
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.9e-37 Score=313.69 Aligned_cols=245 Identities=24% Similarity=0.424 Sum_probs=195.5
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
+.||+|+||.||+|...++..+|+|.+..... ...++.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 88 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLN 88 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHH
Confidence 46999999999999988777899999865432 33578899999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.... ..+++..+..++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++........
T Consensus 89 ~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~---- 156 (256)
T cd05059 89 YLRERK-----GKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT---- 156 (256)
T ss_pred HHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceeccccccc----
Confidence 997653 358999999999999999999999 89999999999999999999999999998754321100
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .. ...
T Consensus 157 ------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~---~~~ 213 (256)
T cd05059 157 ------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EV---VES 213 (256)
T ss_pred ------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HH---HHH
Confidence 0011123456999999988889999999999999999999 89998543221 11 112
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.... .... .+ .....++.+++.+||+.+|++|||+.|+++.|
T Consensus 214 ~~~~-~~~~---~~--------~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 214 VSAG-YRLY---RP--------KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHcC-CcCC---CC--------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 2111 1100 00 11234688999999999999999999999886
No 113
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-39 Score=327.59 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=209.8
Q ss_pred hcccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 372 AFLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.+.||.|.||.||.|.|+. .-.||||.++...+ ..++|+.|+.+|+.++|||+|+++|+|......|||.|||..|+|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccH
Confidence 3569999999999999875 56799999987654 468999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+||++... ..++.-..+.++.||+.|++||.. +++|||||.++|+|+.++..+|++|||+++++..+..+.
T Consensus 351 LdYLRecnr----~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA- 422 (1157)
T KOG4278|consen 351 LDYLRECNR----SEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA- 422 (1157)
T ss_pred HHHHHHhch----hhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCceec-
Confidence 999998653 457777789999999999999999 899999999999999999999999999999886433211
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~ 609 (686)
.....=.+.|.|||.+....++.|+|||+|||+|||+.| |-.||.+. ++. .+
T Consensus 423 ---------------------HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlS-qV 475 (1157)
T KOG4278|consen 423 ---------------------HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLS-QV 475 (1157)
T ss_pred ---------------------ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHH-HH
Confidence 011111346999999999999999999999999999998 88998543 222 23
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
...+.....|.. ++.|+..+++||..||+++|.+||++.|+-+.++.+-.
T Consensus 476 Y~LLEkgyRM~~-----------PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 476 YGLLEKGYRMDG-----------PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred HHHHhccccccC-----------CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 444444443321 23467789999999999999999999999999998753
No 114
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=7.1e-38 Score=327.96 Aligned_cols=242 Identities=21% Similarity=0.325 Sum_probs=191.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... +++.||||.+.... ....+.+..|..++..+ +|++|+++++++...+..++||||+++
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 85 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNG 85 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999876 46789999986532 22334567788888877 689999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 86 g~L~~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~- 155 (323)
T cd05616 86 GDLMYQIQQV------GRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG- 155 (323)
T ss_pred CCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-
Confidence 9999998754 358899999999999999999999 899999999999999999999999999987432111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.......||..|+|||++.+..++.++|||||||++|||+||+.||..... ..
T Consensus 156 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-----~~ 208 (323)
T cd05616 156 ----------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DE 208 (323)
T ss_pred ----------------------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH-----HH
Confidence 011234578889999999999999999999999999999999999954322 12
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM-----RHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~~~ 664 (686)
..+.+.......+. ....++.+++.+||+.||++|++. .++.++
T Consensus 209 ~~~~i~~~~~~~p~-------------~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 209 LFQSIMEHNVAYPK-------------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHHHHhCCCCCCC-------------cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 22333322221111 112357789999999999999985 555543
No 115
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.5e-38 Score=329.23 Aligned_cols=236 Identities=22% Similarity=0.344 Sum_probs=185.7
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHH-HHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAE-AIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+||+|+||.||+|+.. +++.||+|.+.... .....++..|.. +++.++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5899999999999875 57889999986532 122344555654 578899999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|...+... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 150 (321)
T cd05603 82 ELFFHLQRE------RCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-- 150 (321)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--
Confidence 999888654 357888999999999999999999 899999999999999999999999999987421111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||.... ....
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~ 204 (321)
T cd05603 151 ---------------------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQM 204 (321)
T ss_pred ---------------------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHH
Confidence 01123457888999999988889999999999999999999999995432 2222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 659 (686)
...+.......+. .....+.+++.+||+.||++||++.
T Consensus 205 ~~~i~~~~~~~~~-------------~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 205 YDNILHKPLQLPG-------------GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHhcCCCCCCC-------------CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 3333322111110 1223577899999999999999764
No 116
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.8e-37 Score=315.02 Aligned_cols=239 Identities=23% Similarity=0.359 Sum_probs=187.4
Q ss_pred ccCccCceEEEEEEeCC-------------CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeE
Q 042348 374 LLGKSTIGIVYKVALNN-------------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLL 440 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 440 (686)
.||+|+||.||+|.... ...|++|.+..........+.+|+.++++++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 48999999999998532 23588998876544445678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC-------eEE
Q 042348 441 IYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME-------PHI 513 (686)
Q Consensus 441 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~-------~kl 513 (686)
||||+++|+|..+++... ..+++..+.+++.||+.||+|||+ ++|+||||||+|||++.++. +++
T Consensus 82 v~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 82 VEEFVEFGPLDLFMHRKS-----DVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 999999999999987543 358999999999999999999999 89999999999999987664 899
Q ss_pred eecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc-CCCCCCcchHHHHHHHHHHHH-hC
Q 042348 514 SDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-VRKPTQKWDIYSYGVILLEMI-SG 591 (686)
Q Consensus 514 ~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwSlGvvl~ell-tG 591 (686)
+|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|
T Consensus 154 ~d~g~~~~~~~~---------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~ 206 (262)
T cd05077 154 SDPGIPITVLSR---------------------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNG 206 (262)
T ss_pred CCCCCCccccCc---------------------------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 999988643211 1223566799999886 466899999999999999998 58
Q ss_pred CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 592 KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 592 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
+.||......+ .......... ...+ ...++.+++.+||+.||++||++.+|++.++
T Consensus 207 ~~p~~~~~~~~------~~~~~~~~~~---~~~~----------~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 207 EIPLKDKTLAE------KERFYEGQCM---LVTP----------SCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred CCCCCCcchhH------HHHHHhcCcc---CCCC----------ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 88874322111 1111111111 1111 1235788999999999999999999998763
No 117
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9e-38 Score=327.56 Aligned_cols=246 Identities=19% Similarity=0.322 Sum_probs=192.7
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 5899999999999875 57889999997532 23345688999999988 6999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 150 (327)
T cd05617 82 DLMFHMQRQ------RKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-- 150 (327)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--
Confidence 999988654 358999999999999999999999 899999999999999999999999999987422110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc-chhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM-ELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~-~~~~~~ 607 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~ 209 (327)
T cd05617 151 ---------------------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTED 209 (327)
T ss_pred ---------------------CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHH
Confidence 0112345788899999999999999999999999999999999999543221 112222
Q ss_pred HHHHHHhhc-CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 042348 608 WIQLILEDR-KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM------RHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~ev~~~ 664 (686)
++....... ...+.. ....+.+++.+||+.||++|+++ .++.++
T Consensus 210 ~~~~~~~~~~~~~p~~-------------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 210 YLFQVILEKPIRIPRF-------------LSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHHHHHhCCCCCCCC-------------CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 222222221 111111 12346789999999999999985 466555
No 118
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.6e-37 Score=311.53 Aligned_cols=246 Identities=27% Similarity=0.387 Sum_probs=195.8
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
+||+|+||.||+|...++..+|+|.+...... ....+.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 58999999999999888899999998765322 23468899999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.... ..+++..+..++.|++.||.|+|+ ++++||||||+||++++++.+||+|||++.........
T Consensus 82 ~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~---- 149 (250)
T cd05085 82 FLRKKK-----DELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS---- 149 (250)
T ss_pred HHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccc----
Confidence 987543 357899999999999999999999 89999999999999999999999999998743321100
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||+..+..++.++||||||+++||+++ |..||...... .....
T Consensus 150 ------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-----~~~~~ 206 (250)
T cd05085 150 ------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-----QAREQ 206 (250)
T ss_pred ------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHH
Confidence 0011122456999999988889999999999999999998 99999543211 11111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
.... ... .. .......+.+++.+|++.+|++||++.|+++.|.
T Consensus 207 ~~~~-~~~-~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 207 VEKG-YRM-SC----------PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHcC-CCC-CC----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 1111 110 00 0112346889999999999999999999998875
No 119
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.6e-37 Score=317.87 Aligned_cols=258 Identities=25% Similarity=0.407 Sum_probs=196.2
Q ss_pred cccCccCceEEEEEEeC-----CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-----NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~ 445 (686)
..||+|+||.||++... ++..||+|.+........+.+.+|++++++++||||+++++++... ...++||||+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 89 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYL 89 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEec
Confidence 46999999999999753 4778999999776655567899999999999999999999987643 4678999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.....
T Consensus 90 ~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 90 PYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred CCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 9999999997543 358999999999999999999999 89999999999999999999999999999865422
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch--
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL-- 603 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~-- 603 (686)
.... .......++..|+|||++.+..++.++|||||||++|||++|..|+........
T Consensus 162 ~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~ 221 (284)
T cd05081 162 KEYY--------------------KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRM 221 (284)
T ss_pred Ccce--------------------eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhh
Confidence 1100 000111234459999999888899999999999999999998877532211000
Q ss_pred --------hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 604 --------NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 604 --------~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
................. ........+.+++.+||+.+|++|||+.||++.|+.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 222 MGNDKQGQMIVYHLIELLKNNGRLP-----------APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred cccccccccchHHHHHHHhcCCcCC-----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 00000011111110000 01112346889999999999999999999999998763
No 120
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=326.33 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=206.5
Q ss_pred hhcccCccCceEEEEEEeCC---C--ceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 371 SAFLLGKSTIGIVYKVALNN---E--EAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 371 ~~~~iG~G~~g~Vy~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
.+.+||.|-||.||+|.+.+ | -.||||..+.. ...+.+.|..|..+|++++|||||+++|+|.+ ...++|||.
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL 471 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMEL 471 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEec
Confidence 35689999999999998643 2 36899998874 44556789999999999999999999999964 578999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
++-|.|..+++.+. ..|+......++.||+.||+|||+ ...|||||..+|||+.....+||+|||+++.++.
T Consensus 472 ~~~GELr~yLq~nk-----~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 472 APLGELREYLQQNK-----DSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred ccchhHHHHHHhcc-----ccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 99999999998765 468888999999999999999999 8999999999999999999999999999998875
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccch
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~ 603 (686)
..... . +...-...|||||.+.-..++.++|||-|||+|||+++ |..||....+.+.
T Consensus 544 ~~yYk-----a-----------------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV 601 (974)
T KOG4257|consen 544 DAYYK-----A-----------------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV 601 (974)
T ss_pred cchhh-----c-----------------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce
Confidence 54311 1 11112456999999999999999999999999999998 9999976655442
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+-. ++.+... +.++.|+..++.++.+||+++|.+||.+.|+...|..+..
T Consensus 602 -----I~~-iEnGeRl-----------P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 602 -----IGH-IENGERL-----------PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -----EEE-ecCCCCC-----------CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 111 1111111 1223466688999999999999999999999999988764
No 121
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.9e-38 Score=330.22 Aligned_cols=242 Identities=21% Similarity=0.323 Sum_probs=189.2
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHH-HHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAE-AIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||+|.+.... .....++..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 5899999999999865 58899999986531 223345556655 467789999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|..++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-- 150 (325)
T cd05604 82 ELFFHLQRE------RSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-- 150 (325)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--
Confidence 999988754 458999999999999999999999 899999999999999999999999999986432111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... .+.
T Consensus 151 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~ 204 (325)
T cd05604 151 ---------------------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEM 204 (325)
T ss_pred ---------------------CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHH
Confidence 011234578889999999998999999999999999999999999954321 222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
...+...... +.+ .....+.+++.+|++.+|.+||++++.++.+
T Consensus 205 ~~~~~~~~~~----~~~---------~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 205 YDNILHKPLV----LRP---------GASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred HHHHHcCCcc----CCC---------CCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 3333322111 111 1123567899999999999999987444443
No 122
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.3e-37 Score=327.28 Aligned_cols=258 Identities=28% Similarity=0.401 Sum_probs=196.6
Q ss_pred hcccCccCceEEEEEEeC------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEec-CceeEEE
Q 042348 372 AFLLGKSTIGIVYKVALN------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSV-DEKLLIY 442 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-~~~~lV~ 442 (686)
.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++.++ +|+||++++++|... ...+++|
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ 91 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence 357999999999999642 24689999987542 23345688899999999 899999999988754 5678999
Q ss_pred eccCCCCHHHHhhcCCCc-------------------------------------------------------cccCCCC
Q 042348 443 DYIPNGSLATAIHGKAGI-------------------------------------------------------ISYRPLS 467 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~-------------------------------------------------------~~~~~l~ 467 (686)
||+++|+|.+++...... .....++
T Consensus 92 ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (337)
T cd05054 92 EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLT 171 (337)
T ss_pred ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCC
Confidence 999999999998653210 0013689
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCcc
Q 042348 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547 (686)
Q Consensus 468 ~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 547 (686)
|..+..++.||+.||+|||+ ++|+||||||+||++++++.+||+|||+++.+......
T Consensus 172 ~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~------------------- 229 (337)
T cd05054 172 LEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------------------- 229 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch-------------------
Confidence 99999999999999999999 89999999999999999999999999999865322110
Q ss_pred ccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHHHHhhcCCcccccCcc
Q 042348 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPF 626 (686)
Q Consensus 548 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 626 (686)
.......++..|+|||++.+..++.++|||||||++|||++ |..||......+ .+ .......... .. +
T Consensus 230 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~----~~~~~~~~~~--~~-~- 298 (337)
T cd05054 230 --VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EF----CRRLKEGTRM--RA-P- 298 (337)
T ss_pred --hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HH----HHHHhccCCC--CC-C-
Confidence 01112334567999999999999999999999999999998 999995432211 11 1111111110 00 0
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 627 LAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 627 l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
.....++.+++.+||+.+|++||++.||+++|+++-
T Consensus 299 -------~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 299 -------EYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred -------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 112346789999999999999999999999999864
No 123
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4e-37 Score=315.53 Aligned_cols=251 Identities=25% Similarity=0.366 Sum_probs=194.0
Q ss_pred cccCccCceEEEEEEeC-CCc----eEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEE----AVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+.||+|+||.||+|.+. ++. .+++|.+.... .....++..|+..+++++||||+++++++. ....++++||++
T Consensus 13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~ 91 (279)
T cd05111 13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSP 91 (279)
T ss_pred cccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCC
Confidence 46999999999999864 333 47888875432 223467888999999999999999999875 455789999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..+..|+.||+.||+|||+ ++++||||||+||++++++.+||+|||+++......
T Consensus 92 ~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 92 LGSLLDHVRQHR-----DSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred CCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 999999997654 458999999999999999999999 899999999999999999999999999998653221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. .......++..|+|||++.+..++.++|||||||++||+++ |+.||...... ..
T Consensus 164 ~~---------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~ 220 (279)
T cd05111 164 KK---------------------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EV 220 (279)
T ss_pred cc---------------------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HH
Confidence 10 00112335567999999988889999999999999999998 99999543221 11
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
. .......... .+. .+...+.+++.+||..+|++|||+.|+++.|+.+..
T Consensus 221 ~----~~~~~~~~~~---~~~--------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 221 P----DLLEKGERLA---QPQ--------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred H----HHHHCCCcCC---CCC--------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 1 1122211111 111 122356788999999999999999999999988653
No 124
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.4e-37 Score=312.68 Aligned_cols=248 Identities=29% Similarity=0.486 Sum_probs=196.9
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
...||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++. .+..++||||+++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~ 88 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLL 88 (260)
T ss_pred hheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHH
Confidence 346999999999999988888899999876433 3467999999999999999999999875 45689999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
++++.... ..+++.+++.++.|++.||+|||+ ++|+||||||+||++++++.++|+|||++.........
T Consensus 89 ~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~--- 158 (260)
T cd05070 89 DFLKDGEG----RALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT--- 158 (260)
T ss_pred HHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc---
Confidence 99976432 458999999999999999999999 89999999999999999999999999999765322110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
......++..|+|||...+..++.++||||||+++|||++ |+.||..... .+...
T Consensus 159 -------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~~~~~ 214 (260)
T cd05070 159 -------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-----REVLE 214 (260)
T ss_pred -------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHH
Confidence 0011223456999999988889999999999999999999 8899854322 11222
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
..... .... . .......+.+++.+|++.+|++|||+.++.+.|++
T Consensus 215 ~~~~~-~~~~------~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 215 QVERG-YRMP------C-----PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHcC-CCCC------C-----CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 22211 1110 0 01123468899999999999999999999999875
No 125
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.6e-37 Score=320.39 Aligned_cols=258 Identities=22% Similarity=0.274 Sum_probs=187.4
Q ss_pred cccCccCceEEEEEEeC--CCceEEEEEcCCCC--ccchHHHHHHHHHHhcc---CCCCcceeeEEEEe-----cCceeE
Q 042348 373 FLLGKSTIGIVYKVALN--NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKI---RHPNIVSLRAYFWS-----VDEKLL 440 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~-----~~~~~l 440 (686)
..||+|+||.||+|+.. ++..||+|++.... ......+.+|+.+++++ +||||+++++++.. ....++
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~l 86 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 86 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEE
Confidence 36999999999999863 46789999886432 22234566788777766 69999999999863 345799
Q ss_pred EEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 441 IYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 441 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
||||++ ++|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 87 v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 87 VFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred EEccCC-CCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 999996 699999875432 358999999999999999999999 899999999999999999999999999997
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 159 ~~~~~~------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~ 214 (290)
T cd07862 159 IYSFQM------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 214 (290)
T ss_pred eccCCc------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH
Confidence 543211 11234567789999999888899999999999999999999999965332
Q ss_pred cchhHHHHHHHHHhhcC--Ccc-------cccCcccccCCC--cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRK--PMT-------DILDPFLAHDLD--KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~--~~~-------~~~d~~l~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. +....+........ ... ..+.+....... .......+.+++.+||+.||++|||+.|++++
T Consensus 215 ~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 215 V--DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred H--HHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 1 11111111110000 000 000000000000 00122356789999999999999999999864
No 126
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.1e-37 Score=329.18 Aligned_cols=260 Identities=20% Similarity=0.324 Sum_probs=190.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecC-----ceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD-----EKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lV~e~ 444 (686)
..||+|+||.||+|... ++..||||++... ......++.+|++++++++||||+++++++.... ..++||||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~ 85 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFEL 85 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEec
Confidence 46999999999999865 5889999998643 2233456889999999999999999999986442 47999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
|. ++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~~-~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 86 ME-SDLHQVIKAN------DDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred CC-CCHHHHHHhc------ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 95 6999988754 358999999999999999999999 8999999999999999999999999999975432
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
..... .......||..|+|||++.+ ..++.++|||||||++|||+||+.||.....
T Consensus 156 ~~~~~--------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~-- 213 (338)
T cd07859 156 DTPTA--------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV-- 213 (338)
T ss_pred ccCcc--------------------ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--
Confidence 11100 11123567888999999865 6789999999999999999999999954322
Q ss_pred hhHHHHHHHHHhhcC----------Ccccc---cCcccccCCC--cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRK----------PMTDI---LDPFLAHDLD--KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~----------~~~~~---~d~~l~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+........ ..... +.+....... .......+.+++.+||+.||++|||+.|++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 214 VHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 111111111110000 00000 0000000000 00112356799999999999999999999977
No 127
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3e-38 Score=332.01 Aligned_cols=247 Identities=21% Similarity=0.296 Sum_probs=194.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGG 86 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCC
Confidence 46999999999999865 58899999987532 223456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 87 ~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~- 157 (330)
T cd05601 87 DLLSLLNRYE-----DQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM- 157 (330)
T ss_pred CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc-
Confidence 9999998653 358999999999999999999999 8999999999999999999999999999976542211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc------CCCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK------VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.......||..|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 158 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-- 214 (330)
T cd05601 158 ---------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-- 214 (330)
T ss_pred ---------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH--
Confidence 0112235678899999986 45678999999999999999999999954322
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+..+....... .. + .. ......+.+++.+|++ +|++||++.+++++
T Consensus 215 ---~~~~~~i~~~~~~~-~~--~---~~---~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 215 ---AKTYNNIMNFQRFL-KF--P---ED---PKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ---HHHHHHHHcCCCcc-CC--C---CC---CCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 12223332221111 00 0 00 0122357788889997 99999999999876
No 128
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2e-37 Score=317.47 Aligned_cols=254 Identities=21% Similarity=0.349 Sum_probs=195.6
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... .+..||||.+.... .....++.+|+.++++++||||+++++++...+..++||||+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~ 91 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 91 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecC
Confidence 46999999999998753 24679999986532 233457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCcc----ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGII----SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
++|+|.+++....... ....+++..+..++.|++.||+|||+ ++++||||||+||++++++.++|+|||+++.
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~ 168 (277)
T cd05062 92 TRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 168 (277)
T ss_pred CCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEECCCCCccc
Confidence 9999999997543211 01346888999999999999999999 8999999999999999999999999999875
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~ 600 (686)
....... .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 169 ~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~ 227 (277)
T cd05062 169 IYETDYY---------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN 227 (277)
T ss_pred cCCccee---------------------ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 4321110 00011234567999999988889999999999999999999 7888854322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
............ ... . ......+.+++.+||+.+|++|||+.|+++.|++
T Consensus 228 -----~~~~~~~~~~~~--~~~-----~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 228 -----EQVLRFVMEGGL--LDK-----P-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred -----HHHHHHHHcCCc--CCC-----C-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 122222222211 110 0 1123467899999999999999999999998864
No 129
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=333.94 Aligned_cols=246 Identities=25% Similarity=0.388 Sum_probs=201.8
Q ss_pred hcccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 372 AFLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.-++|+|.||+||.|+..+ ...+|||-+........+.+..||.+-++++|.|||+++|.+..+++.-|.||-++||||
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 3479999999999998654 567999999887777778899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCC--CHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec-CCCCeEEeecCcccccccccC
Q 042348 451 ATAIHGKAGIISYRPL--SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG-KNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l--~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~~~~~ 527 (686)
.++++..=| ++ ++.++--+-+||++||.|||+ +.|||||||-+|||++ -.|.+||+|||.++.+..-.
T Consensus 660 SsLLrskWG-----PlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin- 730 (1226)
T KOG4279|consen 660 SSLLRSKWG-----PLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN- 730 (1226)
T ss_pred HHHHHhccC-----CCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCC-
Confidence 999987643 45 778888999999999999999 8999999999999997 57899999999998653111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCC--CCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR--KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
..+....||..|||||++..+ .|+.++|||||||++.||.||++||...++...-
T Consensus 731 ----------------------P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA- 787 (1226)
T KOG4279|consen 731 ----------------------PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA- 787 (1226)
T ss_pred ----------------------ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-
Confidence 123456789999999999764 4899999999999999999999999766543321
Q ss_pred HHHHHHH-HhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLI-LEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.++.. ++..++ -+++-..+...++.+|+.+||.+||+++++++.
T Consensus 788 --MFkVGmyKvHP~-------------iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 788 --MFKVGMYKVHPP-------------IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred --hhhhcceecCCC-------------CcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 11111 111111 123445678899999999999999999999754
No 130
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.4e-37 Score=315.97 Aligned_cols=254 Identities=27% Similarity=0.442 Sum_probs=196.4
Q ss_pred cccCccCceEEEEEEe-----CCCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVAL-----NNEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|.. .++..|++|.+.... ......+.+|++++++++||||+++++++...+..++||||++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 90 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLN 90 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCC
Confidence 4699999999999974 245789999997533 2334678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCc-----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEee
Q 042348 447 NGSLATAIHGKAGI-----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISD 515 (686)
Q Consensus 447 ~gsL~~~l~~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 515 (686)
+++|.+++...... .....+++.++..++.|++.||+|||+ ++|+||||||+||++++++.+||+|
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~~~kl~d 167 (283)
T cd05090 91 QGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQLHVKISD 167 (283)
T ss_pred CCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCCcEEecc
Confidence 99999998643210 001358899999999999999999999 8999999999999999999999999
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCC
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLP 594 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P 594 (686)
||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 168 fg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p 226 (283)
T cd05090 168 LGLSREIYSADYY---------------------RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQP 226 (283)
T ss_pred ccccccccCCcce---------------------ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence 9999755322110 01112234567999999988889999999999999999999 9999
Q ss_pred ccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
|..... ..+ .... ..... ... . ......+.+++.+||+.||++||++.+|.++|..
T Consensus 227 ~~~~~~--~~~---~~~~-~~~~~-~~~-~---------~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 227 YYGFSN--QEV---IEMV-RKRQL-LPC-S---------EDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCH--HHH---HHHH-HcCCc-CCC-C---------CCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 854321 111 1222 11111 110 0 1123457789999999999999999999998864
No 131
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3e-37 Score=312.51 Aligned_cols=247 Identities=24% Similarity=0.335 Sum_probs=193.3
Q ss_pred ccCccCceEEEEEEeC---CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN---NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|.++ ++..+|+|++.... ....+++.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 4899999999999653 46789999986543 223567899999999999999999999885 45678999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 81 PLNKFLQKN------KHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 999999754 358899999999999999999999 89999999999999999999999999999765322110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~ 607 (686)
. .......++..|+|||.+....++.++|||||||++|||++ |+.||...... .
T Consensus 152 ~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~ 206 (257)
T cd05116 152 Y--------------------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-----E 206 (257)
T ss_pred e--------------------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----H
Confidence 0 00111223467999999988889999999999999999998 99999543221 2
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
+.+.+..... .+. . .....++.+++.+||+.||++||++.+|.+.|++
T Consensus 207 ~~~~i~~~~~--~~~-----~-----~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 207 VTQMIESGER--MEC-----P-----QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHCCCC--CCC-----C-----CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 2222222211 110 0 0123467799999999999999999999999976
No 132
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3e-37 Score=314.31 Aligned_cols=255 Identities=21% Similarity=0.327 Sum_probs=201.4
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++.. .++..++||.+... ......++.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 87 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG 87 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCC
Confidence 4699999999999986 47889999987643 2233457889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++...... ...+++..+..++.|++.||+|||+ ++++|+||||+||+++.++.++|+|||++........
T Consensus 88 ~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd08229 88 DLSRMIKHFKKQ--KRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT- 161 (267)
T ss_pred CHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc-
Confidence 999998743211 1468999999999999999999999 8999999999999999999999999999875532110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||++.+..++.++||||||+++|||++|..||..... +....
T Consensus 162 ----------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~ 216 (267)
T cd08229 162 ----------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSL 216 (267)
T ss_pred ----------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc---hHHHH
Confidence 01123466779999999888899999999999999999999999954322 12222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
.........+ .. ........+.+++.+||+.+|++|||+.+|++.++++.
T Consensus 217 ~~~~~~~~~~-------~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 217 CKKIEQCDYP-------PL----PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred hhhhhcCCCC-------CC----CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 2222211110 00 11123446889999999999999999999999998864
No 133
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.5e-37 Score=319.44 Aligned_cols=265 Identities=23% Similarity=0.301 Sum_probs=195.5
Q ss_pred cccCccCceEEEEEEe-----CCCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~ 444 (686)
..||+|+||.||++.. .++..||+|.+..... .....+.+|++++++++||||+++++++... ...++||||
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEY 89 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecC
Confidence 4699999999988653 3567899999876432 3356788999999999999999999998754 357899999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++|+|.+++... .+++.++..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++....
T Consensus 90 ~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 90 VPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred CCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 9999999999653 48999999999999999999999 8999999999999999999999999999986542
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
..... .......++..|+|||.+....++.++||||||+++|||+||+.||........+
T Consensus 160 ~~~~~--------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~ 219 (283)
T cd05080 160 GHEYY--------------------RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEE 219 (283)
T ss_pred cchhh--------------------ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhh
Confidence 21100 0011123345699999998888999999999999999999999998543221111
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
........ .......+..+...... .......++.+++.+||+.+|++|||+++|++.|+++.
T Consensus 220 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 220 MIGPKQGQ-MTVVRLIELLERGMRLP-CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcccccc-cchhhhhhhhhcCCCCC-CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 10000000 00000000011100000 01123457889999999999999999999999998864
No 134
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=341.84 Aligned_cols=249 Identities=23% Similarity=0.304 Sum_probs=196.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecC--------ceeEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD--------EKLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--------~~~lV 441 (686)
..||+|+||.||+|... +++.||||.+... .......+.+|+..+..++|+||+++++.+...+ ..++|
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV 117 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALV 117 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEE
Confidence 46999999999999854 6899999998653 2334567889999999999999999988776433 25799
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|||+++|+|.++++..... ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 118 ~Ey~~~gsL~~~l~~~~~~--~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~DFGls~~ 192 (496)
T PTZ00283 118 LDYANAGDLRQEIKSRAKT--NRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLGDFGFSKM 192 (496)
T ss_pred EeCCCCCcHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence 9999999999999754321 1468999999999999999999999 8999999999999999999999999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
+...... .......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 193 ~~~~~~~---------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~--- 248 (496)
T PTZ00283 193 YAATVSD---------------------DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE--- 248 (496)
T ss_pred ccccccc---------------------cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC---
Confidence 5422110 0112346788899999999989999999999999999999999999542
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+....+......... .+.+ ....++.+++.+||+.||++||++.+++++
T Consensus 249 --~~~~~~~~~~~~~~~---~~~~---------~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 249 --NMEEVMHKTLAGRYD---PLPP---------SISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred --CHHHHHHHHhcCCCC---CCCC---------CCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 222333333332211 0111 123467889999999999999999999875
No 135
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.4e-37 Score=331.36 Aligned_cols=246 Identities=20% Similarity=0.282 Sum_probs=193.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|.+... .......+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg 128 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGG 128 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCC
Confidence 46999999999999875 5789999998642 1223345788999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... .+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 129 ~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~- 197 (370)
T cd05596 129 DLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM- 197 (370)
T ss_pred cHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc-
Confidence 999998643 47888899999999999999999 8999999999999999999999999999975432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCC----CCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR----KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.......||..|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 198 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---- 252 (370)
T cd05596 198 ---------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---- 252 (370)
T ss_pred ---------------------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH----
Confidence 011234578889999988653 478999999999999999999999954322
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK--RPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~~ 664 (686)
......+........ . + .. ......+.+++.+||+.+|++ ||++.|++++
T Consensus 253 -~~~~~~i~~~~~~~~-~--~---~~---~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 253 -VGTYSKIMDHKNSLT-F--P---DD---IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -HHHHHHHHcCCCcCC-C--C---Cc---CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 222333333221110 0 0 00 012346778999999999988 9999999877
No 136
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.5e-37 Score=313.26 Aligned_cols=252 Identities=27% Similarity=0.470 Sum_probs=198.4
Q ss_pred hcccCccCceEEEEEEeCC-C---ceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALNN-E---EAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
.+.||+|+||.||+|.... + ..+|+|.+.... ....+.+..|++++++++||||+++++++...+..++||||++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYME 89 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCC
Confidence 3579999999999998752 2 379999987542 3345678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+++|.+++.... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++.......
T Consensus 90 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 90 NGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 999999997643 358999999999999999999999 899999999999999999999999999987553221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
... ........+..|+|||++....++.++|||||||++|||++ |+.||.....
T Consensus 162 ~~~--------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~----- 216 (268)
T cd05063 162 EGT--------------------YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN----- 216 (268)
T ss_pred ccc--------------------eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----
Confidence 100 00011122456999999988889999999999999999998 9999954322
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.+....+... ...+. ..+....+.+++.+||+.+|++||++.+|++.|+++
T Consensus 217 ~~~~~~i~~~-~~~~~-----------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 217 HEVMKAINDG-FRLPA-----------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHhcC-CCCCC-----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1222222221 11111 011234678999999999999999999999999875
No 137
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.5e-37 Score=316.74 Aligned_cols=254 Identities=27% Similarity=0.377 Sum_probs=197.2
Q ss_pred cccCccCceEEEEEEeCC------CceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALNN------EEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|...+ +..||+|++...... ..+.+.+|+.++++++||||+++++++...+..++++||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~ 90 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYC 90 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcC
Confidence 468999999999998632 478999999754332 2456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEee
Q 042348 446 PNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISD 515 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 515 (686)
++++|.+++...... .....+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|
T Consensus 91 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~kl~D 167 (283)
T cd05091 91 SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKISD 167 (283)
T ss_pred CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCceEecc
Confidence 999999998643110 011358889999999999999999999 8999999999999999999999999
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCC
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLP 594 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P 594 (686)
||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 168 fg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p 226 (283)
T cd05091 168 LGLFREVYAADYY---------------------KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 226 (283)
T ss_pred cccccccccchhe---------------------eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 9998755322110 01112334567999999988889999999999999999998 8888
Q ss_pred ccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
|..... .++...+...... .. ..+....+.+++.+||+.+|++||++++|+..|+.
T Consensus 227 ~~~~~~-----~~~~~~i~~~~~~--~~----------~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 227 YCGYSN-----QDVIEMIRNRQVL--PC----------PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCCCH-----HHHHHHHHcCCcC--CC----------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 854322 2223333222111 00 01233457899999999999999999999999875
No 138
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.6e-37 Score=310.87 Aligned_cols=248 Identities=29% Similarity=0.463 Sum_probs=196.1
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|...++..||+|.+..... ..+++.+|++++++++||||+++++++. .+..++||||+++|+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~ 89 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLD 89 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHH
Confidence 35899999999999987777899999875432 3467899999999999999999999874 456799999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++....+ ..+++..+..++.|++.||+|||+ ++++||||||+||++++++.++|+|||.++........
T Consensus 90 ~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~---- 158 (262)
T cd05071 90 FLKGEMG----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT---- 158 (262)
T ss_pred HHhhccc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccccc----
Confidence 9976432 357899999999999999999999 89999999999999999999999999999765422110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||+..+..++.++|||||||++|||+| |+.||......+ ....
T Consensus 159 ------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-----~~~~ 215 (262)
T cd05071 159 ------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLDQ 215 (262)
T ss_pred ------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-----HHHH
Confidence 0012234567999999988889999999999999999999 888885432211 1112
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.... .... ........+.+++.+|++.+|++||++.++.+.|++.
T Consensus 216 ~~~~-~~~~-----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 216 VERG-YRMP-----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HhcC-CCCC-----------CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 2111 1110 0112345688999999999999999999999999863
No 139
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.9e-37 Score=332.19 Aligned_cols=269 Identities=19% Similarity=0.287 Sum_probs=193.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg 86 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG 86 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence 46999999999999865 57899999986532 233456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 87 DMMSLLIRM------EVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999999764 358899999999999999999999 89999999999999999999999999998754321110
Q ss_pred cccc---------------cccc---ccCCCC---C--CC-ccccccccCCCCCccccCcccccCCCCCCcchHHHHHHH
Q 042348 529 PEVH---------------WEQS---TTGTPL---Q--SS-PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVI 584 (686)
Q Consensus 529 ~~~~---------------~~~~---~~g~~~---~--~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvv 584 (686)
.... +... ..+... . .. ..........+||..|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 0000 0000 000000 0 00 000001134578999999999988889999999999999
Q ss_pred HHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHh--ccccCCCCCCCHHHHH
Q 042348 585 LLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALD--CVHKSPDKRPSMRHVC 662 (686)
Q Consensus 585 l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~--cl~~dP~~RPs~~ev~ 662 (686)
+|||+||+.||......+. ...+........ ..... ....++.+++.+ |+..+|..||++.|++
T Consensus 238 l~elltG~~Pf~~~~~~~~-----~~~i~~~~~~~~------~~~~~---~~s~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTET-----QLKVINWENTLH------IPPQV---KLSPEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred HHHHHhCCCCCcCCCHHHH-----HHHHHccccccC------CCCCC---CCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 9999999999965332211 111211111100 00000 012345567766 5666777799999998
Q ss_pred HH
Q 042348 663 DS 664 (686)
Q Consensus 663 ~~ 664 (686)
++
T Consensus 304 ~h 305 (381)
T cd05626 304 AH 305 (381)
T ss_pred cC
Confidence 87
No 140
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.9e-37 Score=311.53 Aligned_cols=255 Identities=20% Similarity=0.328 Sum_probs=202.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||+|... +++.||+|.++.. .....+.+.+|++++++++|+||+++++++...+..++||||+++|
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAG 87 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCC
Confidence 46999999999999976 7889999988642 2233567899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++...... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||+++.......
T Consensus 88 ~L~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~- 161 (267)
T cd08224 88 DLSRMIKHFKKQ--KRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT- 161 (267)
T ss_pred CHHHHHHHhccc--CCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc-
Confidence 999998653211 1458999999999999999999999 8999999999999999999999999999875532211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||.... .+..+.
T Consensus 162 ----------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~ 216 (267)
T cd08224 162 ----------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSL 216 (267)
T ss_pred ----------------------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHH
Confidence 0112345667999999988889999999999999999999999985432 222222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
......... ... ........+.+++.+||+.+|++||++.+|++.|++++
T Consensus 217 ~~~~~~~~~--~~~---------~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 217 CKKIEKCDY--PPL---------PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HhhhhcCCC--CCC---------ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 222221111 000 01123346789999999999999999999999999875
No 141
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.2e-37 Score=315.57 Aligned_cols=239 Identities=23% Similarity=0.356 Sum_probs=187.0
Q ss_pred ccCccCceEEEEEEeCC--------CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNN--------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
.||+|+||.||+|.... ...|++|.+........+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 58999999999997642 2348888886654445567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC--------eEEeecC
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME--------PHISDFG 517 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~--------~kl~DfG 517 (686)
++|+|.++++... ..+++..++.++.||+.||+|||+ ++|+||||||+||+++.++. ++++|||
T Consensus 82 ~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 82 KFGSLDTYLKKNK-----NLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred CCCcHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 9999999998654 358999999999999999999999 89999999999999987765 5888888
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCC-CCc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGK-LPM 595 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~-~P~ 595 (686)
++...... ....++..|+|||++.+ ..++.++|||||||++|||++|. .||
T Consensus 154 ~~~~~~~~---------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~ 206 (258)
T cd05078 154 ISITVLPK---------------------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPL 206 (258)
T ss_pred cccccCCc---------------------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCCh
Confidence 87533211 12345667999999876 45799999999999999999985 555
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
....... .. .........+. ....++.+++.+||+.||++|||++++++.|+
T Consensus 207 ~~~~~~~-----~~-~~~~~~~~~~~-------------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 207 SALDSQK-----KL-QFYEDRHQLPA-------------PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred hhccHHH-----HH-HHHHccccCCC-------------CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 3322111 11 11111111111 11235789999999999999999999998874
No 142
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.5e-37 Score=311.14 Aligned_cols=249 Identities=24% Similarity=0.393 Sum_probs=198.0
Q ss_pred ccCccCceEEEEEEeCC--C--ceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALNN--E--EAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|++|.||+|.+.+ + ..||||.+..... ...+.+.+|++++++++||||+++++++.. ...++||||+++|
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 58999999999998753 2 3689999987655 556789999999999999999999999988 8899999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++..... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 81 SLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred cHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999986532 358999999999999999999999 89999999999999999999999999999866432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~ 607 (686)
. .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... +
T Consensus 154 ~--------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~ 208 (257)
T cd05040 154 Y--------------------VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-----Q 208 (257)
T ss_pred e--------------------ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----H
Confidence 0 01112345677999999988889999999999999999999 99998543221 1
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
..+.......... .+ ......+.+++.+|++.+|++||++.|+++.|.
T Consensus 209 ~~~~~~~~~~~~~---~~--------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 209 ILKKIDKEGERLE---RP--------EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHhcCCcCC---CC--------ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 1222221111100 00 112346889999999999999999999999875
No 143
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.8e-37 Score=327.84 Aligned_cols=257 Identities=24% Similarity=0.307 Sum_probs=198.5
Q ss_pred hcccCccCceEEEEEEeC------CCceEEEEEcCCCCc-cchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVALN------NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e 443 (686)
...||+|+||.||+|.+. .+..||||+++.... ...+.+.+|++++.++. |||||++++++...+..++|||
T Consensus 42 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E 121 (401)
T cd05107 42 GRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITE 121 (401)
T ss_pred hhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEe
Confidence 457999999999999864 245799999976422 22457889999999997 9999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCc---------------------------------------------------------------
Q 042348 444 YIPNGSLATAIHGKAGI--------------------------------------------------------------- 460 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~--------------------------------------------------------------- 460 (686)
|+++|+|.++++.....
T Consensus 122 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (401)
T cd05107 122 YCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKY 201 (401)
T ss_pred ccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhh
Confidence 99999999999754210
Q ss_pred -----------------------------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCe
Q 042348 461 -----------------------------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511 (686)
Q Consensus 461 -----------------------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~ 511 (686)
.....+++..+.+|+.|++.||+|||+ ++|+||||||+|||+++++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~~~~~~ 278 (401)
T cd05107 202 ADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLICEGKLV 278 (401)
T ss_pred hhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEEeCCCEE
Confidence 011347888899999999999999999 899999999999999999999
Q ss_pred EEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-
Q 042348 512 HISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS- 590 (686)
Q Consensus 512 kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt- 590 (686)
||+|||+++........ .......++..|+|||.+....++.++|||||||++|||++
T Consensus 279 kL~DfGla~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~ 337 (401)
T cd05107 279 KICDFGLARDIMRDSNY---------------------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTL 337 (401)
T ss_pred EEEecCcceeccccccc---------------------ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHc
Confidence 99999999754321110 00112345677999999988889999999999999999998
Q ss_pred CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 591 GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 591 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
|..||......+ ............. .+ ......+.+++.+||+.+|++||+++||++.|+++
T Consensus 338 g~~P~~~~~~~~-----~~~~~~~~~~~~~---~p--------~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 338 GGTPYPELPMNE-----QFYNAIKRGYRMA---KP--------AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred CCCCCCCCCchH-----HHHHHHHcCCCCC---CC--------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 899985432211 1111111111110 01 01234678999999999999999999999999875
No 144
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7.6e-37 Score=310.41 Aligned_cols=252 Identities=25% Similarity=0.420 Sum_probs=192.0
Q ss_pred ccCccCceEEEEEEeCC----CceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEe-cCceeEEEeccCC
Q 042348 374 LLGKSTIGIVYKVALNN----EEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS-VDEKLLIYDYIPN 447 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV~e~~~~ 447 (686)
.||+|+||.||+|...+ ...||+|++... .....+.+.+|+.+++.++||||+++++++.. ++..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 58999999999998532 357999998543 33345678899999999999999999998764 4567999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.......
T Consensus 82 ~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 82 GDLRNFIRSET-----HNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999997643 346788889999999999999999 8999999999999999999999999999875432110
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhC-CCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG-KLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG-~~P~~~~~~~~~~~~ 606 (686)
.. ........++..|+|||.+.+..++.++|||||||++|||++| ..||.... ..
T Consensus 154 ~~-------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----~~ 209 (262)
T cd05058 154 YS-------------------VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-----SF 209 (262)
T ss_pred ee-------------------ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-----HH
Confidence 00 0001122345679999999888899999999999999999995 55553321 11
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
.............. + ...+..+.+++.+||+.+|++||++.||++.|+++.
T Consensus 210 ~~~~~~~~~~~~~~----~--------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 210 DITVYLLQGRRLLQ----P--------EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHHHhcCCCCCC----C--------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 22222222211100 0 011236789999999999999999999999998864
No 145
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.6e-37 Score=314.80 Aligned_cols=248 Identities=26% Similarity=0.351 Sum_probs=193.7
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|.. .+++.||+|++..........+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~ 94 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQ 94 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHH
Confidence 4699999999999986 467889999987654445567889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
++++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.++|+|||+++.......
T Consensus 95 ~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~---- 161 (267)
T cd06646 95 DIYHVT------GPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA---- 161 (267)
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccccc----
Confidence 998754 358899999999999999999999 8999999999999999999999999999975532110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+. ...++.++|||||||++|||++|+.||......+.
T Consensus 162 -------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~----- 217 (267)
T cd06646 162 -------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA----- 217 (267)
T ss_pred -------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-----
Confidence 011234667799999874 34578899999999999999999999854322111
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
........ ...+.... .......+.+++.+||+.+|++||++++++++|
T Consensus 218 ~~~~~~~~-----~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 218 LFLMSKSN-----FQPPKLKD---KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred heeeecCC-----CCCCCCcc---ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00000000 00011100 011234678999999999999999999998764
No 146
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=6.3e-37 Score=310.11 Aligned_cols=249 Identities=28% Similarity=0.412 Sum_probs=195.5
Q ss_pred ccCccCceEEEEEEeCC----CceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALNN----EEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|.... +..+|+|.+..... ...+++.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~ 80 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLG 80 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCC
Confidence 58999999999997532 26899999876543 24467899999999999999999999876 45689999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 81 PLLKYLKKR------REIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred cHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 999999765 358999999999999999999999 89999999999999999999999999999865422210
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~ 607 (686)
. .......++..|+|||...+..++.++|||||||++|||++ |+.||..... ..+.
T Consensus 152 ~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~- 208 (257)
T cd05060 152 Y--------------------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVI- 208 (257)
T ss_pred c--------------------ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHH-
Confidence 0 00111223456999999988889999999999999999998 9999954322 1222
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
..+... .... . .......+.+++.+||+.+|++||++.++++.|+++.
T Consensus 209 --~~~~~~-~~~~---~--------~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 209 --AMLESG-ERLP---R--------PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --HHHHcC-CcCC---C--------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 222111 1110 0 0112346789999999999999999999999998864
No 147
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=8.2e-37 Score=309.87 Aligned_cols=247 Identities=28% Similarity=0.458 Sum_probs=195.4
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|++|.||+|....+..+|+|.+..... ..+.+.+|++++++++||||+++++++. .+..++||||+++|+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 89 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLD 89 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHH
Confidence 35999999999999988777899998865432 3467899999999999999999999875 456899999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++........
T Consensus 90 ~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~---- 158 (260)
T cd05069 90 FLKEGDG----KYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT---- 158 (260)
T ss_pred HHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCccc----
Confidence 9976432 358999999999999999999999 89999999999999999999999999999765322110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||+..+..++.++|||||||++|||+| |+.||...... .. ...
T Consensus 159 ------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~---~~~ 215 (260)
T cd05069 159 ------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EV---LEQ 215 (260)
T ss_pred ------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HH---HHH
Confidence 0011234567999999988889999999999999999999 89998543221 11 122
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
.... .... . .......+.+++.+||+.||++||++++|++.|++
T Consensus 216 ~~~~-~~~~------~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 216 VERG-YRMP------C-----PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHcC-CCCC------C-----CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2111 1110 0 01123468899999999999999999999999876
No 148
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=5.9e-37 Score=315.21 Aligned_cols=247 Identities=22% Similarity=0.236 Sum_probs=192.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|.+..... .....+.+|++++++++|+||+++.+++..++..++||||++++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGG 85 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCc
Confidence 46999999999999875 578999999865322 22345788999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||++.......
T Consensus 86 ~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 86 DLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred cHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 99998875432 358999999999999999999999 899999999999999999999999999986542111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......|+..|+|||++.+..++.++|||||||++|||++|+.||....... .....
T Consensus 157 ----------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~ 213 (285)
T cd05632 157 ----------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEV 213 (285)
T ss_pred ----------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 0112356788999999988889999999999999999999999995432211 11111
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~ 664 (686)
.......... ..+ .....+.+++.+||+.||++||+ +.+++++
T Consensus 214 ~~~~~~~~~~----~~~---------~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 214 DRRVLETEEV----YSA---------KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HHhhhccccc----cCc---------cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 1111111111 111 12235678999999999999999 5666665
No 149
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.9e-37 Score=319.00 Aligned_cols=258 Identities=25% Similarity=0.399 Sum_probs=200.1
Q ss_pred hcccCccCceEEEEEEeC--------CCceEEEEEcCCC-CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEE
Q 042348 372 AFLLGKSTIGIVYKVALN--------NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLI 441 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 441 (686)
...||+|+||.||+|+.. ++..||+|.+... .....+++.+|+.+++.+ +||||+++++++...+..++|
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 99 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 99 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEE
Confidence 457999999999999742 2357999988653 233456789999999999 899999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCe
Q 042348 442 YDYIPNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~ 511 (686)
|||+++|+|.+++...... .....+++.++..++.|++.||+|||+ ++|+||||||+||++++++.+
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili~~~~~~ 176 (304)
T cd05101 100 VEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLVTENNVM 176 (304)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEEcCCCcE
Confidence 9999999999999764321 011358899999999999999999999 899999999999999999999
Q ss_pred EEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-
Q 042348 512 HISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS- 590 (686)
Q Consensus 512 kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt- 590 (686)
||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++
T Consensus 177 kl~D~g~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 235 (304)
T cd05101 177 KIADFGLARDVNNIDYY---------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 235 (304)
T ss_pred EECCCccceeccccccc---------------------ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcC
Confidence 99999999865322110 00111234567999999988889999999999999999998
Q ss_pred CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 591 GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 591 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
|..||.... ..++...+.... ... .+ ......+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 236 g~~p~~~~~-----~~~~~~~~~~~~-~~~---~~--------~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 236 GGSPYPGIP-----VEELFKLLKEGH-RMD---KP--------ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred CCCCcccCC-----HHHHHHHHHcCC-cCC---CC--------CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 788884322 222233222221 110 00 1233468889999999999999999999999998754
No 150
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.4e-37 Score=309.75 Aligned_cols=245 Identities=23% Similarity=0.380 Sum_probs=197.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|++|.||+|... +++.|++|.+... .....+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGD 85 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCc
Confidence 46999999999999875 5789999988643 33445778999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.++++...+ ..+++..+..++.|++.||+|||+ ++++||||||+||++++++.++|+|||+++.......
T Consensus 86 L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~-- 156 (256)
T cd08529 86 LHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN-- 156 (256)
T ss_pred HHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCccc--
Confidence 9999986532 468999999999999999999999 8999999999999999999999999999876542211
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......++..|+|||+..+..++.++|||||||++|||++|+.||..... ....
T Consensus 157 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~ 210 (256)
T cd08529 157 ---------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GALI 210 (256)
T ss_pred ---------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHH
Confidence 01123456779999999988899999999999999999999999954331 1112
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ ... . ......+.+++.+||+.+|++||++.+++++
T Consensus 211 ~~~~~~~~--~~~-----~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 211 LKIIRGVF--PPV-----S-----QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHcCCC--CCC-----c-----cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 22222211 110 0 0123468899999999999999999999865
No 151
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.5e-37 Score=323.65 Aligned_cols=236 Identities=22% Similarity=0.326 Sum_probs=188.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... +++.||+|.+... .....+.+..|..++..+. |++|+++++++...+..++||||+++
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~ 85 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNG 85 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCC
Confidence 47999999999999865 5889999998653 2233456788999998885 57888999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 86 g~L~~~i~~~------~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 86 GDLMYHIQQV------GKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 9999998754 358999999999999999999999 899999999999999999999999999987432111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..
T Consensus 156 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~ 208 (323)
T cd05615 156 ----------------------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-----DE 208 (323)
T ss_pred ----------------------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-----HH
Confidence 011234578889999999988899999999999999999999999954322 12
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 658 (686)
..+.+.......+.. ....+.+++.+||+.+|++|++.
T Consensus 209 ~~~~i~~~~~~~p~~-------------~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 209 LFQSIMEHNVSYPKS-------------LSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHHhCCCCCCcc-------------CCHHHHHHHHHHcccCHhhCCCC
Confidence 233333322221111 12356789999999999999985
No 152
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.8e-38 Score=332.31 Aligned_cols=268 Identities=20% Similarity=0.284 Sum_probs=199.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||++.... ......+..|++++..++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGG 86 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCC
Confidence 46999999999999976 68899999986532 233467889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 87 DLMNLLIRK------DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 999999865 358999999999999999999999 89999999999999999999999999999866433210
Q ss_pred ccccccccc------cCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 529 PEVHWEQST------TGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 529 ~~~~~~~~~------~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
......... ...................||..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-- 235 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL-- 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH--
Confidence 000000000 000000000001122345688999999999999999999999999999999999999955332
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-HHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-MRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ev~~~ 664 (686)
......+........ -|. . ......+.+++.+|++ ||++||+ +.|++++
T Consensus 236 ---~~~~~~i~~~~~~~~---~p~---~---~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 ---QETYNKIINWKESLR---FPP---D---PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ---HHHHHHHhccCCccc---CCC---C---CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 112222222111100 000 0 0023457788999997 9999999 9999987
No 153
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.3e-37 Score=318.05 Aligned_cols=256 Identities=25% Similarity=0.383 Sum_probs=197.2
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... ....+++|.+.... .....++.+|+.++++++||||+++++.+...+..++||||+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYA 85 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEec
Confidence 46999999999999753 23568888886543 233567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCc------------------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC
Q 042348 446 PNGSLATAIHGKAGI------------------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK 507 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~ 507 (686)
++|+|.+++...... .....+++..+..++.|++.||+|||+ ++|+||||||+||++++
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~nill~~ 162 (290)
T cd05045 86 KYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAE 162 (290)
T ss_pred CCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhheEEEcC
Confidence 999999998753211 112458899999999999999999999 89999999999999999
Q ss_pred CCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHH
Q 042348 508 NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587 (686)
Q Consensus 508 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~e 587 (686)
++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++||
T Consensus 163 ~~~~kl~dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~e 221 (290)
T cd05045 163 GRKMKISDFGLSRDVYEEDSY---------------------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 221 (290)
T ss_pred CCcEEeccccccccccCccch---------------------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHH
Confidence 999999999998754322110 00011223456999999988889999999999999999
Q ss_pred HHh-CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 588 MIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 588 llt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
|+| |+.||..... ..+ ... ........ . .......+.+++.+||+.+|++||++.|+++.|+
T Consensus 222 l~t~g~~p~~~~~~--~~~---~~~-~~~~~~~~------~-----~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~ 284 (290)
T cd05045 222 IVTLGGNPYPGIAP--ERL---FNL-LKTGYRME------R-----PENCSEEMYNLMLTCWKQEPDKRPTFADISKELE 284 (290)
T ss_pred HHhcCCCCCCCCCH--HHH---HHH-HhCCCCCC------C-----CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 999 9999854321 111 111 11111100 0 0112346788999999999999999999999999
Q ss_pred ccc
Q 042348 667 RVN 669 (686)
Q Consensus 667 ~i~ 669 (686)
++-
T Consensus 285 ~~~ 287 (290)
T cd05045 285 KMM 287 (290)
T ss_pred HHH
Confidence 864
No 154
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=8.6e-37 Score=309.56 Aligned_cols=252 Identities=28% Similarity=0.440 Sum_probs=200.1
Q ss_pred ccCccCceEEEEEEeCC----CceEEEEEcCCCCccc-hHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALNN----EEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|.... +..|++|.+....... .+.+.+|++.+.+++|+||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 58999999999998764 7789999997654332 678999999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCc---cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 449 SLATAIHGKAGI---ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 449 sL~~~l~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
+|.+++...... .....+++..+..++.|++.||+|||+ ++++||||||+||++++++.+||+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999999875210 001468999999999999999999999 89999999999999999999999999999865432
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~ 604 (686)
... .......++..|+|||.+....++.++||||+|+++|||++ |..||.....
T Consensus 159 ~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---- 213 (262)
T cd00192 159 DYY---------------------RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---- 213 (262)
T ss_pred ccc---------------------ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH----
Confidence 210 01122345677999999988889999999999999999999 6999955421
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
........... .. ..+ .....++.+++.+||+.+|++|||+.|++++|+
T Consensus 214 -~~~~~~~~~~~-~~---~~~--------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 214 -EEVLEYLRKGY-RL---PKP--------EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -HHHHHHHHcCC-CC---CCC--------ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11222222211 10 000 112346889999999999999999999999874
No 155
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8.5e-37 Score=313.27 Aligned_cols=254 Identities=26% Similarity=0.416 Sum_probs=198.5
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||++... ++..+++|.+..........+.+|++++++++|+||+++++++...+..++||||++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 90 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMR 90 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCC
Confidence 46999999999999642 356799999877665666789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCc---------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecC
Q 042348 447 NGSLATAIHGKAGI---------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 447 ~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
+|+|.+++...... .....+++..++.++.|++.||+|||+ ++++||||||+||++++++.+||+|||
T Consensus 91 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~kL~dfg 167 (280)
T cd05092 91 HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVVKIGDFG 167 (280)
T ss_pred CCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCEEECCCC
Confidence 99999999754311 011358999999999999999999999 899999999999999999999999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMI 596 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~ 596 (686)
+++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 168 ~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 226 (280)
T cd05092 168 MSRDIYSTDYY---------------------RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred ceeEcCCCcee---------------------ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 98754321100 00112233567999999988889999999999999999998 999985
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
..... +.+......... . .+ ......+.+++.+||+.||++||++.||.+.|++
T Consensus 227 ~~~~~-----~~~~~~~~~~~~--~--~~--------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 227 QLSNT-----EAIECITQGREL--E--RP--------RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred cCCHH-----HHHHHHHcCccC--C--CC--------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 43321 112222222111 0 00 0122357799999999999999999999998863
No 156
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.2e-37 Score=315.56 Aligned_cols=257 Identities=23% Similarity=0.374 Sum_probs=196.7
Q ss_pred hcccCccCceEEEEEEe-----CCCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVAL-----NNEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e 443 (686)
...||+|+||.||++.. .++..||+|.++... ......+.+|++++++++||||+++++++... ...++|||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05079 9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 88 (284)
T ss_pred ceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEE
Confidence 34699999999999974 347789999987542 33346799999999999999999999998875 56789999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++++|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.+.
T Consensus 89 ~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 89 FLPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred ccCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 999999999997543 358999999999999999999999 999999999999999999999999999998654
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCc---
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGS--- 600 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~--- 600 (686)
...... .......++..|+|||++.+..++.++|||||||++|||+|++.|+.....
T Consensus 161 ~~~~~~--------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~ 220 (284)
T cd05079 161 TDKEYY--------------------TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFL 220 (284)
T ss_pred cCccce--------------------eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhh
Confidence 221100 011123455679999999888899999999999999999998776522111
Q ss_pred -------cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 601 -------MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 601 -------~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.+......+... ....... ........+.+++.+||+.+|++||++.++++.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 221 KMIGPTHGQMTVTRLVRVL-EEGKRLP-----------RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred hhcccccccccHHHHHHHH-HcCccCC-----------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 011111111111 1111100 0011334688999999999999999999999999875
No 157
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.2e-37 Score=315.40 Aligned_cols=253 Identities=27% Similarity=0.392 Sum_probs=196.5
Q ss_pred cccCccCceEEEEEEeC-CCc----eEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEE----AVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+.||+|+||.||+|.+. ++. .||+|.+.... ....+++.+|+.+++.++||||+++++++.. ...+++|||++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~ 91 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMP 91 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCC
Confidence 46999999999999853 343 48999986543 2334678899999999999999999999975 45789999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.++++... ..+++..++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 92 ~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~ 163 (279)
T cd05109 92 YGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 163 (279)
T ss_pred CCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence 999999997653 358999999999999999999999 899999999999999999999999999998664221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. .......++..|+|||...+..++.++|||||||++|||++ |..||..... ..+
T Consensus 164 ~~---------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~ 220 (279)
T cd05109 164 TE---------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REI 220 (279)
T ss_pred ce---------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHH
Confidence 10 00111223456999999988889999999999999999998 8999854322 112
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIST 672 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 672 (686)
..+ ......... .......+.+++.+||+.||++||++.++++.|+++....
T Consensus 221 ~~~----~~~~~~~~~-----------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 221 PDL----LEKGERLPQ-----------PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHH----HHCCCcCCC-----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 222 111111110 0112346788999999999999999999999998876544
No 158
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.7e-37 Score=316.27 Aligned_cols=256 Identities=26% Similarity=0.399 Sum_probs=198.4
Q ss_pred hcccCccCceEEEEEEeCC------CceEEEEEcCCC-CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVALNN------EEAVAVRRLGNG-GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
...||+|+||.||++.... ...+|+|.+... ......++.+|+.++.++ +|+||+++++++...+..++|||
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e 96 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVE 96 (293)
T ss_pred eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEE
Confidence 3469999999999998642 357999998753 223345688999999999 89999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCC----------ccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEE
Q 042348 444 YIPNGSLATAIHGKAG----------IISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHI 513 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~----------~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 513 (686)
|+++|+|.++++.... ......+++..+++++.|++.||+|||+ ++|+||||||+||++++++.+||
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~~~~~~kL 173 (293)
T cd05053 97 YAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVTEDHVMKI 173 (293)
T ss_pred eCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEcCCCeEEe
Confidence 9999999999975321 0112468999999999999999999999 89999999999999999999999
Q ss_pred eecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CC
Q 042348 514 SDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GK 592 (686)
Q Consensus 514 ~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~ 592 (686)
+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |.
T Consensus 174 ~Dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 232 (293)
T cd05053 174 ADFGLARDIHHIDYY---------------------RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG 232 (293)
T ss_pred Cccccccccccccce---------------------eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCC
Confidence 999999865422110 00111223456999999988889999999999999999998 99
Q ss_pred CCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 593 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.||...... +........ ... .. .......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 233 ~p~~~~~~~-----~~~~~~~~~-~~~-~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 233 SPYPGIPVE-----ELFKLLKEG-YRM-EK----------PQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred CCCCCCCHH-----HHHHHHHcC-CcC-CC----------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 998543221 112222111 110 00 011234688999999999999999999999999876
No 159
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.6e-37 Score=316.17 Aligned_cols=260 Identities=21% Similarity=0.298 Sum_probs=194.7
Q ss_pred cccCccCceEEEEEEeCC---------------CceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecC
Q 042348 373 FLLGKSTIGIVYKVALNN---------------EEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD 436 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 436 (686)
+.||+|+||.||++...+ ...||+|.+... .......|.+|++++++++||||+++++++...+
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 90 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDD 90 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC
Confidence 469999999999987542 235899998754 2233457999999999999999999999999999
Q ss_pred ceeEEEeccCCCCHHHHhhcCCCc------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC
Q 042348 437 EKLLIYDYIPNGSLATAIHGKAGI------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME 510 (686)
Q Consensus 437 ~~~lV~e~~~~gsL~~~l~~~~~~------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~ 510 (686)
..++||||+++++|.+++...... .....+++..++.++.|++.||+|||+ ++++||||||+||++++++.
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nill~~~~~ 167 (295)
T cd05097 91 PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCLVGNHYT 167 (295)
T ss_pred ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEEEcCCCc
Confidence 999999999999999999653210 011247899999999999999999999 89999999999999999999
Q ss_pred eEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh
Q 042348 511 PHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590 (686)
Q Consensus 511 ~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt 590 (686)
+||+|||+++........ .......++..|+|||+.....++.++|||||||++|||++
T Consensus 168 ~kl~dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~ 226 (295)
T cd05097 168 IKIADFGMSRNLYSGDYY---------------------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226 (295)
T ss_pred EEecccccccccccCcce---------------------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHH
Confidence 999999998754321100 01112234567999999988889999999999999999998
Q ss_pred --CCCCccccCccchhHHHHHHHHHhhc-CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 591 --GKLPMIQIGSMELNIVQWIQLILEDR-KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 591 --G~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
|..||..... ......+....... ........ ......+.+++.+||+.||++||++.+|++.|++
T Consensus 227 ~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 227 LCKEQPYSLLSD--EQVIENTGEFFRNQGRQIYLSQT---------PLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred cCCCCCCcccCh--HHHHHHHHHhhhhccccccCCCC---------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 6667744322 11222111111111 10000000 0123468899999999999999999999998864
No 160
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.2e-37 Score=309.97 Aligned_cols=243 Identities=25% Similarity=0.415 Sum_probs=193.4
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEE-ecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW-SVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~-~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||++... +..||+|.+.... ..+.+.+|+.++++++|+||+++++++. ..+..++||||+++++|.
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (256)
T cd05082 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88 (256)
T ss_pred eeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHH
Confidence 46999999999999876 6779999986543 3467899999999999999999999765 446789999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++..... ..+++..++.++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----- 156 (256)
T cd05082 89 DYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 156 (256)
T ss_pred HHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccC-----
Confidence 99976542 358899999999999999999999 899999999999999999999999999987432111
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
.....+..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+...
T Consensus 157 ---------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~~~ 210 (256)
T cd05082 157 ---------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVP 210 (256)
T ss_pred ---------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHH
Confidence 01122346999999988889999999999999999998 999985322 222222
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.+..+..+ ... ......+.+++.+|++.+|++|||+.++++.|+++
T Consensus 211 ~~~~~~~~--~~~----------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 211 RVEKGYKM--DAP----------DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHhcCCCC--CCC----------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 22221110 100 11234678999999999999999999999999864
No 161
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.2e-37 Score=321.58 Aligned_cols=199 Identities=26% Similarity=0.400 Sum_probs=159.2
Q ss_pred cccCccCceEEEEEEeC---CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN---NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... +++.||+|.+..... ...+.+|++++++++||||+++++++... ...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 46999999999999864 457899999865432 24578899999999999999999998653 45789999995
Q ss_pred CCHHHHhhcCCCc---cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee----cCCCCeEEeecCccc
Q 042348 448 GSLATAIHGKAGI---ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL----GKNMEPHISDFGLAR 520 (686)
Q Consensus 448 gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGla~ 520 (686)
++|.+++...... .....+++..+..++.|++.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 5888887643211 111358899999999999999999999 899999999999999 456789999999998
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
........ ........+|..|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 161 ~~~~~~~~--------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 161 LFNSPLKP--------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCCcc--------------------ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 65322110 011224567888999999876 4589999999999999999999999954
No 162
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1e-36 Score=312.18 Aligned_cols=254 Identities=25% Similarity=0.338 Sum_probs=195.3
Q ss_pred cccCccCceEEEEEEeCC------CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALNN------EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
+.||+|++|.||+|...+ +..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 91 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELM 91 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecC
Confidence 469999999999998753 5678999886543 233456899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCc-cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC---CeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGI-ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM---EPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfGla~~ 521 (686)
++++|.++++..... .....+++..+.+++.||+.||+|||+ ++++||||||+||+++.++ .+||+|||+++.
T Consensus 92 ~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~ 168 (277)
T cd05036 92 AGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARD 168 (277)
T ss_pred CCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEeccCccccc
Confidence 999999999765321 111358999999999999999999999 8999999999999998654 599999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~ 600 (686)
....... ........+..|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 169 ~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~ 227 (277)
T cd05036 169 IYRASYY---------------------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN 227 (277)
T ss_pred cCCccce---------------------ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 5321100 00011122356999999988889999999999999999997 9999954322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
. .....+...... . .. ......+.+++.+|++.+|++||++.+|+++|++
T Consensus 228 ~-----~~~~~~~~~~~~-~--~~---------~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 228 Q-----EVMEFVTGGGRL-D--PP---------KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred H-----HHHHHHHcCCcC-C--CC---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1 112222221111 0 00 1123467899999999999999999999999864
No 163
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-37 Score=333.97 Aligned_cols=256 Identities=17% Similarity=0.189 Sum_probs=189.7
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||++.... ++.||||.... ..+.+|++++++++|+|||++++++...+..++|||++. ++|.
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~ 247 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLY 247 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHH
Confidence 469999999999998764 67899996432 346789999999999999999999999999999999994 7999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..++|.+++.|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 248 ~~l~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~--- 316 (461)
T PHA03211 248 TYLGARL-----RPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST--- 316 (461)
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc---
Confidence 9887543 368999999999999999999999 89999999999999999999999999999865321110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc------chhH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM------ELNI 605 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~------~~~~ 605 (686)
.......||..|+|||++.+..++.++|||||||++|||++|..|+...... ...+
T Consensus 317 ------------------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l 378 (461)
T PHA03211 317 ------------------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQI 378 (461)
T ss_pred ------------------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHH
Confidence 0112346788999999999999999999999999999999988766332211 1112
Q ss_pred HHHHHHHHhhcCCcccccCcccc---------------cCCCcH---HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLA---------------HDLDKE---DEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~---------------~~~~~~---~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...++................+. ...... .....+.+++.+||+.||.+|||+.|++++
T Consensus 379 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 379 LRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 22221110000000000000000 000000 011257789999999999999999999876
No 164
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-36 Score=307.78 Aligned_cols=244 Identities=28% Similarity=0.498 Sum_probs=197.8
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|... ++.||+|.+..... ..+++.+|+.++++++|+||+++++++...+..++||||+++++|.+
T Consensus 12 ~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 89 (256)
T cd05039 12 ATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVD 89 (256)
T ss_pred eeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHH
Confidence 46999999999999876 78899999976543 45789999999999999999999999999899999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++..... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||.++.......
T Consensus 90 ~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~----- 157 (256)
T cd05039 90 YLRSRGR----AVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD----- 157 (256)
T ss_pred HHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccc-----
Confidence 9976542 358999999999999999999999 8999999999999999999999999999975521110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
....+..|+|||++....++.++||||||+++||+++ |+.||...... ++ ...
T Consensus 158 ---------------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~---~~~ 211 (256)
T cd05039 158 ---------------------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DV---VPH 211 (256)
T ss_pred ---------------------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HH---HHH
Confidence 1122446999999988889999999999999999998 99998543221 11 111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
. ...... .. + ......+.+++.+||..+|++||++.|+++.|+++
T Consensus 212 ~-~~~~~~-~~--~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 212 V-EKGYRM-EA--P--------EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred H-hcCCCC-CC--c--------cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 1 111110 00 0 11234678999999999999999999999999864
No 165
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.1e-37 Score=313.71 Aligned_cols=254 Identities=27% Similarity=0.486 Sum_probs=198.1
Q ss_pred hcccCccCceEEEEEEeCC-C---ceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALNN-E---EAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
.+.||+|+||.||+|.... + ..||||.+... ......+|..|+.++++++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFME 88 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCC
Confidence 3569999999999998653 2 36999998764 33345689999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++.+++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 89 NGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred CCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 999999997653 358999999999999999999999 899999999999999999999999999987654322
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
..... ........+..|+|||++.+..++.++|||||||++||+++ |..||..... .+.
T Consensus 161 ~~~~~------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~ 220 (269)
T cd05065 161 SDPTY------------------TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDV 220 (269)
T ss_pred ccccc------------------ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHH
Confidence 11000 00011112456999999998899999999999999999887 9999954322 122
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
..+ +... ...+. ..+.+..+.+++.+||+.+|++||++.+|+..|+++
T Consensus 221 ~~~---i~~~-~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 221 INA---IEQD-YRLPP-----------PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHH---HHcC-CcCCC-----------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 222 2111 11110 012234577899999999999999999999998864
No 166
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7.2e-37 Score=311.92 Aligned_cols=255 Identities=21% Similarity=0.291 Sum_probs=189.8
Q ss_pred ccCccCceEEEEEEeCC---CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALNN---EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||+|+||.||+|...+ +..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 48999999999998653 3578999886543 2334578899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.++++..... .....++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++........
T Consensus 82 L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~- 156 (269)
T cd05087 82 LKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY- 156 (269)
T ss_pred HHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCccee-
Confidence 99999754321 11346778888999999999999999 89999999999999999999999999998643211100
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC-------CCCCcchHHHHHHHHHHHHh-CCCCccccCcc
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-------KPTQKWDIYSYGVILLEMIS-GKLPMIQIGSM 601 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~ 601 (686)
.......++..|+|||++... .++.++|||||||++|||++ |+.||......
T Consensus 157 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 216 (269)
T cd05087 157 --------------------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE 216 (269)
T ss_pred --------------------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH
Confidence 011123456779999987542 35789999999999999996 99999543322
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
+. .. ...... .....++.+... ....+.+++.+|+ .+|++|||+.||+..|+
T Consensus 217 ~~--~~---~~~~~~--~~~~~~~~~~~~-----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 217 QV--LT---YTVREQ--QLKLPKPRLKLP-----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HH--HH---HHhhcc--cCCCCCCccCCC-----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11 11 111111 111122222111 1234677888998 68999999999998875
No 167
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.2e-36 Score=310.43 Aligned_cols=252 Identities=25% Similarity=0.403 Sum_probs=194.4
Q ss_pred ccCccCceEEEEEEeCC-Cc--eEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALNN-EE--AVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+||+|+||.||+|...+ +. .+++|.++... ....+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 58999999999998754 33 57888887532 33446788999999999 8999999999999999999999999999
Q ss_pred CHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCc
Q 042348 449 SLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518 (686)
Q Consensus 449 sL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 518 (686)
+|.+++...... .....+++.++..++.|++.||+|||+ ++++||||||+||++++++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCC
Confidence 999999764311 011358899999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccc
Q 042348 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQ 597 (686)
Q Consensus 519 a~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~ 597 (686)
++...... .......+..|+|||++....++.++|||||||++|||++ |..||..
T Consensus 159 ~~~~~~~~------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~ 214 (270)
T cd05047 159 SRGQEVYV------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 214 (270)
T ss_pred ccccchhh------------------------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 85321100 0001122456999999988889999999999999999997 9999954
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
... .......... .... . . ......+.+++.+||+.+|.+|||+.|+++.|+++-
T Consensus 215 ~~~-----~~~~~~~~~~-~~~~-~-----~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 215 MTC-----AELYEKLPQG-YRLE-K-----P-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred cCH-----HHHHHHHhCC-CCCC-C-----C-----CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 321 1112222111 1100 0 0 012235789999999999999999999999998763
No 168
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-38 Score=324.07 Aligned_cols=244 Identities=23% Similarity=0.369 Sum_probs=201.1
Q ss_pred cCccCceEEEEEEeCCC-ceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHHH
Q 042348 375 LGKSTIGIVYKVALNNE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATA 453 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~ 453 (686)
||.|+||.||||..++. ...|-|.+...+....++|.-||+||+.++||+||++++.|...+..+++.|||.||..+.+
T Consensus 40 LGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDai 119 (1187)
T KOG0579|consen 40 LGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAI 119 (1187)
T ss_pred hcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHH
Confidence 79999999999987653 44567888887777889999999999999999999999999999999999999999999999
Q ss_pred hhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccc
Q 042348 454 IHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHW 533 (686)
Q Consensus 454 l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 533 (686)
+-+-+ +.|++.++.-+++|+++||.|||+ ++|||||||+.|||+.-+|.++|+|||.+......
T Consensus 120 mlEL~-----r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-------- 183 (1187)
T KOG0579|consen 120 MLELG-----RVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-------- 183 (1187)
T ss_pred HHHhc-----cccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhH--------
Confidence 98765 679999999999999999999999 89999999999999999999999999987543211
Q ss_pred cccccCCCCCCCccccccccCCCCCccccCcccc-----cCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 534 EQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-----KVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 534 ~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....+..||++|||||+. ...+|+.++||||||++|.||..+.+|-.....+ ..
T Consensus 184 ---------------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM-----RV 243 (1187)
T KOG0579|consen 184 ---------------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RV 243 (1187)
T ss_pred ---------------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-----HH
Confidence 1223456788899999975 3568999999999999999999999997543332 22
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+-.+....+| .++. +......+.+++.+||.+||..||++.++++|
T Consensus 244 llKiaKSePP--TLlq--------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 244 LLKIAKSEPP--TLLQ--------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHhhcCCC--cccC--------cchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 3333333222 1122 22344578899999999999999999999876
No 169
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.9e-37 Score=313.43 Aligned_cols=254 Identities=22% Similarity=0.379 Sum_probs=197.5
Q ss_pred cccCccCceEEEEEEeCC------CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALNN------EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|...+ +..||+|.+.... ......+.+|+.+++.++||||+++++++......++||||+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 91 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELM 91 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecC
Confidence 469999999999998642 3689999986543 233457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCcc----ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGII----SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
++|+|.+++....... ....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~dfg~~~~ 168 (277)
T cd05032 92 AKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRD 168 (277)
T ss_pred CCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECCcccchh
Confidence 9999999997543211 11347899999999999999999999 8999999999999999999999999999875
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~ 600 (686)
....... .......++..|+|||.+.+..++.++|||||||++||++| |+.||.....
T Consensus 169 ~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 227 (277)
T cd05032 169 IYETDYY---------------------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227 (277)
T ss_pred hccCccc---------------------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH
Confidence 4322110 00112234667999999988889999999999999999998 9999854322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
... ....... .. .... . .....+.+++.+||+.+|++|||+.|+++.|++
T Consensus 228 --~~~---~~~~~~~-~~-~~~~-----~-----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 228 --EEV---LKFVIDG-GH-LDLP-----E-----NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred --HHH---HHHHhcC-CC-CCCC-----C-----CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111 2222211 11 1110 0 123468899999999999999999999998864
No 170
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.9e-37 Score=315.56 Aligned_cols=257 Identities=23% Similarity=0.370 Sum_probs=197.2
Q ss_pred cccCccCceEEEEEEeCC-C--ceEEEEEcCCC-CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALNN-E--EAVAVRRLGNG-GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
.+||+|+||.||+|...+ + ..+++|.++.. .....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 87 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPY 87 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCC
Confidence 469999999999998754 3 34788888743 233446789999999999 799999999999999999999999999
Q ss_pred CCHHHHhhcCCCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecC
Q 042348 448 GSLATAIHGKAGII----------SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 448 gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
|+|.++++...... ....+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||
T Consensus 88 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg 164 (297)
T cd05089 88 GNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFG 164 (297)
T ss_pred CcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeEEECCcC
Confidence 99999997643110 11358899999999999999999999 899999999999999999999999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMI 596 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~ 596 (686)
++....... .......+..|+|||+..+..++.++|||||||++|||++ |..||.
T Consensus 165 ~~~~~~~~~------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~ 220 (297)
T cd05089 165 LSRGEEVYV------------------------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYC 220 (297)
T ss_pred CCcccccee------------------------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 986321100 0001112346999999988889999999999999999998 999995
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
..... +........... ... ......+.+++.+||+.+|.+||++.++++.|+.+....+
T Consensus 221 ~~~~~-----~~~~~~~~~~~~-------~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 221 GMTCA-----ELYEKLPQGYRM-------EKP-----RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred CCCHH-----HHHHHHhcCCCC-------CCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 43221 122222211100 000 1122457899999999999999999999999988775443
No 171
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.5e-36 Score=307.96 Aligned_cols=247 Identities=28% Similarity=0.457 Sum_probs=196.8
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|...+++.||+|.+..... ...++.+|+.++++++|+||+++++++. .+..++||||+++++|.+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 89 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVD 89 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHH
Confidence 46999999999999988889999999875443 3467999999999999999999999874 567899999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++....+ ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.++|+|||++.........
T Consensus 90 ~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~---- 158 (260)
T cd05067 90 FLKTPEG----IKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT---- 158 (260)
T ss_pred HHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc----
Confidence 9876443 458999999999999999999999 89999999999999999999999999998765421110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||++....++.++||||||+++||+++ |+.||...... +....
T Consensus 159 ------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~ 215 (260)
T cd05067 159 ------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQN 215 (260)
T ss_pred ------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----HHHHH
Confidence 0112234567999999988889999999999999999999 99999543221 11222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
.... ... .. . .....++.+++.+||+.+|++||+++++.+.|+.
T Consensus 216 ~~~~-~~~-~~-----~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 216 LERG-YRM-PR-----P-----DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHcC-CCC-CC-----C-----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 2111 111 00 0 1122468899999999999999999999999875
No 172
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.4e-36 Score=312.03 Aligned_cols=247 Identities=22% Similarity=0.364 Sum_probs=195.4
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|.... +..+++|.+........+.+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~ 90 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 90 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHH
Confidence 469999999999998764 6788999987665556678899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
.++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----- 157 (282)
T cd06643 91 AVMLELE-----RPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI----- 157 (282)
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccc-----
Confidence 9887543 468999999999999999999999 899999999999999999999999999987542111
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
.......++..|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 158 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----- 214 (282)
T cd06643 158 ------------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM----- 214 (282)
T ss_pred ------------------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH-----
Confidence 0112234677899999873 345788999999999999999999998543221
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
..+........+ ....+ .....++.+++.+||+.||++||++.+++++-
T Consensus 215 ~~~~~~~~~~~~--~~~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 215 RVLLKIAKSEPP--TLAQP--------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred HHHHHHhhcCCC--CCCCc--------cccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 112222221111 11111 11224678999999999999999999998663
No 173
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=8.6e-37 Score=316.62 Aligned_cols=253 Identities=26% Similarity=0.338 Sum_probs=197.5
Q ss_pred hcccCccCceEEEEEEeC------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVALN------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
.+.||+|+||.||++... .+..||||.++... ....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 119 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEE
Confidence 457999999999999742 24579999987543 23345789999999999 79999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++|+|.++++.... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.++++|||+++...
T Consensus 120 ~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 120 YCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLARDIM 192 (302)
T ss_pred cCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccccccc
Confidence 9999999999976432 248999999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~ 602 (686)
..... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||......+
T Consensus 193 ~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~ 251 (302)
T cd05055 193 NDSNY---------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS 251 (302)
T ss_pred CCCce---------------------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH
Confidence 21100 00112234567999999988889999999999999999998 999985433211
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
. ............ .+ .....++.+++.+||+.+|++||++.|+++.|+++
T Consensus 252 -~----~~~~~~~~~~~~---~~--------~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 252 -K----FYKLIKEGYRMA---QP--------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -H----HHHHHHcCCcCC---CC--------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1 111111111110 00 01123678999999999999999999999999864
No 174
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8.1e-37 Score=316.15 Aligned_cols=261 Identities=23% Similarity=0.340 Sum_probs=197.2
Q ss_pred cccCccCceEEEEEEeCC-----------------CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEe
Q 042348 373 FLLGKSTIGIVYKVALNN-----------------EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 434 (686)
..||+|+||.||+|.... +..||+|.+.... ....+.+.+|++++++++||||+++++++..
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 90 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTV 90 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEec
Confidence 469999999999987643 2458999987643 2345678999999999999999999999999
Q ss_pred cCceeEEEeccCCCCHHHHhhcCCCc-----cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC
Q 042348 435 VDEKLLIYDYIPNGSLATAIHGKAGI-----ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM 509 (686)
Q Consensus 435 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~ 509 (686)
.+..++||||+++++|.+++...... .....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~Nili~~~~ 167 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNCLVGKNY 167 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhceeecCCC
Confidence 99999999999999999999765311 011368999999999999999999999 8999999999999999999
Q ss_pred CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHH
Q 042348 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589 (686)
Q Consensus 510 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ell 589 (686)
.++|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||+
T Consensus 168 ~~~l~dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 226 (296)
T cd05051 168 TIKIADFGMSRNLYSSDYY---------------------RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEIL 226 (296)
T ss_pred ceEEccccceeecccCcce---------------------eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHH
Confidence 9999999998754322110 0111233456799999998888999999999999999999
Q ss_pred h--CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 590 S--GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 590 t--G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
+ |..||..... ......+............... ......++.+++.+||+.||++|||+.||++.|++
T Consensus 227 ~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 227 TLCREQPYEHLTD--QQVIENAGHFFRDDGRQIYLPR--------PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred hcCCCCCCCCcCh--HHHHHHHHhccccccccccCCC--------ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 8 6778743321 1122222111111100000000 01123468899999999999999999999998864
No 175
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.6e-36 Score=309.08 Aligned_cols=251 Identities=28% Similarity=0.498 Sum_probs=197.2
Q ss_pred cccCccCceEEEEEEeC----CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN----NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
+.||+|+||.||+|... .+..+|+|.++... ....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMEN 89 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCC
Confidence 47999999999999864 23479999986543 23346789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
++|.+++.... ..+++.++..++.|++.||+|||+ ++++||||||+||+++.++.++|+|||+++.......
T Consensus 90 ~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 90 GSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 99999997654 358999999999999999999999 8999999999999999999999999999986542211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~ 606 (686)
.. .......++..|+|||++.+..++.++|||||||++||+++ |+.||...... +.
T Consensus 162 ~~--------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~- 218 (267)
T cd05066 162 AA--------------------YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DV- 218 (267)
T ss_pred ee--------------------eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HH-
Confidence 00 00011222456999999998889999999999999999887 99999543221 11
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
...+... ...+. .......+.+++.+|++.+|++||++.++++.|+++
T Consensus 219 --~~~~~~~-~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 219 --IKAIEEG-YRLPA-----------PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --HHHHhCC-CcCCC-----------CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 2222211 11110 011234577999999999999999999999999875
No 176
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-36 Score=316.56 Aligned_cols=259 Identities=25% Similarity=0.388 Sum_probs=198.9
Q ss_pred hcccCccCceEEEEEEeC--------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEE
Q 042348 372 AFLLGKSTIGIVYKVALN--------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLI 441 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 441 (686)
.+.||+|+||.||++... +...+|+|.+.... .....++..|+++++++ +||||+++++++...+..++|
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 102 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 346999999999999753 23469999987542 33446788999999999 799999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCe
Q 042348 442 YDYIPNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~ 511 (686)
|||+++|+|.+++...... .....+++.++++++.|++.||+|||+ ++++||||||+||+++.++.+
T Consensus 103 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~ 179 (307)
T cd05098 103 VEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 179 (307)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEcCCCcE
Confidence 9999999999999764321 011358999999999999999999999 899999999999999999999
Q ss_pred EEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-
Q 042348 512 HISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS- 590 (686)
Q Consensus 512 kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt- 590 (686)
||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++
T Consensus 180 kL~dfg~a~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~ 238 (307)
T cd05098 180 KIADFGLARDIHHIDYY---------------------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 238 (307)
T ss_pred EECCCcccccccccchh---------------------hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcC
Confidence 99999998754321100 00011123456999999988889999999999999999998
Q ss_pred CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 591 GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 591 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
|+.||.... ..+..... ...... +. ......++.+++.+||+.+|++||++.+|++.|+++..
T Consensus 239 g~~p~~~~~-----~~~~~~~~-~~~~~~-~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 239 GGSPYPGVP-----VEELFKLL-KEGHRM-DK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred CCCCCCcCC-----HHHHHHHH-HcCCCC-CC----------CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 888884322 11222222 111111 10 01123467789999999999999999999999999765
Q ss_pred c
Q 042348 671 S 671 (686)
Q Consensus 671 ~ 671 (686)
.
T Consensus 302 ~ 302 (307)
T cd05098 302 L 302 (307)
T ss_pred H
Confidence 4
No 177
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.5e-37 Score=327.81 Aligned_cols=246 Identities=19% Similarity=0.268 Sum_probs=190.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|.+... .......+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg 128 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGG 128 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCC
Confidence 46999999999999876 4788999998642 1223356789999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... .+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+.......
T Consensus 129 ~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~- 197 (370)
T cd05621 129 DLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM- 197 (370)
T ss_pred cHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceecccCCc-
Confidence 999999643 47888999999999999999999 8999999999999999999999999999976532110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCC----CCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR----KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.......||..|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus 198 ---------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~---- 252 (370)
T cd05621 198 ---------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL---- 252 (370)
T ss_pred ---------------------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH----
Confidence 011234678889999998654 378999999999999999999999954322
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK--RPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~~ 664 (686)
......+........ . ... ......+.+++.+|++.++.+ ||++.|++++
T Consensus 253 -~~~~~~i~~~~~~~~-~-----p~~---~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 253 -VGTYSKIMDHKNSLN-F-----PED---VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -HHHHHHHHhCCcccC-C-----CCc---ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 222333332221110 0 000 011234667888888765543 8999999987
No 178
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1e-36 Score=310.61 Aligned_cols=246 Identities=24% Similarity=0.357 Sum_probs=192.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... ++..|++|.+........+.+.+|+.++++++|+||+++++++...+..++||||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 36999999999999865 57789999987766566678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCC--CHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-CCCeEEeecCcccccccccCC
Q 042348 452 TAIHGKAGIISYRPL--SWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l--~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~~~~ 528 (686)
+++.... ..+ ++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.++|+|||++........
T Consensus 94 ~~l~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~- 164 (268)
T cd06624 94 ALLRSKW-----GPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP- 164 (268)
T ss_pred HHHHHhc-----ccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-
Confidence 9998643 234 788899999999999999999 89999999999999986 67999999999875432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC--CCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK--PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
......++..|+|||++.... ++.++||||||+++|+|++|+.||........ .
T Consensus 165 ----------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~ 220 (268)
T cd06624 165 ----------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--A 220 (268)
T ss_pred ----------------------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--h
Confidence 011224567799999986543 78999999999999999999999954322111 1
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+..........++ .....++.+++.+||+.+|++|||+.|++++
T Consensus 221 ~~~~~~~~~~~~~~-------------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 221 MFKVGMFKIHPEIP-------------ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred HhhhhhhccCCCCC-------------cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 11111111111111 1122357789999999999999999999865
No 179
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.9e-36 Score=306.45 Aligned_cols=246 Identities=25% Similarity=0.416 Sum_probs=196.2
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||++...++..+|+|.+..... ...++.+|++++++++||||+++++++......++||||+++++|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 88 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSD 88 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHH
Confidence 46999999999999887788899999875433 34678999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 89 ~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~----- 155 (256)
T cd05112 89 YLRAQR-----GKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY----- 155 (256)
T ss_pred HHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcc-----
Confidence 997654 357899999999999999999999 8999999999999999999999999999875432110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......
T Consensus 156 -----------------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~ 213 (256)
T cd05112 156 -----------------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVET 213 (256)
T ss_pred -----------------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHH
Confidence 00111223457999999988889999999999999999998 9999854321 122222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
....... ..+.. ....+.+++.+||+.+|++||++.|+++.|.
T Consensus 214 ~~~~~~~----~~~~~--------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 214 INAGFRL----YKPRL--------ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HhCCCCC----CCCCC--------CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 2211111 11111 1246889999999999999999999998873
No 180
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.1e-36 Score=316.00 Aligned_cols=257 Identities=25% Similarity=0.385 Sum_probs=196.7
Q ss_pred cccCccCceEEEEEEeC-CCc--eEEEEEcCCC-CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEE--AVAVRRLGNG-GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... ++. .+++|.+... ......++.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 92 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 92 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCC
Confidence 46999999999999865 343 4688877653 233446788999999999 899999999999999999999999999
Q ss_pred CCHHHHhhcCCCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecC
Q 042348 448 GSLATAIHGKAGII----------SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 448 gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
|+|.++++...... ....+++.+++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||
T Consensus 93 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~kl~dfg 169 (303)
T cd05088 93 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 169 (303)
T ss_pred CcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcEEeCccc
Confidence 99999997543110 11358899999999999999999999 899999999999999999999999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMI 596 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~ 596 (686)
+++...... .......+..|+|||++.+..++.++|||||||++|||+| |..||.
T Consensus 170 ~~~~~~~~~------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 225 (303)
T cd05088 170 LSRGQEVYV------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 225 (303)
T ss_pred cCcccchhh------------------------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcc
Confidence 986321100 0011122456999999988889999999999999999998 999995
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
..... +...... ...... .. ......+.+++.+||+.+|++||++.++++.|+++.....
T Consensus 226 ~~~~~-----~~~~~~~-~~~~~~------~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 226 GMTCA-----ELYEKLP-QGYRLE------KP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred cCChH-----HHHHHHh-cCCcCC------CC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 43221 1122111 110000 00 0122357889999999999999999999999998765444
No 181
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.8e-37 Score=329.37 Aligned_cols=268 Identities=19% Similarity=0.277 Sum_probs=191.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++|||||++++++.+.+..++|||||++|
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg 86 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG 86 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCC
Confidence 46999999999999865 57889999986532 223456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.+......
T Consensus 87 ~L~~~l~~~------~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 87 DMMSLLIRM------GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 999999754 357889999999999999999999 89999999999999999999999999998643211100
Q ss_pred ccc----cccc------cccCCCC-----------C---CCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHH
Q 042348 529 PEV----HWEQ------STTGTPL-----------Q---SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVI 584 (686)
Q Consensus 529 ~~~----~~~~------~~~g~~~-----------~---~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvv 584 (686)
... .... ...+.+. . ............+||..|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000 0000 0000000 0 00000011224578999999999998899999999999999
Q ss_pred HHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC---HHHH
Q 042348 585 LLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS---MRHV 661 (686)
Q Consensus 585 l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ev 661 (686)
+|||++|+.||...... +....+......... |. . .....+..+++.+|+ .+|++|++ +.|+
T Consensus 238 l~elltG~~Pf~~~~~~-----~~~~~i~~~~~~~~~---p~---~---~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei 302 (382)
T cd05625 238 LYEMLVGQPPFLAQTPL-----ETQMKVINWQTSLHI---PP---Q---AKLSPEASDLIIKLC-RGPEDRLGKNGADEI 302 (382)
T ss_pred HHHHHhCCCCCCCCCHH-----HHHHHHHccCCCcCC---CC---c---ccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH
Confidence 99999999999543321 112222221111100 00 0 011224556666665 59999987 8887
Q ss_pred HHH
Q 042348 662 CDS 664 (686)
Q Consensus 662 ~~~ 664 (686)
+++
T Consensus 303 ~~h 305 (382)
T cd05625 303 KAH 305 (382)
T ss_pred hcC
Confidence 765
No 182
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=8.9e-37 Score=324.85 Aligned_cols=269 Identities=19% Similarity=0.227 Sum_probs=191.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||||.+.... ......+..|+.++.+++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg 86 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGG 86 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCC
Confidence 46999999999999865 57899999986532 223356788999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 87 DMMTLLMKK------DTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 999999764 358999999999999999999999 89999999999999999999999999999865432111
Q ss_pred ccccccccc------cCCCCC-CCc-----cccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCcc
Q 042348 529 PEVHWEQST------TGTPLQ-SSP-----YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMI 596 (686)
Q Consensus 529 ~~~~~~~~~------~g~~~~-~~~-----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~ 596 (686)
......... ...... ... .........+||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 000000000 000000 000 00001124578999999999998899999999999999999999999995
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccc--cCCCCCCCHHHHHHH
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH--KSPDKRPSMRHVCDS 664 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~--~dP~~RPs~~ev~~~ 664 (686)
..... .....+........ +.+. .. ...++.+++.+++. .++..||++.||+++
T Consensus 238 ~~~~~-----~~~~~i~~~~~~~~--~p~~----~~---~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 238 SETPQ-----ETYKKVMNWKETLI--FPPE----VP---ISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCHH-----HHHHHHHcCcCccc--CCCc----CC---CCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 43321 22222322211110 1110 01 11234455555332 344467999999887
No 183
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.5e-36 Score=314.06 Aligned_cols=261 Identities=23% Similarity=0.341 Sum_probs=195.3
Q ss_pred cccCccCceEEEEEEeC-----------------CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-----------------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 434 (686)
+.||+|+||.||++... +...||+|.+.... .....++.+|++++++++|+||+++++++..
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 90 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCIT 90 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 46999999999998532 23468999987542 2334679999999999999999999999999
Q ss_pred cCceeEEEeccCCCCHHHHhhcCCCcc-----ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC
Q 042348 435 VDEKLLIYDYIPNGSLATAIHGKAGII-----SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM 509 (686)
Q Consensus 435 ~~~~~lV~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~ 509 (686)
.+..++||||+++|+|.+++....... ....+++.++..++.|++.||+|||+ ++++||||||+||+++.++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Nili~~~~ 167 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNCLVGKNY 167 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheEEEcCCC
Confidence 999999999999999999997643211 11357889999999999999999999 8999999999999999999
Q ss_pred CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHH
Q 042348 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589 (686)
Q Consensus 510 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ell 589 (686)
.++|+|||+++.+...... .......++..|+|||...++.++.++|||||||++|||+
T Consensus 168 ~~~l~dfg~~~~~~~~~~~---------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~ 226 (296)
T cd05095 168 TIKIADFGMSRNLYSGDYY---------------------RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEIL 226 (296)
T ss_pred CEEeccCcccccccCCcce---------------------eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHH
Confidence 9999999998754321100 0001122345699999988888999999999999999999
Q ss_pred h--CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 590 S--GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 590 t--G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
+ |..||...... ............... ....+. ...+...+.+++.+||+.||++||++.||++.|++
T Consensus 227 ~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 227 TLCKEQPYSQLSDE--QVIENTGEFFRDQGR--QVYLPK------PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HhCCCCCccccChH--HHHHHHHHHHhhccc--cccCCC------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 8 77888543221 111111111111100 000000 01123568899999999999999999999999874
No 184
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-36 Score=317.91 Aligned_cols=264 Identities=24% Similarity=0.397 Sum_probs=201.3
Q ss_pred hcccCccCceEEEEEEeC--------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEE
Q 042348 372 AFLLGKSTIGIVYKVALN--------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLI 441 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 441 (686)
...||+|+||.||+|... ....+|+|.+.... ......+.+|+++++++ +||||+++++++...+..++|
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 96 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVI 96 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEE
Confidence 457999999999999742 24568999987542 23356788999999999 699999999999998999999
Q ss_pred EeccCCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCe
Q 042348 442 YDYIPNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~ 511 (686)
|||+++|+|.+++...... .....+++.++.+++.|++.||+|||+ ++|+||||||+||+++.++.+
T Consensus 97 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~ 173 (314)
T cd05099 97 VEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVTEDNVM 173 (314)
T ss_pred EecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEcCCCcE
Confidence 9999999999999764311 112458999999999999999999999 899999999999999999999
Q ss_pred EEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-
Q 042348 512 HISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS- 590 (686)
Q Consensus 512 kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt- 590 (686)
||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++
T Consensus 174 kL~Dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~ 232 (314)
T cd05099 174 KIADFGLARGVHDIDYY---------------------KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTL 232 (314)
T ss_pred EEccccccccccccccc---------------------cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhC
Confidence 99999999755321110 00011123356999999988889999999999999999999
Q ss_pred CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 591 GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 591 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
|..||..... .......... ... +. ......++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 233 g~~p~~~~~~-----~~~~~~~~~~-~~~-~~----------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 233 GGSPYPGIPV-----EELFKLLREG-HRM-DK----------PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred CCCCCCCCCH-----HHHHHHHHcC-CCC-CC----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 8889844321 1112222211 111 10 01123367789999999999999999999999999875
Q ss_pred cchhhh
Q 042348 671 STEQQF 676 (686)
Q Consensus 671 ~~~~~~ 676 (686)
.....+
T Consensus 296 ~~~~~~ 301 (314)
T cd05099 296 AVSEEY 301 (314)
T ss_pred HhcCCc
Confidence 544444
No 185
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.3e-36 Score=321.00 Aligned_cols=259 Identities=27% Similarity=0.378 Sum_probs=195.5
Q ss_pred hcccCccCceEEEEEEe------CCCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEec-CceeEEE
Q 042348 372 AFLLGKSTIGIVYKVAL------NNEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSV-DEKLLIY 442 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-~~~~lV~ 442 (686)
.+.||+|+||.||+|.. .+++.||||+++... ......+.+|+.++.++ +||||+++++++... ...++||
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEE
Confidence 45799999999999973 346789999997543 23345788999999999 789999999988754 4578999
Q ss_pred eccCCCCHHHHhhcCCCcc-------------------------------------------------------------
Q 042348 443 DYIPNGSLATAIHGKAGII------------------------------------------------------------- 461 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~------------------------------------------------------------- 461 (686)
||+++|+|.++++......
T Consensus 92 ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (343)
T cd05103 92 EFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDL 171 (343)
T ss_pred eccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhh
Confidence 9999999999997542100
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCC
Q 042348 462 SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTP 541 (686)
Q Consensus 462 ~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~ 541 (686)
....+++..+.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++........
T Consensus 172 ~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------- 235 (343)
T cd05103 172 YKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------------- 235 (343)
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcch-------------
Confidence 01247888999999999999999999 89999999999999999999999999998754321100
Q ss_pred CCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHHHHhhcCCcc
Q 042348 542 LQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMT 620 (686)
Q Consensus 542 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (686)
.......++..|+|||.+.+..++.++||||||+++|||++ |..||....... . .... .......
T Consensus 236 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~---~~~~-~~~~~~~- 301 (343)
T cd05103 236 --------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E---FCRR-LKEGTRM- 301 (343)
T ss_pred --------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-H---HHHH-HhccCCC-
Confidence 00111234556999999988889999999999999999997 999985432211 1 1111 1111110
Q ss_pred cccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 621 DILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 621 ~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.. +. ....++.+++.+||+.+|++|||+.||+++|+.+..
T Consensus 302 ~~--~~--------~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 302 RA--PD--------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CC--CC--------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00 00 012357899999999999999999999999998753
No 186
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.1e-37 Score=328.93 Aligned_cols=268 Identities=20% Similarity=0.292 Sum_probs=196.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++..++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g 86 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGG 86 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCc
Confidence 46999999999999875 57899999986532 223456788999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.+......
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 87 DMMTLLMKK------DTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred HHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 999999764 358999999999999999999999 89999999999999999999999999999865432211
Q ss_pred cccccccc--------ccCCCCCCCc-------cccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCC
Q 042348 529 PEVHWEQS--------TTGTPLQSSP-------YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593 (686)
Q Consensus 529 ~~~~~~~~--------~~g~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~ 593 (686)
........ ....+..... .........+||+.|+|||++....++.++|||||||++|||++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 00000000 0000000000 00001123568999999999998899999999999999999999999
Q ss_pred CccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC---HHHHHHH
Q 042348 594 PMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS---MRHVCDS 664 (686)
Q Consensus 594 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ev~~~ 664 (686)
||...... +....+........ . + ... .....+.+++.+|+. +|.+|++ +.|++++
T Consensus 238 Pf~~~~~~-----~~~~~i~~~~~~~~-~--~---~~~---~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 238 PFCSDNPQ-----ETYRKIINWKETLQ-F--P---DEV---PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCHH-----HHHHHHHcCCCccC-C--C---CCC---CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99543321 12222222211111 0 0 000 112356688888886 9999997 8888775
No 187
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.2e-36 Score=312.95 Aligned_cols=247 Identities=22% Similarity=0.262 Sum_probs=193.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc---chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ---RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||||.+...... ....+.+|+.++++++|+||+++++.+.+.+..++||||++++
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 85 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 85 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCC
Confidence 46999999999999875 5789999998653222 2345778999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++..... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||++.......
T Consensus 86 ~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 86 DLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 99999865432 358999999999999999999999 899999999999999999999999999986543111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 157 ----------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~--~~~ 212 (285)
T cd05630 157 ----------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REE 212 (285)
T ss_pred ----------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch--HHH
Confidence 01123567889999999988899999999999999999999999964322110 011
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~ 664 (686)
........ ... ... .....+.+++.+||+.||++||| +.|++++
T Consensus 213 ~~~~~~~~---~~~----~~~-----~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 213 VERLVKEV---QEE----YSE-----KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred HHhhhhhh---hhh----cCc-----cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 11111110 000 001 12235778999999999999999 8888875
No 188
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.9e-36 Score=305.96 Aligned_cols=248 Identities=29% Similarity=0.484 Sum_probs=198.7
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|..+++..||||.+..... ..+++.+|+.++++++|+||+++++++......++||||+++++|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 90 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLD 90 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHH
Confidence 46999999999999988888899999875433 34679999999999999999999999998899999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++....+ ..+++.++..++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++........
T Consensus 91 ~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~---- 159 (261)
T cd05034 91 FLKSGEG----KKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT---- 159 (261)
T ss_pred HHhcccc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhhh----
Confidence 9986542 458999999999999999999999 89999999999999999999999999998765421100
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||.+.+..++.++|||||||++||+++ |+.||...... .....
T Consensus 160 ------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~ 216 (261)
T cd05034 160 ------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-----EVLEQ 216 (261)
T ss_pred ------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 0011123456999999988889999999999999999999 99999543211 11222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
+.... ... .+ ......+.+++.+|++.+|++||+++++.+.|+.
T Consensus 217 ~~~~~-~~~---~~--------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 217 VERGY-RMP---RP--------PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHcCC-CCC---CC--------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 22111 100 00 0113467899999999999999999999999875
No 189
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-36 Score=320.26 Aligned_cols=260 Identities=25% Similarity=0.381 Sum_probs=200.3
Q ss_pred hcccCccCceEEEEEEeC--------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEE
Q 042348 372 AFLLGKSTIGIVYKVALN--------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLI 441 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 441 (686)
...||+|+||.||+|... .+..||+|.+.... ....+++.+|+++++++ +||||+++++++...+..++|
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 96 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVL 96 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEE
Confidence 457999999999999742 12368999887542 23456789999999999 899999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCe
Q 042348 442 YDYIPNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEP 511 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~ 511 (686)
|||+++|+|.+++...... .....+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+
T Consensus 97 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~~~~~~ 173 (334)
T cd05100 97 VEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVTEDNVM 173 (334)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcE
Confidence 9999999999999764311 112458899999999999999999999 899999999999999999999
Q ss_pred EEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-
Q 042348 512 HISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS- 590 (686)
Q Consensus 512 kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt- 590 (686)
||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++
T Consensus 174 kL~Dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 232 (334)
T cd05100 174 KIADFGLARDVHNIDYY---------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTL 232 (334)
T ss_pred EECCcccceeccccccc---------------------ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhc
Confidence 99999999755321100 00111223456999999998889999999999999999998
Q ss_pred CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 591 GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 591 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
|..||.... ..+....+.... . .+.. .....++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 233 g~~p~~~~~-----~~~~~~~~~~~~-~-~~~~----------~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 233 GGSPYPGIP-----VEELFKLLKEGH-R-MDKP----------ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred CCCCCCCCC-----HHHHHHHHHcCC-C-CCCC----------CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 888885432 222222222211 1 1100 1123467899999999999999999999999999874
Q ss_pred cc
Q 042348 671 ST 672 (686)
Q Consensus 671 ~~ 672 (686)
..
T Consensus 296 ~~ 297 (334)
T cd05100 296 VT 297 (334)
T ss_pred hc
Confidence 33
No 190
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.3e-37 Score=328.44 Aligned_cols=266 Identities=21% Similarity=0.281 Sum_probs=193.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||++... +++.||||.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg 86 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGG 86 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCC
Confidence 46999999999999865 68899999986432 223456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.+......
T Consensus 87 ~L~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 87 DLMTMLIKY------DTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 999999754 358899999999999999999999 89999999999999999999999999999744221110
Q ss_pred ccccccccccCCCCCC--------------------------CccccccccCCCCCccccCcccccCCCCCCcchHHHHH
Q 042348 529 PEVHWEQSTTGTPLQS--------------------------SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYG 582 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~--------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG 582 (686)
.. +.....+..... ...........+||..|+|||++.+..++.++||||||
T Consensus 158 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 158 AY--YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred cc--ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 000000000000 00000011135689999999999988999999999999
Q ss_pred HHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCC---CCHH
Q 042348 583 VILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR---PSMR 659 (686)
Q Consensus 583 vvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~ 659 (686)
|++|||+||+.||...... .....+........ . | .. .....++.+++.+|++ +|.+| +++.
T Consensus 236 vil~elltG~~Pf~~~~~~-----~~~~~i~~~~~~~~-~--p---~~---~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 236 AIMFECLIGWPPFCSENSH-----ETYRKIINWRETLY-F--P---DD---IHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred hhhhhhhcCCCCCCCCCHH-----HHHHHHHccCCccC-C--C---CC---CCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 9999999999999543321 11222222111110 0 0 00 0112356788889997 67665 5999
Q ss_pred HHHHH
Q 042348 660 HVCDS 664 (686)
Q Consensus 660 ev~~~ 664 (686)
|++++
T Consensus 301 ~~l~h 305 (377)
T cd05629 301 EIKSH 305 (377)
T ss_pred HHhcC
Confidence 98887
No 191
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-36 Score=313.99 Aligned_cols=244 Identities=21% Similarity=0.373 Sum_probs=195.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... +++.|++|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHH
Confidence 35999999999999864 67899999987665555677899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 106 ~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~---- 171 (296)
T cd06654 106 DVVTET-------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---- 171 (296)
T ss_pred HHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccccc----
Confidence 998642 47899999999999999999999 8999999999999999999999999999875432110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||.+.+..++.++|||||||++|||++|+.||....... .+..
T Consensus 172 -------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~----~~~~- 227 (296)
T cd06654 172 -------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALYL- 227 (296)
T ss_pred -------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH----hHHH-
Confidence 0112346678999999988888999999999999999999999995433211 1111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+ ..-. .......+.+++.+||+.+|++||++.|++++
T Consensus 228 ~~~~~~~--~~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 228 IATNGTP--ELQN--------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HhcCCCC--CCCC--------ccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 1111111 1000 11123457789999999999999999999875
No 192
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.8e-36 Score=310.91 Aligned_cols=258 Identities=19% Similarity=0.292 Sum_probs=200.1
Q ss_pred hcccCccCceEEEEEEeCC-----CceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEe-cCceeEEEec
Q 042348 372 AFLLGKSTIGIVYKVALNN-----EEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS-VDEKLLIYDY 444 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV~e~ 444 (686)
..+||+|+||.||+|...+ +..|++|++... .....+.+.+|+.++++++||||+++++++.. ....++++||
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~ 90 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPY 90 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEc
Confidence 3579999999999999765 678999988754 23335678899999999999999999998876 4678999999
Q ss_pred cCCCCHHHHhhcCCCc--cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 445 IPNGSLATAIHGKAGI--ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
+++|+|.+++...... .....+++..+..++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++.+
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~ 167 (280)
T cd05043 91 MNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDNALSRDL 167 (280)
T ss_pred CCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCCCCcccc
Confidence 9999999999754311 011358999999999999999999999 89999999999999999999999999999865
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCcc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSM 601 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~ 601 (686)
....... ......++..|+|||++.+..++.++|||||||++||+++ |+.||.....
T Consensus 168 ~~~~~~~---------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~- 225 (280)
T cd05043 168 FPMDYHC---------------------LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP- 225 (280)
T ss_pred cCCceEE---------------------eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-
Confidence 3221100 0011233556999999988889999999999999999999 9999954322
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.++......+ ..... + ......+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 226 ----~~~~~~~~~~-~~~~~---~--------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 226 ----FEMAAYLKDG-YRLAQ---P--------INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred ----HHHHHHHHcC-CCCCC---C--------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1222222111 11110 0 1123467899999999999999999999999998753
No 193
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.3e-37 Score=327.27 Aligned_cols=255 Identities=22% Similarity=0.325 Sum_probs=191.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecC-----ceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD-----EKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lV~e~ 444 (686)
+.||+|+||.||++... +++.||||++... .....+++.+|+++++.++||||+++++++...+ ..++||||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 85 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTEL 85 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeec
Confidence 46999999999999864 6889999998653 2234467889999999999999999999998776 78999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+. ++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~~-~~l~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 86 MQ-SDLHKIIVSP------QPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred cc-cCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 96 5888887654 458999999999999999999999 8999999999999999999999999999975432
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... .......++..|+|||.+.+. .++.++|||||||++|||++|+.||......
T Consensus 156 ~~~----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-- 211 (372)
T cd07853 156 DES----------------------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-- 211 (372)
T ss_pred Ccc----------------------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH--
Confidence 111 011223467789999998764 4799999999999999999999999543321
Q ss_pred hHHHHHHHHHh-------------------hcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILE-------------------DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~-------------------~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+..... ........... .. . .......++.+++.+||+.||++|||+.|++++
T Consensus 212 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 212 QQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPV-LY-T-LSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHH-hc-c-cCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 11111111100 00000000000 00 0 001123467899999999999999999999876
No 194
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.3e-36 Score=304.88 Aligned_cols=248 Identities=28% Similarity=0.399 Sum_probs=196.8
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
.||+|+||.||++...+++.|++|.+...... ....+.+|++++++++|+||+++++++...+..++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 58999999999999877899999998765433 45679999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.... ..+++..+..++.+++.||+|||+ ++++||||||+||+++.++.+||+|||+++.........
T Consensus 82 ~l~~~~-----~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~--- 150 (251)
T cd05041 82 FLRKKK-----NRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV--- 150 (251)
T ss_pred HHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCccee---
Confidence 997643 357899999999999999999999 899999999999999999999999999987543111000
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......+..|+|||.+.+..++.++|||||||++|||+| |..||....... ....
T Consensus 151 ------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-----~~~~ 207 (251)
T cd05041 151 ------------------SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-----TRER 207 (251)
T ss_pred ------------------ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-----HHHH
Confidence 0001122456999999988889999999999999999999 888885433211 1111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
. ....... . .......+.+++.+||+.+|++||++.|+++.|+.
T Consensus 208 ~-~~~~~~~---~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 208 I-ESGYRMP---A--------PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred H-hcCCCCC---C--------CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 1 1111100 0 01123468899999999999999999999998863
No 195
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.1e-36 Score=317.13 Aligned_cols=258 Identities=19% Similarity=0.298 Sum_probs=190.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||+|.++.... .....+.+|++++++++||||+++++++...+..++||||+++ +|
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l 90 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DL 90 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CH
Confidence 36999999999999875 577899999865422 2234678899999999999999999999999999999999975 88
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 ~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 159 (309)
T cd07872 91 KQYMDDCG-----NIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK--- 159 (309)
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCcc---
Confidence 88886543 357899999999999999999999 8999999999999999999999999999875321110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......+|..|+|||.+.+ ..++.++|||||||++|||+||+.||...... +....+
T Consensus 160 --------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~--~~~~~~ 217 (309)
T cd07872 160 --------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE--DELHLI 217 (309)
T ss_pred --------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHH
Confidence 0112345778999998865 56899999999999999999999999544322 111111
Q ss_pred HHHHhhcC--Cccccc------C---cccccCC---CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRK--PMTDIL------D---PFLAHDL---DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~--~~~~~~------d---~~l~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ .++.+. + +...... .......++.+++.+||+.||++|||+.|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 218 FRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred HHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 11111000 000000 0 0000000 000123357799999999999999999999875
No 196
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.7e-36 Score=307.28 Aligned_cols=237 Identities=26% Similarity=0.414 Sum_probs=187.4
Q ss_pred ccCccCceEEEEEEeCCCc-----------eEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEE
Q 042348 374 LLGKSTIGIVYKVALNNEE-----------AVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 442 (686)
.||+|+||.||+|...+.. .|++|.+...... ...+.+|+.++++++||||+++++++.. +..++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 5899999999999876433 5778877654333 5789999999999999999999999988 7789999
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC-------CeEEee
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM-------EPHISD 515 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~-------~~kl~D 515 (686)
||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|
T Consensus 80 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 80 EYVKFGPLDVFLHREK-----NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EcCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCC
Confidence 9999999999998653 258999999999999999999999 8999999999999999887 799999
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC--CCCCcchHHHHHHHHHHHHh-CC
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR--KPTQKWDIYSYGVILLEMIS-GK 592 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwSlGvvl~ellt-G~ 592 (686)
||+++..... ....++..|+|||++.+. .++.++|||||||++|||++ |.
T Consensus 152 fg~a~~~~~~---------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~ 204 (259)
T cd05037 152 PGIPITVLSR---------------------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGE 204 (259)
T ss_pred CCcccccccc---------------------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCC
Confidence 9998754321 012234569999998776 78999999999999999999 57
Q ss_pred CCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 593 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
.||......+ ...+. ....... .+ ....+.+++.+||+.+|++|||+.||++.|+
T Consensus 205 ~p~~~~~~~~--~~~~~----~~~~~~~---~~----------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 205 EPLSTLSSSE--KERFY----QDQHRLP---MP----------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCcccCCchh--HHHHH----hcCCCCC---CC----------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 7774432111 11111 1111100 00 0146789999999999999999999998874
No 197
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.2e-36 Score=310.27 Aligned_cols=253 Identities=25% Similarity=0.392 Sum_probs=195.3
Q ss_pred ccCccCceEEEEEEeCC-------CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNN-------EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
.||+|+||.||+|...+ +..+|+|.+.... ......+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 58999999999998643 2578999886543 234567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCcc-ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC-----CeEEeecCcc
Q 042348 446 PNGSLATAIHGKAGII-SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM-----EPHISDFGLA 519 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~-----~~kl~DfGla 519 (686)
++++|.+++....... ....+++.+++.++.|++.||+|||+ .+++|+||||+||+++.++ .++++|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999997543211 12347899999999999999999999 8999999999999999877 8999999998
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcccc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQI 598 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~ 598 (686)
+........ .......++..|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 159 ~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~ 217 (269)
T cd05044 159 RDIYKSDYY---------------------RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPAL 217 (269)
T ss_pred ccccccccc---------------------ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCccc
Confidence 754322110 00011233567999999998899999999999999999998 99998543
Q ss_pred CccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 599 GSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
.. .+. ...+.... ... ........+.+++.+||+.+|++||++.+|++.|++
T Consensus 218 ~~--~~~---~~~~~~~~-~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 218 NN--QEV---LQHVTAGG-RLQ-----------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CH--HHH---HHHHhcCC-ccC-----------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 22 111 11111111 100 001123467899999999999999999999999864
No 198
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.7e-37 Score=328.84 Aligned_cols=268 Identities=19% Similarity=0.236 Sum_probs=193.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+++.. +++.||||.+.... ......+.+|++++++++||||+++++.+.+.+..++||||+++|
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g 86 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG 86 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 57899999986532 123456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|..+......
T Consensus 87 ~L~~~i~~~------~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 87 DMMSLLIRL------GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 999999764 357888999999999999999999 89999999999999999999999999998643211100
Q ss_pred ccc-----------ccccccc-C-----CCCCCC---ccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHH
Q 042348 529 PEV-----------HWEQSTT-G-----TPLQSS---PYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588 (686)
Q Consensus 529 ~~~-----------~~~~~~~-g-----~~~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~el 588 (686)
... ....... . .+.... ...........||..|+|||++.+..++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 000 0000000 0 000000 0000111245789999999999998999999999999999999
Q ss_pred HhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC---CHHHHHHH
Q 042348 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP---SMRHVCDS 664 (686)
Q Consensus 589 ltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP---s~~ev~~~ 664 (686)
++|+.||......+ ....+....... . .+.. ......+.+++.+|+ .+|.+|+ ++.|++++
T Consensus 238 l~G~~Pf~~~~~~~-----~~~~i~~~~~~~-~--~~~~------~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAE-----TQLKVINWETTL-H--IPSQ------AKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHH-----HHHHHhccCccc-c--CCCC------CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999996543221 112222111110 0 0000 011234556777765 5999999 89999877
No 199
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=323.34 Aligned_cols=266 Identities=24% Similarity=0.387 Sum_probs=209.5
Q ss_pred hcccCccCceEEEEEEeCC--C--ceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALNN--E--EAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
.+.||+|.||.|++|.|.. | ..||||.++..... ...+|.+|+.+|.+|+|||++++||+..+ ....+|||.++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 3569999999999998763 3 46899999876443 67899999999999999999999999987 77899999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
.|||.+.|+.... ..|.......++.|||.|+.||.+ +++|||||..+|+|+-..-.+||+|||+.+.+..++
T Consensus 194 lGSLldrLrka~~----~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 194 LGSLLDRLRKAKK----AILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred cchHHHHHhhccc----cceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999998321 457788899999999999999999 999999999999999998999999999999887665
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
...... ....-.+.|+|||.+....++.++|||+|||++|||+| |..||.+.... .+
T Consensus 267 d~Yvm~--------------------p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--qI 324 (1039)
T KOG0199|consen 267 DMYVMA--------------------PQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--QI 324 (1039)
T ss_pred cceEec--------------------CCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--HH
Confidence 432110 11122456999999999999999999999999999999 88999654332 22
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH--hcccccchhhhhccCCC
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL--DRVNISTEQQFMKGEEP 682 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L--~~i~~~~~~~~~~~~~~ 682 (686)
.+ .+ +.+..+ ...+.|.+.+++++..||..+|++|||+..|.+.+ .+.+.......+...+|
T Consensus 325 L~---~i-D~~erL-----------pRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaqp~~a~~~~d~~ep 388 (1039)
T KOG0199|consen 325 LK---NI-DAGERL-----------PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQPAVARETYDSIEP 388 (1039)
T ss_pred HH---hc-cccccC-----------CCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCCceeeeeccccCC
Confidence 22 21 121111 12345778899999999999999999999998443 33344444444444444
No 200
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2e-36 Score=311.85 Aligned_cols=255 Identities=22% Similarity=0.343 Sum_probs=195.8
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... .+..||+|.+.... ......+.+|+.++++++||||+++++++...+..++||||+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 91 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 91 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCC
Confidence 46999999999998753 24579999886543 223356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCcc----ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGII----SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
++|+|.+++....... .....++..+..++.|++.||+|||+ ++|+||||||+||++++++.++|+|||+++.
T Consensus 92 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L~Dfg~~~~ 168 (288)
T cd05061 92 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 168 (288)
T ss_pred CCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEECcCCcccc
Confidence 9999999997532110 11345778889999999999999999 8999999999999999999999999999875
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~ 600 (686)
....... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 169 ~~~~~~~---------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~ 227 (288)
T cd05061 169 IYETDYY---------------------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 227 (288)
T ss_pred ccccccc---------------------cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 4321110 00011223556999999988889999999999999999999 7888854322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.+........... . . .......+.+++.+||+.||++|||+.++++.|++.
T Consensus 228 -----~~~~~~~~~~~~~--~-----~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 228 -----EQVLKFVMDGGYL--D-----Q-----PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred -----HHHHHHHHcCCCC--C-----C-----CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1222222222111 0 0 011234688999999999999999999999998874
No 201
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2e-37 Score=325.64 Aligned_cols=241 Identities=22% Similarity=0.284 Sum_probs=185.8
Q ss_pred cCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhcc---CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKI---RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
||+|+||.||+|+.. +++.||||++..... .....+..|..++.+. +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 588999999864321 2233455677777665 699999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~------~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~- 150 (330)
T cd05586 81 GELFWHLQKE------GRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN- 150 (330)
T ss_pred ChHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-
Confidence 9999998754 358999999999999999999999 899999999999999999999999999987432111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
.......||..|+|||++.+. .++.++|||||||++|||++|+.||..... .
T Consensus 151 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~ 203 (330)
T cd05586 151 ----------------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----Q 203 (330)
T ss_pred ----------------------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----H
Confidence 011234578889999998754 479999999999999999999999954321 2
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC----HHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS----MRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs----~~ev~~~ 664 (686)
+....+.......+. . .....+.+++.+||+.||++||+ +.|++++
T Consensus 204 ~~~~~i~~~~~~~~~---~---------~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 204 QMYRNIAFGKVRFPK---N---------VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HHHHHHHcCCCCCCC---c---------cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 222333222211110 0 11235678999999999999984 5555553
No 202
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-36 Score=322.94 Aligned_cols=257 Identities=23% Similarity=0.298 Sum_probs=188.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lV~e 443 (686)
..||+|+||.||++... ++..||||.+... .......+.+|+.+++.++||||+++++++...+ ..++|||
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 106 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME 106 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEe
Confidence 46999999999999865 5889999998653 2233567889999999999999999999986543 4699999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++ +|.+.++ ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 107 ~~~~-~l~~~~~--------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 107 LMDA-NLCQVIH--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred CCCc-CHHHHHh--------ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 9965 6766664 247888999999999999999999 899999999999999999999999999987432
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... ......+|..|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 175 ~~~------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~ 230 (359)
T cd07876 175 TNF------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ 230 (359)
T ss_pred cCc------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111 11234567889999999998999999999999999999999999964322110
Q ss_pred -------------hH----HHHHHHHHhhcCCccc-----ccCccccc-C-CCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 042348 604 -------------NI----VQWIQLILEDRKPMTD-----ILDPFLAH-D-LDKEDEIVSVLKIALDCVHKSPDKRPSMR 659 (686)
Q Consensus 604 -------------~~----~~~~~~~~~~~~~~~~-----~~d~~l~~-~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 659 (686)
.. ...+............ ........ . .........+.+++.+||+.||++|||+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~ 310 (359)
T cd07876 231 WNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVD 310 (359)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHH
Confidence 00 0001111111111000 00000000 0 00001234578999999999999999999
Q ss_pred HHHHHH
Q 042348 660 HVCDSL 665 (686)
Q Consensus 660 ev~~~L 665 (686)
|++++-
T Consensus 311 e~l~hp 316 (359)
T cd07876 311 EALRHP 316 (359)
T ss_pred HHhcCc
Confidence 999873
No 203
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.2e-36 Score=310.02 Aligned_cols=243 Identities=23% Similarity=0.354 Sum_probs=191.3
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|.. .+++.||+|.+... .....+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l 86 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSL 86 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCCh
Confidence 4699999999999986 46788999998654 223345788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
..+. .+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.++|+|||++.......
T Consensus 87 ~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~---- 149 (279)
T cd06619 87 DVYR----------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI---- 149 (279)
T ss_pred HHhh----------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc----
Confidence 7542 36788899999999999999999 899999999999999999999999999987543111
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh--HHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN--IVQW 608 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~--~~~~ 608 (686)
.....+|..|+|||++.+..++.++|||||||++|||++|+.||......... ....
T Consensus 150 ---------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 208 (279)
T cd06619 150 ---------------------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL 208 (279)
T ss_pred ---------------------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH
Confidence 11235677899999999888999999999999999999999999543322111 1111
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+....... +.+.. .....++.+++.+||+.+|++||+++|++++
T Consensus 209 ~~~~~~~~~-------~~~~~----~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 209 LQCIVDEDP-------PVLPV----GQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHhccCC-------CCCCC----CcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 121111111 11100 1122357899999999999999999999876
No 204
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-36 Score=309.07 Aligned_cols=248 Identities=24% Similarity=0.338 Sum_probs=194.0
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
...||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 93 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSL 93 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcH
Confidence 346999999999999865 5889999998765544556788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 94 ~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---- 160 (267)
T cd06645 94 QDIYHVT------GPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI---- 160 (267)
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc----
Confidence 9998754 358999999999999999999999 899999999999999999999999999987543111
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.......|+..|+|||++. ...++.++|||||||++|||++|+.||........
T Consensus 161 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~---- 217 (267)
T cd06645 161 -------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA---- 217 (267)
T ss_pred -------------------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh----
Confidence 0112335677899999874 45688999999999999999999999854332111
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+......... . +...... .....+.+++.+||+.+|++||++.+|+++
T Consensus 218 -~~~~~~~~~~-~----~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 218 -LFLMTKSNFQ-P----PKLKDKM---KWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred -HHhhhccCCC-C----CcccccC---CCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 1111111111 0 1010000 112357789999999999999999999864
No 205
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=317.69 Aligned_cols=244 Identities=26% Similarity=0.360 Sum_probs=202.9
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCcc---chHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQ---RFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|.||.||+++.+. |+.+|+|.+.+.... ....+.+|+.+|+++. |||||.+++.|++....++|||+|.|
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~G 120 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEG 120 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCC
Confidence 469999999999999775 899999999765432 3468999999999998 99999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC----CCeEEeecCcccccc
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN----MEPHISDFGLARLAD 523 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~~~~ 523 (686)
|.|.+.+... .+++.++..++.|++.|++|||+ .+|+||||||+|+|+... +.+|++|||+|....
T Consensus 121 GeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 121 GELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred chHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999765 28999999999999999999999 899999999999999633 579999999998765
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.. ......+||+.|+|||++....|+..+||||+||++|.|++|..||........
T Consensus 191 ~~------------------------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~ 246 (382)
T KOG0032|consen 191 PG------------------------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI 246 (382)
T ss_pred CC------------------------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH
Confidence 41 123456889999999999999999999999999999999999999966543332
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+...... ..++. .+.......+++.+|+..||.+|+|+.++++|
T Consensus 247 -----~~~i~~~~~~---f~~~~------w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 247 -----FLAILRGDFD---FTSEP------WDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -----HHHHHcCCCC---CCCCC------ccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1233333321 11111 12234567789999999999999999999997
No 206
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.7e-36 Score=318.12 Aligned_cols=262 Identities=21% Similarity=0.272 Sum_probs=191.8
Q ss_pred cccCcc--CceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKS--TIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
.+||+| +|++||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 368999 78999999865 68899999987542 22235677899999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++..... ..+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.++++||+.+........
T Consensus 84 ~~l~~~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 84 GSAKDLICTHFM----DGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CcHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999975432 358999999999999999999999 8999999999999999999999999987643321110
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
.. .... .......++..|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 157 ~~-----~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-- 218 (327)
T cd08227 157 RL-----RVVH-----------DFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-- 218 (327)
T ss_pred cc-----cccc-----------cccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--
Confidence 00 0000 00112345667999999875 4589999999999999999999999954322111
Q ss_pred HHHHHHHHhhcCCccccc-------------------Cccccc----------------CCCcHHHHHHHHHHHHhcccc
Q 042348 606 VQWIQLILEDRKPMTDIL-------------------DPFLAH----------------DLDKEDEIVSVLKIALDCVHK 650 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~-------------------d~~l~~----------------~~~~~~~~~~l~~l~~~cl~~ 650 (686)
........ ..... +..... ..........+.+++.+||+.
T Consensus 219 ---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 293 (327)
T cd08227 219 ---LLEKLNGT--VPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQR 293 (327)
T ss_pred ---HHHHhcCC--ccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhh
Confidence 11111100 00000 000000 000111234688999999999
Q ss_pred CCCCCCCHHHHHHH
Q 042348 651 SPDKRPSMRHVCDS 664 (686)
Q Consensus 651 dP~~RPs~~ev~~~ 664 (686)
||++|||++|++++
T Consensus 294 dP~~Rpt~~ell~~ 307 (327)
T cd08227 294 NPDARPSASTLLNH 307 (327)
T ss_pred CchhcCCHHHHhcC
Confidence 99999999999875
No 207
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.5e-36 Score=308.14 Aligned_cols=251 Identities=22% Similarity=0.335 Sum_probs=196.4
Q ss_pred hcccCccCceEEEEEEeCC----CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALNN----EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
...||+|+||.||+|...+ ...|+||...... ....+.+.+|+.++++++||||+++++++.+ +..++||||++
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~ 89 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAP 89 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCC
Confidence 3479999999999998643 2468999887654 3445679999999999999999999999875 56789999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 90 LGELRSYLQVNK-----YSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred CCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 999999997643 358999999999999999999999 899999999999999999999999999987654221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. ......++..|+|||.+....++.++|||||||++||+++ |+.||......+ .
T Consensus 162 ~~----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~ 217 (270)
T cd05056 162 YY----------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--V 217 (270)
T ss_pred ce----------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--H
Confidence 00 0011123456999999988889999999999999999996 999995443221 1
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
....... .... . .......+.+++.+|+..+|++|||+.++++.|+++..
T Consensus 218 ---~~~~~~~-~~~~------~-----~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 218 ---IGRIENG-ERLP------M-----PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred ---HHHHHcC-CcCC------C-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111111 1110 0 01123467889999999999999999999999998764
No 208
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.5e-36 Score=310.39 Aligned_cols=258 Identities=26% Similarity=0.379 Sum_probs=199.4
Q ss_pred cccCccCceEEEEEEeC-----CCceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEe--cCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-----NEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWS--VDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lV~e~ 444 (686)
..||+|+||.||+|.+. ++..||||.+...... ..+.|.+|++++++++||||+++++++.. ....++||||
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 89 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEY 89 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEec
Confidence 46999999999999864 3678999999765433 45789999999999999999999999887 5578999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++++|.+++.... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.++|+|||++.....
T Consensus 90 ~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 90 LPSGSLRDYLQRHR-----DQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred CCCCCHHHHHHhCc-----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 99999999998654 358999999999999999999999 8999999999999999999999999999986542
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
..... .......++..|+|||...+..++.++||||||+++|||+||+.|+.........
T Consensus 162 ~~~~~--------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~ 221 (284)
T cd05038 162 DKDYY--------------------YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR 221 (284)
T ss_pred CCcce--------------------eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc
Confidence 21100 0011123345699999998888999999999999999999999998543221110
Q ss_pred ---------HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 605 ---------IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 605 ---------~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
................ ....+..++.+++.+||+.+|++|||+.||++.|+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 222 MIGIAQGQMIVTRLLELLKEGERLP-----------RPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred ccccccccccHHHHHHHHHcCCcCC-----------CCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 0111111111111100 01122356889999999999999999999999999863
No 209
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.9e-36 Score=307.25 Aligned_cols=247 Identities=27% Similarity=0.486 Sum_probs=196.4
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
+.||+|+||.||++...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.. ...+++|||+++|+|.+
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~ 89 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLD 89 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHH
Confidence 4699999999999998878889999887543 234678999999999999999999999887 77899999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++....+ ..+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||.+.........
T Consensus 90 ~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~---- 158 (260)
T cd05073 90 FLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT---- 158 (260)
T ss_pred HHHhCCc----cccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc----
Confidence 9976532 357899999999999999999999 89999999999999999999999999998754321110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||++....++.++|||||||++|+++| |+.||...... .... .
T Consensus 159 ------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~---~ 215 (260)
T cd05073 159 ------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIR---A 215 (260)
T ss_pred ------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHH---H
Confidence 0111234566999999988889999999999999999999 99998543221 1111 1
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
. ....... . ......++.+++.+|++.+|++||++.++.+.|+.
T Consensus 216 ~-~~~~~~~-~----------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 216 L-ERGYRMP-R----------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred H-hCCCCCC-C----------cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1 1111110 0 01123468899999999999999999999999975
No 210
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.9e-36 Score=312.02 Aligned_cols=254 Identities=28% Similarity=0.424 Sum_probs=196.6
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... ++..||+|.+..... ...+++.+|+.++++++||||+++++++...+..++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYM 90 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecC
Confidence 35899999999999863 467899999875432 33467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCc----------------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC
Q 042348 446 PNGSLATAIHGKAGI----------------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM 509 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~----------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~ 509 (686)
++|+|.+++...... .....+++.+++.++.|++.||+|||+ ++++||||||+||++++++
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~nil~~~~~ 167 (288)
T cd05050 91 AYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRNCLVGENM 167 (288)
T ss_pred CCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhheEecCCC
Confidence 999999999753211 011357889999999999999999999 8999999999999999999
Q ss_pred CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHH
Q 042348 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589 (686)
Q Consensus 510 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ell 589 (686)
.++|+|||+++........ ........+..|+|||.+.+..++.++|||||||++|||+
T Consensus 168 ~~~l~dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 226 (288)
T cd05050 168 VVKIADFGLSRNIYSADYY---------------------KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 226 (288)
T ss_pred ceEECccccceecccCccc---------------------cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHH
Confidence 9999999998754321100 0011122345699999998888999999999999999999
Q ss_pred h-CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 590 S-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 590 t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
+ |..||..... .+....+..... ... ......++.+++.+||+.+|++|||+.|+++.|++
T Consensus 227 ~~~~~p~~~~~~-----~~~~~~~~~~~~--~~~----------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 227 SYGMQPYYGMAH-----EEVIYYVRDGNV--LSC----------PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred hCCCCCCCCCCH-----HHHHHHHhcCCC--CCC----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 8 8888854322 222222222211 000 01123468899999999999999999999999874
No 211
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.3e-37 Score=322.27 Aligned_cols=256 Identities=21% Similarity=0.297 Sum_probs=197.5
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC-C-----CCcceeeEEEEecCceeEEEec
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-H-----PNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
.++||+|.||.|.||... +++.||||+++... .-..+...|+.+|..++ | -|+|+++++|...++.+||+|.
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfEL 269 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFEL 269 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehh
Confidence 457999999999999855 58999999998753 23466788999999996 4 3899999999999999999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC--CCeEEeecCccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN--MEPHISDFGLARLA 522 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~--~~~kl~DfGla~~~ 522 (686)
+. .+|.++++.+.- ..++...+..|+.||+.||.+||+ .+|||+||||+||||.+- ..+||+|||.|.+.
T Consensus 270 L~-~NLYellK~n~f----~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 270 LS-TNLYELLKNNKF----RGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred hh-hhHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 94 599999997753 679999999999999999999999 899999999999999743 37999999999865
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
... ......+.+|+|||++.+.+|+.+.||||||||+.||++|.+-|.+. .+
T Consensus 342 ~q~--------------------------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~--ne 393 (586)
T KOG0667|consen 342 SQR--------------------------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD--NE 393 (586)
T ss_pred CCc--------------------------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC--CH
Confidence 422 12445677899999999999999999999999999999998777443 33
Q ss_pred hhHHHHHHHHHhh--------cCCcccccCc---------------------------------ccccCCC------cHH
Q 042348 603 LNIVQWIQLILED--------RKPMTDILDP---------------------------------FLAHDLD------KED 635 (686)
Q Consensus 603 ~~~~~~~~~~~~~--------~~~~~~~~d~---------------------------------~l~~~~~------~~~ 635 (686)
.+....+..++.- .......++. ....... ...
T Consensus 394 ~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~ 473 (586)
T KOG0667|consen 394 YDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKA 473 (586)
T ss_pred HHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccc
Confidence 3333333333221 0000000110 0000000 012
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 636 EIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 636 ~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.-..+++++.+||+.||.+|+|..|+++|
T Consensus 474 ~~~~F~dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 474 DDKLFIDFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred cHHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 33458899999999999999999999987
No 212
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.3e-36 Score=307.07 Aligned_cols=255 Identities=20% Similarity=0.316 Sum_probs=187.3
Q ss_pred ccCccCceEEEEEEeCC---CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALNN---EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||+|+||.||+|...+ ...+++|.+.... ......+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 48999999999997543 3468888876442 2334568899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++....... ....++.....++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++........
T Consensus 82 L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~- 156 (269)
T cd05042 82 LKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY- 156 (269)
T ss_pred HHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhe-
Confidence 999997654211 1235678889999999999999999 89999999999999999999999999998643221100
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCccccc-------CCCCCCcchHHHHHHHHHHHHh-CCCCccccCcc
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-------VRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSM 601 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~ 601 (686)
.......++..|+|||+.. ...++.++|||||||++|||++ |..||......
T Consensus 157 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~ 216 (269)
T cd05042 157 --------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE 216 (269)
T ss_pred --------------------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH
Confidence 0011223456699999864 2356889999999999999999 78888543221
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
+ .......... ....++.+.. .....+.+++..|+ .||++|||++||++.|.
T Consensus 217 ~-----~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 217 Q-----VLKQVVREQD--IKLPKPQLDL-----KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred H-----HHHHHhhccC--ccCCCCcccc-----cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1 1112121111 1111222211 12234567778888 59999999999998873
No 213
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-36 Score=326.10 Aligned_cols=256 Identities=19% Similarity=0.240 Sum_probs=190.4
Q ss_pred cccCccCceEEEEEEeC---CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN---NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||++... .+..||+|.+... +.+.+|++++++++|||||++++++...+..++||||+. ++
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 171 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CD 171 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CC
Confidence 46999999999999754 3568999988653 345689999999999999999999999999999999995 68
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++.+++.|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 172 l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~- 241 (392)
T PHA03207 172 LFTYVDRS------GPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT- 241 (392)
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccccc-
Confidence 98888433 468999999999999999999999 89999999999999999999999999999755422110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc--hhHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME--LNIVQ 607 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~--~~~~~ 607 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||....... ..+..
T Consensus 242 --------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~ 301 (392)
T PHA03207 242 --------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRS 301 (392)
T ss_pred --------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHH
Confidence 01123467889999999998899999999999999999999999995543221 11111
Q ss_pred HHHHHHhhcCCcccc---------------cCccc--ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDI---------------LDPFL--AHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~---------------~d~~l--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+............. ..+.. ............+.+++.+||..||++|||+.|++.+
T Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 302 IIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111100000000000 00000 0000000112356788999999999999999999887
No 214
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=9.1e-37 Score=331.56 Aligned_cols=256 Identities=21% Similarity=0.310 Sum_probs=184.1
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEec--------CceeEEE
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--------DEKLLIY 442 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------~~~~lV~ 442 (686)
...||+|+||.||+|... +++.||||++.... ....+|+.++++++|||||++++++... ...++||
T Consensus 71 ~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 71 GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 347999999999999875 57899999885432 2345799999999999999999987542 1356899
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC-CeEEeecCcccc
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM-EPHISDFGLARL 521 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~ 521 (686)
||+++ +|.+++..... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+|+.
T Consensus 147 E~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 147 EFIPQ-TVHKYMKHYAR--NNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred ecCCc-cHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 99975 77777653211 11468999999999999999999999 8999999999999999665 699999999985
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
+..... .....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 221 ~~~~~~------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~ 276 (440)
T PTZ00036 221 LLAGQR------------------------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS 276 (440)
T ss_pred ccCCCC------------------------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 532211 112456778999998865 4689999999999999999999999965432
Q ss_pred cchhHHHHHHHHHhhc---------C-----CcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDR---------K-----PMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~---------~-----~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+ .+...++ ..... . ..+......+.... +.....++.+++.+||++||.+|||+.|++++
T Consensus 277 ~~-~~~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 277 VD-QLVRIIQ-VLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVF-PKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HH-HHHHHHH-HhCCCCHHHHHHhchhhhcccCCccCchhHHHHh-ccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 21 1111111 11000 0 00000000000000 00123468899999999999999999999866
No 215
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.7e-36 Score=309.77 Aligned_cols=246 Identities=21% Similarity=0.346 Sum_probs=194.3
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|.... +..|++|.+........+.+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 97 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVD 97 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHH
Confidence 369999999999998764 7899999997766566678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
.++.... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~----- 164 (292)
T cd06644 98 AIMLELD-----RGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL----- 164 (292)
T ss_pred HHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccc-----
Confidence 8886543 358999999999999999999999 899999999999999999999999999886432110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
.......++..|+|||++. ...++.++|||||||++|||++|+.||..... .
T Consensus 165 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~ 221 (292)
T cd06644 165 ------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----M 221 (292)
T ss_pred ------------------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----H
Confidence 0011234567799999874 34578899999999999999999999854322 1
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+........+ .... ......++.+++.+||+.+|++||++.|++++
T Consensus 222 ~~~~~~~~~~~~--~~~~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 222 RVLLKIAKSEPP--TLSQ--------PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred HHHHHHhcCCCc--cCCC--------CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 112222211111 1100 11123457889999999999999999999875
No 216
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.4e-36 Score=305.88 Aligned_cols=254 Identities=19% Similarity=0.307 Sum_probs=187.8
Q ss_pred ccCccCceEEEEEEeCCC---ceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALNNE---EAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||+|+||.||++...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 489999999999975433 346677765432 2345689999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.++++..... ....++..+..++.||+.||+|||+ .+++||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~-- 154 (268)
T cd05086 82 LKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY-- 154 (268)
T ss_pred HHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchh--
Confidence 99999864321 1346777888999999999999999 8999999999999999999999999998863221100
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccC-------CCCCCcchHHHHHHHHHHHHh-CCCCccccCcc
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-------RKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSM 601 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~ 601 (686)
........++..|+|||++.. ..++.++|||||||++|||++ |..||.....
T Consensus 155 -------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~- 214 (268)
T cd05086 155 -------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD- 214 (268)
T ss_pred -------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 001122345677999998743 245789999999999999997 5667743322
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
.+.+.....+. .....++.+.... ...+.+++..|| .+|++||+++||++.|.
T Consensus 215 ----~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 215 ----REVLNHVIKDQ--QVKLFKPQLELPY-----SERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ----HHHHHHHHhhc--ccccCCCccCCCC-----cHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 12222222221 1223333332222 235667888899 67999999999998874
No 217
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.1e-36 Score=306.52 Aligned_cols=251 Identities=24% Similarity=0.371 Sum_probs=195.4
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCc------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|...+++.+|+|.+..... .....+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVP 85 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCC
Confidence 46999999999999988889999998864321 123568899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+++|.+++... ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.++|+|||+++......
T Consensus 86 ~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 86 GGSISSILNRF------GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred CCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 99999999754 357899999999999999999999 899999999999999999999999999987543211
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
..... ........++..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 157 ~~~~~-----------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---- 215 (265)
T cd06631 157 LHGTH-----------------SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA---- 215 (265)
T ss_pred ccccc-----------------cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH----
Confidence 10000 001123457788999999998889999999999999999999999995432111
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.............. +.. .....+.+++.+||+.+|++||++.|++++
T Consensus 216 -~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 216 -AMFYIGAHRGLMPR-----LPD-----SFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred -HHHHhhhccCCCCC-----CCC-----CCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11111111111111 111 123457889999999999999999999753
No 218
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.1e-36 Score=340.73 Aligned_cols=274 Identities=23% Similarity=0.253 Sum_probs=199.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGG 87 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGY 87 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCC
Confidence 46999999999999875 58899999986532 122457899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCc-----cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 449 SLATAIHGKAGI-----ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 449 sL~~~l~~~~~~-----~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
+|.+++...... .....+++..+++++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 88 SL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~ 164 (932)
T PRK13184 88 TLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKK 164 (932)
T ss_pred CHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecCcceecc
Confidence 999998642110 001346778889999999999999999 899999999999999999999999999998763
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
........ ......+. ...........+||..|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 165 ~~~~~~~~-l~~~~~~s----~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 165 LEEEDLLD-IDVDERNI----CYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred cccccccc-cccccccc----cccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 21110000 00000000 00001122345789999999999998999999999999999999999999954322111
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHhccc
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-SMRHVCDSLDRVN 669 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ev~~~L~~i~ 669 (686)
. . ......+....+ .......+.+++.+|++.||++|| +++++.+.|+...
T Consensus 240 ~-----~---~~~i~~P~~~~p-------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 240 S-----Y---RDVILSPIEVAP-------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred h-----h---hhhccChhhccc-------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0 0 000000000000 011234577899999999999995 6777888887753
No 219
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2e-36 Score=322.28 Aligned_cols=248 Identities=19% Similarity=0.269 Sum_probs=190.8
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
...||+|+||.||++... +++.||+|.+... .......+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~g 127 (371)
T cd05622 48 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 127 (371)
T ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 346999999999999876 5788999998542 122335578899999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 128 g~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 128 GDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred CcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence 9999998643 47888899999999999999999 8999999999999999999999999999976532110
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCC----CCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR----KPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.......||..|+|||++... .++.++|||||||++|||++|+.||....
T Consensus 198 ----------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~---- 251 (371)
T cd05622 198 ----------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS---- 251 (371)
T ss_pred ----------------------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC----
Confidence 011234678889999998653 37899999999999999999999995432
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK--RPSMRHVCDSL 665 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~~L 665 (686)
.......+....... ...+. ......+.+++.+|+..++.+ ||++.|++++.
T Consensus 252 -~~~~~~~i~~~~~~~-~~~~~--------~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 252 -LVGTYSKIMNHKNSL-TFPDD--------NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred -HHHHHHHHHcCCCcc-cCCCc--------CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 122233333322111 11000 112235678889999844433 78999998875
No 220
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5e-36 Score=304.58 Aligned_cols=248 Identities=21% Similarity=0.328 Sum_probs=194.3
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCC-----ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-----WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
...||+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 86 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYM 86 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEEC
Confidence 347999999999999864 58899999876432 122356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+++.....
T Consensus 87 ~~~~l~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 87 PGGSVKDQLKAY------GALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred CCCcHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 999999998754 358889999999999999999999 89999999999999999999999999998754321
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
.... .......++..|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus 158 ~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---- 213 (263)
T cd06625 158 CSSG--------------------TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM---- 213 (263)
T ss_pred cccc--------------------ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----
Confidence 1000 0001234566799999999888999999999999999999999999543221
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
............ +.+. ......+.+++.+||..+|++|||+.|++++
T Consensus 214 -~~~~~~~~~~~~------~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 214 -AAIFKIATQPTN------PQLP-----SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -HHHHHHhccCCC------CCCC-----ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 111111111110 0011 1122357789999999999999999999875
No 221
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.3e-36 Score=313.59 Aligned_cols=243 Identities=20% Similarity=0.331 Sum_probs=194.3
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
.||+|+||.||++... ++..||||.+........+.+.+|+.++++++||||+++++.+...+..++||||+++++|.+
T Consensus 29 ~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (292)
T cd06658 29 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTD 108 (292)
T ss_pred cccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHH
Confidence 5899999999999865 578999999876555556778999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.. ..+++.++..++.||+.||+|||+ ++|+||||||+||++++++.++|+|||++........
T Consensus 109 ~~~~-------~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~----- 173 (292)
T cd06658 109 IVTH-------TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP----- 173 (292)
T ss_pred HHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-----
Confidence 8854 247899999999999999999999 8999999999999999999999999999875431110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLI 612 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 612 (686)
......++..|+|||...+..++.++|||||||++|||++|+.||...... ..+...
T Consensus 174 ------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----~~~~~~ 230 (292)
T cd06658 174 ------------------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-----QAMRRI 230 (292)
T ss_pred ------------------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH
Confidence 011234677899999998888999999999999999999999999543221 111111
Q ss_pred HhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 613 LEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 613 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.... . +.... .......+.+++.+||+.||++|||+.|++++
T Consensus 231 ~~~~---~----~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 231 RDNL---P----PRVKD---SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HhcC---C----Ccccc---ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1111 1 10100 01122357788999999999999999999976
No 222
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.8e-36 Score=309.48 Aligned_cols=245 Identities=24% Similarity=0.384 Sum_probs=189.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEec------CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSV------DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~------~~~~lV~e~ 444 (686)
..||+|+||.||+|... +++.||+|.+.... .....+..|+.++.++ +||||+++++++... ...++||||
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 90 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 90 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEc
Confidence 46999999999999865 57889999986543 3346788999999999 799999999998753 357899999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++|+|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.++|+|||+++....
T Consensus 91 ~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 91 CGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 163 (272)
T ss_pred CCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCceeccc
Confidence 999999999986432 458999999999999999999999 8999999999999999999999999999875432
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
... ......|+..|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~-----------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~ 220 (272)
T cd06637 164 TVG-----------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 220 (272)
T ss_pred ccc-----------------------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 110 112334677899999885 3457889999999999999999999995432
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
... ... .... .......+. .....+.+++.+||..+|++|||+.|++++
T Consensus 221 ~~~----~~~-~~~~--~~~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 221 PMR----ALF-LIPR--NPAPRLKSK---------KWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HHH----HHH-HHhc--CCCCCCCCC---------CcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 211 111 1111 111111111 122357899999999999999999999864
No 223
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.8e-36 Score=310.86 Aligned_cols=244 Identities=21% Similarity=0.398 Sum_probs=195.7
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||.|++|.||+|.. .+++.|++|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT 104 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHH
Confidence 3599999999999985 468899999987655555678899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.. ..+++.++..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++........
T Consensus 105 ~~~~~-------~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~---- 170 (296)
T cd06655 105 DVVTE-------TCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS---- 170 (296)
T ss_pred HHHHh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc----
Confidence 99864 348999999999999999999999 8999999999999999999999999999875432211
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||....... ....
T Consensus 171 -------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-----~~~~ 226 (296)
T cd06655 171 -------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-----ALYL 226 (296)
T ss_pred -------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHH
Confidence 0112345678999999988889999999999999999999999995433211 1111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+ ....+ ......+.+++.+||+.||++||++.+++.+
T Consensus 227 ~~~~~~~--~~~~~--------~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 227 IATNGTP--ELQNP--------EKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHhcCCc--ccCCc--------ccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 1111111 00000 1122357789999999999999999999865
No 224
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.5e-36 Score=305.39 Aligned_cols=244 Identities=25% Similarity=0.407 Sum_probs=195.3
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|...+ +..+++|.+..... .+++.+|++++++++||||+++++++...+..++++||+++++|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 86 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVS 86 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHH
Confidence 369999999999999875 78999999865432 578999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||++........
T Consensus 87 ~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~---- 154 (256)
T cd06612 87 DIMKITN-----KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA---- 154 (256)
T ss_pred HHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCcc----
Confidence 9997543 468999999999999999999999 8999999999999999999999999999876532210
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||++.+..++.++|||||||++|+|++|+.||........ ...
T Consensus 155 -------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-----~~~ 210 (256)
T cd06612 155 -------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-----IFM 210 (256)
T ss_pred -------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-----hhh
Confidence 01123356679999999888899999999999999999999999954322111 111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.... . . +.+. ........+.+++.+||+.||++|||+.||+++
T Consensus 211 ~~~~--~-~----~~~~---~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 211 IPNK--P-P----PTLS---DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred hccC--C-C----CCCC---chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 0000 0 0 0000 011123467889999999999999999999863
No 225
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6e-36 Score=303.72 Aligned_cols=248 Identities=27% Similarity=0.407 Sum_probs=197.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... +++.+++|.+........+.+.+|++++++++||||+++++++...+..+++|||+++++|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~ 88 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQ 88 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHH
Confidence 36899999999999875 46789999987665556678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..+++.++..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||++........
T Consensus 89 ~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---- 156 (262)
T cd06613 89 DIYQVTR-----GPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA---- 156 (262)
T ss_pred HHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhh----
Confidence 9987653 358899999999999999999999 8999999999999999999999999999875432110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCC---CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR---KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+... .++.++|||||||++|||+||+.||........
T Consensus 157 -------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~----- 212 (262)
T cd06613 157 -------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA----- 212 (262)
T ss_pred -------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-----
Confidence 11123456779999998776 789999999999999999999999954332211
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
............. +. .......++.+++.+||+.+|++|||+.+|+.+
T Consensus 213 ~~~~~~~~~~~~~-----~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 213 LFLISKSNFPPPK-----LK---DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHHHhccCCCcc-----cc---chhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111111101000 00 112234568899999999999999999999753
No 226
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.3e-36 Score=304.44 Aligned_cols=245 Identities=23% Similarity=0.342 Sum_probs=195.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||++... ++..+|+|.++.. .....+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 85 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDL 85 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcH
Confidence 46999999999999865 5788999988543 233456788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++....+ ..+++..++.++.|++.||+|||+ ++|+|+||||+||++++++.++++|||.++.......
T Consensus 86 ~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--- 155 (255)
T cd08219 86 MQKIKLQRG----KLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA--- 155 (255)
T ss_pred HHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccccc---
Confidence 999875432 457899999999999999999999 8999999999999999999999999999875532110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......++..|+|||++.+..++.++||||||+++|+|++|+.||..... .....
T Consensus 156 --------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~ 210 (255)
T cd08219 156 --------------------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLIL 210 (255)
T ss_pred --------------------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHH
Confidence 01123466779999999888899999999999999999999999954321 12222
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ . +. ......+.+++.+||+.||++||++.+++..
T Consensus 211 ~~~~~~~~--~-~~---------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 211 KVCQGSYK--P-LP---------SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHhcCCCC--C-CC---------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 22222111 0 00 0122357789999999999999999999764
No 227
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.5e-36 Score=308.64 Aligned_cols=254 Identities=24% Similarity=0.354 Sum_probs=200.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||+|+||+||++... ++..||+|.+.... ....+.+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSL 90 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCH
Confidence 46999999999999865 57889999876532 23356789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++..+..++.+++.||.|||+. .+++||||||+||++++++.++|+|||++.......
T Consensus 91 ~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~---- 158 (284)
T cd06620 91 DRIYKKG------GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI---- 158 (284)
T ss_pred HHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc----
Confidence 9998764 3589999999999999999999962 479999999999999999999999999986432110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc------hh
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME------LN 604 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~------~~ 604 (686)
.....++..|+|||++.+..++.++|||||||++||++||+.||......+ ..
T Consensus 159 ---------------------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~ 217 (284)
T cd06620 159 ---------------------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMG 217 (284)
T ss_pred ---------------------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhH
Confidence 012356778999999988889999999999999999999999996543211 11
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+..++........+ .+ ........+.+++.+|++.||++|||+.|++++..-++.
T Consensus 218 ~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 218 ILDLLQQIVQEPPP-------RL----PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HHHHHHHHhhccCC-------CC----CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 22333333222111 00 011133467899999999999999999999988655443
No 228
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-36 Score=312.44 Aligned_cols=244 Identities=21% Similarity=0.383 Sum_probs=195.1
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 104 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHH
Confidence 4699999999999986 468899999997655555677899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++... .+++.++..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++........
T Consensus 105 ~~~~~~-------~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~---- 170 (297)
T cd06656 105 DVVTET-------CMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---- 170 (297)
T ss_pred HHHHhC-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc----
Confidence 998642 47889999999999999999999 8999999999999999999999999999875432211
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||.+.+..++.++|||||||++|++++|+.||........ ...
T Consensus 171 -------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-----~~~ 226 (297)
T cd06656 171 -------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LYL 226 (297)
T ss_pred -------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-----eee
Confidence 01123456779999999888899999999999999999999999954322111 000
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+ .... .......+.+++.+||+.+|++||++.+++++
T Consensus 227 ~~~~~~~--~~~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 227 IATNGTP--ELQN--------PERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred eccCCCC--CCCC--------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111100 0000 11122356789999999999999999999884
No 229
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.5e-36 Score=313.00 Aligned_cols=258 Identities=21% Similarity=0.275 Sum_probs=193.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||+|+||.||++... ++..+|+|.+.... .....++.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L 86 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 86 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcH
Confidence 46999999999999865 57788999886542 22345688999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.++++.. ..+++..+..++.|++.||+|||+. .+++||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---- 154 (308)
T cd06615 87 DQVLKKA------GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---- 154 (308)
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccccc----
Confidence 9999764 3588999999999999999999972 379999999999999999999999999986442110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||...... ....+..
T Consensus 155 ---------------------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~ 211 (308)
T cd06615 155 ---------------------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFG 211 (308)
T ss_pred ---------------------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhc
Confidence 11235677899999998888999999999999999999999998543211 1111111
Q ss_pred HHHhhcCCcc-------------------cccCcccc---cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 611 LILEDRKPMT-------------------DILDPFLA---HDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 611 ~~~~~~~~~~-------------------~~~d~~l~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.......... +..+.... ...........+.+++.+||+.+|++||++.||+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 212 RPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000000 00000000 0000011234588999999999999999999999883
No 230
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.3e-36 Score=308.43 Aligned_cols=242 Identities=24% Similarity=0.396 Sum_probs=194.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSA 89 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcH
Confidence 46999999999999865 57789999886543 23456789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.. ..+++..+..++.|++.||+|||+ ++++|+||+|+||++++++.++|+|||+++.......
T Consensus 90 ~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--- 156 (277)
T cd06642 90 LDLLKP-------GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--- 156 (277)
T ss_pred HHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcch---
Confidence 999864 358899999999999999999999 8999999999999999999999999999875532110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......++..|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 157 --------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-----~~~ 211 (277)
T cd06642 157 --------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR-----VLF 211 (277)
T ss_pred --------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh-----HHh
Confidence 0112345677999999998889999999999999999999999985432211 111
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...... .+.+. ......+.+++.+||+.+|++||++.+++++
T Consensus 212 ~~~~~~-------~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 212 LIPKNS-------PPTLE-----GQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred hhhcCC-------CCCCC-----cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 111111 11111 1233467899999999999999999999986
No 231
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.7e-36 Score=313.65 Aligned_cols=199 Identities=26% Similarity=0.404 Sum_probs=158.7
Q ss_pred cccCccCceEEEEEEeC---CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEe--cCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN---NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS--VDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... ++..||+|.+..... ...+.+|++++++++||||+++++++.. ....++||||++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 46999999999999865 346899999875432 2467899999999999999999999864 456789999996
Q ss_pred CCHHHHhhcCCCc---cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee----cCCCCeEEeecCccc
Q 042348 448 GSLATAIHGKAGI---ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL----GKNMEPHISDFGLAR 520 (686)
Q Consensus 448 gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGla~ 520 (686)
++|.+++...... .....+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 4888887533211 111358899999999999999999999 899999999999999 566799999999998
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
........ ........+|..|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 161 ~~~~~~~~--------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 161 LFNSPLKP--------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCccc--------------------ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 65422110 011223456888999999876 4589999999999999999999999954
No 232
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.9e-36 Score=321.67 Aligned_cols=255 Identities=24% Similarity=0.293 Sum_probs=188.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lV~e 443 (686)
+.||+|+||.||++... .++.||||++... .......+.+|+.+++.++||||+++++++.... ..++|||
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME 102 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhh
Confidence 46999999999999864 5788999998753 2233467889999999999999999999986543 4699999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++ +|.+.+. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 103 ~~~~-~l~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 103 LMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred hhcc-cHHHHHh--------hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 9965 6777664 247889999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... ......+|..|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 171 ~~~------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 226 (355)
T cd07874 171 TSF------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226 (355)
T ss_pred Ccc------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 211 11234567889999999988899999999999999999999999954321110
Q ss_pred hHHHH------------------HHHHHhhcCCcccccCcccc------cCC-CcHHHHHHHHHHHHhccccCCCCCCCH
Q 042348 604 NIVQW------------------IQLILEDRKPMTDILDPFLA------HDL-DKEDEIVSVLKIALDCVHKSPDKRPSM 658 (686)
Q Consensus 604 ~~~~~------------------~~~~~~~~~~~~~~~d~~l~------~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~ 658 (686)
.... +...............+... .+. ........+.+++.+||+.||++|||+
T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~ 305 (355)
T cd07874 227 -WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305 (355)
T ss_pred -HHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCH
Confidence 0000 01111111000000000000 000 001123457899999999999999999
Q ss_pred HHHHHH
Q 042348 659 RHVCDS 664 (686)
Q Consensus 659 ~ev~~~ 664 (686)
.|++++
T Consensus 306 ~ell~h 311 (355)
T cd07874 306 DEALQH 311 (355)
T ss_pred HHHhcC
Confidence 999987
No 233
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=8.8e-36 Score=305.63 Aligned_cols=251 Identities=27% Similarity=0.399 Sum_probs=197.4
Q ss_pred cccCccCceEEEEEEeCC-C----ceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNN-E----EAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+.||+|+||.||+|.... + ..+|+|.+..... ....++.+|+.++++++||||+++++++.. ...++||||++
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 91 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMP 91 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCC
Confidence 469999999999998643 3 2589998866532 344678899999999999999999999987 78899999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 92 ~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 92 LGCLLDYVRNHK-----DNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 999999998654 358999999999999999999999 899999999999999999999999999998654221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
... ......++..|+|||.+....++.++|||||||++||+++ |+.||.....
T Consensus 164 ~~~---------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----- 217 (279)
T cd05057 164 KEY---------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA----- 217 (279)
T ss_pred cce---------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-----
Confidence 100 0011123456999999988889999999999999999999 9999954322
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.++.+.+.... ... .+ ..+...+.+++.+||..+|++||++.++++.|+++..
T Consensus 218 ~~~~~~~~~~~-~~~---~~--------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 218 VEIPDLLEKGE-RLP---QP--------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHHHhCCC-CCC---CC--------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 12222222211 110 00 0122357789999999999999999999999998754
No 234
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.6e-36 Score=308.66 Aligned_cols=246 Identities=22% Similarity=0.373 Sum_probs=195.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||.|+||.||++... ++..||+|.+........+.+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALD 90 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHH
Confidence 35999999999999875 57899999987665556678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.++|+|||++........
T Consensus 91 ~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~---- 158 (280)
T cd06611 91 SIMLELE-----RGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ---- 158 (280)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhccccc----
Confidence 9987643 458999999999999999999999 8999999999999999999999999998865431110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
......++..|+|||.+. ...++.++||||||+++|||++|+.||..... .
T Consensus 159 -------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----~ 214 (280)
T cd06611 159 -------------------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----M 214 (280)
T ss_pred -------------------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----H
Confidence 111234677799999874 34578899999999999999999999954322 1
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+........+. ... .......+.+++.+||+.+|++||++.+++++
T Consensus 215 ~~~~~~~~~~~~~--~~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 215 RVLLKILKSEPPT--LDQ--------PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHhcCCCCC--cCC--------cccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1122222221110 000 01122357789999999999999999999876
No 235
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-36 Score=319.74 Aligned_cols=185 Identities=24% Similarity=0.355 Sum_probs=157.5
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
...||+|+||.||+|... ++..||+|..... ....|+.++++++||||+++++++...+..++||||+. ++|
T Consensus 71 ~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 143 (357)
T PHA03209 71 IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDL 143 (357)
T ss_pred EEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcH
Confidence 346999999999999876 4678999975432 34569999999999999999999999999999999994 689
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 144 ~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 211 (357)
T PHA03209 144 YTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP---- 211 (357)
T ss_pred HHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCc----
Confidence 98887543 468999999999999999999999 899999999999999999999999999987432110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 212 --------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 --------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 112345778899999999889999999999999999999966555
No 236
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.4e-36 Score=310.37 Aligned_cols=254 Identities=28% Similarity=0.411 Sum_probs=196.3
Q ss_pred cccCccCceEEEEEEeC-CCc----eEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEE----AVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+.||+|+||.||+|... ++. .||+|.+..... ....++.+|+.++++++||||+++++++... ..++++||++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~ 91 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMP 91 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcC
Confidence 46999999999999864 343 478888865432 2234688999999999999999999998754 5679999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 92 ~g~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 92 HGCLLDYVHEHK-----DNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred CCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccCcc
Confidence 999999997653 358899999999999999999999 899999999999999999999999999998654221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ...
T Consensus 164 ~~---------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~ 220 (303)
T cd05110 164 KE---------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REI 220 (303)
T ss_pred cc---------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence 10 00112234567999999988889999999999999999998 8999854321 112
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
..+ ......... + ..+...+.+++.+||..+|++||++.++++.|+++.....
T Consensus 221 ~~~----~~~~~~~~~---~--------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 221 PDL----LEKGERLPQ---P--------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred HHH----HHCCCCCCC---C--------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 221 222111110 0 1122457789999999999999999999999999865544
No 237
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.6e-36 Score=312.23 Aligned_cols=243 Identities=19% Similarity=0.333 Sum_probs=194.5
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
.||+|+||.||++... ++..||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+
T Consensus 28 ~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 107 (297)
T cd06659 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTD 107 (297)
T ss_pred hcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHH
Confidence 5999999999999865 588999999876554556778899999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.. ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++........
T Consensus 108 ~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~----- 172 (297)
T cd06659 108 IVSQ-------TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----- 172 (297)
T ss_pred HHhh-------cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-----
Confidence 8754 348899999999999999999999 8999999999999999999999999999875432110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLI 612 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 612 (686)
......++..|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 173 ------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~~~~~~ 229 (297)
T cd06659 173 ------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV-----QAMKRL 229 (297)
T ss_pred ------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH
Confidence 111234677899999998888999999999999999999999999543211 111111
Q ss_pred HhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 613 LEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 613 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......... . .......+.+++.+||+.+|++||++.+++++
T Consensus 230 ~~~~~~~~~-------~---~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 230 RDSPPPKLK-------N---AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred hccCCCCcc-------c---cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 111110000 0 00112357789999999999999999999986
No 238
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.9e-37 Score=320.02 Aligned_cols=241 Identities=22% Similarity=0.358 Sum_probs=195.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCC----CCccchHHHHHHHHHHhccCCCCcceeeEEEEecCc--eeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGN----GGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE--KLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~lV~e~~ 445 (686)
.+||+|+|-+||||... +|..||--.++. ......++|..|+.+|+.|+|||||++|.++.+... ..+|+|.|
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 46999999999999865 466665332221 223345789999999999999999999999987655 67899999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-CCCeEEeecCccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLADI 524 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~ 524 (686)
..|+|..|+.+. +.++...++.|++||++||.|||+..| +|||||||-+||+|+. .|.+||+|+|+|.....
T Consensus 126 TSGtLr~Y~kk~------~~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 126 TSGTLREYRKKH------RRVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cCCcHHHHHHHh------ccCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 999999999876 458889999999999999999999875 8999999999999984 58999999999987653
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.. ..+..||+.|||||++. ..|++.+||||||++|+||+|+..||.....
T Consensus 199 s~-------------------------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n---- 248 (632)
T KOG0584|consen 199 SH-------------------------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN---- 248 (632)
T ss_pred cc-------------------------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC----
Confidence 22 22356788899999987 7899999999999999999999999965543
Q ss_pred HHHHHHHHHhhcCCc--ccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPM--TDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+.++.+..+.+|. ..+-| .++.+++.+|+.. .++|||+.|++++
T Consensus 249 ~AQIYKKV~SGiKP~sl~kV~d-------------Pevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 249 PAQIYKKVTSGIKPAALSKVKD-------------PEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHHHHHHHHcCCCHHHhhccCC-------------HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 345566666655431 11112 2577899999999 9999999999875
No 239
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.2e-37 Score=312.92 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=193.5
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCC--CCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGN--GGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
...||+||.+.||++...+.+.+|+|++.. .+.+....|.+|+..|.++ .|.+||++++|-..++..|+||||= ..
T Consensus 366 lk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~ 444 (677)
T KOG0596|consen 366 LKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DI 444 (677)
T ss_pred HHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-cc
Confidence 346999999999999998888899988754 3555677899999999999 5999999999999999999999986 45
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
||..+|...... ...| .++.+..|++.|+.++|. .||||.||||.|+|+- .|.+||+|||+|..+..+...
T Consensus 445 DL~kiL~k~~~~----~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 445 DLNKILKKKKSI----DPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred cHHHHHHhccCC----CchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE-eeeEEeeeechhcccCccccc
Confidence 999999987642 2334 678899999999999999 9999999999999995 579999999999876543211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC-----------CCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-----------PTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
......+||+.||+||.+.... +++++||||+|||||+|+.|+.||..
T Consensus 516 ---------------------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~ 574 (677)
T KOG0596|consen 516 ---------------------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ 574 (677)
T ss_pred ---------------------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence 1234578899999999875432 56899999999999999999999943
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. ...+.. +..+.||...-.+.......+++++|..||++||.+||++.|++++
T Consensus 575 ~-------~n~~aK-------l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 575 I-------INQIAK-------LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred H-------HHHHHH-------HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 2 111111 2222333221111111122238899999999999999999999987
No 240
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.8e-36 Score=312.86 Aligned_cols=258 Identities=20% Similarity=0.297 Sum_probs=191.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++...+..++||||++ ++|
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l 90 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDL 90 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCH
Confidence 35999999999999875 57889999986432 2233567889999999999999999999999999999999997 599
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.......
T Consensus 91 ~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--- 159 (301)
T cd07873 91 KQYLDDCG-----NSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK--- 159 (301)
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC---
Confidence 99887653 358899999999999999999999 8999999999999999999999999999874321110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... .....+
T Consensus 160 --------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~ 217 (301)
T cd07873 160 --------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFI 217 (301)
T ss_pred --------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 0112344677999998765 45788999999999999999999999643321 111111
Q ss_pred HHHHhhc--CCcccccC---------cccccCC---CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDR--KPMTDILD---------PFLAHDL---DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~--~~~~~~~d---------~~l~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....... ..+..+.+ +...... ........+.+++.+||+.||.+|||+.|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 218 FRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred HHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1111100 00000000 0000000 000122356789999999999999999999875
No 241
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.1e-35 Score=300.91 Aligned_cols=245 Identities=22% Similarity=0.365 Sum_probs=193.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecC-ceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD-EKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lV~e~~~~g 448 (686)
..||+|++|.||++... +++.||+|++.... ....+.+.+|++++++++|+|++++++.+...+ ..++||||++++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~ 85 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGG 85 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCC
Confidence 46899999999999865 46789999986532 233467889999999999999999999876544 578999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++..... ..+++.++..++.|++.||+|||+ ++++||||||+||+++.++.++|+|||+++.......
T Consensus 86 ~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~- 157 (257)
T cd08223 86 DLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD- 157 (257)
T ss_pred cHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccCC-
Confidence 99999976432 458999999999999999999999 8999999999999999999999999999976532110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||++.+..++.++||||||+++|||++|+.||.... ....
T Consensus 158 ----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~ 210 (257)
T cd08223 158 ----------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-----MNSL 210 (257)
T ss_pred ----------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHH
Confidence 0112345677999999998889999999999999999999999985322 1222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+.. .. . .......+.+++.+|++.+|++||++.+++++
T Consensus 211 ~~~~~~~~~--~~-----~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 211 VYRIIEGKL--PP-----M-----PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHhcCC--CC-----C-----ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 222222211 11 0 01123467899999999999999999999865
No 242
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.2e-35 Score=302.56 Aligned_cols=249 Identities=23% Similarity=0.369 Sum_probs=194.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc---------chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ---------RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 442 (686)
..||+|++|.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFL 85 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEE
Confidence 46999999999999864 5788999988653221 1246889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.++|+|||.++..
T Consensus 86 e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 86 EYVPGGSVAALLNNY------GAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred EecCCCCHHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 999999999999764 358899999999999999999999 89999999999999999999999999999866
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
......... ........++..|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~-----------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~- 218 (267)
T cd06628 157 EANSLSTKT-----------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL- 218 (267)
T ss_pred ccccccCCc-----------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-
Confidence 422110000 00111234677899999998888999999999999999999999999543221
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+....... .+.+. ......+.+++.+||+.||++||++.||+++
T Consensus 219 ----~~~~~~~~~~-------~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 219 ----QAIFKIGENA-------SPEIP-----SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ----HHHHHHhccC-------CCcCC-----cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 1111111110 11111 1123467789999999999999999999864
No 243
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.9e-36 Score=320.29 Aligned_cols=255 Identities=23% Similarity=0.300 Sum_probs=188.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec------CceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV------DEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lV~e 443 (686)
..||+|+||.||++... .++.||||++... .......+.+|+.+++.++||||+++++++... ...++|||
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e 109 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEe
Confidence 46999999999999865 5788999998653 223346788999999999999999999988643 34699999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++ +|.+.+. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 110 ~~~~-~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 110 LMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred CCCC-CHHHHHH--------hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 9964 7777774 247889999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... ......+|..|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 178 ~~~------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~- 232 (364)
T cd07875 178 TSF------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID- 232 (364)
T ss_pred CCC------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-
Confidence 111 1123456788999999999999999999999999999999999995432211
Q ss_pred hHHHHH------------------HHHHhhcCCccccc-C---ccccc--CC-CcHHHHHHHHHHHHhccccCCCCCCCH
Q 042348 604 NIVQWI------------------QLILEDRKPMTDIL-D---PFLAH--DL-DKEDEIVSVLKIALDCVHKSPDKRPSM 658 (686)
Q Consensus 604 ~~~~~~------------------~~~~~~~~~~~~~~-d---~~l~~--~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~ 658 (686)
.....+ .............. + +.... +. ........+.+++.+||+.||++|||+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~ 312 (364)
T cd07875 233 QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312 (364)
T ss_pred HHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCH
Confidence 010000 00011110000000 0 00000 00 000122357899999999999999999
Q ss_pred HHHHHH
Q 042348 659 RHVCDS 664 (686)
Q Consensus 659 ~ev~~~ 664 (686)
.|++++
T Consensus 313 ~e~L~h 318 (364)
T cd07875 313 DEALQH 318 (364)
T ss_pred HHHhcC
Confidence 999987
No 244
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.1e-36 Score=316.45 Aligned_cols=249 Identities=20% Similarity=0.262 Sum_probs=188.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|.+... .....+.+.+|+.++..++|+||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 86 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGG 86 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCC
Confidence 46999999999999865 5789999998642 2223456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 87 ~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 157 (331)
T cd05597 87 DLLTLLSKFE-----DRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT- 157 (331)
T ss_pred cHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC-
Confidence 9999997543 358899999999999999999999 8999999999999999999999999999875432111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.......||..|+|||++.. ..++.++|||||||++|||++|+.||....
T Consensus 158 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~---- 212 (331)
T cd05597 158 ---------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES---- 212 (331)
T ss_pred ---------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC----
Confidence 01112357888999999863 457889999999999999999999995432
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccC--CCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKS--PDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~d--P~~RPs~~ev~~~ 664 (686)
..+....+...... ... .+.. ......+.+++.+|+..+ +..||++.+++++
T Consensus 213 -~~~~~~~i~~~~~~-~~~-~~~~------~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 213 -LVETYGKIMNHKEH-FQF-PPDV------TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -HHHHHHHHHcCCCc-ccC-CCcc------CCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 12222233222111 110 0000 012234667777766543 3347899999888
No 245
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=6.6e-36 Score=308.05 Aligned_cols=258 Identities=22% Similarity=0.267 Sum_probs=187.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhcc---CCCCcceeeEEEEec-----CceeEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKI---RHPNIVSLRAYFWSV-----DEKLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~-----~~~~lV 441 (686)
..||+|+||.||+|... +++.||+|.+..... .....+.+|+.+++++ +||||+++++++... ...++|
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv 85 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLV 85 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEE
Confidence 35999999999999875 588999998865321 1224566788777765 699999999998653 347899
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|||++ ++|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 86 FEHVD-QDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred Ecccc-cCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 99997 589998876432 358999999999999999999999 8999999999999999999999999999975
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
..... ......+|..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 158 ~~~~~------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~ 213 (288)
T cd07863 158 YSCQM------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 213 (288)
T ss_pred ccCcc------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH
Confidence 53211 011234677899999998888999999999999999999999998543221
Q ss_pred chhHHHHHHHHHhhc--CCccc-------ccCcccccCC--CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 602 ELNIVQWIQLILEDR--KPMTD-------ILDPFLAHDL--DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~--~~~~~-------~~d~~l~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+ .+.. +....... ..+.. .+.+...... ..+.....+.+++.+||+.||++|||+.|++.+
T Consensus 214 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 214 D-QLGK-IFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred H-HHHH-HHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1 1111 11111000 00000 0000000000 001123457799999999999999999999864
No 246
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=8.4e-36 Score=301.33 Aligned_cols=242 Identities=26% Similarity=0.447 Sum_probs=191.4
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
...||+|+||.||++.. .++.||+|.+.... ..+.+.+|+.++++++||||+++++++... ..++||||+++++|.
T Consensus 11 ~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~ 86 (254)
T cd05083 11 GEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLV 86 (254)
T ss_pred eeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHH
Confidence 34799999999999975 56789999986532 346789999999999999999999998654 579999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++..... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----- 154 (254)
T cd05083 87 NFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----- 154 (254)
T ss_pred HHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC-----
Confidence 99976532 358899999999999999999999 899999999999999999999999999987432110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
.....+..|+|||.+.+..++.++|||||||++|||++ |+.||..... .....
T Consensus 155 ---------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~ 208 (254)
T cd05083 155 ---------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----KEVKE 208 (254)
T ss_pred ---------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-----HHHHH
Confidence 01112345999999988889999999999999999998 9999854322 12222
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
..... ... + + .......+.+++.+||+.+|++||+++++++.|++
T Consensus 209 ~~~~~-~~~-~---~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 209 CVEKG-YRM-E---P-------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHhCC-CCC-C---C-------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 22111 111 0 0 01123467799999999999999999999998864
No 247
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=9.6e-36 Score=306.31 Aligned_cols=259 Identities=21% Similarity=0.288 Sum_probs=190.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|++|.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++..++..++||||++ ++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~ 84 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MD 84 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CC
Confidence 35899999999999875 58899999986432 2234678899999999999999999999999999999999997 68
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++...... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 l~~~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-- 156 (285)
T cd07861 85 LKKYLDSLPKG---QYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR-- 156 (285)
T ss_pred HHHHHhcCCCC---CcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc--
Confidence 98888654321 458999999999999999999999 8999999999999999999999999999875431110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... .....
T Consensus 157 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~ 214 (285)
T cd07861 157 ---------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRI 214 (285)
T ss_pred ---------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHH
Confidence 0112345677999998765 457899999999999999999999995432211 11111
Q ss_pred HHHHHh--------------hcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILE--------------DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~--------------~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...... ................ ......++.+++.+||+.||++|||+.+|+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 215 FRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSA--VKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHHhCCCChhhhhcchhhHHHHhhccccCcchhHHh--cCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000 0000000000000000 00123456789999999999999999999864
No 248
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9.2e-36 Score=304.79 Aligned_cols=253 Identities=24% Similarity=0.377 Sum_probs=195.7
Q ss_pred ccCccCceEEEEEEeC------CCceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 374 LLGKSTIGIVYKVALN------NEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
.||+|+||.||+|+.. +...|++|.+...... ..+.+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 12 ~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 91 (275)
T cd05046 12 TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTD 91 (275)
T ss_pred eecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecC
Confidence 5899999999999864 2457999988664433 35679999999999999999999999999899999999999
Q ss_pred CCCHHHHhhcCCCcc---ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 447 NGSLATAIHGKAGII---SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~---~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
+|+|.+++....... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++|||+++...
T Consensus 92 ~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~ 168 (275)
T cd05046 92 LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVY 168 (275)
T ss_pred CCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEcccccccccC
Confidence 999999997654211 01258999999999999999999999 899999999999999999999999999986432
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~ 602 (686)
.... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus 169 ~~~~----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-- 224 (275)
T cd05046 169 NSEY----------------------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-- 224 (275)
T ss_pred cccc----------------------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--
Confidence 1110 01112234566999999988888999999999999999999 8888843221
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
. ..+........... . + ......+.+++.+||+.+|++||++.|+++.|.+
T Consensus 225 ~---~~~~~~~~~~~~~~--~-~--------~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 225 E---EVLNRLQAGKLELP--V-P--------EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred H---HHHHHHHcCCcCCC--C-C--------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 1 12222221111110 0 0 1123468899999999999999999999998863
No 249
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2e-35 Score=302.63 Aligned_cols=243 Identities=21% Similarity=0.371 Sum_probs=195.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||.|+||.||+|... ++..||+|.+.... ......+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSA 89 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcH
Confidence 45999999999999875 57889999886542 33456789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.. ..+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++........
T Consensus 90 ~~~i~~-------~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--- 156 (277)
T cd06640 90 LDLLRA-------GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--- 156 (277)
T ss_pred HHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc---
Confidence 999864 247889999999999999999999 8999999999999999999999999999875432110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......++..|+|||++.+..++.++|||||||++|||+||+.||....... ...
T Consensus 157 --------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-----~~~ 211 (277)
T cd06640 157 --------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR-----VLF 211 (277)
T ss_pred --------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh-----Hhh
Confidence 0112345677999999988889999999999999999999999985432211 111
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
....... +. ........+.+++.+||+.+|++||++.+++.+-
T Consensus 212 ~~~~~~~-------~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06640 212 LIPKNNP-------PT-----LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHK 254 (277)
T ss_pred hhhcCCC-------CC-----CchhhhHHHHHHHHHHcccCcccCcCHHHHHhCh
Confidence 1111100 11 1123455788999999999999999999998874
No 250
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.4e-35 Score=299.97 Aligned_cols=246 Identities=19% Similarity=0.309 Sum_probs=197.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||.|+||.||.++.. ++..+++|.+... .....+++.+|++++++++|+||+++++++.+.+..++||||+++|+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGT 85 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCc
Confidence 47999999999998854 5788999987643 23445678999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++....+ ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.......
T Consensus 86 L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-- 156 (256)
T cd08221 86 LYDKIVRQKG----QLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-- 156 (256)
T ss_pred HHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccc--
Confidence 9999976532 458999999999999999999999 8999999999999999999999999999876532210
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......++..|+|||...+..++.++||||||+++|||++|+.||.... ..+..
T Consensus 157 ---------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~ 210 (256)
T cd08221 157 ---------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN-----PLNLV 210 (256)
T ss_pred ---------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC-----HHHHH
Confidence 1112346778999999988888999999999999999999999995422 22223
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
..+...... .. . ......+.+++.+||+.+|++||++.|+++++
T Consensus 211 ~~~~~~~~~--~~-~---------~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 211 VKIVQGNYT--PV-V---------SVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHHcCCCC--CC-c---------cccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 333222111 10 0 11234577899999999999999999998763
No 251
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.5e-36 Score=329.82 Aligned_cols=254 Identities=20% Similarity=0.240 Sum_probs=183.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCC------CCcceeeEEEEec-CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRH------PNIVSLRAYFWSV-DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~nIv~l~~~~~~~-~~~~lV~e~ 444 (686)
..||+|+||.||+|... .++.||||+++.... ..+.+..|+.++.+++| .+++++++++... ++.++|||+
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~ 213 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPK 213 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEec
Confidence 46999999999999865 578899999865321 22455667777777654 4588999988765 467899999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC---------------
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM--------------- 509 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~--------------- 509 (686)
+ +++|.+++... ..+++..+..|+.||+.||+|||+. .+||||||||+|||++.++
T Consensus 214 ~-g~~l~~~l~~~------~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 214 Y-GPCLLDWIMKH------GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred c-CCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 8 77899988754 3589999999999999999999971 3899999999999998765
Q ss_pred -CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHH
Q 042348 510 -EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEM 588 (686)
Q Consensus 510 -~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~el 588 (686)
.+||+|||.+..... .....+||..|+|||++.+..++.++|||||||++|||
T Consensus 285 ~~vkl~DfG~~~~~~~--------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~el 338 (467)
T PTZ00284 285 CRVRICDLGGCCDERH--------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL 338 (467)
T ss_pred ceEEECCCCccccCcc--------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHH
Confidence 499999998753211 11234678889999999999999999999999999999
Q ss_pred HhCCCCccccCccchhHHHHHHHHHhh--------------------cCCcccccCcccc----cC--CCcHHHHHHHHH
Q 042348 589 ISGKLPMIQIGSMELNIVQWIQLILED--------------------RKPMTDILDPFLA----HD--LDKEDEIVSVLK 642 (686)
Q Consensus 589 ltG~~P~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~d~~l~----~~--~~~~~~~~~l~~ 642 (686)
++|+.||..... .+....+...... ........++... .. .........+.+
T Consensus 339 ltG~~pf~~~~~--~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 416 (467)
T PTZ00284 339 YTGKLLYDTHDN--LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCD 416 (467)
T ss_pred HhCCCCCCCCCh--HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHH
Confidence 999999954332 1222212111100 0000000011000 00 000011235779
Q ss_pred HHHhccccCCCCCCCHHHHHHH
Q 042348 643 IALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 643 l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
|+.+||++||++|||++|+++|
T Consensus 417 li~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 417 LIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred HHHHhCCcChhhCCCHHHHhcC
Confidence 9999999999999999999975
No 252
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.5e-36 Score=316.30 Aligned_cols=249 Identities=20% Similarity=0.259 Sum_probs=190.4
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++.... ++.+|+|.+.... ......+..|+.++..++|+||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g 86 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGG 86 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCC
Confidence 469999999999998764 6789999986421 122345888999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~L~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~- 157 (332)
T cd05623 87 DLLTLLSKFE-----DRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT- 157 (332)
T ss_pred cHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCCc-
Confidence 9999997643 358999999999999999999999 8999999999999999999999999999875432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.......||..|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 158 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~---- 212 (332)
T cd05623 158 ---------------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES---- 212 (332)
T ss_pred ---------------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC----
Confidence 0112345788899999885 3468899999999999999999999995432
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK--RPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~~ 664 (686)
..+....+........ +... .......+.+++.+|+..++++ |+++.|++++
T Consensus 213 -~~~~~~~i~~~~~~~~--~p~~------~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 213 -LVETYGKIMNHKERFQ--FPAQ------VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -HHHHHHHHhCCCcccc--CCCc------cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 2233333333221110 0000 0112335677888877654444 6899999888
No 253
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.7e-36 Score=337.79 Aligned_cols=248 Identities=21% Similarity=0.353 Sum_probs=188.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~ 447 (686)
..||+|+||.||++... .+..||+|.+... .......|..|+.++++++|||||+++++|... +..++||||+++
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~g 98 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDA 98 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCC
Confidence 36999999999999875 4678899988653 223356789999999999999999999998654 467999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCC----CCceecCCCCCCeeecC----------------
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP----KRYVHGDLRPSNILLGK---------------- 507 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~----~~iiHrDlkp~NILl~~---------------- 507 (686)
|+|.++|...... ...+++..++.|+.||+.||+|||+... ++||||||||+|||++.
T Consensus 99 GSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n 176 (1021)
T PTZ00266 99 GDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN 176 (1021)
T ss_pred CcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence 9999999753211 1468999999999999999999998321 35999999999999964
Q ss_pred -CCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHH
Q 042348 508 -NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVI 584 (686)
Q Consensus 508 -~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvv 584 (686)
...+||+|||+++.+.... ......||+.|+|||++.+ ..++.++||||||||
T Consensus 177 g~~iVKLsDFGlAr~l~~~s------------------------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~I 232 (1021)
T PTZ00266 177 GRPIAKIGDFGLSKNIGIES------------------------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCI 232 (1021)
T ss_pred CCCceEEccCCccccccccc------------------------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHH
Confidence 2358999999997543211 1123457888999998854 458999999999999
Q ss_pred HHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042348 585 LLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663 (686)
Q Consensus 585 l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 663 (686)
+|||+||+.||..... ....+..+ ......+ + ......+.+++..||+.+|++||++.|++.
T Consensus 233 LYELLTGk~PF~~~~~----~~qli~~l-k~~p~lp------i------~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 233 IYELCSGKTPFHKANN----FSQLISEL-KRGPDLP------I------KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHHCCCCCCcCCc----HHHHHHHH-hcCCCCC------c------CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 9999999999954322 11222222 1111110 0 011245788999999999999999999984
No 254
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.3e-35 Score=303.40 Aligned_cols=255 Identities=23% Similarity=0.376 Sum_probs=193.5
Q ss_pred cccCccCceEEEEEEeC----CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeE
Q 042348 373 FLLGKSTIGIVYKVALN----NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLL 440 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~l 440 (686)
..||+|+||.||+|... ++..||||.+... .....+++.+|++++++++||||+++++++...+ ..++
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 84 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMV 84 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEE
Confidence 46999999999999854 3678999998654 2234567889999999999999999999986543 2378
Q ss_pred EEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 441 IYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 441 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
++||+++|+|.+++...........+++..++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++
T Consensus 85 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg~~~ 161 (273)
T cd05074 85 ILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFGLSK 161 (273)
T ss_pred EEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcccccc
Confidence 99999999999887643211112357899999999999999999999 899999999999999999999999999988
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccC
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIG 599 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~ 599 (686)
........ .......++..|++||.+....++.++|||||||++|||++ |+.||....
T Consensus 162 ~~~~~~~~---------------------~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~ 220 (273)
T cd05074 162 KIYSGDYY---------------------RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE 220 (273)
T ss_pred cccCCcce---------------------ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC
Confidence 55321100 00011223456999999988889999999999999999999 888885432
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
. .+. ...+.... .... . ......+.+++.+||+.+|++||++.|+++.|+++
T Consensus 221 ~--~~~---~~~~~~~~-~~~~--~---------~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 221 N--SEI---YNYLIKGN-RLKQ--P---------PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred H--HHH---HHHHHcCC-cCCC--C---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2 111 11111111 1110 0 11234688999999999999999999999999876
No 255
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.5e-36 Score=306.07 Aligned_cols=249 Identities=30% Similarity=0.465 Sum_probs=194.9
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccch--HHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRF--KEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|+||.||++.... ++.+|+|.+........ ....+|+.++++++||||+++++++...+..++||||+++++
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~ 84 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGS 84 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEB
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccccc
Confidence 469999999999999775 56899999977644332 234569999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++.++|+|||.+.......
T Consensus 85 L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~--- 152 (260)
T PF00069_consen 85 LQDYLQKN------KPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN--- 152 (260)
T ss_dssp HHHHHHHH------SSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT---
T ss_pred cccccccc------cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc---
Confidence 99999832 468999999999999999999999 899999999999999999999999999987541100
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCccccc-CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......++..|+|||++. +..++.++||||+|+++|+|++|..||..... .+....
T Consensus 153 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~ 210 (260)
T PF00069_consen 153 --------------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEI 210 (260)
T ss_dssp --------------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHH
T ss_pred --------------------cccccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhh
Confidence 1223455677899999998 78899999999999999999999999965411 111122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.......... ... .........+.+++.+||+.||++||++.+++++
T Consensus 211 ~~~~~~~~~~--~~~-------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 211 IEKILKRPLP--SSS-------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHHTHHH--HHT-------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred hhhccccccc--ccc-------cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2222111000 000 0000012578899999999999999999999864
No 256
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.4e-36 Score=321.32 Aligned_cols=266 Identities=20% Similarity=0.271 Sum_probs=193.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|.+.... ......+..|+.++.+++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg 86 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGG 86 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCc
Confidence 46999999999999875 57899999986432 223456888999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 87 DMMTLLMKK------DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 999999764 358999999999999999999999 99999999999999999999999999999865432111
Q ss_pred ccccccccccCCCC---------CCCc-----cccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCC
Q 042348 529 PEVHWEQSTTGTPL---------QSSP-----YEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594 (686)
Q Consensus 529 ~~~~~~~~~~g~~~---------~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P 594 (686)
... .......+. .... .........+||..|+|||++.+..++.++|||||||++|||+||+.|
T Consensus 158 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 158 EFY--RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccc--cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 000 000000000 0000 000112245789999999999999999999999999999999999999
Q ss_pred ccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC---HHHHHHH
Q 042348 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS---MRHVCDS 664 (686)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ev~~~ 664 (686)
|...... .....+....... .+.+. .. ...++.+++.+|+ .||.+|++ +.|++++
T Consensus 236 f~~~~~~-----~~~~~i~~~~~~~--~~p~~----~~---~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 236 FCSETPQ-----ETYRKVMNWKETL--VFPPE----VP---ISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCHH-----HHHHHHHcCCCce--ecCCC----CC---CCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 9543322 2222222211110 01110 00 1224567777766 49999985 6777666
No 257
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.2e-36 Score=316.80 Aligned_cols=251 Identities=23% Similarity=0.332 Sum_probs=186.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEec------CceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV------DEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lV~e 443 (686)
..||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++||||+++++++... ...+++||
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 100 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTN 100 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEee
Confidence 46999999999999864 57899999986532 22345678899999999999999999988643 34689999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
++ +++|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++...
T Consensus 101 ~~-~~~l~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 101 LM-GADLNNIVKC-------QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred cC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 98 7899988753 358999999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.. .....+|..|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 170 ~~--------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~- 222 (343)
T cd07878 170 DE--------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI- 222 (343)
T ss_pred CC--------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-
Confidence 11 112356778999999876 56899999999999999999999999543211
Q ss_pred hhHHHHHHHHHhhcCCcccccCc-----------ccccCCCc------HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDP-----------FLAHDLDK------EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~-----------~l~~~~~~------~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+....+..... .+..+.... .+...... ......+.+++.+||+.||++|||+.|++++
T Consensus 223 -~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 223 -DQLKRIMEVVG--TPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred -HHHHHHHHHhC--CCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111111100 000000000 00000000 0011246789999999999999999999977
No 258
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.2e-35 Score=300.57 Aligned_cols=245 Identities=20% Similarity=0.362 Sum_probs=196.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|+||.||++... +++.||+|++... .....+++.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGD 85 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCc
Confidence 46999999999999865 5789999988643 23344678999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++..... ..+++.++..++.|++.||+|||+ ++++|+||+|+||+++.++.++|+|||++........
T Consensus 86 l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-- 156 (256)
T cd08218 86 LYKKINAQRG----VLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE-- 156 (256)
T ss_pred HHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh--
Confidence 9999976432 357899999999999999999999 8999999999999999999999999999875432110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......++..|+|||+..+..++.++|||||||++|+|++|+.||.... ....+
T Consensus 157 ---------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~ 210 (256)
T cd08218 157 ---------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLV 210 (256)
T ss_pred ---------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHH
Confidence 0112345667999999988889999999999999999999999985322 22223
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+..+. . .......+.+++.+||+.+|++||++.||+++
T Consensus 211 ~~~~~~~~~~-------~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 211 LKIIRGSYPP-------V-----SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHhcCCCCC-------C-----cccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 3333222110 0 01123467899999999999999999999874
No 259
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.8e-36 Score=308.41 Aligned_cols=259 Identities=21% Similarity=0.273 Sum_probs=190.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|+||++ ++
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 84 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QD 84 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CC
Confidence 36899999999999875 588999999865322 223567889999999999999999999999999999999996 58
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++.... ..+++..++.++.||++||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-- 154 (284)
T cd07839 85 LKKYFDSCN-----GDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-- 154 (284)
T ss_pred HHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--
Confidence 888876543 358999999999999999999999 8999999999999999999999999999875432110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||++.+. .++.++|||||||++|||+||+.|+.........+ ..
T Consensus 155 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~-~~ 212 (284)
T cd07839 155 ---------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL-KR 212 (284)
T ss_pred ---------------------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHH-HH
Confidence 01123456779999988664 47899999999999999999999974433222111 11
Q ss_pred HHHHHhhcC-----CcccccCc----ccccCCC----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRK-----PMTDILDP----FLAHDLD----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~-----~~~~~~d~----~l~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+........ ......+. ....... .......+.+++.+||+.||++|||+.|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 213 IFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred HHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 111110000 00000000 0000000 01123467789999999999999999999864
No 260
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.3e-36 Score=315.39 Aligned_cols=249 Identities=20% Similarity=0.252 Sum_probs=190.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||+++.. +++.||+|.+... .......+.+|+.++..++|+||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg 86 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGG 86 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999876 5788999998652 1223345888999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~L~~~l~~~~-----~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 157 (331)
T cd05624 87 DLLTLLSKFE-----DRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT- 157 (331)
T ss_pred cHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc-
Confidence 9999998643 358899999999999999999999 8999999999999999999999999999975432111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.......||..|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 158 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--- 213 (331)
T cd05624 158 ---------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL--- 213 (331)
T ss_pred ---------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH---
Confidence 01112457888999998865 4678999999999999999999999954322
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK--RPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~~ 664 (686)
.+....+........ +.+.. .....++.+++.+|+..++++ |+++++++++
T Consensus 214 --~~~~~~i~~~~~~~~--~p~~~------~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 214 --VETYGKIMNHEERFQ--FPSHI------TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred --HHHHHHHHcCCCccc--CCCcc------ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 222233322211110 01101 112345778888888866544 4688888776
No 261
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.9e-35 Score=302.30 Aligned_cols=243 Identities=23% Similarity=0.385 Sum_probs=195.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||.|++|.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++++++......++|+||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 86 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSC 86 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcH
Confidence 36899999999999875 57899999986543 33456788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... .+++..+..++.|++.||+|||+ ++++||||+|+||++++++.++|+|||+++.......
T Consensus 87 ~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--- 153 (274)
T cd06609 87 LDLLKPG-------KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS--- 153 (274)
T ss_pred HHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeeccccc---
Confidence 9998753 58999999999999999999999 8999999999999999999999999999986643210
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......++..|+|||++.+..++.++|||||||++|||+||+.||...... ....
T Consensus 154 --------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~~ 208 (274)
T cd06609 154 --------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVLF 208 (274)
T ss_pred --------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHHH
Confidence 111234566799999998888999999999999999999999999543321 1111
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+..... .. +... .....+.+++.+||..+|++||++++++++
T Consensus 209 ~~~~~~~--~~-----~~~~----~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 209 LIPKNNP--PS-----LEGN----KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HhhhcCC--CC-----Cccc----ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1111111 11 1000 023357789999999999999999999875
No 262
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.7e-35 Score=303.08 Aligned_cols=258 Identities=20% Similarity=0.307 Sum_probs=192.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|++|.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 86 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTV 86 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccH
Confidence 36899999999999876 58899999886432 1223568899999999999999999999999999999999999998
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|..++... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 87 l~~~~~~~------~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07847 87 LNELEKNP------RGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-- 155 (286)
T ss_pred HHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcc--
Confidence 88877543 358999999999999999999999 8999999999999999999999999999986542211
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....
T Consensus 156 ---------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~--~~~~ 212 (286)
T cd07847 156 ---------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD--QLYL 212 (286)
T ss_pred ---------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH--HHHH
Confidence 0112235667999999865 457899999999999999999999996443221 1111
Q ss_pred HHHHHhhc-----------CCcccccCcccccCCCc----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDR-----------KPMTDILDPFLAHDLDK----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~-----------~~~~~~~d~~l~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+....... ........+........ ......+.+++.+||+.+|++||++.|++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 213 IRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred HHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 11111100 00000000000000000 0123467899999999999999999999764
No 263
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=303.78 Aligned_cols=241 Identities=22% Similarity=0.321 Sum_probs=200.4
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCcc--chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ--RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.||+|.|..|-.|++- +|+.||||++.+.... ....+.+|++.|+.++|||||++|.+.......|+|+|.=++|+|
T Consensus 25 TlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl 104 (864)
T KOG4717|consen 25 TLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDL 104 (864)
T ss_pred hhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchH
Confidence 5999999999998753 7999999999775333 345688999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee-cCCCCeEEeecCcccccccccCCc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL-GKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl-~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
+++|-++. ..+.+....+++.||+.|+.|+|. -.+|||||||+||.+ .+-|-+||.|||++-.+.+++
T Consensus 105 ~DyImKHe-----~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~--- 173 (864)
T KOG4717|consen 105 FDYIMKHE-----EGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK--- 173 (864)
T ss_pred HHHHHhhh-----ccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCcc---
Confidence 99998765 468999999999999999999999 789999999999876 577899999999997665443
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCC-CcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT-QKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
..+..+|+..|-|||.+.+..|+ +++||||+|||||.|++|+.||....+.+.
T Consensus 174 ---------------------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET----- 227 (864)
T KOG4717|consen 174 ---------------------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET----- 227 (864)
T ss_pred ---------------------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-----
Confidence 34567888899999999998875 679999999999999999999976554432
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.-.++.-+..++ .....++.+|+.+||..||.+|.+.+||+..
T Consensus 228 LTmImDCKYtvP-------------shvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 228 LTMIMDCKYTVP-------------SHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred hhhhhcccccCc-------------hhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 222222222222 2244578899999999999999999998754
No 264
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.4e-35 Score=303.21 Aligned_cols=244 Identities=21% Similarity=0.350 Sum_probs=195.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|++|.||++... +++.+++|++........+.+.+|+.++++++||||+++++++...+..++|+||+++++|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~ 104 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT 104 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHH
Confidence 46999999999999864 67889999986655455567889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.++|+|||.+........
T Consensus 105 ~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~---- 170 (285)
T cd06648 105 DIVTHT-------RMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP---- 170 (285)
T ss_pred HHHHhC-------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc----
Confidence 998752 47899999999999999999999 8999999999999999999999999998864421110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......|+..|+|||...+..++.++|||||||++|||++|+.||..... ......
T Consensus 171 -------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~ 226 (285)
T cd06648 171 -------------------RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKR 226 (285)
T ss_pred -------------------ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHH
Confidence 01123467789999999888899999999999999999999999854221 222222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+ . .... ......+.+++.+||+.+|++||++.+++++
T Consensus 227 ~~~~~~~--~-----~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 227 IRDNLPP--K-----LKNL---HKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred HHhcCCC--C-----Cccc---ccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 2222111 0 0000 0123468899999999999999999999864
No 265
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-35 Score=304.10 Aligned_cols=248 Identities=25% Similarity=0.384 Sum_probs=193.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||++... ++..||+|.+... .......+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l 86 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSL 86 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCH
Confidence 46999999999999876 6889999988653 223346789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
..++..... ...+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---- 157 (286)
T cd06622 87 DKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL---- 157 (286)
T ss_pred HHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc----
Confidence 999876421 13689999999999999999999962 489999999999999999999999999987542111
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCC------CCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR------KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.....++..|+|||.+.+. .++.++|||||||++|||++|+.||..... ..
T Consensus 158 ---------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~ 214 (286)
T cd06622 158 ---------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY--AN 214 (286)
T ss_pred ---------------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch--hh
Confidence 1122356679999988543 358899999999999999999999954322 11
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+..+.....+ . +. ......+.+++.+||+.+|++||++.+++++
T Consensus 215 ~~~~~~~~~~~~~~--~-~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 215 IFAQLSAIVDGDPP--T-LP---------SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHHHHHHhhcCCC--C-CC---------cccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 11112222221111 0 11 1133467789999999999999999999875
No 266
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=319.26 Aligned_cols=252 Identities=26% Similarity=0.384 Sum_probs=205.6
Q ss_pred hhcccCccCceEEEEEEe-CCC----ceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 371 SAFLLGKSTIGIVYKVAL-NNE----EAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 371 ~~~~iG~G~~g~Vy~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
..++||+|+||+||||.+ ++| .+||+|++... ..+..+++.+|+-+|.+++|||+++++|+|.... ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 356899999999999975 333 47899988654 3445678999999999999999999999998765 8899999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
|+.|.|.++++..+ ..+-....+.|..|||+|+.|||+ +++|||||-.+|||+.+-..+||.|||+|+.+..
T Consensus 779 mP~G~LlDyvr~hr-----~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHR-----DNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred cccchHHHHHHHhh-----ccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 99999999999876 457888999999999999999999 8999999999999999999999999999998876
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccch
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMEL 603 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~ 603 (686)
.+..... ....-.+.|||-|.+....|+.++|||||||++||++| |..|+.....++
T Consensus 851 d~~ey~~---------------------~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e- 908 (1177)
T KOG1025|consen 851 DEKEYSA---------------------PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE- 908 (1177)
T ss_pred ccccccc---------------------cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH-
Confidence 5432110 01111345999999999999999999999999999999 999996544332
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
+...++....+. .++.+...+..++.+||..|++.||+++++...+.++.
T Consensus 909 -----I~dlle~geRLs-----------qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 909 -----IPDLLEKGERLS-----------QPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred -----hhHHHhccccCC-----------CCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 333333332211 23346678899999999999999999999999887754
No 267
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.7e-35 Score=301.65 Aligned_cols=245 Identities=23% Similarity=0.274 Sum_probs=189.9
Q ss_pred cCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
||+|+||+||++... +++.||+|.+.... ......+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999765 58899999886432 22234577899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++..... ..+++.++..++.|++.||.|||+ .+++||||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---- 149 (277)
T cd05577 81 KYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---- 149 (277)
T ss_pred HHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC----
Confidence 999976542 358999999999999999999999 899999999999999999999999999987543211
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......++..|+|||++.+..++.++|||||||++|+|++|+.||....... .......
T Consensus 150 --------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~ 208 (277)
T cd05577 150 --------------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKR 208 (277)
T ss_pred --------------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHh
Confidence 0112345667999999988889999999999999999999999995433211 1111111
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
.......... ......+.+++.+||+.||++|| ++.+++++
T Consensus 209 ~~~~~~~~~~-------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 209 RTLEMAVEYP-------------DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred ccccccccCC-------------ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 1111100110 01133577999999999999999 55556554
No 268
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.8e-35 Score=301.36 Aligned_cols=251 Identities=18% Similarity=0.303 Sum_probs=194.1
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCC------ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG------WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|++|.||++.. .+++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~ 85 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWM 85 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEecc
Confidence 4699999999999985 468899999886432 112467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC-CeEEeecCccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM-EPHISDFGLARLADI 524 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~ 524 (686)
++++|.+++... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++ .+||+|||.+.....
T Consensus 86 ~~~~L~~~l~~~------~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 86 AGGSVSHLLSKY------GAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred CCCcHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999754 358899999999999999999999 8999999999999998776 599999999876543
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
...... .......++..|+|||.+.+..++.++||||+|+++|+|++|+.||.......
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-- 215 (268)
T cd06630 157 KGTGAG-------------------EFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN-- 215 (268)
T ss_pred ccccCC-------------------ccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc--
Confidence 211000 00112346778999999988889999999999999999999999995432211
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+......... +.. .......+.+++.+|++.+|++||++.|++++
T Consensus 216 ~~~~~~~~~~~~~~------~~~-----~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 216 HLALIFKIASATTA------PSI-----PEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred hHHHHHHHhccCCC------CCC-----chhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 11111111111100 000 11223467889999999999999999999854
No 269
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=318.73 Aligned_cols=264 Identities=25% Similarity=0.328 Sum_probs=196.6
Q ss_pred hcccCccCceEEEEEEe-CCCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lV~e 443 (686)
.+.||+|+||.||+|+. .+|+.||||.++.. ....++...+|+++|++++|+|||+++++-.+.. ...+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 34799999999999994 57999999999764 3445677889999999999999999999866543 5689999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec--CCC--CeEEeecCcc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG--KNM--EPHISDFGLA 519 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~--~~~--~~kl~DfGla 519 (686)
||.+|||...+...... ..|++.+.+.++.+++.||.|||+ ++||||||||.||++- .+| .-||+|||.|
T Consensus 98 yC~gGsL~~~L~~PEN~---~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPENA---YGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ecCCCcHHHHhcCcccc---cCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 99999999999876532 569999999999999999999999 9999999999999984 334 4699999999
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCcccc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQI 598 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~ 598 (686)
|-++++. ...+.+||..|.+||.+.. ..|+..+|.|||||++|+++||..||...
T Consensus 172 rel~d~s------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 172 RELDDNS------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ccCCCCC------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 9776442 3457789999999999985 78999999999999999999999999665
Q ss_pred CccchhHHHHHHHHHhhcC-CcccccCcccccC------C-----CcHHHHHHHHHHHHhccccCCCCCC--CHHHHHHH
Q 042348 599 GSMELNIVQWIQLILEDRK-PMTDILDPFLAHD------L-----DKEDEIVSVLKIALDCVHKSPDKRP--SMRHVCDS 664 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~-~~~~~~d~~l~~~------~-----~~~~~~~~l~~l~~~cl~~dP~~RP--s~~ev~~~ 664 (686)
.....+. +.+..+...++ ...-..++...+. . -.......+.+.+..+|..+|++|- ...+....
T Consensus 228 ~~pk~~~-~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~ 306 (732)
T KOG4250|consen 228 GGPKNNK-EIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAE 306 (732)
T ss_pred CCccccc-hhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHH
Confidence 5432211 11111211111 1100011111000 0 0122344566777788888999997 54444444
Q ss_pred Hh
Q 042348 665 LD 666 (686)
Q Consensus 665 L~ 666 (686)
+.
T Consensus 307 ~~ 308 (732)
T KOG4250|consen 307 VD 308 (732)
T ss_pred HH
Confidence 43
No 270
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.2e-35 Score=305.67 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=188.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEe-----cCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWS-----VDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~-----~~~~~lV~e~~ 445 (686)
..||+|+||.||++... +++.+|+|.+.... ....++..|+.+++++ +||||+++++++.. .+..++||||+
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 102 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELC 102 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeec
Confidence 35999999999999875 57889999876532 2235688899999999 69999999998853 34679999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++++|.++++..... ...+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 103 ~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 177 (286)
T cd06638 103 NGGSVTDLVKGFLKR--GERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST 177 (286)
T ss_pred CCCCHHHHHHHhhcc--CccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEEEccCCceeecccC
Confidence 999999988643211 1458899999999999999999999 89999999999999999999999999998755321
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----RKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
.. ......|+..|+|||++.. ..++.++|||||||++|||++|+.||.....
T Consensus 178 ~~-----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~ 234 (286)
T cd06638 178 RL-----------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP 234 (286)
T ss_pred CC-----------------------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch
Confidence 10 1112346778999998753 4578899999999999999999999954322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.. . ....... ......++. .....+.+++.+||+.||++|||+.||+++.
T Consensus 235 ~~----~-~~~~~~~--~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 235 MR----A-LFKIPRN--PPPTLHQPE--------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hH----H-Hhhcccc--CCCcccCCC--------CcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 11 1 1111111 001111111 1123578899999999999999999998864
No 271
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.7e-35 Score=299.73 Aligned_cols=246 Identities=21% Similarity=0.337 Sum_probs=187.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-----ccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-----WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~ 444 (686)
..||+|+||.||+|... ++..|++|.+.... ......+.+|+.++++++||||+++++++... +..+++|||
T Consensus 8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~ 87 (266)
T cd06651 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEY 87 (266)
T ss_pred ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeC
Confidence 47999999999999865 58899999875431 12345688999999999999999999998763 567899999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 88 MPGGSVKDQLKAY------GALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred CCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 9999999999754 348899999999999999999999 8999999999999999999999999999875432
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
..... .......++..|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 159 ~~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---- 214 (266)
T cd06651 159 ICMSG--------------------TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---- 214 (266)
T ss_pred ccccC--------------------CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----
Confidence 11000 011123467789999999888899999999999999999999999954321
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+....... . .+.+. ......+.+++ +||..+|++||+++||+++
T Consensus 215 -~~~~~~~~~~~-~-----~~~~~-----~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 215 -MAAIFKIATQP-T-----NPQLP-----SHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred -HHHHHHHhcCC-C-----CCCCc-----hhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 11111111110 0 11111 01122344555 6888999999999999764
No 272
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.5e-35 Score=305.88 Aligned_cols=259 Identities=22% Similarity=0.319 Sum_probs=189.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||++ ++|
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L 89 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDL 89 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CCH
Confidence 36999999999999876 578999999865322 223457789999999999999999999999999999999997 499
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~~~~~~-----~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--- 158 (291)
T cd07844 90 KQYMDDCG-----GGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK--- 158 (291)
T ss_pred HHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCc---
Confidence 99887653 358899999999999999999999 8999999999999999999999999999864321110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||........ ....+
T Consensus 159 --------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~-~~~~~ 217 (291)
T cd07844 159 --------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED-QLHKI 217 (291)
T ss_pred --------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH-HHHHH
Confidence 0011234667999998865 4578999999999999999999999954332111 11111
Q ss_pred HHHHhhcCC--cccc-------------c-CcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKP--MTDI-------------L-DPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~--~~~~-------------~-d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........+ .... . ...+............+.+++.+||+.+|++|||+.|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 218 FRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred HHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 111100000 0000 0 00000000000112457789999999999999999998753
No 273
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5e-35 Score=296.12 Aligned_cols=247 Identities=30% Similarity=0.474 Sum_probs=196.2
Q ss_pred cccCccCceEEEEEEeCC-----CceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNN-----EEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||++...+ +..||+|.+...... ..+.+..|++.+.+++|+||+++++++...+..+++|||++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~ 84 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYME 84 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccC
Confidence 468999999999998764 378999999765433 56789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+++|.+++..... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++......
T Consensus 85 ~~~l~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 85 GGDLLDYLRKNRP----KELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred CCCHHHHHHhhhh----ccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999976532 128999999999999999999999 899999999999999999999999999997654321
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. ......++..|+|||.+.+..++.++||||+|+++|||++ |+.||.... .
T Consensus 158 ~~----------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~-----~ 210 (258)
T smart00219 158 YY----------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS-----N 210 (258)
T ss_pred cc----------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----H
Confidence 10 0001124567999999988889999999999999999999 788884421 1
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
....+........ . .+ .....++.+++.+|+..+|++|||+.|+++.|
T Consensus 211 ~~~~~~~~~~~~~--~--~~--------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 211 EEVLEYLKKGYRL--P--KP--------ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHhcCCCC--C--CC--------CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 2222222222111 0 00 11234688899999999999999999998764
No 274
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.8e-35 Score=297.99 Aligned_cols=243 Identities=25% Similarity=0.371 Sum_probs=193.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-----ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-----WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|++|.||+|... ++..|++|.+.... ....+.+.+|+.++++++|+||+++++++...+..++||||++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVP 85 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecC
Confidence 46999999999999876 68899999875432 2234678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+++|.+++... ..+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 86 GGSLAKLLKKY------GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred CCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999754 358899999999999999999999 899999999999999999999999999987543211
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC-CCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
......++..|+|||.+.... ++.++|||||||++|+|++|+.||.....
T Consensus 157 ------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----- 207 (258)
T cd06632 157 ------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----- 207 (258)
T ss_pred ------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-----
Confidence 011234567799999987766 89999999999999999999999954321
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.......... ..... +.+ .....+.+++.+||+.+|++||++.+++.+
T Consensus 208 ~~~~~~~~~~-~~~~~-~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 208 VAAVFKIGRS-KELPP-IPD---------HLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHHHHHHhc-ccCCC-cCC---------CcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1111111110 11111 111 122356789999999999999999999864
No 275
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.5e-35 Score=306.90 Aligned_cols=266 Identities=25% Similarity=0.300 Sum_probs=198.7
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCcc---chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQ---RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|++|.||+|...+ ++.||+|.+...... ..+.+..|++++++++||||+++++++...+..++||||+.++
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGG 86 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCC
Confidence 369999999999998764 889999998764322 4457889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++....+ ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.........
T Consensus 87 ~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 87 ELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred CHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 99999975432 468999999999999999999999 89999999999999999999999999998765432211
Q ss_pred ccccccccccCCCC-------C--CCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 529 PEVHWEQSTTGTPL-------Q--SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 529 ~~~~~~~~~~g~~~-------~--~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
... .....+.. . .............||..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 160 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 160 VSK---ALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccc---ccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 000 00000000 0 00000012234567889999999988889999999999999999999999995433
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC----HHHHHHH
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS----MRHVCDS 664 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs----~~ev~~~ 664 (686)
... ....+......... .......+.+++.+||+.||++||+ +.|++++
T Consensus 237 ~~~-----~~~~~~~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 237 RDE-----TFSNILKKEVTFPG-----------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred hHH-----HHHHHhcCCccCCC-----------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 211 11222211111110 0012346889999999999999999 6666654
No 276
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.8e-35 Score=299.19 Aligned_cols=251 Identities=25% Similarity=0.391 Sum_probs=193.7
Q ss_pred cccCccCceEEEEEEeCC--CceEEEEEcCCC----------CccchHHHHHHHHHHhc-cCCCCcceeeEEEEecCcee
Q 042348 373 FLLGKSTIGIVYKVALNN--EEAVAVRRLGNG----------GWQRFKEFQTEAEAIGK-IRHPNIVSLRAYFWSVDEKL 439 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~~~~~~ 439 (686)
..||+|+||.||+|.... ++.+|+|.+... ......++..|+.++.+ ++||||+++++++...+..+
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 85 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLY 85 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEE
Confidence 369999999999999765 678999987532 12233557788988875 79999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcc
Q 042348 440 LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA 519 (686)
Q Consensus 440 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 519 (686)
+||||+++++|.+++...... ...+++..+++++.|++.||.|||+. .+++||||||+||+++.++.+||+|||.+
T Consensus 86 lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 86 IVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred EEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecccce
Confidence 999999999999988542111 14589999999999999999999951 57999999999999999999999999999
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
....... ......++..|+|||...+..++.++||||||+++|||++|+.||....
T Consensus 162 ~~~~~~~------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~ 217 (269)
T cd08528 162 KQKQPES------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN 217 (269)
T ss_pred eeccccc------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC
Confidence 7543221 0112345677999999998889999999999999999999999984322
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
.............. ... .......+.+++.+||+.||++||++.|+.+++++
T Consensus 218 -----~~~~~~~~~~~~~~--~~~---------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 218 -----MLSLATKIVEAVYE--PLP---------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred -----HHHHHHHHhhccCC--cCC---------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 12222222222111 000 00122467889999999999999999999998863
No 277
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.7e-35 Score=303.93 Aligned_cols=241 Identities=25% Similarity=0.447 Sum_probs=189.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||+|.+.... ....+++.+|++++++++||||+++++++...+..++||||++ |
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g 99 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-G 99 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-C
Confidence 46999999999999875 58899999886432 2334568899999999999999999999999999999999996 6
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
++.+++.... ..+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.++|+|||++......
T Consensus 100 ~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~--- 168 (307)
T cd06607 100 SASDILEVHK-----KPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA--- 168 (307)
T ss_pred CHHHHHHHcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC---
Confidence 7877776433 358999999999999999999999 89999999999999999999999999998654211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
....++..|+|||++. ...++.++||||||+++|||+||+.||......
T Consensus 169 ------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~---- 220 (307)
T cd06607 169 ------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---- 220 (307)
T ss_pred ------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH----
Confidence 1223566799999874 356889999999999999999999998543211
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
...........+ . .........+.+++.+||+.+|++||++.+|+.+.
T Consensus 221 -~~~~~~~~~~~~--~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 221 -SALYHIAQNDSP--T---------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred -HHHHHHhcCCCC--C---------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 111111111111 0 01112345688999999999999999999998763
No 278
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.1e-35 Score=302.44 Aligned_cols=239 Identities=21% Similarity=0.313 Sum_probs=193.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 86 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGG 86 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCC
Confidence 46999999999999875 57899999886532 223467889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||+|+||+++.++.+||+|||+++.....
T Consensus 87 ~L~~~~~~~------~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--- 154 (290)
T cd05580 87 ELFSHLRKS------GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--- 154 (290)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence 999999765 358999999999999999999999 89999999999999999999999999998754321
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ...
T Consensus 155 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~ 206 (290)
T cd05580 155 -----------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQI 206 (290)
T ss_pred -----------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHH
Confidence 0123456779999999888889999999999999999999999954331 112
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
.+.+.......+.. ....+.+++.+||+.||++|| +++|++++
T Consensus 207 ~~~~~~~~~~~~~~-------------~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 207 YEKILEGKVRFPSF-------------FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred HHHHhcCCccCCcc-------------CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 22222222222111 123577899999999999999 77777654
No 279
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.9e-35 Score=299.92 Aligned_cols=242 Identities=21% Similarity=0.250 Sum_probs=184.3
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHh---ccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIG---KIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~---~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+||+|+||.||++... +++.+|+|.+..... .....+.+|..++. ..+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 578999998865321 11223444544433 3479999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~------~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~ 151 (279)
T cd05633 81 GGDLHYHLSQH------GVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 151 (279)
T ss_pred CCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC
Confidence 99999998754 358999999999999999999999 899999999999999999999999999986432111
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
.....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.........
T Consensus 152 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~- 205 (279)
T cd05633 152 -------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH- 205 (279)
T ss_pred -------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-
Confidence 012346778999998864 56899999999999999999999999544322211
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
.+...... . +..+. .....++.+++.+||+.||++|| +++|++++
T Consensus 206 --~~~~~~~~---~----~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 206 --EIDRMTLT---V----NVELP-----DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --HHHHHhhc---C----CcCCc-----cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 11111100 0 01111 11234677899999999999999 69999887
No 280
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.8e-35 Score=300.84 Aligned_cols=256 Identities=22% Similarity=0.324 Sum_probs=194.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~g 448 (686)
..||.|++|.||++... +++.+|+|.+..... ....++.+|++++++++||||++++++|... +..++||||++++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 86 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGG 86 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCC
Confidence 36899999999999975 578899999875432 3456789999999999999999999998654 3679999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++..... ....+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++........
T Consensus 87 ~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~- 160 (287)
T cd06621 87 SLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA- 160 (287)
T ss_pred CHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeecccccccccccc-
Confidence 99998764221 11458899999999999999999999 8999999999999999999999999999864421110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
....++..|+|||.+.+..++.++|||||||++|||++|+.||...........+.
T Consensus 161 ------------------------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 216 (287)
T cd06621 161 ------------------------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIEL 216 (287)
T ss_pred ------------------------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHH
Confidence 11234567999999988889999999999999999999999996543211112222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......... ....+. .. ........+.+++.+||+.+|++|||+.|++++
T Consensus 217 ~~~~~~~~~--~~~~~~-~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 217 LSYIVNMPN--PELKDE-PG---NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHHHhcCCc--hhhccC-CC---CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 222222111 111000 00 001123567899999999999999999999985
No 281
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4e-35 Score=302.45 Aligned_cols=244 Identities=20% Similarity=0.338 Sum_probs=193.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||++... ++..||||.+..........+.+|+.++++++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 35999999999999874 68899999986655455567899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.. ..+++..+..++.|++.||+|||+ ++++||||||+||++++++.++|+|||++........
T Consensus 106 ~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~---- 171 (292)
T cd06657 106 DIVTH-------TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP---- 171 (292)
T ss_pred HHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceecccccc----
Confidence 98753 247899999999999999999999 8999999999999999999999999998864431110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||.+.+..++.++|||||||++|||++|+.||..... . ..+..
T Consensus 172 -------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~---~~~~~ 227 (292)
T cd06657 172 -------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--L---KAMKM 227 (292)
T ss_pred -------------------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H---HHHHH
Confidence 01123467789999999888889999999999999999999999854221 1 11111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ +... ......+.+++.+||+.+|.+||++.+++++
T Consensus 228 ~~~~~~~~-------~~~~---~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 228 IRDNLPPK-------LKNL---HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHhhCCcc-------cCCc---ccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 11111110 0000 0122356788999999999999999999875
No 282
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.4e-35 Score=305.35 Aligned_cols=258 Identities=22% Similarity=0.327 Sum_probs=191.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc--chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ--RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|+||.||+|... +++.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 86 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTV 86 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccH
Confidence 46999999999999986 4789999988653222 34568899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.++.... ..+++.+++.++.|++.||+|||+ .+++||||+|+||++++++.++|+|||++........
T Consensus 87 l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07846 87 LDDLEKYP------NGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-- 155 (286)
T ss_pred HHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc--
Confidence 98877643 348999999999999999999999 8999999999999999999999999999875432110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||+..+ ..++.++|||||||++|||++|+.||..... .+....
T Consensus 156 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--~~~~~~ 212 (286)
T cd07846 156 ---------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD--IDQLYH 212 (286)
T ss_pred ---------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch--HHHHHH
Confidence 1112345677999998865 4578899999999999999999999854321 111111
Q ss_pred HHHHHhh-----------cCCcccccCcccccCC----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILED-----------RKPMTDILDPFLAHDL----DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~-----------~~~~~~~~d~~l~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+...... .........+...... ..+.....+.+++.+||+.+|++||++.+++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 213 IIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 1110000 0000000000000000 001123468899999999999999999999864
No 283
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-36 Score=284.68 Aligned_cols=268 Identities=23% Similarity=0.335 Sum_probs=210.0
Q ss_pred CHHHHHHHhhcccCccCceEEEEEE-eCCCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeE
Q 042348 363 DLEQLLKASAFLLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLL 440 (686)
Q Consensus 363 ~~~~l~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 440 (686)
.++++.+-+.++||+|+|+.|--+. ..++..+|||++.+.....+.+..+|++++.+. .|+||+.++++|+++...|+
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYL 153 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYL 153 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEE
Confidence 3567777788999999999998875 678999999999887666778899999999999 59999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC---CeEEeecC
Q 042348 441 IYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM---EPHISDFG 517 (686)
Q Consensus 441 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfG 517 (686)
|||-|.||+|..+|+++ +.+++.++.++.++|+.||.|||. +||.|||+||+|||..+.. -+||+||.
T Consensus 154 VfEKm~GGplLshI~~~------~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 154 VFEKMRGGPLLSHIQKR------KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred EEecccCchHHHHHHHh------hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeeccc
Confidence 99999999999999877 468999999999999999999999 9999999999999997544 47999998
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCC
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGK 592 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~ 592 (686)
++.-...... -+...|| ...+.+|+..|||||+.. ...|+.++|.||||||+|-|++|.
T Consensus 225 LgSg~k~~~~-------~spastP---------~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGY 288 (463)
T KOG0607|consen 225 LGSGIKLNND-------CSPASTP---------ELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGY 288 (463)
T ss_pred cccccccCCC-------CCCCCCc---------cccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCC
Confidence 8754332211 1122222 344568888999999753 235899999999999999999999
Q ss_pred CCccccCccc-----hh-----HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 042348 593 LPMIQIGSME-----LN-----IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC 662 (686)
Q Consensus 593 ~P~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 662 (686)
.||.+.-..+ .. ....+..+..++..+++ + .......+..+++...+..+|.+|-++.+++
T Consensus 289 pPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPd---k------dWahIS~eakdlisnLlvrda~~rlsa~~vl 359 (463)
T KOG0607|consen 289 PPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPD---K------DWAHISSEAKDLISNLLVRDAKQRLSAAQVL 359 (463)
T ss_pred CCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCCh---h------hhHHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence 9995533221 11 22334444444433322 1 1122334566888888999999999999998
Q ss_pred HH
Q 042348 663 DS 664 (686)
Q Consensus 663 ~~ 664 (686)
++
T Consensus 360 nh 361 (463)
T KOG0607|consen 360 NH 361 (463)
T ss_pred CC
Confidence 74
No 284
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.6e-35 Score=302.94 Aligned_cols=258 Identities=20% Similarity=0.285 Sum_probs=190.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|++|.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+. ++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~ 84 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD 84 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cC
Confidence 35899999999999875 58899999886532 2233578899999999999999999999999999999999995 68
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++..... ..+++..+..++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++.......
T Consensus 85 l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~-- 155 (284)
T cd07860 85 LKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-- 155 (284)
T ss_pred HHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc--
Confidence 9998876432 458999999999999999999999 8999999999999999999999999999875432110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCC-CCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+.+.. ++.++|||||||++|||+||+.||...... ....+.
T Consensus 156 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~ 213 (284)
T cd07860 156 ---------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRI 213 (284)
T ss_pred ---------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHH
Confidence 011223466799999886644 688999999999999999999999543221 111111
Q ss_pred HHHHHhh--------------cCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILED--------------RKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~--------------~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+...... ...........+... .......+.+++.+||+.||++|||++|++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 214 FRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKV--VPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHH--cccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 1100000 000000000000000 00112356789999999999999999999864
No 285
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.9e-35 Score=303.84 Aligned_cols=244 Identities=22% Similarity=0.382 Sum_probs=194.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||++... ++..|++|.+........+.+.+|+.++++++||||+++++++...+..++|+||+++++|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLT 104 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHH
Confidence 46999999999999854 57889999987655455577899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++... .+++.++..++.|++.||+|||+ ++++||||||+||+++.++.++|+|||++........
T Consensus 105 ~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~---- 170 (293)
T cd06647 105 DVVTET-------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---- 170 (293)
T ss_pred HHHhhc-------CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc----
Confidence 998653 47899999999999999999999 8999999999999999999999999998875432111
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||.+....++.++|||||||++||+++|+.||........ +..
T Consensus 171 -------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-----~~~ 226 (293)
T cd06647 171 -------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LYL 226 (293)
T ss_pred -------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-----eee
Confidence 01123466779999999888899999999999999999999999954322111 111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+. .. ........+.+++.+||+.+|++||++.+++.+
T Consensus 227 ~~~~~~~~-------~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 227 IATNGTPE-------LQ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred hhcCCCCC-------CC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111110 00 011123457789999999999999999999877
No 286
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.4e-35 Score=295.11 Aligned_cols=244 Identities=23% Similarity=0.363 Sum_probs=194.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||++... +++.+|+|.+.... ....+.+.+|++++++++||||+++++.+...+..++||||+++++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGT 85 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCC
Confidence 46999999999999864 57889999986542 2345678999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-CCeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-MEPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~~~~~~~~ 528 (686)
|.+++....+ ..+++..+.+++.|++.||+|||+ ++++||||||+||+++++ +.+||+|||.++.......
T Consensus 86 L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~- 157 (256)
T cd08220 86 LAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK- 157 (256)
T ss_pred HHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc-
Confidence 9999986542 458999999999999999999999 899999999999999855 4589999999976532211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ...
T Consensus 158 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~ 209 (256)
T cd08220 158 -----------------------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-----PAL 209 (256)
T ss_pred -----------------------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHH
Confidence 1123456679999999888899999999999999999999999954322 122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+........ ....+ .....+.+++.+||+.+|++|||+.|++++
T Consensus 210 ~~~~~~~~~--~~~~~----------~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 210 VLKIMSGTF--APISD----------RYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHHHHhcCC--CCCCC----------CcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 222222211 11101 123357799999999999999999999864
No 287
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.6e-35 Score=298.34 Aligned_cols=242 Identities=22% Similarity=0.409 Sum_probs=193.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++..++..++||||+++++|
T Consensus 10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l 89 (277)
T cd06641 10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA 89 (277)
T ss_pred eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcH
Confidence 46999999999999864 57899999876432 23346788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.. ..+++..+..++.|++.|++|||+ ++++|+||||+||+++.++.++|+|||++........
T Consensus 90 ~~~i~~-------~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--- 156 (277)
T cd06641 90 LDLLEP-------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--- 156 (277)
T ss_pred HHHHhc-------CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchh---
Confidence 999864 348899999999999999999999 8999999999999999999999999999875432110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......++..|+|||.+.+..++.++|||||||++|+|++|..||..... .....
T Consensus 157 --------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~ 211 (277)
T cd06641 157 --------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLF 211 (277)
T ss_pred --------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHH
Confidence 01123456779999999888889999999999999999999999854221 11122
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+.....+ .++ ......+.+++.+||+.+|++||++.+++++
T Consensus 212 ~~~~~~~~---~~~---------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 212 LIPKNNPP---TLE---------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHhcCCCC---CCC---------cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 22111111 011 1123457789999999999999999999996
No 288
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.9e-35 Score=303.70 Aligned_cols=248 Identities=24% Similarity=0.381 Sum_probs=189.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEec-----CceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSV-----DEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-----~~~~lV~e~~ 445 (686)
..||+|+||.||++... +++.+|+|.+..... ....+.+|+.++.++ +||||+++++++... +..++||||+
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~ 106 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELC 106 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEEC
Confidence 36899999999999874 578999999865422 235678899999999 899999999998754 3579999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++|+|.++++..... ...+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.....
T Consensus 107 ~~~sL~~~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 181 (291)
T cd06639 107 NGGSVTELVKGLLIC--GQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST 181 (291)
T ss_pred CCCcHHHHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEeecccchhcccc
Confidence 999999998643211 1468999999999999999999999 89999999999999999999999999998754321
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-----CCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-----KPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
.. ......++..|+|||.+... .++.++|||||||++|||++|+.||.....
T Consensus 182 ~~-----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~ 238 (291)
T cd06639 182 RL-----------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238 (291)
T ss_pred cc-----------------------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH
Confidence 10 01123466779999987543 368999999999999999999999954321
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. ..+...... ......++ +.....+.+++.+||+.+|++||++.|++++
T Consensus 239 ~-----~~~~~~~~~--~~~~~~~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 239 V-----KTLFKIPRN--PPPTLLHP--------EKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred H-----HHHHHHhcC--CCCCCCcc--------cccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1 111111111 11111111 1223468899999999999999999999875
No 289
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.7e-35 Score=298.55 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=199.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||+|++|.||++... +++.|++|++.... ....+++.+|++++++++||||+++++++...+..++|+||+++++|
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 86 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSL 86 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcH
Confidence 46999999999999876 57889999987653 23456789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+.+++.|++.||+|||+. .+++||||||+||++++++.++|+|||.+........
T Consensus 87 ~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--- 156 (265)
T cd06605 87 DKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA--- 156 (265)
T ss_pred HHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh---
Confidence 99997653 3588999999999999999999982 4799999999999999999999999999875432110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
....++..|+|||.+.+..++.++||||||+++|+|++|+.||.............++
T Consensus 157 ----------------------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 214 (265)
T cd06605 157 ----------------------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ 214 (265)
T ss_pred ----------------------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Confidence 0134566799999998889999999999999999999999999654322223333343
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.......+. +. .......+.+++.+||..+|++|||+.|++.+
T Consensus 215 ~~~~~~~~~-------~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 215 YIVNEPPPR-------LP----SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHhcCCCCC-------CC----hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 333322111 00 01123457899999999999999999999865
No 290
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.1e-35 Score=295.99 Aligned_cols=242 Identities=20% Similarity=0.291 Sum_probs=192.6
Q ss_pred cCccCceEEEEEEeCC-CceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 375 LGKSTIGIVYKVALNN-EEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
||.|++|.||++.... ++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+++..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6999999999999764 7899999986532 22346789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++..+..++.|++.||+|||+ ++++|+||||+||+++.++.++|+|||+++.......
T Consensus 81 ~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~--- 148 (262)
T cd05572 81 WTILRDR------GLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK--- 148 (262)
T ss_pred HHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc---
Confidence 9999764 348899999999999999999999 8999999999999999999999999999876532210
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||..... +......
T Consensus 149 ---------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~ 204 (262)
T cd05572 149 ---------------------TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE---DPMEIYN 204 (262)
T ss_pred ---------------------cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC---CHHHHHH
Confidence 0122456679999999888899999999999999999999999955432 1222233
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCD 663 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 663 (686)
.+....... . .. ......+.+++.+||+.+|++||+ ++|+++
T Consensus 205 ~~~~~~~~~-~-----~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 205 DILKGNGKL-E-----FP-----NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHhccCCCC-C-----CC-----cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 333211110 0 00 011346889999999999999999 666655
No 291
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.4e-35 Score=302.42 Aligned_cols=259 Identities=20% Similarity=0.268 Sum_probs=188.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... ++..||+|++...... ....+.+|+.++++++|+||+++++++...+..++||||+. ++|
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l 89 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDL 89 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCH
Confidence 36999999999999864 5889999998654322 23467889999999999999999999999999999999995 688
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--- 158 (291)
T cd07870 90 AQYMIQHP-----GGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ--- 158 (291)
T ss_pred HHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC---
Confidence 77775443 347888899999999999999999 8999999999999999999999999999874321110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||.........+.+.
T Consensus 159 --------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~- 217 (291)
T cd07870 159 --------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKI- 217 (291)
T ss_pred --------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHH-
Confidence 0112235677999999875 357889999999999999999999996443221111111
Q ss_pred HHHHh-----------hcCCc-ccccC----cccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILE-----------DRKPM-TDILD----PFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~-----------~~~~~-~~~~d----~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... ..... ..... +.+............+.+++.+|++.||++|||+.|++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 218 WTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred HHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 00000 00000 00000 0000000000113457789999999999999999998754
No 292
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.7e-35 Score=297.89 Aligned_cols=250 Identities=24% Similarity=0.369 Sum_probs=191.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc----------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW----------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 441 (686)
+.||+|+||.||+|... +++.||+|.++.... ...+.+..|+.++++++||||+++++++...+..++|
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 86 (272)
T cd06629 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIF 86 (272)
T ss_pred ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEE
Confidence 46999999999999864 588999998753211 0124578899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|||+++++|.++++.. ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.++|+|||+++.
T Consensus 87 ~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 87 LEYVPGGSIGSCLRTY------GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred EecCCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 9999999999999765 358899999999999999999999 8999999999999999999999999999875
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC--CCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK--PTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
....... .......++..|+|||.+.... ++.++||||||+++||+++|+.||....
T Consensus 158 ~~~~~~~---------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 216 (272)
T cd06629 158 SDDIYDN---------------------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE 216 (272)
T ss_pred ccccccc---------------------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc
Confidence 4311100 0112234677899999987654 7899999999999999999999994322
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.. .. ........ ....+++... ......+.+++.+||+.+|++||++.||+++
T Consensus 217 ~~----~~-~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 217 AI----AA-MFKLGNKR--SAPPIPPDVS-----MNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred hH----HH-HHHhhccc--cCCcCCcccc-----ccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11 11 11111111 0111111111 1123468889999999999999999999875
No 293
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=7.9e-35 Score=296.19 Aligned_cols=247 Identities=21% Similarity=0.313 Sum_probs=188.8
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCC-----ccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-----WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e 443 (686)
.+.||+|+||.||+|... ++..||||.+.... ....+.+.+|+.++++++||||+++++++.+. ...++|||
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 347999999999999875 58899999875321 12345788999999999999999999998764 45789999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++++|.+++... ..+++..+++++.|++.||+|||+ .+|+|+||||+||+++.++.++|+|||+++...
T Consensus 87 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 87 HMPGGSIKDQLKSY------GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred ecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 99999999998754 347888999999999999999999 899999999999999999999999999987543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
...... .......++..|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus 158 ~~~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-- 215 (265)
T cd06652 158 TICLSG--------------------TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-- 215 (265)
T ss_pred cccccc--------------------cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH--
Confidence 211000 0112234677899999998888999999999999999999999999543111
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.. +...... +.. +.. .......+.+++.+|+. +|++||++.||+++
T Consensus 216 --~~-~~~~~~~--~~~----~~~-----~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 216 --AA-IFKIATQ--PTN----PVL-----PPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred --HH-HHHHhcC--CCC----CCC-----chhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 11 1111111 100 101 11223457788888984 99999999999864
No 294
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.1e-35 Score=304.67 Aligned_cols=258 Identities=21% Similarity=0.296 Sum_probs=191.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc-----chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ-----RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|++|.||+|... +++.||||.+...... ....+..|++++++++|+||+++++++.+.+..++||||+
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 84 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM- 84 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-
Confidence 36999999999999865 5889999998754322 2345678999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..+..++.||++||+|||+ ++|+||||||+||+++.++.++|+|||+++......
T Consensus 85 ~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 85 ETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred CCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 899999997643 258999999999999999999999 899999999999999999999999999997653221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
. ......++..|+|||.+.+ ..++.++|||||||++|||++|..||...... +.
T Consensus 157 ~-----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~--~~ 211 (298)
T cd07841 157 R-----------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI--DQ 211 (298)
T ss_pred c-----------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH--HH
Confidence 0 0112234567999998854 45789999999999999999998777543221 11
Q ss_pred HHHHHHHHhhc--------CCcccccCcccccCCC----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDR--------KPMTDILDPFLAHDLD----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~--------~~~~~~~d~~l~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........... ................ .......+.+++.+||+.+|++|||+.|++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 212 LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 11111110000 0000000000000000 01123568899999999999999999999986
No 295
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.5e-35 Score=302.81 Aligned_cols=245 Identities=24% Similarity=0.370 Sum_probs=188.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEe------cCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWS------VDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~------~~~~~lV~e~ 444 (686)
..||+|+||.||+|... +++.+|+|.+.... ....++..|+.+++++ +||||+++++++.. .+..++||||
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 100 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEF 100 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEe
Confidence 46999999999999874 57889999886543 2345788999999999 79999999999863 3567999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++|+|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.++|+|||++.....
T Consensus 101 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~ 173 (282)
T cd06636 101 CGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 173 (282)
T ss_pred CCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCcchhhhhc
Confidence 999999999976432 357888899999999999999999 8999999999999999999999999999875431
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
... ......++..|+|||.+. ...++.++|||||||++|||++|+.||....
T Consensus 174 ~~~-----------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 174 TVG-----------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred ccc-----------------------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 110 112234677899999875 3467889999999999999999999995432
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.... ....... .... . ........+.+++.+||+.||.+||++.|++++
T Consensus 231 ~~~~-----~~~~~~~--~~~~-----~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 231 PMRA-----LFLIPRN--PPPK-----L----KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HHhh-----hhhHhhC--CCCC-----C----cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 2111 1111111 0000 0 011233468899999999999999999999753
No 296
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=8.3e-35 Score=302.39 Aligned_cols=263 Identities=17% Similarity=0.263 Sum_probs=195.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||++... .++.|++|.+..... ...+.+.+|+++++.++||||+++++++...+..++||||++++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 86 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGG 86 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence 46999999999999876 468899999865432 23456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 87 DCATLLKNI------GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 999999754 358999999999999999999999 89999999999999999999999999998743211100
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
. . ..+.. ... ..........++..|+|||.+....++.++|||||||++|||++|+.||..... .+.
T Consensus 158 ~-~-----~~~~~-~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----~~~ 224 (305)
T cd05609 158 N-L-----YEGHI-EKD-TREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EEL 224 (305)
T ss_pred c-c-----ccccc-ccc-hhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHH
Confidence 0 0 00000 000 000011123567789999999888899999999999999999999999954321 122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
...........+. .. ......+.+++.+||+.+|++||++.++.+.|+.
T Consensus 225 ~~~~~~~~~~~~~-----~~-----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 225 FGQVISDDIEWPE-----GD-----EALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHhcccCCCC-----cc-----ccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 2332222111111 00 0122357899999999999999996555555544
No 297
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6.4e-35 Score=296.43 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=193.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~ 447 (686)
..||.|+||.||++... ++..||+|.+.... ....+++..|++++++++||||+++++++... ...+++|||+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~ 85 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEG 85 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccC
Confidence 36899999999999864 57889999886532 33346788999999999999999999988643 457899999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC--CCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS--PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++|.+++...... ...+++..++.++.|++.||+|||..+ ..+++||||||+||++++++.+||+|||++......
T Consensus 86 ~~L~~~l~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 163 (265)
T cd08217 86 GDLAQLIQKCKKE--RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD 163 (265)
T ss_pred CCHHHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCC
Confidence 9999999754211 146899999999999999999999221 189999999999999999999999999999865422
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
.. ......++..|+|||.+....++.++||||||+++|+|++|+.||.....
T Consensus 164 ~~-----------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----- 215 (265)
T cd08217 164 SS-----------------------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ----- 215 (265)
T ss_pred cc-----------------------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-----
Confidence 11 01123456779999999888899999999999999999999999954321
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+.+.... ... +. ......+.+++.+|++.+|++||++.+|+++
T Consensus 216 ~~~~~~~~~~~--~~~-~~---------~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 216 LQLASKIKEGK--FRR-IP---------YRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHhcCC--CCC-Cc---------cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 12222222111 111 11 1223467899999999999999999999875
No 298
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7.3e-35 Score=299.87 Aligned_cols=259 Identities=23% Similarity=0.327 Sum_probs=194.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|++|.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++...+..++||||+ +++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~ 84 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSD 84 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCC
Confidence 46899999999999875 68899999987643 223467899999999999999999999999999999999999 999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++.... ..+++.++..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++........
T Consensus 85 L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (286)
T cd07832 85 LSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-- 154 (286)
T ss_pred HHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--
Confidence 999987644 468999999999999999999999 8999999999999999999999999999875542211
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......++..|+|||.+.+. .++.++||||+|+++|||+||+.||..... ......
T Consensus 155 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~ 212 (286)
T cd07832 155 --------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND--IEQLAI 212 (286)
T ss_pred --------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH--HHHHHH
Confidence 011223567789999988654 468999999999999999999877744322 111111
Q ss_pred HHHHHhhcCC-----cccccCc---ccccCCC------cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKP-----MTDILDP---FLAHDLD------KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~-----~~~~~d~---~l~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+......... ..+..+. ....... .++....+.+++.+||+.+|++||++++++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 213 VFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred HHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111110000 0000000 0000000 01123578899999999999999999999875
No 299
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-36 Score=285.28 Aligned_cols=263 Identities=24% Similarity=0.338 Sum_probs=213.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
++||+|.||.|-.++-+ +++.+|+|++++.-. .+...-..|-++|+..+||.+..+-..|+..+..++||||..||
T Consensus 174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGG 253 (516)
T KOG0690|consen 174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGG 253 (516)
T ss_pred HHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCc
Confidence 36999999999999855 688999999987532 33445678999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
.|.-+|... +.+++....-+-.+|+.||.|||+ ++||.||||.+|.|+|.||++||.|||+++---..
T Consensus 254 eLf~HLsre------r~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~--- 321 (516)
T KOG0690|consen 254 ELFFHLSRE------RVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY--- 321 (516)
T ss_pred eEeeehhhh------hcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcccc---
Confidence 999988765 468888888899999999999999 99999999999999999999999999999732111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
| ......+||+.|.|||++....|+.++|.|.+|||||||++|+.||..... ...
T Consensus 322 ----------g----------~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh-----~kL 376 (516)
T KOG0690|consen 322 ----------G----------DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH-----EKL 376 (516)
T ss_pred ----------c----------ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch-----hHH
Confidence 1 223457888899999999999999999999999999999999999965432 233
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHHhcccccchhhhhccCCCC
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDSLDRVNISTEQQFMKGEEPK 683 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~L~~i~~~~~~~~~~~~~~~ 683 (686)
+..++.+.-..+..+.+ +...|+...|.+||.+|- .++||.++=--....++..+++.-+|+
T Consensus 377 FeLIl~ed~kFPr~ls~-------------eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PP 443 (516)
T KOG0690|consen 377 FELILMEDLKFPRTLSP-------------EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPP 443 (516)
T ss_pred HHHHHhhhccCCccCCH-------------HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCC
Confidence 44455444444333222 355778889999999994 467777665555677888899999998
Q ss_pred CC
Q 042348 684 FD 685 (686)
Q Consensus 684 ~~ 685 (686)
|.
T Consensus 444 fK 445 (516)
T KOG0690|consen 444 FK 445 (516)
T ss_pred CC
Confidence 84
No 300
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.7e-35 Score=301.60 Aligned_cols=259 Identities=20% Similarity=0.307 Sum_probs=193.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|++|.||+|... +++.||+|.++.. .....+.+.+|++++++++|+||+++++++...+..++||||++++.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~ 86 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTL 86 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCH
Confidence 46899999999999876 4789999988653 22334678999999999999999999999999999999999999877
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
+..+.... ..+++.++..++.|++.||+|||+ ++++||||||+||++++++.+||+|||++........
T Consensus 87 l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 87 LELLEASP------GGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred HHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 77665443 348999999999999999999999 8999999999999999999999999999876543211
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.||...... +....
T Consensus 156 --------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~ 213 (288)
T cd07833 156 --------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI--DQLYL 213 (288)
T ss_pred --------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 011123456779999999887 7899999999999999999999998543221 11111
Q ss_pred HHHHHhhcC----------------CcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRK----------------PMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~----------------~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......... ...+..++.............++.+++.+||+.+|++||++++++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 214 IQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred HHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 111110000 00000000000000011124568899999999999999999999753
No 301
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=9.2e-35 Score=295.82 Aligned_cols=255 Identities=26% Similarity=0.403 Sum_probs=198.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||.|+||.||+|... ++..+++|++.... ....+.+.+|++.++.++|+||+++++.+...+..++||||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l 86 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSL 86 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcH
Confidence 46899999999999865 57889999986543 23457789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.++++.... ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.++|+|||++..+.......
T Consensus 87 ~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~- 159 (267)
T cd06610 87 LDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT- 159 (267)
T ss_pred HHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc-
Confidence 999976421 1358999999999999999999999 899999999999999999999999999997664322110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
........++..|+|||++... .++.++|||||||++|||++|+.||....... ..
T Consensus 160 ------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-----~~ 216 (267)
T cd06610 160 ------------------RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-----VL 216 (267)
T ss_pred ------------------ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-----hH
Confidence 0011233567789999998776 78999999999999999999999995443221 11
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........+ .+............+.+++.+||+.||++||++.|++++
T Consensus 217 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 217 MLTLQNDPP-------SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HHHhcCCCC-------CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 112111111 111111111234567899999999999999999999874
No 302
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.7e-35 Score=298.75 Aligned_cols=243 Identities=23% Similarity=0.376 Sum_probs=192.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhccC---CCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIR---HPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
+.||+|+||.||+|... +++.||+|.+... ......++.+|+.++++++ |||++++++++......++||||+++
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~ 86 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEG 86 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCC
Confidence 46999999999999864 6889999998654 2334567889999999996 99999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
++|.+++... .+++..+..++.|++.||+|||+ .+|+||||+|+||++++++.++|+|||++........
T Consensus 87 ~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 87 GSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred CcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 9999998642 58899999999999999999999 8999999999999999999999999999876542211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... .
T Consensus 157 -----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~ 208 (277)
T cd06917 157 -----------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA-----F 208 (277)
T ss_pred -----------------------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh-----h
Confidence 0112346778999998865 4468999999999999999999999954321 1
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......... ..+.+.. ......+.+++.+||+.||++||++.|++++
T Consensus 209 ~~~~~~~~~-------~~~~~~~----~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 209 RAMMLIPKS-------KPPRLED----NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred hhhhccccC-------CCCCCCc----ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 111111111 0011111 1123468899999999999999999999874
No 303
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1e-34 Score=295.58 Aligned_cols=235 Identities=18% Similarity=0.309 Sum_probs=182.5
Q ss_pred cCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
||+|+||.||++... ++..+|+|.+....... . |+.....+ +||||+++++++...+..++||||+++|+|.+
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~ 98 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD 98 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence 699999999999865 57889999886532221 1 22222222 79999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC-CeEEeecCcccccccccCCccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM-EPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~~~~~~~ 531 (686)
++... ..+++.++..++.|++.||+|||+ .+++||||||+||+++.++ .++|+|||+++.....
T Consensus 99 ~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~------ 163 (267)
T PHA03390 99 LLKKE------GKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP------ 163 (267)
T ss_pred HHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC------
Confidence 99764 358999999999999999999999 8999999999999999988 9999999998754311
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
....++..|+|||++.+..++.++|||||||++|||++|+.||........+...+...
T Consensus 164 ---------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 222 (267)
T PHA03390 164 ---------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR 222 (267)
T ss_pred ---------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh
Confidence 11235667999999998889999999999999999999999996443333233333222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-HHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-MRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ev~~~ 664 (686)
. ....+.. ......+.+++.+||+.+|++||+ ++|++++
T Consensus 223 ~-~~~~~~~-------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 223 Q-QKKLPFI-------------KNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred h-cccCCcc-------------cccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 2 1111111 112345788999999999999996 6888753
No 304
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.3e-34 Score=300.72 Aligned_cols=244 Identities=24% Similarity=0.438 Sum_probs=191.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... ++..||+|.+.... .....++.+|++++++++|||++++++++...+..++||||++ |
T Consensus 31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g 109 (317)
T cd06635 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-G 109 (317)
T ss_pred heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-C
Confidence 46999999999999865 57899999986432 2234578899999999999999999999999999999999996 5
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++.... ..+++.++..++.|++.||.|||+ ++|+||||+|+||+++.++.+||+|||++......
T Consensus 110 ~l~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 110 SASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA--- 178 (317)
T ss_pred CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence 8888776443 458999999999999999999999 89999999999999999999999999988643211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
....++..|+|||++. ...++.++|||||||++|||++|+.||......
T Consensus 179 ------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---- 230 (317)
T cd06635 179 ------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---- 230 (317)
T ss_pred ------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH----
Confidence 1234566799999873 456899999999999999999999998543211
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
...........+.. ........+.+++.+||+.+|++||++.++++++...
T Consensus 231 -~~~~~~~~~~~~~~-----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 231 -SALYHIAQNESPTL-----------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred -HHHHHHHhccCCCC-----------CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 11222222211110 0112234578999999999999999999999876443
No 305
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.5e-34 Score=293.86 Aligned_cols=250 Identities=24% Similarity=0.334 Sum_probs=195.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.|++|.+..... ...+.+..|+.++++++|+||+++++++...+..++|+||+++++
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGT 85 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCc
Confidence 46999999999999865 678999999876543 256789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++..........
T Consensus 86 L~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 86 LEELLEHG------RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred HHHHHhhc------CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 99999764 347889999999999999999999 899999999999999999999999999987654322100
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCC---CCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK---PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
. .......++..|+|||++.+.. ++.++||||||+++||+++|+.||.......
T Consensus 157 ~-------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~---- 213 (264)
T cd06626 157 G-------------------EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF---- 213 (264)
T ss_pred c-------------------ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH----
Confidence 0 0011234567799999987765 8899999999999999999999995432111
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...........+ .+... ......+.+++.+||+.+|++||++.|++.+
T Consensus 214 ~~~~~~~~~~~~-------~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 214 QIMFHVGAGHKP-------PIPDS---LQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred HHHHHHhcCCCC-------CCCcc---cccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111111111111 01000 1113456789999999999999999998753
No 306
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5e-35 Score=300.65 Aligned_cols=247 Identities=19% Similarity=0.284 Sum_probs=186.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHH-HhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEA-IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||++... +++.||+|++..... ....++..|+.. ++..+||||+++++++...+..++||||++ |+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TS 85 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-cc
Confidence 36899999999999876 589999999875422 223456667665 566689999999999999999999999996 68
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC-CceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK-RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
|.+++...... ...+++..+..++.|++.||+|||+ + +++||||||+||+++.++.+||+|||+++......
T Consensus 86 l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (283)
T cd06617 86 LDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV-- 158 (283)
T ss_pred HHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccccc--
Confidence 98888653221 1468999999999999999999998 6 89999999999999999999999999987543111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC----CCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV----RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
..+...++..|+|||.+.+ ..++.++|||||||++|||++|+.||........
T Consensus 159 ----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~- 215 (283)
T cd06617 159 ----------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ- 215 (283)
T ss_pred ----------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH-
Confidence 0112345677999998764 4568899999999999999999999954322111
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.......... ..... .....++.+++.+||+.+|++||++.+++++
T Consensus 216 ---~~~~~~~~~~--~~~~~---------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 216 ---QLKQVVEEPS--PQLPA---------EKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred ---HHHHHHhcCC--CCCCc---------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112211111 11100 1123467899999999999999999999874
No 307
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.7e-34 Score=297.26 Aligned_cols=246 Identities=25% Similarity=0.394 Sum_probs=196.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|++|.||+|... ++..|++|.+..... ..+.+.+|++.+++++|+||+++++++...+..++|+||+++++|.
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLT 103 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHH
Confidence 36999999999999987 578899999876543 4567899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.++|+|||++........
T Consensus 104 ~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---- 171 (286)
T cd06614 104 DIITQNF-----VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS---- 171 (286)
T ss_pred HHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh----
Confidence 9998753 368999999999999999999999 8999999999999999999999999998865432110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... .....
T Consensus 172 -------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-----~~~~~ 227 (286)
T cd06614 172 -------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-----RALFL 227 (286)
T ss_pred -------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH
Confidence 011223566799999998888999999999999999999999998533221 11111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
..... .....+ .......+.+++.+||+.+|.+||++.+++++-
T Consensus 228 ~~~~~--~~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 271 (286)
T cd06614 228 ITTKG--IPPLKN--------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP 271 (286)
T ss_pred HHhcC--CCCCcc--------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence 11111 111111 111234678899999999999999999998753
No 308
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=337.58 Aligned_cols=249 Identities=25% Similarity=0.357 Sum_probs=198.2
Q ss_pred hcccCccCceEEEEEEe-CCCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+..||.|.||.||-+.. ++|+..|||-++.. .....+...+|+.++..++|||+|+++|+-.+.+..+|.||||++|
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 45799999999999874 56888999977543 3344567889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+.+...+ -.++.....+..|++.|++|||+ .|||||||||.||+++.+|.+|++|||.|..+......
T Consensus 1320 sLa~ll~~gr------i~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1320 SLASLLEHGR------IEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred cHHHHHHhcc------hhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecCchhc
Confidence 9999997653 35666667788999999999999 99999999999999999999999999999876533110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC---CCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK---PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
.+ .......||+.|||||++.+.. -..++||||+|||++||+||++||...+..
T Consensus 1391 ----------------~~---~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---- 1447 (1509)
T KOG4645|consen 1391 ----------------MP---GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---- 1447 (1509)
T ss_pred ----------------CC---HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch----
Confidence 00 2345678899999999997643 467899999999999999999999665432
Q ss_pred HHHHHHHHhhcCC-cccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 606 VQWIQLILEDRKP-MTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 606 ~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.+.+..+..+..| +++ .-..+-.+++..||+.||++|.++.|++++=
T Consensus 1448 ~aIMy~V~~gh~Pq~P~-------------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1448 WAIMYHVAAGHKPQIPE-------------RLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred hHHHhHHhccCCCCCch-------------hhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 2223333333322 221 1233456899999999999999999888763
No 309
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1e-34 Score=300.01 Aligned_cols=258 Identities=22% Similarity=0.281 Sum_probs=190.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~ 447 (686)
+.||+|+||.||+|... +++.+++|.++.... .....+.+|+.++++++||||+++++++... +..++||||++
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~- 89 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE- 89 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-
Confidence 46999999999999976 578899999865432 2234577899999999999999999999877 88999999997
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
++|.+++.... ..+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 90 HDLKSLMETMK-----QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred cCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 59999987643 358999999999999999999999 8999999999999999999999999999875542210
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
......++..|+|||.+.+. .++.++||||||+++|||++|+.||......+ ..
T Consensus 162 -----------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~--~~ 216 (293)
T cd07843 162 -----------------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID--QL 216 (293)
T ss_pred -----------------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH--HH
Confidence 01123346679999988654 46899999999999999999999995433211 11
Q ss_pred HHHHHHHhh---------------c-CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILED---------------R-KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~---------------~-~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+...... . ..........+............+.+++.+||+.+|++|||+.|++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 217 NKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111110000 0 000000000000111100023457789999999999999999999864
No 310
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=277.13 Aligned_cols=245 Identities=21% Similarity=0.339 Sum_probs=190.6
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.||.|..|.|++++.+ +|..+|||.+... +..+.+++...++++.+-+ .|+||+.+|||..+...++.||.|.- -+
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ 177 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-CA 177 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-HH
Confidence 4899999999999976 4788999998764 4455677888888877764 89999999999999999999999842 45
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
+.++..-. +++++.-+-++...+++||.||.+. ++|||||+||+|||+|+.|++|++|||++-.+-+...
T Consensus 178 ekLlkrik-----~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA--- 247 (391)
T KOG0983|consen 178 EKLLKRIK-----GPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--- 247 (391)
T ss_pred HHHHHHhc-----CCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeecccc---
Confidence 55554432 5688888889999999999999974 6899999999999999999999999999976653321
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC---CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV---RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.+...|.+.|||||.+.- ..|+.++||||||++++||.||+.||.....+-.
T Consensus 248 ---------------------htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe---- 302 (391)
T KOG0983|consen 248 ---------------------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE---- 302 (391)
T ss_pred ---------------------cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH----
Confidence 122345556999998854 4689999999999999999999999966443322
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....++.+..+ .+.... .....+.+++..||.+|+.+||...+++++
T Consensus 303 ~ltkvln~ePP-------~L~~~~---gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 303 VLTKVLNEEPP-------LLPGHM---GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHHHhcCCC-------CCCccc---CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 22333333222 121111 133467889999999999999999999887
No 311
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2e-34 Score=300.96 Aligned_cols=262 Identities=18% Similarity=0.242 Sum_probs=189.8
Q ss_pred cCccCceEEEEEEeCCCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 375 LGKSTIGIVYKVALNNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
+|.|+++.||++.. +++.||||++... .....+.+.+|++++++++||||+++++++...+..+++|||+++|+|.+
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 44555555555544 5889999998654 33445689999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||.+...........
T Consensus 89 ~l~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~-- 159 (314)
T cd08216 89 LLKTHFP----EGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR-- 159 (314)
T ss_pred HHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccc--
Confidence 9986532 358899999999999999999999 8999999999999999999999999998875532211000
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
.. ........++..|+|||++.. ..++.++|||||||++|||++|+.||........ . ..
T Consensus 160 ---~~-----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~---~~ 221 (314)
T cd08216 160 ---VV-----------HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-L---LE 221 (314)
T ss_pred ---cc-----------ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-H---HH
Confidence 00 011123445678999999865 3588999999999999999999999964332111 1 11
Q ss_pred HHHhhcCC-------------ccc----ccCcccc---cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 611 LILEDRKP-------------MTD----ILDPFLA---HDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~-------------~~~----~~d~~l~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ ... ..++... ...........+.+++.+||+.||++|||+.|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 222 KVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred HHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 11100000 000 0000000 000111233467889999999999999999999886
No 312
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=7.7e-35 Score=297.68 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=191.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecC------ceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVD------EKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~------~~~lV~e~ 444 (686)
..||+|++|.||+|... +++.+++|.+..... ..+++.+|+.+++++ +|+||+++++++.... ..++||||
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 90 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMEL 90 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEc
Confidence 46999999999999975 577899999876543 346789999999999 7999999999997655 37999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++++|.+++...... ...+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||++.....
T Consensus 91 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~ 165 (275)
T cd06608 91 CGGGSVTDLVKGLRKK--GKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDS 165 (275)
T ss_pred CCCCcHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCccceeccc
Confidence 9999999998753211 1468999999999999999999999 8999999999999999999999999999875432
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----RKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
... ......++..|+|||++.. ..++.++|||||||++|||++|+.||....
T Consensus 166 ~~~-----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 222 (275)
T cd06608 166 TLG-----------------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH 222 (275)
T ss_pred chh-----------------------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc
Confidence 110 1122346778999998753 346889999999999999999999995432
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
... ....+... ...... ........+.+++.+||..||++|||+.|++++
T Consensus 223 ~~~-----~~~~~~~~--~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 223 PMR-----ALFKIPRN--PPPTLK--------SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hHH-----HHHHhhcc--CCCCCC--------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 211 11111111 111111 111233467899999999999999999999863
No 313
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.5e-34 Score=294.55 Aligned_cols=242 Identities=20% Similarity=0.245 Sum_probs=184.3
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCcc---chHHHHHHHH---HHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ---RFKEFQTEAE---AIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~---~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+||+|+||.||++... +++.||+|.+...... ....+..|.. .++...||||+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 5789999988653211 1122344443 4445579999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~~L~~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~ 151 (278)
T cd05606 81 GGDLHYHLSQH------GVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 151 (278)
T ss_pred CCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC
Confidence 99999988654 358999999999999999999999 899999999999999999999999999986442110
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
.....|+..|+|||.+.++ .++.++||||+||++|||++|+.||........
T Consensus 152 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-- 204 (278)
T cd05606 152 -------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-- 204 (278)
T ss_pred -------------------------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--
Confidence 0123467789999998754 689999999999999999999999965422211
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
............. +.. .....+.+++.+|+..+|++|| ++.+++++
T Consensus 205 ~~~~~~~~~~~~~--------~~~-----~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 205 HEIDRMTLTMAVE--------LPD-----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HHHHHHhhccCCC--------CCC-----cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 1111111111111 111 1124678899999999999999 99999875
No 314
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.5e-34 Score=301.88 Aligned_cols=261 Identities=20% Similarity=0.251 Sum_probs=191.1
Q ss_pred cCcc--CceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 375 LGKS--TIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 375 iG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
||+| +||+||++... +++.||+|.+.... ....+.+.+|+.+++.++||||++++++|...+..++||||+.+++
T Consensus 6 ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~ 85 (328)
T cd08226 6 IGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGS 85 (328)
T ss_pred hCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCC
Confidence 5666 99999999874 68999999986532 2334678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.++++||+.+..........
T Consensus 86 l~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 86 ANSLLKTYFP----EGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred HHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999876432 358899999999999999999999 899999999999999999999999998654332111100
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC--CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR--KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
. ... .......++..|+|||++.+. .++.++|||||||++|||++|+.||........
T Consensus 159 ~-----~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~---- 218 (328)
T cd08226 159 K-----VVY-----------DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM---- 218 (328)
T ss_pred c-----ccc-----------cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH----
Confidence 0 000 001112345569999998763 478999999999999999999999954322111
Q ss_pred HHHHHHhhcCCcc-----------------------------------cccCcccccCCCcHHHHHHHHHHHHhccccCC
Q 042348 608 WIQLILEDRKPMT-----------------------------------DILDPFLAHDLDKEDEIVSVLKIALDCVHKSP 652 (686)
Q Consensus 608 ~~~~~~~~~~~~~-----------------------------------~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP 652 (686)
...........+ ...+..+. ..........+.+++.+||+.||
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP 296 (328)
T cd08226 219 -LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR-TPSSKTFSPAFQNLVELCLQQDP 296 (328)
T ss_pred -HHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccccccccccccc-chhhhhhhHHHHHHHHHHccCCc
Confidence 111111000000 00000000 01112345678999999999999
Q ss_pred CCCCCHHHHHHH
Q 042348 653 DKRPSMRHVCDS 664 (686)
Q Consensus 653 ~~RPs~~ev~~~ 664 (686)
++|||+.|++++
T Consensus 297 ~~Rpta~e~l~~ 308 (328)
T cd08226 297 EKRPSASSLLSH 308 (328)
T ss_pred ccCCCHHHHhhC
Confidence 999999999866
No 315
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=8.7e-35 Score=294.30 Aligned_cols=245 Identities=23% Similarity=0.392 Sum_probs=194.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++|+||+++++++...+..++|+||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGD 85 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCc
Confidence 46999999999999876 47889999986532 2334678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC-CeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM-EPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~~~~ 528 (686)
|.+++....+ ..+++..+..++.|++.||+|||+ .+++|+||||+||++++++ .+||+|||.+........
T Consensus 86 L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~- 157 (257)
T cd08225 86 LMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME- 157 (257)
T ss_pred HHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc-
Confidence 9999976432 357999999999999999999999 8999999999999999885 469999999875532110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......|+..|+|||+..+..++.++|||||||++|||++|+.||.... ..++
T Consensus 158 ----------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~ 210 (257)
T cd08225 158 ----------------------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQL 210 (257)
T ss_pred ----------------------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHH
Confidence 0112346777999999988889999999999999999999999985322 2222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+....... ... ..+ .....+.+++.+||+.+|++|||+.|++++
T Consensus 211 ~~~~~~~~--~~~-~~~---------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 211 VLKICQGY--FAP-ISP---------NFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHHhccc--CCC-CCC---------CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 33222221 111 111 122357889999999999999999999864
No 316
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.7e-35 Score=295.97 Aligned_cols=242 Identities=21% Similarity=0.260 Sum_probs=193.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||.|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGG 85 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCC
Confidence 46999999999999876 588999999865322 34567899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++++|+||||+||++++++.++|+|||.+.......
T Consensus 86 ~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 86 DLRYHLSQK------VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 999999764 358899999999999999999999 899999999999999999999999999987543221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ....
T Consensus 155 ----------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~ 210 (258)
T cd05578 155 ----------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQI 210 (258)
T ss_pred ----------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHH
Confidence 0112345667999999988889999999999999999999999996543321 1111
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH--HHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM--RHVC 662 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~--~ev~ 662 (686)
...........+ + .....+.+++.+||+.||.+||++ +|++
T Consensus 211 ~~~~~~~~~~~~----~---------~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 211 RAKQETADVLYP----A---------TWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHhccccccCc----c---------cCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111111111111 1 122467899999999999999999 6654
No 317
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=9.2e-35 Score=299.50 Aligned_cols=249 Identities=20% Similarity=0.293 Sum_probs=188.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. ||||+++++++...+..+++|||+.. +
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~ 88 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-S 88 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-C
Confidence 36999999999999865 57899999986542 234567889999999996 99999999999999999999999864 5
Q ss_pred HHHHh---hcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 450 LATAI---HGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 450 L~~~l---~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+.++. ..... ..+++..+..++.|++.||+|||+. .+++||||||+||+++.++.+||+|||+++......
T Consensus 89 l~~l~~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 89 LDKFYKYVYEVLK----SVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred HHHHHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 55543 22211 4689999999999999999999972 389999999999999999999999999987543211
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC---CCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR---KPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
. .....++..|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 163 ~------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---- 214 (288)
T cd06616 163 A------------------------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN---- 214 (288)
T ss_pred c------------------------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----
Confidence 0 1122456779999998765 68999999999999999999999995432
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.+........+ .+.... ......++.+++.+||+.+|++|||+.+|+++
T Consensus 215 ~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 215 SVFDQLTQVVKGDPP-------ILSNSE-EREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred hHHHHHhhhcCCCCC-------cCCCcC-CCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111222222111111 111110 01234468899999999999999999999876
No 318
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-34 Score=296.69 Aligned_cols=265 Identities=22% Similarity=0.291 Sum_probs=198.6
Q ss_pred cccCccCceEEEEEEe----CCCceEEEEEcCCCCc----cchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 373 FLLGKSTIGIVYKVAL----NNEEAVAVRRLGNGGW----QRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
..||+|+||.||++.. .+|..||+|++..... ...+.+.+|++++.++ +|+||+++++++..+...++|||
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILD 85 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEe
Confidence 4699999999999986 3678999999865321 2235688999999999 69999999999999889999999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++...
T Consensus 86 ~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 86 YINGGELFTHLSQR------ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred cCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999999764 358899999999999999999999 899999999999999999999999999987543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC--CCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR--KPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
..... ......|+..|+|||.+... .++.++||||||+++|+|++|+.||.....
T Consensus 157 ~~~~~----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~- 213 (290)
T cd05613 157 EDEVE----------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE- 213 (290)
T ss_pred ccccc----------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-
Confidence 22110 01123467789999998653 468899999999999999999999953322
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH--Hhcccccchh
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS--LDRVNISTEQ 674 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~--L~~i~~~~~~ 674 (686)
................+.+.. ....+.+++.+||+.||++|| ++.+++.+ ++++. ++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~--~~~ 278 (290)
T cd05613 214 KNSQAEISRRILKSEPPYPQE-------------MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN--WDD 278 (290)
T ss_pred cccHHHHHHHhhccCCCCCcc-------------CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC--HHH
Confidence 112222233322222222111 123567899999999999997 67777765 33333 343
Q ss_pred hhhccCCCCC
Q 042348 675 QFMKGEEPKF 684 (686)
Q Consensus 675 ~~~~~~~~~~ 684 (686)
...+..+++|
T Consensus 279 ~~~~~~~~~~ 288 (290)
T cd05613 279 LAAKKVPAPF 288 (290)
T ss_pred HhhccCCCCC
Confidence 3344444444
No 319
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.7e-34 Score=296.73 Aligned_cols=255 Identities=22% Similarity=0.294 Sum_probs=190.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||.|++|.||+|... ++..||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||++ ++
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~ 83 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LD 83 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cC
Confidence 46899999999999865 68899999986542 2223568899999999999999999999999999999999995 69
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++..... ..+++..++.++.|++.||+|||+ ++++||||+|+||+++.++.++|+|||+++.......
T Consensus 84 l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 84 LKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred HHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--
Confidence 9999876532 358999999999999999999999 8999999999999999999999999999875432110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||++.+. .++.++||||||+++|||++|+.||....... .+...
T Consensus 155 ---------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~ 212 (283)
T cd07835 155 ---------------------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRI 212 (283)
T ss_pred ---------------------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 01122346679999987654 57899999999999999999999995432211 11111
Q ss_pred HHHHHhhcCCcc-----------------cccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMT-----------------DILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~-----------------~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+.. ..+.. ....+.... ........+.+++.+||+.+|++|||++|++++
T Consensus 213 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 213 FRTL---GTPDEDVWPGVTSLPDYKPTFPKWARQDLSK--VVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred HHHh---CCCChHHhhhhhhchhhhhhcccccccchhh--hcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 1110 00000 000000000 001122467899999999999999999999864
No 320
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.2e-34 Score=294.56 Aligned_cols=252 Identities=20% Similarity=0.323 Sum_probs=195.1
Q ss_pred cCccCceEEEEEEeCC-CceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 375 LGKSTIGIVYKVALNN-EEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
||+|+||.||++.... ++.+++|.+..... ...+.+.+|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999874 88999999865433 3456788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++..+..++.|++.||+|||+ ++++||||+|+||++++++.++|+|||++...........
T Consensus 81 ~~~l~~~------~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 151 (265)
T cd05579 81 ASLLENV------GSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL 151 (265)
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc
Confidence 9999764 358999999999999999999999 8999999999999999999999999999875432211000
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
...........++..|+|||......++.++||||||+++||+++|+.||..... .....
T Consensus 152 ---------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~ 211 (265)
T cd05579 152 ---------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----EEIFQ 211 (265)
T ss_pred ---------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHH
Confidence 0000111233456779999999888889999999999999999999999954322 12222
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
.........+... .....+.+++.+||+.+|++|||+.++.+.|+
T Consensus 212 ~~~~~~~~~~~~~-----------~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 212 NILNGKIEWPEDV-----------EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred HHhcCCcCCCccc-----------cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 2222211111100 01346789999999999999999966655554
No 321
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.1e-34 Score=297.55 Aligned_cols=254 Identities=18% Similarity=0.193 Sum_probs=179.0
Q ss_pred cccCccCceEEEEEEeCCC----ceEEEEEcCCCCccch-----------HHHHHHHHHHhccCCCCcceeeEEEEecC-
Q 042348 373 FLLGKSTIGIVYKVALNNE----EAVAVRRLGNGGWQRF-----------KEFQTEAEAIGKIRHPNIVSLRAYFWSVD- 436 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~nIv~l~~~~~~~~- 436 (686)
+.||+|+||.||+|...+. ..+|+|.......... .....+...+..++|+||+++++++....
T Consensus 18 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~ 97 (294)
T PHA02882 18 KLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRC 97 (294)
T ss_pred eEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecC
Confidence 4699999999999987643 4556665432211110 11223344566778999999999876543
Q ss_pred ---ceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEE
Q 042348 437 ---EKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHI 513 (686)
Q Consensus 437 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 513 (686)
..++++|++. .++.+.+... ...++..+..|+.|++.||+|||+ ++|+||||||+|||++.++.++|
T Consensus 98 ~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 98 RMYYRFILLEKLV-ENTKEIFKRI------KCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred CceEEEEEEehhc-cCHHHHHHhh------ccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCcEEE
Confidence 3478888874 3676666543 235788899999999999999999 89999999999999999999999
Q ss_pred eecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCC
Q 042348 514 SDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593 (686)
Q Consensus 514 ~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~ 593 (686)
+|||+|+.......... ..........||..|+|||++.+..++.++|||||||++|||++|+.
T Consensus 168 ~DFGla~~~~~~~~~~~----------------~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~ 231 (294)
T PHA02882 168 IDYGIASHFIIHGKHIE----------------YSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKL 231 (294)
T ss_pred EEcCCceeeccCCcccc----------------cccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 99999986643221100 00011123468889999999999999999999999999999999999
Q ss_pred CccccCccchhH----HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 594 PMIQIGSMELNI----VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 594 P~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
||.......... .+++..+...... .......+.+++..|++.+|++||++.++.+.++
T Consensus 232 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 232 PWKGFGHNGNLIHAAKCDFIKRLHEGKIK--------------IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred CCCccccchHHHHHhHHHHHHHhhhhhhc--------------cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 996553222111 1111111111100 0112346889999999999999999999998763
No 322
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=296.52 Aligned_cols=242 Identities=25% Similarity=0.280 Sum_probs=193.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.+||+|+||.||-++.+ +|+.+|.|.+.+... .......+|-.+|.+++.+.||.+-..|++.+..++|+..|.||
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG 270 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG 270 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence 47999999999998765 688999988754321 22345788999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
||.-+|...+. ..+++..+.-++.+|+.||++||. .+||.||+||+|||+|+.|+++|+|.|+|.-+..+.
T Consensus 271 DLkfHiyn~g~----~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~-- 341 (591)
T KOG0986|consen 271 DLKFHIYNHGN----PGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK-- 341 (591)
T ss_pred ceeEEeeccCC----CCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCCCC--
Confidence 99999987653 469999999999999999999999 899999999999999999999999999998665332
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....+||.+|||||++....|+...|.||+||++|||+.|+.||........ -.+.
T Consensus 342 ----------------------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk-~eEv 398 (591)
T KOG0986|consen 342 ----------------------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK-REEV 398 (591)
T ss_pred ----------------------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh-HHHH
Confidence 23456899999999999999999999999999999999999999955332211 0111
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 659 (686)
-+.+......++ +...++..++....|++||++|-..+
T Consensus 399 drr~~~~~~ey~-------------~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 399 DRRTLEDPEEYS-------------DKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred HHHHhcchhhcc-------------cccCHHHHHHHHHHHccCHHHhccCC
Confidence 122222221111 12233566777788999999996543
No 323
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.3e-34 Score=290.75 Aligned_cols=242 Identities=21% Similarity=0.257 Sum_probs=185.2
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHH-hccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAI-GKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... +++.||+|.+..... .....+..|..++ ...+|+||+++++++...+..++||||++++
T Consensus 3 ~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 82 (260)
T cd05611 3 PISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGG 82 (260)
T ss_pred cCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCC
Confidence 4899999999999875 578999999865432 1223344555544 4558999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++.....
T Consensus 83 ~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 150 (260)
T cd05611 83 DCASLIKTL------GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN--- 150 (260)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceecccc---
Confidence 999999754 358899999999999999999999 89999999999999999999999999998743210
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
....++..|+|||.+.+..++.++||||||+++|||++|..||..... ...
T Consensus 151 ------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~ 201 (260)
T cd05611 151 ------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAV 201 (260)
T ss_pred ------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHH
Confidence 122355679999999888889999999999999999999999954322 112
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
................ ......+.+++.+||+.+|++||++.++.+.|
T Consensus 202 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 202 FDNILSRRINWPEEVK---------EFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHhcccCCCCccc---------ccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 2222222111111000 11234678999999999999999776554433
No 324
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.4e-34 Score=291.11 Aligned_cols=248 Identities=25% Similarity=0.431 Sum_probs=198.6
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||+|++|.||+|.... ++.|+||++..... ...+.+.+|++.+.+++|+||+++++++...+..++||||+++++|
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 86 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSL 86 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcH
Confidence 469999999999998774 88999999876543 3457899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++..+..++.|+++||+|||+. .+++||||+|+||+++.++.++|+|||.+.........
T Consensus 87 ~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~-- 156 (264)
T cd06623 87 ADLLKKV------GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ-- 156 (264)
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc--
Confidence 9999764 3589999999999999999999973 47999999999999999999999999998765322110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
.....++..|+|||.+.+..++.++||||||+++|||+||+.||..... ....+...
T Consensus 157 ---------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~ 213 (264)
T cd06623 157 ---------------------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQ 213 (264)
T ss_pred ---------------------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHH
Confidence 0123456679999999888899999999999999999999999965432 11222222
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+.....+ . .+ .. .....+.+++.+||+.+|++||++.|++++
T Consensus 214 ~~~~~~~~--~-~~----~~----~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 214 AICDGPPP--S-LP----AE----EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHhcCCCC--C-CC----cc----cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 22221111 0 11 11 023468899999999999999999999875
No 325
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.9e-34 Score=295.75 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=194.5
Q ss_pred cccCccCceEEEEEEeC----CCceEEEEEcCCCC----ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN----NEEAVAVRRLGNGG----WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
..||+|++|.||++... ++..||||.++... ....+.+.+|+.++.++ +||||+++++.+...+..++|||
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e 85 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILD 85 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEe
Confidence 46999999999998743 46789999886432 12335688999999999 69999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++|+|.+++... ..+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||+++...
T Consensus 86 ~~~~~~L~~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 86 YVNGGELFTHLYQR------EHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred cCCCCcHHHHHhhc------CCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999998754 358899999999999999999999 899999999999999999999999999987543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC--CCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK--PTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
..... ......++..|+|||...+.. .+.++||||||+++|||++|+.||......
T Consensus 157 ~~~~~----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~ 214 (288)
T cd05583 157 AEEEE----------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ 214 (288)
T ss_pred ccccc----------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc
Confidence 22110 011234567799999987654 788999999999999999999999533221
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
.......+.......+.+.. ....+.+++.+||+.||++|||+.++.+.|+..
T Consensus 215 -~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 215 -NSQSEISRRILKSKPPFPKT-------------MSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred -chHHHHHHHHHccCCCCCcc-------------cCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 11122223332222222111 123567899999999999999998887777664
No 326
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.9e-35 Score=323.09 Aligned_cols=257 Identities=25% Similarity=0.372 Sum_probs=185.4
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEe-----------------
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS----------------- 434 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----------------- 434 (686)
+||+||||.|||++.+ ||+.+|||++.... ........+|+..+++|+|||||+++..+.+
T Consensus 486 lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~ 565 (1351)
T KOG1035|consen 486 LLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSES 565 (1351)
T ss_pred HhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhh
Confidence 6999999999999976 79999999997653 2334568899999999999999999876511
Q ss_pred --------------------------------------c-----------------------------------------
Q 042348 435 --------------------------------------V----------------------------------------- 435 (686)
Q Consensus 435 --------------------------------------~----------------------------------------- 435 (686)
.
T Consensus 566 ~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~ 645 (1351)
T KOG1035|consen 566 RSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDT 645 (1351)
T ss_pred hcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcc
Confidence 0
Q ss_pred -----------------------CceeEEEeccCCCCHHHHhhcCCCccccCCC-CHHHHHHHHHHHHHHHHHHHccCCC
Q 042348 436 -----------------------DEKLLIYDYIPNGSLATAIHGKAGIISYRPL-SWSDRLRIIKGVAKGIAFLHEVSPK 491 (686)
Q Consensus 436 -----------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l-~~~~~~~i~~~ia~gL~~LH~~~~~ 491 (686)
-..||-||||+.-.+.++++.+. .. .....++++++|+.||+|+|+ +
T Consensus 646 ~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~------~~~~~d~~wrLFreIlEGLaYIH~---~ 716 (1351)
T KOG1035|consen 646 SESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH------FNSQRDEAWRLFREILEGLAYIHD---Q 716 (1351)
T ss_pred hhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc------cchhhHHHHHHHHHHHHHHHHHHh---C
Confidence 01367799999888888887653 11 356678999999999999999 8
Q ss_pred CceecCCCCCCeeecCCCCeEEeecCcccccccccC---CccccccccccCCCCCCCccccccccCCCCCccccCccccc
Q 042348 492 RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE---TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK 568 (686)
Q Consensus 492 ~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 568 (686)
|||||||||.||++|++..+||+|||+|+....... .....+.. ..|+ .....++.+||.-|+|||.+.
T Consensus 717 giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~-~~g~-------~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 717 GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTN-RAGS-------NDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCcccc-ccCC-------CCcccccccceeeeecHHHhc
Confidence 999999999999999999999999999987331110 00000000 0111 112456789999999999987
Q ss_pred CC---CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcc-cccCcccccCCCcHHHHHHHHHHH
Q 042348 569 VR---KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMT-DILDPFLAHDLDKEDEIVSVLKIA 644 (686)
Q Consensus 569 ~~---~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~l~~~~~~~~~~~~l~~l~ 644 (686)
+. .|+.|+|+||+|||++||+. ||.. .++ -...+.....+.-|.+ +..+ +....-.+++
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T--sME--Ra~iL~~LR~g~iP~~~~f~~----------~~~~~e~slI 851 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGT--SME--RASILTNLRKGSIPEPADFFD----------PEHPEEASLI 851 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCc--hHH--HHHHHHhcccCCCCCCccccc----------ccchHHHHHH
Confidence 64 49999999999999999986 5522 122 2222222222222211 1111 2233445889
Q ss_pred HhccccCCCCCCCHHHHHHH
Q 042348 645 LDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 645 ~~cl~~dP~~RPs~~ev~~~ 664 (686)
.++++.||.+|||+.|++..
T Consensus 852 ~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 852 RWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred HHHhcCCCccCCCHHHHhhc
Confidence 99999999999999999764
No 327
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.6e-34 Score=293.29 Aligned_cols=256 Identities=19% Similarity=0.254 Sum_probs=188.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccC-CCCcceeeEEEEec--CceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSV--DEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~--~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... ++..||+|+++... ........+|+.++.++. |+||+++++++.+. +..++||||++
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~- 83 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD- 83 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-
Confidence 45899999999999865 57899999986532 222234557999999985 99999999999987 88999999996
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+.+.... ..+++.++..++.|++.||+|||+ .+++||||||+||+++. +.+||+|||+++.......
T Consensus 84 ~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 84 MNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred ccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 58888887543 358999999999999999999999 89999999999999999 9999999999975532110
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
.....++..|+|||++.. ..++.++|||||||++|||++|+.||..... .+..
T Consensus 155 ------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~ 208 (282)
T cd07831 155 ------------------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQI 208 (282)
T ss_pred ------------------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHH
Confidence 012345677999997644 5578999999999999999999999954332 1222
Q ss_pred HHHHHHHhhcCC-------cccccCcccccCCC------cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKP-------MTDILDPFLAHDLD------KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~-------~~~~~d~~l~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
............ .....+........ .......+.+++.+||+++|++||++.+++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 209 AKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred HHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 222221111000 00000000000000 01234678899999999999999999999864
No 328
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.3e-34 Score=298.55 Aligned_cols=258 Identities=24% Similarity=0.319 Sum_probs=188.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... +++.||+|.+..... .....+.+|+.++++++|+||+++++++... +..++||||+.
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~- 91 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE- 91 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-
Confidence 36999999999999875 588999999864322 1223567899999999999999999998765 45799999996
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
++|.+++.... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.......
T Consensus 92 ~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 163 (309)
T cd07845 92 QDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK 163 (309)
T ss_pred CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecCCccC
Confidence 58988887543 468999999999999999999999 8999999999999999999999999999976542110
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ....
T Consensus 164 -----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~ 218 (309)
T cd07845 164 -----------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQL 218 (309)
T ss_pred -----------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHH
Confidence 0111233567999998865 4578999999999999999999999954322 1111
Q ss_pred HHHHHHHhhcC--CcccccC------cccccC-CC-----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRK--PMTDILD------PFLAHD-LD-----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~--~~~~~~d------~~l~~~-~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+........ ......+ ..+... .. .......+.+++.+||+.||++|||+.|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 219 DLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred HHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 11111111000 0000000 000000 00 00123457789999999999999999999875
No 329
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.4e-34 Score=287.18 Aligned_cols=245 Identities=25% Similarity=0.417 Sum_probs=197.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|++|.||++... ++..+++|++........+.+.+|++.+++++|+||+++++++...+..++++||+++++|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 85 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLK 85 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHH
Confidence 46999999999999976 67889999997765555678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..+++..+..++.|++.||+|||+ ++++||||+|+||++++++.++|+|||.+........
T Consensus 86 ~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---- 153 (253)
T cd05122 86 DLLKSTN-----QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---- 153 (253)
T ss_pred HHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc----
Confidence 9997653 368999999999999999999999 8999999999999999999999999999875542210
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||...... .....
T Consensus 154 --------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~ 208 (253)
T cd05122 154 --------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM-----KALFK 208 (253)
T ss_pred --------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH-----HHHHH
Confidence 11234566799999998888999999999999999999999999543221 11111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
... .......++ ......+.+++.+||+.||++|||+.|++++
T Consensus 209 ~~~--~~~~~~~~~--------~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 209 IAT--NGPPGLRNP--------EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HHh--cCCCCcCcc--------cccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 111111111 0013467899999999999999999999864
No 330
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3e-35 Score=280.08 Aligned_cols=268 Identities=24% Similarity=0.284 Sum_probs=194.5
Q ss_pred cccCccCceEEEEEEeCC-----CceEEEEEcCCCCcc--chHHHHHHHHHHhccCCCCcceeeEEEEe-cCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALNN-----EEAVAVRRLGNGGWQ--RFKEFQTEAEAIGKIRHPNIVSLRAYFWS-VDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV~e~ 444 (686)
..||+|.||.||||.-.+ ...+|+|+++..... -.....+|+.+++.++||||+.+..+|.. +...++++||
T Consensus 30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdY 109 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDY 109 (438)
T ss_pred ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehh
Confidence 359999999999996432 237899999764221 12457899999999999999999999988 6778999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC----CCeEEeecCccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN----MEPHISDFGLAR 520 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~ 520 (686)
.+. ||.++|+..+.... +.++...+..|+.||++|+.|||+ +=|+||||||.|||+..+ |.+||+|||+|+
T Consensus 110 AEh-DL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR 184 (438)
T KOG0666|consen 110 AEH-DLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADLGLAR 184 (438)
T ss_pred hhh-hHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecccHHH
Confidence 976 99999987664433 579999999999999999999999 789999999999999877 899999999999
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
++...-. ........+-|.+|+|||.+.+ ..||.+.||||.|||+.||+|-++-|....
T Consensus 185 ~~~~plk--------------------pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 185 LFNNPLK--------------------PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred Hhhcccc--------------------ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchh
Confidence 8753211 1123345667999999999887 469999999999999999999887774321
Q ss_pred cc----chhHHHHHHHHHhhcCCcccccCcccccCCCc-----------------HH-------HHHHHHHHHHhccccC
Q 042348 600 SM----ELNIVQWIQLILEDRKPMTDILDPFLAHDLDK-----------------ED-------EIVSVLKIALDCVHKS 651 (686)
Q Consensus 600 ~~----~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~-----------------~~-------~~~~l~~l~~~cl~~d 651 (686)
.. ..-....+.++++--....+..-|.+..-+.. .. .....++|+.++|.+|
T Consensus 245 ~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yD 324 (438)
T KOG0666|consen 245 EKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYD 324 (438)
T ss_pred hhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccC
Confidence 11 00111222222221000000000111000000 00 1112678999999999
Q ss_pred CCCCCCHHHHHHHH
Q 042348 652 PDKRPSMRHVCDSL 665 (686)
Q Consensus 652 P~~RPs~~ev~~~L 665 (686)
|.+|.|+.+.+++.
T Consensus 325 P~kRIta~qAleh~ 338 (438)
T KOG0666|consen 325 PIKRITAEQALEHP 338 (438)
T ss_pred chhhccHHHHhccc
Confidence 99999999998875
No 331
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.8e-35 Score=303.64 Aligned_cols=240 Identities=22% Similarity=0.337 Sum_probs=196.6
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.||+|.|+.|..|... ++..||||.+.+.. ......+.+|+++|+.++|||||+++.+.......|+||||+.+|.+
T Consensus 63 tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~ 142 (596)
T KOG0586|consen 63 TIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGEL 142 (596)
T ss_pred eeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchh
Confidence 5999999999999865 58899999997753 23345588999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
++++.... ......+..++.|+..|++|||+ +.|||||||++|||++.++++||+|||++.++....
T Consensus 143 ~~yl~~~g------r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~---- 209 (596)
T KOG0586|consen 143 FDYLVKHG------RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL---- 209 (596)
T ss_pred HHHHHhcc------cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeecccc----
Confidence 99998774 35568889999999999999999 899999999999999999999999999998876432
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.....+|++.|.|||++.+.+| ++.+|+||+|+++|-|+.|..||++.. +...-
T Consensus 210 --------------------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~-----lk~Lr 264 (596)
T KOG0586|consen 210 --------------------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN-----LKELR 264 (596)
T ss_pred --------------------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc-----ccccc
Confidence 2345677788999999998775 689999999999999999999995432 11112
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.++..++..+ ..++.+++++++..+|.+|++++++.++
T Consensus 265 ~rvl~gk~rIp~~m-------------s~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 265 PRVLRGKYRIPFYM-------------SCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred chheeeeeccccee-------------echhHHHHHHhhccCccccCCHHHhhhh
Confidence 22222222221111 1135689999999999999999998765
No 332
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.4e-34 Score=294.93 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=192.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~ 447 (686)
..||+|++|.||+|... +++.+|+|++.... ......+.+|++++++++|||++++++++... +..++||||+++
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 84 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH 84 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc
Confidence 35899999999999876 47899999997652 23345688999999999999999999999988 789999999974
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
+|.+++.... ..+++..++.++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++........
T Consensus 85 -~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 85 -DLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred -cHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 8999887653 358999999999999999999999 8999999999999999999999999999976543211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
.......++..|+|||.+.+ ..++.++||||||+++|||+||+.||...... ...
T Consensus 156 ----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--~~~ 211 (287)
T cd07840 156 ----------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--EQL 211 (287)
T ss_pred ----------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--HHH
Confidence 00112334667999997764 45789999999999999999999999544321 111
Q ss_pred HHHHHHHhhc--CCcccccC--------------cccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDR--KPMTDILD--------------PFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~--~~~~~~~d--------------~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+....... ..+....+ ..+.... ...+...+.+++.+||+.+|++||++.+++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 212 EKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFF-KHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred HHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHh-cccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1111111000 00000000 0000000 00124568899999999999999999999864
No 333
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.6e-34 Score=295.38 Aligned_cols=259 Identities=22% Similarity=0.262 Sum_probs=188.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccC-CCCcceeeEEEEecCc-----eeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDE-----KLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~-----~~lV~e 443 (686)
..||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++ ||||+++++++...+. .++|||
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e 86 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFE 86 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEee
Confidence 46999999999999875 58899999876532 223357888999999995 6999999999987665 799999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-CCCeEEeecCccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLA 522 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~ 522 (686)
|+++ +|.+++...... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++. ++.+||+|||+++..
T Consensus 87 ~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~ 161 (295)
T cd07837 87 YLDS-DLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAF 161 (295)
T ss_pred ccCc-CHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecccceec
Confidence 9985 899888754321 11468999999999999999999999 89999999999999998 889999999998754
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
..... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......
T Consensus 162 ~~~~~-----------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~ 218 (295)
T cd07837 162 SIPVK-----------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL 218 (295)
T ss_pred CCCcc-----------------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 21110 0112234667999998765 45799999999999999999999999543221
Q ss_pred chhHHHHHHHHHhh-cCCcccccC-----------ccccc-CC--CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 602 ELNIVQWIQLILED-RKPMTDILD-----------PFLAH-DL--DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 602 ~~~~~~~~~~~~~~-~~~~~~~~d-----------~~l~~-~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. . ...+... ..+...... +.... .. ..+....++.+++.+||+.||++||++.|++.+
T Consensus 219 ~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 219 Q----Q-LLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred H----H-HHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 1 1 1111111 000000000 00000 00 001123467899999999999999999999864
No 334
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5e-34 Score=302.71 Aligned_cols=254 Identities=23% Similarity=0.305 Sum_probs=188.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec------CceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV------DEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lV~e 443 (686)
..||+|+||.||+|... +++.||+|.+... .......+.+|+.++++++||||+++++++... ...++|||
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 101 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVME 101 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEe
Confidence 46999999999999865 6889999998643 223345678899999999999999999998644 34699999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+. ++|.+.+.. .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~-~~l~~~~~~--------~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 102 LMD-ANLCQVIQM--------DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred ccC-CCHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 995 588888753 37888999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||.......
T Consensus 170 ~~~------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~- 224 (353)
T cd07850 170 TSF------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID- 224 (353)
T ss_pred CCC------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-
Confidence 211 0112345677999999998899999999999999999999999995432111
Q ss_pred hHHHHHH-------------------HHHhhcC-----CcccccCcccccCCC---cHHHHHHHHHHHHhccccCCCCCC
Q 042348 604 NIVQWIQ-------------------LILEDRK-----PMTDILDPFLAHDLD---KEDEIVSVLKIALDCVHKSPDKRP 656 (686)
Q Consensus 604 ~~~~~~~-------------------~~~~~~~-----~~~~~~d~~l~~~~~---~~~~~~~l~~l~~~cl~~dP~~RP 656 (686)
....+. ....... +..+.+......... .......+.+++.+||+.||++||
T Consensus 225 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 303 (353)
T cd07850 225 -QWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRI 303 (353)
T ss_pred -HHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCc
Confidence 000000 0000000 000000000000000 112344678999999999999999
Q ss_pred CHHHHHHH
Q 042348 657 SMRHVCDS 664 (686)
Q Consensus 657 s~~ev~~~ 664 (686)
|+.|++++
T Consensus 304 t~~eiL~~ 311 (353)
T cd07850 304 SVDDALQH 311 (353)
T ss_pred CHHHHhcC
Confidence 99999876
No 335
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=9.3e-34 Score=286.06 Aligned_cols=242 Identities=25% Similarity=0.441 Sum_probs=194.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|++|.||++... +++.|++|.+..... ...+.+.+|++++++++|||++++++++.+.+..++||||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGS 85 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCc
Confidence 46999999999999865 578899999876543 345679999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||.+.........
T Consensus 86 L~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (254)
T cd06627 86 LRQIIKKF------GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD- 155 (254)
T ss_pred HHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence 99998765 358999999999999999999999 89999999999999999999999999999865432210
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||..... .....
T Consensus 156 ----------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~ 209 (254)
T cd06627 156 ----------------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALF 209 (254)
T ss_pred ----------------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHH
Confidence 1123456679999998887789999999999999999999999954331 11111
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 663 (686)
. .... .... +.+ .....+.+++.+||..+|++||++.|++.
T Consensus 210 ~-~~~~--~~~~-~~~---------~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 210 R-IVQD--DHPP-LPE---------GISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred H-Hhcc--CCCC-CCC---------CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1 1111 1111 111 11235778999999999999999999975
No 336
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.1e-34 Score=293.28 Aligned_cols=259 Identities=24% Similarity=0.324 Sum_probs=191.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||.|++|.||+|... ++..||||.+..... .....+.+|+.++++++||||+++++++...+..++||||+++ +|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l 84 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DL 84 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cH
Confidence 46899999999999975 588999999876432 2345678899999999999999999999999999999999975 89
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++..... ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++.......
T Consensus 85 ~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--- 155 (284)
T cd07836 85 KKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN--- 155 (284)
T ss_pred HHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc---
Confidence 988875432 1358999999999999999999999 8999999999999999999999999999875432110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......++..|++||++.+ ..++.++|||||||++|||++|+.||......+ ....+
T Consensus 156 --------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~--~~~~~ 213 (284)
T cd07836 156 --------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED--QLLKI 213 (284)
T ss_pred --------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHH
Confidence 0112345677999998765 457899999999999999999999996543221 11111
Q ss_pred HHHHhhc--------CCcccccCcccccCC-C-----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDR--------KPMTDILDPFLAHDL-D-----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~--------~~~~~~~d~~l~~~~-~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....... ...... ........ . .+.....+.+++.+|++.||++||++.|++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 214 FRIMGTPTESTWPGISQLPEY-KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred HHHhCCCChhhHHHHhcCchh-cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1100000 000000 00000000 0 01123457799999999999999999999854
No 337
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.9e-34 Score=301.51 Aligned_cols=271 Identities=21% Similarity=0.251 Sum_probs=193.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccc--------------hHHHHHHHHHHhccCCCCcceeeEEEEecCc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQR--------------FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE 437 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 437 (686)
.+||+|+||.||+|... +++.||||.+....... ...+.+|++++++++||||+++++++...+.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 94 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF 94 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence 46999999999999865 58899999886532211 1247789999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecC
Q 042348 438 KLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 438 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
.++||||++ |+|.+++... ..+++.....++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||
T Consensus 95 ~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 95 INLVMDIMA-SDLKKVVDRK------IRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEEEEeccc-cCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEECCcc
Confidence 999999996 6999998654 358899999999999999999999 899999999999999999999999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCcc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMI 596 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~ 596 (686)
+++................. ..........++..|+|||.+.+. .++.++|||||||++|||++|+.||.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 235 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETM---------QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP 235 (335)
T ss_pred ceeecccccccccccccccc---------cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 99865422211100000000 000111233457789999998764 46899999999999999999999996
Q ss_pred ccCccchhHHHHHHHHHhhcCC--ccccc-----CcccccCCC-----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 597 QIGSMELNIVQWIQLILEDRKP--MTDIL-----DPFLAHDLD-----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----d~~l~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... +....+......... ++... .+....... .......+.+++.+||+.+|++||++.|++.+
T Consensus 236 ~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 236 GENEI--DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred CCCHH--HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 44322 112222111111000 00000 000000000 01123457899999999999999999999864
No 338
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=278.68 Aligned_cols=247 Identities=21% Similarity=0.338 Sum_probs=194.3
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEec----CceeEEEecc
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSV----DEKLLIYDYI 445 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~----~~~~lV~e~~ 445 (686)
..+||-|-.|.|-.+..+ +++.+|+|++... ....+|+++--+. .|||||.++++|... ....+|||+|
T Consensus 67 ~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~m 141 (400)
T KOG0604|consen 67 WQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECM 141 (400)
T ss_pred hhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecc
Confidence 357999999999988765 6888999998543 4567888887666 699999999998742 4568999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec---CCCCeEEeecCccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLA 522 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~~~ 522 (686)
+||.|...+.+++. ..+++.++-.|++||+.|+.|||+ .+|.||||||+|+|.. .|..+||+|||+|+.-
T Consensus 142 eGGeLfsriq~~g~----~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 142 EGGELFSRIQDRGD----QAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred cchHHHHHHHHccc----ccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEeccccccccc
Confidence 99999999998764 579999999999999999999999 8999999999999996 4567999999999853
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
... ......+-|++|.|||++...+|+..+|+||+||+||-|++|.+||.+.....
T Consensus 215 ~~~------------------------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a 270 (400)
T KOG0604|consen 215 QEP------------------------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 270 (400)
T ss_pred CCC------------------------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc
Confidence 321 11233456888999999999999999999999999999999999996654422
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.. ...-.++..+...++ +| ......+...++++.+|..+|++|.|+.|+.++
T Consensus 271 is-pgMk~rI~~gqy~FP---~p------EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 271 IS-PGMKRRIRTGQYEFP---EP------EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred CC-hhHHhHhhccCccCC---Ch------hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 11 111122222222211 11 223455677899999999999999999999876
No 339
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.1e-34 Score=303.60 Aligned_cols=265 Identities=22% Similarity=0.324 Sum_probs=191.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecC-----ceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD-----EKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.... ..++||||+
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 90 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELM 90 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhc
Confidence 46999999999999864 68899999986432 223456888999999999999999999876543 479999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
+ ++|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~-~~l~~~~~~-------~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 91 E-TDLYKLIKT-------QHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred c-cCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 6 488888754 358999999999999999999999 89999999999999999999999999998755322
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ..
T Consensus 160 ~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~ 217 (336)
T cd07849 160 HDHT--------------------GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LH 217 (336)
T ss_pred cccc--------------------CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HH
Confidence 1100 01123456788999998654 5689999999999999999999999954221 11
Q ss_pred HHHHHHHHHhhcC--CcccccCcc-------cc--cCCC----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hhc
Q 042348 605 IVQWIQLILEDRK--PMTDILDPF-------LA--HDLD----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS--LDR 667 (686)
Q Consensus 605 ~~~~~~~~~~~~~--~~~~~~d~~-------l~--~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~ 667 (686)
....+........ ....+.+.. .. .... .+....++.+++.+||+.+|++|||+.|++++ ++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 218 QLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred HHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence 1111111111000 000000000 00 0000 00123457899999999999999999999998 665
Q ss_pred ccc
Q 042348 668 VNI 670 (686)
Q Consensus 668 i~~ 670 (686)
...
T Consensus 298 ~~~ 300 (336)
T cd07849 298 YHD 300 (336)
T ss_pred cCC
Confidence 543
No 340
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=6.3e-34 Score=296.49 Aligned_cols=262 Identities=18% Similarity=0.267 Sum_probs=188.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCc--------eeEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE--------KLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--------~~lV 441 (686)
..||+|+||.||+|... +++.||||.+.... ......+.+|++++++++||||+++++++...+. .++|
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 97 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLV 97 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEE
Confidence 46999999999999875 58899999885432 1223456789999999999999999999876543 4999
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|||+. ++|.+++.... ..+++.++..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++..
T Consensus 98 ~e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 98 FEFCE-HDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGLARA 168 (310)
T ss_pred EcCCC-cCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence 99996 58888886543 358999999999999999999999 8999999999999999999999999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
......... .......++..|+|||.+.+. .++.++||||||+++|||+||+.||.....
T Consensus 169 ~~~~~~~~~-------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~ 229 (310)
T cd07865 169 FSLSKNSKP-------------------NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE 229 (310)
T ss_pred ccCCcccCC-------------------CCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 543221100 011223456789999987654 478899999999999999999999854322
Q ss_pred cchhHHHHHHHHHhhcCC--cccc-----cC---------cccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRKP--MTDI-----LD---------PFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~--~~~~-----~d---------~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+........+ .+.. .+ ...............+.+++.+||..||++|||++|++++
T Consensus 230 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 230 --QHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred --HHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 1122222222111000 0000 00 0000000000012356789999999999999999999864
No 341
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.4e-34 Score=294.69 Aligned_cols=256 Identities=22% Similarity=0.302 Sum_probs=187.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++...+..++||||++ ++
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 86 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LD 86 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-cc
Confidence 36899999999999875 678999999865422 233568899999999999999999999999999999999995 58
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-CCCeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~~~~ 528 (686)
|.+++..... ..+++..+..++.||+.||+|||+ ++++||||||+||+++. ++.+||+|||++........
T Consensus 87 l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~- 158 (294)
T PLN00009 87 LKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR- 158 (294)
T ss_pred HHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc-
Confidence 8888765432 236788889999999999999999 89999999999999985 55799999999975432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......++..|+|||++.+ ..++.++|||||||++|+|+||+.||......+ .
T Consensus 159 ----------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~--- 212 (294)
T PLN00009 159 ----------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-E--- 212 (294)
T ss_pred ----------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-H---
Confidence 0112345677999998866 457899999999999999999999995432211 1
Q ss_pred HHHHHHhh-cCCcccccC------------cccccCC---CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILED-RKPMTDILD------------PFLAHDL---DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~-~~~~~~~~d------------~~l~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+...... ..+.....+ +...... ..+.....+.+++.+|++.+|++||++.+++++
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 213 -LFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred -HHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111110 001000000 0000000 001122357789999999999999999999864
No 342
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6.9e-34 Score=299.81 Aligned_cols=283 Identities=24% Similarity=0.345 Sum_probs=199.5
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecC--ceeEEEecc
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVD--EKLLIYDYI 445 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~--~~~lV~e~~ 445 (686)
...||+|+||.||+|... +++.+|+|++... .......+.+|+.+++++ +||||+++++++...+ ..++||||+
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~ 91 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYM 91 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccc
Confidence 346999999999999876 5788999988542 223345677899999999 9999999999987543 579999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
+ ++|..++... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 92 ~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 92 E-TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred c-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 7 5999988653 47889999999999999999999 89999999999999999999999999999865422
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.... +. .......++..|+|||.+.+ ..++.++||||||+++|||+||+.||......+
T Consensus 161 ~~~~---------~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-- 220 (337)
T cd07852 161 EENP---------EN---------PVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-- 220 (337)
T ss_pred cccc---------cC---------cchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH--
Confidence 2100 00 01123456788999998754 457899999999999999999999995432211
Q ss_pred HHHHHHHHHhhcC---------C-cccccCcccccCC-----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hhc
Q 042348 605 IVQWIQLILEDRK---------P-MTDILDPFLAHDL-----DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS--LDR 667 (686)
Q Consensus 605 ~~~~~~~~~~~~~---------~-~~~~~d~~l~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~ 667 (686)
....+........ . ....++....... .......++.+++.+||+.||++|||+.+++++ ++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 221 QLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred HHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 1111100000000 0 0000000000000 000123467899999999999999999999987 666
Q ss_pred ccccch-hhhhccCCCCCC
Q 042348 668 VNISTE-QQFMKGEEPKFD 685 (686)
Q Consensus 668 i~~~~~-~~~~~~~~~~~~ 685 (686)
+....+ ....+...|+|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~ 319 (337)
T cd07852 301 FHNPSDEPVLPYPITIPLD 319 (337)
T ss_pred hccCCCCCCCCCCccCCcc
Confidence 654333 344444455554
No 343
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.1e-33 Score=286.19 Aligned_cols=247 Identities=23% Similarity=0.382 Sum_probs=197.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~ 447 (686)
+.||+|++|.||+|... ++..|++|.+..... ...+.+.+|+.++++++||||+++++.+... +..++||||+++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 85 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSG 85 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCC
Confidence 46999999999999976 688999999866532 3457899999999999999999999999988 889999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
++|.+++... ..+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||.+........
T Consensus 86 ~~L~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 86 GSLSSLLKKF------GKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999764 268999999999999999999999 8999999999999999999999999999886543221
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
. .......++..|+|||...+..++.++||||||+++|+|++|+.||..... ...
T Consensus 157 ~---------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~ 211 (260)
T cd06606 157 G---------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMA 211 (260)
T ss_pred c---------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHH
Confidence 0 001223456779999999888899999999999999999999999955431 111
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ ..... +. ......+.+++.+|++.+|++||++.|++.+
T Consensus 212 ~~~~~~~~-~~~~~-----~~-----~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 212 ALYKIGSS-GEPPE-----IP-----EHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHhcccc-CCCcC-----CC-----cccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 11111110 11111 10 1123468889999999999999999999864
No 344
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.2e-33 Score=293.88 Aligned_cols=243 Identities=23% Similarity=0.414 Sum_probs=190.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... ++..+|+|.+... .....+++.+|+++++.++|+|++++++++......++||||+. |
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 99 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G 99 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-C
Confidence 45999999999999865 5788999988642 22334568899999999999999999999999999999999996 6
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
++.+++.... ..+++.++..++.|++.||+|||+ ++++||||||+||+++.++.++|+|||++......
T Consensus 100 ~l~~~~~~~~-----~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 100 SASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred CHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 8888776443 358899999999999999999999 89999999999999999999999999998754311
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
....++..|+|||.+. ...++.++|||||||++|||++|+.||......
T Consensus 169 ------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---- 220 (308)
T cd06634 169 ------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---- 220 (308)
T ss_pred ------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH----
Confidence 1224566799999874 356788999999999999999999998543211
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
...........+ .. ........+.+++.+||+.+|++||++.+++++-..
T Consensus 221 -~~~~~~~~~~~~--~~---------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 221 -SALYHIAQNESP--AL---------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred -HHHHHHhhcCCC--Cc---------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 111122211111 00 011233457789999999999999999999987543
No 345
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-34 Score=318.16 Aligned_cols=264 Identities=20% Similarity=0.205 Sum_probs=179.9
Q ss_pred cccCccCceEEEEEEeCC--CceEEEE------------------EcCCCCccchHHHHHHHHHHhccCCCCcceeeEEE
Q 042348 373 FLLGKSTIGIVYKVALNN--EEAVAVR------------------RLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF 432 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 432 (686)
..||+|+||.||++..+. +..+++| .+.. .......+.+|+.++++++|||||++++++
T Consensus 154 ~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 232 (501)
T PHA03210 154 DDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHENILKIEEIL 232 (501)
T ss_pred eEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCCcCcEeEEE
Confidence 469999999999987542 2222222 1111 112235688999999999999999999999
Q ss_pred EecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeE
Q 042348 433 WSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512 (686)
Q Consensus 433 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 512 (686)
...+..++|+|++. ++|.+++....... .......++..|+.|++.||+|||+ ++||||||||+|||++.++.+|
T Consensus 233 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~-~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~~~~~vk 307 (501)
T PHA03210 233 RSEANTYMITQKYD-FDLYSFMYDEAFDW-KDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLNCDGKIV 307 (501)
T ss_pred EECCeeEEEEeccc-cCHHHHHhhccccc-cccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEE
Confidence 99999999999994 57877775432111 1223456678899999999999999 8999999999999999999999
Q ss_pred EeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCC
Q 042348 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592 (686)
Q Consensus 513 l~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~ 592 (686)
|+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|.
T Consensus 308 L~DFGla~~~~~~~~----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~ 365 (501)
T PHA03210 308 LGDFGTAMPFEKERE----------------------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHD 365 (501)
T ss_pred EEeCCCceecCcccc----------------------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 999999986542211 0112346788899999999999999999999999999999988
Q ss_pred CCccccC-cc-chhHHHHHHHHHhhcCCcccc-------cCc-ccccCCC-cH------HHHHHHHHHHHhccccCCCCC
Q 042348 593 LPMIQIG-SM-ELNIVQWIQLILEDRKPMTDI-------LDP-FLAHDLD-KE------DEIVSVLKIALDCVHKSPDKR 655 (686)
Q Consensus 593 ~P~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~-------~d~-~l~~~~~-~~------~~~~~l~~l~~~cl~~dP~~R 655 (686)
.++.... .. ...+.+.+.........+++. ++. .+..... .. .....+.+++.+||+.||++|
T Consensus 366 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~R 445 (501)
T PHA03210 366 FCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLR 445 (501)
T ss_pred CCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccC
Confidence 6543221 11 111211111110000000000 000 0000000 00 011246677889999999999
Q ss_pred CCHHHHHHH
Q 042348 656 PSMRHVCDS 664 (686)
Q Consensus 656 Ps~~ev~~~ 664 (686)
||+.|++++
T Consensus 446 psa~elL~h 454 (501)
T PHA03210 446 PGAAELLAL 454 (501)
T ss_pred cCHHHHhhC
Confidence 999999876
No 346
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-36 Score=279.85 Aligned_cols=252 Identities=20% Similarity=0.296 Sum_probs=192.9
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.||.|+||+|+|-.++ .|+.+|||+++.... .+.+++..|.+...+- +.||||++||.+...+..++.||.|+ .||
T Consensus 71 ~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~Sl 149 (361)
T KOG1006|consen 71 EIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-ISL 149 (361)
T ss_pred HhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhH
Confidence 3999999999998765 689999999976543 5567899999876665 78999999999999999999999994 476
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
+.+...-- ......+++.-.-.|....++||.||-+. ..|||||+||+|||+|..|.+||+|||++-.+..+-
T Consensus 150 DklYk~vy-~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si---- 222 (361)
T KOG1006|consen 150 DKLYKRVY-SVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI---- 222 (361)
T ss_pred HHHHHHHH-HHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHHH----
Confidence 65543110 00114688888888999999999999874 579999999999999999999999999987654221
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
..+...|...|||||.+.. ..|+-+|||||+|++|||+.||+.||....+ +.+.
T Consensus 223 --------------------AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----vfeq 278 (361)
T KOG1006|consen 223 --------------------AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS----VFEQ 278 (361)
T ss_pred --------------------HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----HHHH
Confidence 1123455667999998854 3489999999999999999999999965433 4444
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+..+..+..+... .+...-.....+.+++..|+.+|-.+||...++.++
T Consensus 279 l~~Vv~gdpp~l~-------~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 279 LCQVVIGDPPILL-------FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHcCCCCeec-------CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 5555555443211 111111234468889999999999999999988654
No 347
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.6e-33 Score=293.61 Aligned_cols=240 Identities=23% Similarity=0.436 Sum_probs=188.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... ++..|++|.+..... .....+.+|++++++++|||++++++++.+.+..++||||+. |
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 105 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-G 105 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-C
Confidence 35999999999999864 578899999864322 234568899999999999999999999999999999999995 5
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
++.+++.... ..+++.++..++.|++.||+|||+ ++++||||||+||++++++.+||+|||++.....
T Consensus 106 ~l~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 106 SASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 8888876543 468999999999999999999999 8999999999999999999999999998753210
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
.....++..|+|||++. ...++.++|||||||++|||++|+.||......
T Consensus 174 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~---- 226 (313)
T cd06633 174 -----------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---- 226 (313)
T ss_pred -----------------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH----
Confidence 11234567799999974 356888999999999999999999998543221
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........... ..... ......+.+++.+||+.+|++||++.+++.+
T Consensus 227 -~~~~~~~~~~~--~~~~~---------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 227 -SALYHIAQNDS--PTLQS---------NEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -HHHHHHHhcCC--CCCCc---------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11222221111 11111 1112357789999999999999999999875
No 348
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=6.3e-34 Score=292.37 Aligned_cols=258 Identities=22% Similarity=0.304 Sum_probs=193.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc--chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ--RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||.|++|.||++... +++.+++|++...... ....+.+|+.++++++|+||+++++++...+..++||||+++ +
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~ 83 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-D 83 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-C
Confidence 35899999999999875 6888999998654322 346788999999999999999999999999999999999975 8
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++.... ..+++..+..++.|++.||+|||+ ++|+|+||||+||++++++.++|+|||.+........
T Consensus 84 l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~-- 153 (283)
T cd05118 84 LYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR-- 153 (283)
T ss_pred HHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc--
Confidence 988887643 368999999999999999999999 8999999999999999999999999999875542210
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+.+. .++.++||||||+++|+|+||+.||...... +....
T Consensus 154 ---------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~--~~~~~ 210 (283)
T cd05118 154 ---------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI--DQLFK 210 (283)
T ss_pred ---------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 01123456679999998776 7899999999999999999999999543321 11111
Q ss_pred HHHHHhhcCC--cccccC------ccccc--CC----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKP--MTDILD------PFLAH--DL----DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~--~~~~~d------~~l~~--~~----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+........+ .....+ ..... .. ..+....++.+++.+||+.||.+||++.+++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 211 IFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred HHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1111000000 000000 00000 00 011234578899999999999999999999864
No 349
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.4e-34 Score=298.57 Aligned_cols=267 Identities=21% Similarity=0.274 Sum_probs=191.2
Q ss_pred cccCccCceEEEEEEeCC---CceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALNN---EEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~---~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~ 444 (686)
..||+|+||.||+|.... +..||+|.+.... ....+.+.+|+.++++++||||+++++++... +..++||||
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 85 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDY 85 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeC
Confidence 359999999999998754 7899999987632 23346678899999999999999999999988 788999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC----CCCeEEeecCccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK----NMEPHISDFGLAR 520 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~----~~~~kl~DfGla~ 520 (686)
+++ +|.+++....... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||+++
T Consensus 86 ~~~-~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 86 AEH-DLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred CCc-CHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 975 7777765432111 1368899999999999999999999 89999999999999999 8999999999998
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
........ ........++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 161 ~~~~~~~~--------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 161 LFNAPLKP--------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ccCCCccc--------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 65322110 011123456778999998766 457899999999999999999999996543
Q ss_pred ccc--------hhHHHHHHHHHhhc-------CCcccccC---cccccCCC---cH-------HHHHHHHHHHHhccccC
Q 042348 600 SME--------LNIVQWIQLILEDR-------KPMTDILD---PFLAHDLD---KE-------DEIVSVLKIALDCVHKS 651 (686)
Q Consensus 600 ~~~--------~~~~~~~~~~~~~~-------~~~~~~~d---~~l~~~~~---~~-------~~~~~l~~l~~~cl~~d 651 (686)
... ..+...+....... ....+..+ ........ .. .....+.+++.+||+.|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 300 (316)
T cd07842 221 AKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYD 300 (316)
T ss_pred ccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCC
Confidence 321 01111111100000 00000000 00000000 00 12345889999999999
Q ss_pred CCCCCCHHHHHHH
Q 042348 652 PDKRPSMRHVCDS 664 (686)
Q Consensus 652 P~~RPs~~ev~~~ 664 (686)
|++|||+.|++++
T Consensus 301 P~~Rps~~eil~~ 313 (316)
T cd07842 301 PTKRITAEEALEH 313 (316)
T ss_pred cccCcCHHHHhcC
Confidence 9999999999864
No 350
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-34 Score=319.90 Aligned_cols=269 Identities=26% Similarity=0.379 Sum_probs=207.4
Q ss_pred CcccCHHHHHHHhhcccCccCceEEEEEEeC--------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCccee
Q 042348 359 QVDFDLEQLLKASAFLLGKSTIGIVYKVALN--------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSL 428 (686)
Q Consensus 359 ~~~~~~~~l~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l 428 (686)
..+++-+.+ ...+.+|+|.||.|++|... ....||||.++... ..+.+.+..|+++|+.+ +|+||+.+
T Consensus 290 ~~e~~~~~l--~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENL--KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhc--cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 445555554 23348999999999999743 13579999998653 34567899999999999 69999999
Q ss_pred eEEEEecCceeEEEeccCCCCHHHHhhcCC---Cccc-----c--CCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCC
Q 042348 429 RAYFWSVDEKLLIYDYIPNGSLATAIHGKA---GIIS-----Y--RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498 (686)
Q Consensus 429 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~~-----~--~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDl 498 (686)
+|+|...+..++|+||+..|+|.++++..+ .... . ..++..+.+.++.|||.|++||++ .++|||||
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDL 444 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDL 444 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhh
Confidence 999999999999999999999999999876 1100 0 138999999999999999999999 89999999
Q ss_pred CCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchH
Q 042348 499 RPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDI 578 (686)
Q Consensus 499 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDV 578 (686)
.++|||+.++..+||+|||+|+.....+.... ....+ . -...|||||.+....|+.|+||
T Consensus 445 AaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~----~~~~~---------------~-LP~kWmApEsl~~~~ft~kSDV 504 (609)
T KOG0200|consen 445 AARNVLITKNKVIKIADFGLARDHYNKDYYRT----KSSAG---------------T-LPVKWMAPESLFDRVFTSKSDV 504 (609)
T ss_pred hhhhEEecCCCEEEEccccceeccCCCCceEe----cCCCC---------------c-cceeecCHHHhccCcccccchh
Confidence 99999999999999999999985543221100 00000 0 1345999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC
Q 042348 579 YSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657 (686)
Q Consensus 579 wSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 657 (686)
|||||+|||++| |..||..... ..++ ++ .++.+..+. .+..+..++.++|..||+.+|++||+
T Consensus 505 WSfGI~L~EifsLG~~PYp~~~~-~~~l---~~-~l~~G~r~~-----------~P~~c~~eiY~iM~~CW~~~p~~RP~ 568 (609)
T KOG0200|consen 505 WSFGILLWEIFTLGGTPYPGIPP-TEEL---LE-FLKEGNRME-----------QPEHCSDEIYDLMKSCWNADPEDRPT 568 (609)
T ss_pred hHHHHHHHHHhhCCCCCCCCCCc-HHHH---HH-HHhcCCCCC-----------CCCCCCHHHHHHHHHHhCCCcccCCC
Confidence 999999999999 8999954221 1122 22 222222211 11224557889999999999999999
Q ss_pred HHHHHHHHhcc
Q 042348 658 MRHVCDSLDRV 668 (686)
Q Consensus 658 ~~ev~~~L~~i 668 (686)
+.|+++.++..
T Consensus 569 F~~~~~~~~~~ 579 (609)
T KOG0200|consen 569 FSECVEFFEKH 579 (609)
T ss_pred HHHHHHHHHHH
Confidence 99999999884
No 351
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.3e-33 Score=288.86 Aligned_cols=255 Identities=22% Similarity=0.282 Sum_probs=189.6
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCc--cchHHHHHHHHHHhcc---CCCCcceeeEEEEecCc-----eeEE
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGW--QRFKEFQTEAEAIGKI---RHPNIVSLRAYFWSVDE-----KLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~-----~~lV 441 (686)
..||+|+||.||+|.... +..||+|++..... .....+.+|+.+++++ +||||+++++++...+. .+++
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~ 84 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLV 84 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEE
Confidence 468999999999999874 88999999864322 2234566788877666 59999999999998876 8999
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|||+. ++|.+++..... ..+++..++.++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++..
T Consensus 85 ~e~~~-~~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 85 FEHVD-QDLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred ehhcc-cCHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 99997 589998875432 358999999999999999999999 8999999999999999999999999999876
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
...... .....++..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~ 212 (287)
T cd07838 157 YSFEMA------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA 212 (287)
T ss_pred ccCCcc------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH
Confidence 532211 11223566799999999888999999999999999999999998543321
Q ss_pred chhHHHHHHHHHhhcCC-------cc-----cccCcccccCC--CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 602 ELNIVQWIQLILEDRKP-------MT-----DILDPFLAHDL--DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~-------~~-----~~~d~~l~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+....+...... .. ........... ........+.+++.+||+.||++||++.|++.+
T Consensus 213 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 213 -----DQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred -----HHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 112222211000 00 00000000000 001223567799999999999999999999854
No 352
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=4.6e-34 Score=300.71 Aligned_cols=259 Identities=20% Similarity=0.343 Sum_probs=190.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEe----cCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS----VDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 90 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLM 90 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehh
Confidence 36999999999999865 58899999986532 2334678889999999999999999998764 34579999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
. |+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.....
T Consensus 91 ~-~~l~~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 91 E-SDLHHIIHSD------QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred h-hhHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 5 6999998754 358999999999999999999999 89999999999999999999999999999755322
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.... ........++..|+|||.+.. ..++.++|||||||++|||++|+.||...... .
T Consensus 161 ~~~~-------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~ 219 (334)
T cd07855 161 PTEH-------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--H 219 (334)
T ss_pred CcCC-------------------CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--H
Confidence 1100 001122356778999998765 45899999999999999999999999543221 1
Q ss_pred HHHHHHHHHhhcCCcccccCcc-----------c--ccCCC----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPF-----------L--AHDLD----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~-----------l--~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+..... .+..+..+.. . ..... .......+.+++.+||+.+|++||++.+++.+
T Consensus 220 ~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 220 QLKLILSVLG--SPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HHHHHHHHhC--CChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1111111100 0000000000 0 00000 01124568899999999999999999999886
No 353
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6.4e-34 Score=294.44 Aligned_cols=248 Identities=21% Similarity=0.336 Sum_probs=188.7
Q ss_pred hcccCccCceEEEEEEeCC-CceEEEEEcCCCCc-cchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
...||+|+||.||+|...+ ++.||||.+..... ....++..|+.++.+.. ||||+++++++......++||||++ +
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~ 98 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-T 98 (296)
T ss_pred eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-c
Confidence 3479999999999999875 88999999875432 23456777888777774 9999999999999999999999985 5
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
++.+++.... ..+++..+..++.|++.||+|||+. .+|+||||+|+||++++++.+||+|||++..+.....
T Consensus 99 ~l~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~- 170 (296)
T cd06618 99 CLDKLLKRIQ-----GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA- 170 (296)
T ss_pred CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-
Confidence 7877776533 3689999999999999999999962 4899999999999999999999999999875432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC----CCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK----PTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.....++..|+|||.+.+.. ++.++||||||+++|||++|+.||......
T Consensus 171 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--- 224 (296)
T cd06618 171 -----------------------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--- 224 (296)
T ss_pred -----------------------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---
Confidence 01223566799999987553 789999999999999999999999542211
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.+..........+... .. .....++.+++.+||+.||++||++.+++++-
T Consensus 225 -~~~~~~~~~~~~~~~~--~~--------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 225 -FEVLTKILQEEPPSLP--PN--------EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred -HHHHHHHhcCCCCCCC--CC--------CCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 1112222222111100 00 01234678999999999999999999998773
No 354
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.7e-33 Score=283.68 Aligned_cols=236 Identities=25% Similarity=0.355 Sum_probs=190.5
Q ss_pred cCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 375 LGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
||+|+||.||++... +++.+++|.+..... .....+..|+.++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999876 488999999866432 2345789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--- 148 (250)
T cd05123 81 FSHLSKE------GRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--- 148 (250)
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCC---
Confidence 9999765 358999999999999999999999 8999999999999999999999999999876532210
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......++..|+|||...+...+.++|+||||+++||+++|+.||..... .....
T Consensus 149 --------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~ 203 (250)
T cd05123 149 --------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYE 203 (250)
T ss_pred --------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHH
Confidence 01223456679999999888889999999999999999999999954322 22222
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRH 660 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 660 (686)
.......+.+... ...+.+++.+||..||++||++.+
T Consensus 204 ~~~~~~~~~~~~~-------------~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 204 KILKDPLRFPEFL-------------SPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHhcCCCCCCCCC-------------CHHHHHHHHHHhcCCHhhCCCccc
Confidence 3222222222111 235778999999999999999943
No 355
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.2e-34 Score=299.09 Aligned_cols=267 Identities=20% Similarity=0.316 Sum_probs=195.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec-----CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-----DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lV~e~ 444 (686)
..||+|+||.||+|... ++..||||.+... .......+.+|+.++++++||||+++++++... ...++||||
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~ 90 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYEL 90 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeC
Confidence 36999999999999864 5889999998653 223345678899999999999999999988654 347999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+. ++|.+++... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++....
T Consensus 91 ~~-~~L~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 91 MD-TDLHQIIRSS------QTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred CC-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 95 6899888754 358999999999999999999999 8999999999999999999999999999975432
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... ......++..|+|||.+.. ..++.++|||||||++|+|++|+.||..... .
T Consensus 161 ~~~-----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~ 215 (337)
T cd07858 161 KGD-----------------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY--V 215 (337)
T ss_pred Ccc-----------------------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh--H
Confidence 110 0112345667999998764 4689999999999999999999999954321 1
Q ss_pred hHHHHHHHHHhhcCC--c---------------ccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--
Q 042348 604 NIVQWIQLILEDRKP--M---------------TDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS-- 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~--~---------------~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~-- 664 (686)
.....+........+ . ....++.... ..+.....+.+++.+||+.+|++|||++|++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~ 293 (337)
T cd07858 216 HQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFAR--LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY 293 (337)
T ss_pred HHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHH--HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence 111111111110000 0 0000000000 001233467899999999999999999999998
Q ss_pred Hhcccccchhhh
Q 042348 665 LDRVNISTEQQF 676 (686)
Q Consensus 665 L~~i~~~~~~~~ 676 (686)
++.+.......+
T Consensus 294 ~~~~~~~~~~~~ 305 (337)
T cd07858 294 LASLHDPSDEPV 305 (337)
T ss_pred hhhhcCcccCcc
Confidence 777665544333
No 356
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.4e-33 Score=285.27 Aligned_cols=245 Identities=24% Similarity=0.350 Sum_probs=195.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|++|.||++... +++.+++|.+.... .....++.+|++++++++|+||+++++++......++||||+++++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGD 85 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCC
Confidence 46999999999999765 57889999986532 2334578899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++...... ...+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||+++......
T Consensus 86 L~~~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~--- 157 (256)
T cd08530 86 LSKAISKRKKK--RKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM--- 157 (256)
T ss_pred HHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccCC---
Confidence 99998763211 1468999999999999999999999 899999999999999999999999999997654321
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.....++..|+|||...+..++.++|+||||+++|||++|+.||...... ...
T Consensus 158 ----------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-----~~~ 210 (256)
T cd08530 158 ----------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-----DLR 210 (256)
T ss_pred ----------------------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 01123566799999998888999999999999999999999999543221 111
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....... .... .......+.+++.+|++.+|++||++.|++++
T Consensus 211 ~~~~~~~--~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 211 YKVQRGK--YPPI----------PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHHhcCC--CCCC----------chhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1211111 1111 11234568899999999999999999999865
No 357
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.8e-33 Score=295.88 Aligned_cols=264 Identities=23% Similarity=0.335 Sum_probs=198.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecC-----ceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD-----EKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lV~e~ 444 (686)
..||+|++|.||+|... ++..||||++.... ....+.+.+|+.++++++||||+++++++...+ ..++||||
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~ 85 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTEL 85 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecc
Confidence 46999999999999976 48899999987643 334567899999999999999999999998775 78999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
++ ++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.++|+|||++.....
T Consensus 86 ~~-~~l~~~l~~~------~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 86 ME-TDLHKVIKSP------QPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred hh-hhHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 97 5899988754 368999999999999999999999 8999999999999999999999999999986543
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
..... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+
T Consensus 156 ~~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~- 214 (330)
T cd07834 156 DEDEK--------------------GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID- 214 (330)
T ss_pred ccccc--------------------ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH-
Confidence 21100 011233457779999999877 78999999999999999999999995543211
Q ss_pred hHHHHHHHHHhhcC-CcccccC----cc----cc---cCC--C----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH-
Q 042348 604 NIVQWIQLILEDRK-PMTDILD----PF----LA---HDL--D----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS- 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~-~~~~~~d----~~----l~---~~~--~----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~- 664 (686)
....+..... +..+... .. +. ... . .......+.+++.+||+.+|++||++.+++++
T Consensus 215 ----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 215 ----QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred ----HHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 1111111100 0000000 00 00 000 0 01123467899999999999999999999986
Q ss_pred -Hhccccc
Q 042348 665 -LDRVNIS 671 (686)
Q Consensus 665 -L~~i~~~ 671 (686)
++.++..
T Consensus 291 ~~~~~~~~ 298 (330)
T cd07834 291 YLAQLHDP 298 (330)
T ss_pred cHHhhccc
Confidence 6666543
No 358
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.1e-33 Score=284.31 Aligned_cols=247 Identities=21% Similarity=0.328 Sum_probs=189.7
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCC-----CccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-----GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e 443 (686)
.+.||+|+||.||+|... ++..||+|.+... .......+.+|++++++++|+||+++++++.+. +..++|||
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVE 86 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEE
Confidence 347999999999999865 5889999987432 123345788999999999999999999998765 35789999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++++|.+++... ..+++..+.+++.|++.||+|||+ .+++||||||+||+++.++.++|+|||+++...
T Consensus 87 ~~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 87 YMPGGSIKDQLKAY------GALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred eCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 99999999998754 347889999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
...... .......++..|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus 158 ~~~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-- 215 (264)
T cd06653 158 TICMSG--------------------TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM-- 215 (264)
T ss_pred cccccC--------------------ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH--
Confidence 211000 0112234677899999998888899999999999999999999999543211
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+...... +....+.+ .....+.+++.+|++ +|.+||++.+++.+
T Consensus 216 ---~~~~~~~~~--~~~~~~p~---------~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 216 ---AAIFKIATQ--PTKPMLPD---------GVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ---HHHHHHHcC--CCCCCCCc---------ccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 112222111 11111111 122457789999999 57999999998764
No 359
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.3e-33 Score=290.04 Aligned_cols=258 Identities=24% Similarity=0.369 Sum_probs=190.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|++|.||+|... +++.|+||++..... .......+|+..+++++ ||||+++++++...+..++||||+ +|+
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 83 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGN 83 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCC
Confidence 46999999999999986 478899999865422 22234567999999998 999999999999999999999999 889
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++....+ ..+++..+..++.|++.||+|||+ ++++|+||||+||++++++.++|+|||+++......
T Consensus 84 l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 84 LYQLMKDRKG----KPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred HHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 9999876542 368999999999999999999999 899999999999999999999999999987543211
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCccccc-CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||++. ...++.++||||||+++|||++|+.||......+ ....
T Consensus 154 ---------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~--~~~~ 210 (283)
T cd07830 154 ---------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID--QLYK 210 (283)
T ss_pred ---------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH--HHHH
Confidence 011234567799999874 4557999999999999999999999985432211 1111
Q ss_pred HHHHHhhc--------CCcccccCcccccCCC------cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDR--------KPMTDILDPFLAHDLD------KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~--------~~~~~~~d~~l~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ .......+..+..... .......+.+++.+||+.+|++||+++|++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 211 ICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred HHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 11100000 0000000000000000 00113468899999999999999999999764
No 360
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.4e-33 Score=289.17 Aligned_cols=262 Identities=21% Similarity=0.293 Sum_probs=197.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||++... ++..||+|.+... .....+.+.+|++++++++ ||||+++++++...+..++||||+++
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPN 86 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCC
Confidence 35899999999999875 6889999998653 2233466889999999998 99999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
++|.+++... ..+++..+..|+.|++.||+|||+ .+++|+||||+||+++.++.++++|||++........
T Consensus 87 ~~L~~~l~~~------~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 87 GELLQYIRKY------GSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 9999999765 358999999999999999999999 8999999999999999999999999999986543221
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......... .................++..|+|||......++.++||||||++++++++|+.||..... ..
T Consensus 158 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~ 229 (280)
T cd05581 158 PESNKGDAT---NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-----YL 229 (280)
T ss_pred cccCCCCCc---cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH-----HH
Confidence 100000000 0000000111222344567889999998888899999999999999999999999954331 11
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH----HHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM----RHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~----~ev~~~ 664 (686)
..+.........+.. ....+.+++.+||+.+|++||++ +|++++
T Consensus 230 ~~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 230 TFQKILKLEYSFPPN-------------FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHhcCCCCCCc-------------cCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 122222222111111 12357799999999999999999 777653
No 361
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.4e-33 Score=283.58 Aligned_cols=247 Identities=21% Similarity=0.393 Sum_probs=197.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||++... ++..+++|++..... ...+.+.+|++++++++|||++++++.+...+..++|+||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~ 85 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGD 85 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCc
Confidence 46899999999999876 578999999876433 445678999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++..... ....+++..+..++.+++.||+|||+ .+++|+||+|+||++++++.++|+|||.+........
T Consensus 86 L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-- 158 (258)
T cd08215 86 LSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD-- 158 (258)
T ss_pred HHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCcc--
Confidence 9999986531 11468999999999999999999999 8999999999999999999999999999875532210
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......++..|+|||...+..++.++||||+|+++|+|++|+.||.... ..+..
T Consensus 159 ---------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~ 212 (258)
T cd08215 159 ---------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELA 212 (258)
T ss_pred ---------------------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHH
Confidence 0112345667999999988889999999999999999999999984432 12222
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....... ... +.. .....+.+++.+||..+|++||++.|++++
T Consensus 213 ~~~~~~~--~~~-----~~~-----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 213 LKILKGQ--YPP-----IPS-----QYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHhcCC--CCC-----CCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2222211 111 110 122457889999999999999999999864
No 362
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.8e-33 Score=290.49 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=189.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecC----------cee
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD----------EKL 439 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----------~~~ 439 (686)
..||+|+||.||+|... +++.||+|+++... ......+.+|++++++++||||+++++++.+.. ..+
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 92 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFY 92 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEE
Confidence 46999999999999976 47899999986532 222356788999999999999999999987654 789
Q ss_pred EEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcc
Q 042348 440 LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA 519 (686)
Q Consensus 440 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 519 (686)
+|+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 93 lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 93 LVFEYMDH-DLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred EEEcccCc-cHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeCccccc
Confidence 99999976 7777776542 358999999999999999999999 89999999999999999999999999999
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCcccc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQI 598 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~ 598 (686)
......... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~~~~~~----------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~ 221 (302)
T cd07864 164 RLYNSEESR----------------------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQAN 221 (302)
T ss_pred ccccCCccc----------------------ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 765432110 0011234567999998764 45789999999999999999999999543
Q ss_pred CccchhHHHHHHHHHhhcCC--ccccc--------Cccccc--C--CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 599 GSMELNIVQWIQLILEDRKP--MTDIL--------DPFLAH--D--LDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~--~~~~~--------d~~l~~--~--~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.. ......+........+ .+++. ++.... . .........+.+++.+||+.+|++||++.+++++
T Consensus 222 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 222 QE--LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred Ch--HHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 21 1222222222211110 00000 000000 0 0000123468899999999999999999999864
No 363
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.7e-33 Score=297.25 Aligned_cols=255 Identities=24% Similarity=0.337 Sum_probs=187.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lV~e 443 (686)
..||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++.... ..++|+|
T Consensus 21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 100 (342)
T cd07879 21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMP 100 (342)
T ss_pred EEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEec
Confidence 46999999999999864 68899999986532 222356889999999999999999999987543 4589999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+.. +|..++. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~~~~-~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 101 YMQT-DLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred cccc-CHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 9964 7777652 348899999999999999999999 899999999999999999999999999987432
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.. .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......
T Consensus 169 ~~--------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~- 221 (342)
T cd07879 169 AE--------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL- 221 (342)
T ss_pred CC--------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 11 012345667999999866 46899999999999999999999999543211
Q ss_pred hhHHHHHHHHHhhcC-Ccccc------------cC--ccc-ccCCC--cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRK-PMTDI------------LD--PFL-AHDLD--KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~-~~~~~------------~d--~~l-~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. .+..+..... +.+.. .. +.. ..... .+.....+.+++.+||+.||++||++.|++.+
T Consensus 222 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 222 -D---QLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred -H---HHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1111111000 00000 00 000 00000 00122357799999999999999999999976
Q ss_pred --Hhcccc
Q 042348 665 --LDRVNI 670 (686)
Q Consensus 665 --L~~i~~ 670 (686)
++.++.
T Consensus 298 ~~f~~~~~ 305 (342)
T cd07879 298 PYFDSFRD 305 (342)
T ss_pred cchhhccc
Confidence 666654
No 364
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.8e-33 Score=286.41 Aligned_cols=258 Identities=26% Similarity=0.343 Sum_probs=192.6
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|++|.||+|...+ ++.||+|.+.... ....+.+..|+.++++++|+||+++++++.+.+..++||||++ ++
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~ 83 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MD 83 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cC
Confidence 358999999999998764 8899999987653 2334678899999999999999999999999999999999997 59
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||+|+||++++++.+||+|||+++.......
T Consensus 84 l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 84 LKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred HHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 999998653 358999999999999999999999 8999999999999999999999999999875432110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+.+. .++.++|||||||++||+++|+.||...... .....
T Consensus 154 ---------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~ 210 (282)
T cd07829 154 ---------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--DQLFK 210 (282)
T ss_pred ---------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHHH
Confidence 01122335669999998766 7899999999999999999999998543211 11111
Q ss_pred HHHHHhhcC--------Cc---ccccCcccccCC--CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRK--------PM---TDILDPFLAHDL--DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~--------~~---~~~~d~~l~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+........ .. ...+........ ..+.....+.+++.+||+.+|++||++.+++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 211 IFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred HHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 111111000 00 000000000000 000113468899999999999999999999864
No 365
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=248.13 Aligned_cols=254 Identities=21% Similarity=0.286 Sum_probs=190.2
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.||+|.||+||||+.. +++.||+|+++-.+ ..-.....+||-+++.++|+|||++++....++...+|+|||. .+|
T Consensus 9 kigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd-qdl 87 (292)
T KOG0662|consen 9 KIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDL 87 (292)
T ss_pred hhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-HHH
Confidence 5999999999999855 57899999986542 2334678999999999999999999999999999999999995 489
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
..+...-. ..++.+.+..++.|+++||.|+|+ +++.|||+||.|.||+.+|+.|++|||+|+.+..
T Consensus 88 kkyfdsln-----g~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgi------ 153 (292)
T KOG0662|consen 88 KKYFDSLN-----GDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGI------ 153 (292)
T ss_pred HHHHHhcC-----CcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCC------
Confidence 99887765 358889999999999999999999 8999999999999999999999999999985532
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCC-CCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~ 608 (686)
|. ...+..+-|.+|++|.++.+.+ |++..|+||-||++.|+.. |++-|.+. +- .+.
T Consensus 154 ----------pv-------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~-dv----ddq 211 (292)
T KOG0662|consen 154 ----------PV-------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DV----DDQ 211 (292)
T ss_pred ----------ce-------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC-cH----HHH
Confidence 11 1223445688999999998754 8999999999999999998 55445322 11 122
Q ss_pred HHHHHhhc--------CCcccccCcccccCCC----cHHHH----HHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDR--------KPMTDILDPFLAHDLD----KEDEI----VSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~--------~~~~~~~d~~l~~~~~----~~~~~----~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+.+...- ..+....|...-..+. ..... ..-.+++.+.+.-+|.+|.++++.+++
T Consensus 212 lkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 212 LKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred HHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 22222211 1111222221111111 11111 123477888888999999999988765
No 366
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=3.3e-33 Score=295.08 Aligned_cols=250 Identities=20% Similarity=0.256 Sum_probs=185.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lV~e 443 (686)
..||+|+||.||++... ++..||||++.... ......+.+|++++++++||||+++++++.... ..++|||
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 100 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMP 100 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEe
Confidence 36999999999999854 68899999986432 222356889999999999999999999987654 3589999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+ +++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++....
T Consensus 101 ~~-~~~l~~~~~~-------~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 101 FM-GTDLGKLMKH-------EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred cC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 99 7799988864 358999999999999999999999 899999999999999999999999999987543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
... ....++..|+|||.+.+ ..++.++|||||||++|++++|+.||......
T Consensus 170 ~~~--------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~- 222 (343)
T cd07880 170 SEM--------------------------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL- 222 (343)
T ss_pred cCc--------------------------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 111 12234667999998865 45889999999999999999999999543221
Q ss_pred hhHHHHHHHHHhhcCCcccccCcc---------------cc-cCC--CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPF---------------LA-HDL--DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~---------------l~-~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+..........+... .. ... ........+.+++.+|++.||++|||+.+++++
T Consensus 223 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 223 ----DQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred ----HHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111111100000000000 00 000 001122357899999999999999999999854
No 367
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-34 Score=313.78 Aligned_cols=246 Identities=21% Similarity=0.262 Sum_probs=198.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.+||+|+||.|..++++ +++.+|+|++.+... .+..-|..|-.+|..-+.+.||.++-.|.+.++.|+|||||+||
T Consensus 81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGG 160 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGG 160 (1317)
T ss_pred HHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCc
Confidence 47999999999999976 578899999977322 33356889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
||-.++.... ++++..+.-++..|+.||.-||+ .|+|||||||+|||+|.+|++||+|||.+-.+..++.
T Consensus 161 DlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~- 230 (1317)
T KOG0612|consen 161 DLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT- 230 (1317)
T ss_pred hHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchhHHhcCCCCc-
Confidence 9999997653 58899899999999999999999 8999999999999999999999999999876653332
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
-.....+||+.|++||++.. +.|++.+|.||+||++|||+.|..||.. .
T Consensus 231 ---------------------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-----d 284 (1317)
T KOG0612|consen 231 ---------------------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-----D 284 (1317)
T ss_pred ---------------------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-----H
Confidence 12345688999999998742 5689999999999999999999999943 3
Q ss_pred hHHHHHHHHHhhcCC--cccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC---HHHHHHHHh
Q 042348 604 NIVQWIQLILEDRKP--MTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS---MRHVCDSLD 666 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ev~~~L~ 666 (686)
.+++-+..+...+.. +++.. +...+..+|+.+.+ -+|+.|-. +.++-.|--
T Consensus 285 slveTY~KIm~hk~~l~FP~~~-----------~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpF 340 (1317)
T KOG0612|consen 285 SLVETYGKIMNHKESLSFPDET-----------DVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPF 340 (1317)
T ss_pred HHHHHHHHHhchhhhcCCCccc-----------ccCHHHHHHHHHHh-cChhhhcccccHHHHHhCcc
Confidence 455556666554221 11111 12334556666654 57888887 999888753
No 368
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=5.2e-33 Score=289.72 Aligned_cols=267 Identities=21% Similarity=0.256 Sum_probs=188.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecC--------ceeEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD--------EKLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--------~~~lV 441 (686)
..||+|+||.||+|... +++.+|+|++..... .....+.+|++++++++||||+++++++.... ..++|
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv 93 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMV 93 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEE
Confidence 36999999999999865 578899998854322 12346788999999999999999999876543 35999
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|||+.+ +|...+.... ..+++..+..++.|+++||+|||+ ++|+||||||+||++++++.++|+|||+++.
T Consensus 94 ~~~~~~-~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 94 TPYMDH-DLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred EecCCc-CHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 999964 7877776543 358999999999999999999999 8999999999999999999999999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
.......... + ............++..|+|||.+.+ ..++.++|||||||++|||++|+.||.....
T Consensus 165 ~~~~~~~~~~-------~-----~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~ 232 (311)
T cd07866 165 YDGPPPNPKG-------G-----GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD 232 (311)
T ss_pred ccCCCccccc-------C-----CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence 5432211000 0 0000112234466788999998765 4578999999999999999999999954332
Q ss_pred cchhHHHHHHHHHhhcCC--------ccccc--------CcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRKP--------MTDIL--------DPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~--------~~~~~--------d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. ...+.+........+ ..... .+.+.... ......+.+++.+||+.||++|||+.|++.+
T Consensus 233 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 233 I--DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF--GKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred H--HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHc--ccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1 111111111110000 00000 00000000 0112457899999999999999999999764
No 369
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.4e-33 Score=283.25 Aligned_cols=246 Identities=27% Similarity=0.357 Sum_probs=187.4
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCC---C--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGN---G--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~---~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||++.... +..+++|.++. . ......++..|+.++++++||||+++++++.+.+..++||||++
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCE 85 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCC
Confidence 469999999999998654 33455555432 1 12233467789999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+++|.+++...... ...+++.+++.++.|++.||+|||+ .+++|+||||+||++++ +.++|+|||+++......
T Consensus 86 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 86 GRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred CCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 99999998753211 1468999999999999999999999 89999999999999975 569999999987653211
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
. ......++..|+|||...+..++.++||||||+++|+|++|..||.... ..
T Consensus 160 ~-----------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~ 211 (260)
T cd08222 160 D-----------------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FL 211 (260)
T ss_pred c-----------------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HH
Confidence 1 0112345667999999988888999999999999999999999984321 22
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...........+ . . ......++.+++.+||+.+|++||++.|++++
T Consensus 212 ~~~~~~~~~~~~--~-----~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 212 SVVLRIVEGPTP--S-----L-----PETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHHcCCCC--C-----C-----cchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 222222222111 1 0 11233467889999999999999999999864
No 370
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1e-32 Score=313.68 Aligned_cols=141 Identities=23% Similarity=0.396 Sum_probs=126.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||++..... .....+..|+.+++.++||||+++++++...+..++||||++++
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~ 89 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGG 89 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCC
Confidence 36999999999999876 588999999865422 22467889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
+|.+++... ..+++..++.|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++..
T Consensus 90 ~L~~li~~~------~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 90 DVKSLLHIY------GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCccc
Confidence 999999754 357889999999999999999999 89999999999999999999999999999743
No 371
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=6.1e-33 Score=291.91 Aligned_cols=259 Identities=23% Similarity=0.283 Sum_probs=186.5
Q ss_pred cccCccCceEEEEEEeC-C--CceEEEEEcCCC--CccchHHHHHHHHHHhcc-CCCCcceeeEEEEec----CceeEEE
Q 042348 373 FLLGKSTIGIVYKVALN-N--EEAVAVRRLGNG--GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSV----DEKLLIY 442 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~----~~~~lV~ 442 (686)
..||+|+||.||++... . +..||+|++... .....+.+.+|+++++++ +||||+++++++... ...++++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 85 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYE 85 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEE
Confidence 46999999999999865 3 678999998643 222245688899999999 599999999976433 4568899
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
||+. ++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 86 e~~~-~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 86 ELME-ADLHQIIRSG------QPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred eccc-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 9985 6999998654 458999999999999999999999 89999999999999999999999999999865
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
....... ........||..|+|||++.+ ..++.++|||||||++|+|++|+.||......
T Consensus 156 ~~~~~~~-------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~ 216 (332)
T cd07857 156 SENPGEN-------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV 216 (332)
T ss_pred ccccccc-------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH
Confidence 4221100 001123457788999998765 46899999999999999999999998543211
Q ss_pred chhHHHHHHHHHhhcC-----------------CcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 602 ELNIVQWIQLILEDRK-----------------PMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~-----------------~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+........ .....-...+... .......+.+++.+|++.||++|||+.|++.+
T Consensus 217 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 217 --DQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESI--FPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred --HHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhh--CCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11111111100000 0000000000000 00113467899999999999999999999765
No 372
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.3e-33 Score=293.45 Aligned_cols=255 Identities=23% Similarity=0.356 Sum_probs=185.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEec--------------Cc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--------------DE 437 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------------~~ 437 (686)
..||.|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++... ..
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNS 90 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccce
Confidence 46999999999999865 5789999998766555567789999999999999999999876654 34
Q ss_pred eeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec-CCCCeEEeec
Q 042348 438 KLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG-KNMEPHISDF 516 (686)
Q Consensus 438 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~Df 516 (686)
.++||||++ ++|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++ +++.+|++||
T Consensus 91 ~~lv~e~~~-~~L~~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 91 VYIVQEYME-TDLANVLEQ-------GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred EEEEeeccc-ccHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEECCc
Confidence 689999997 599888853 248899999999999999999999 8999999999999997 4567899999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
|+++......... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||
T Consensus 160 g~~~~~~~~~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf 219 (342)
T cd07854 160 GLARIVDPHYSHK--------------------GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLF 219 (342)
T ss_pred ccceecCCccccc--------------------cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCC
Confidence 9987543211000 01112345777999997654 56889999999999999999999999
Q ss_pred cccCccchhHHHHHHHHHhhcCCccc---------ccCcccc-----cCCCc----HHHHHHHHHHHHhccccCCCCCCC
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTD---------ILDPFLA-----HDLDK----EDEIVSVLKIALDCVHKSPDKRPS 657 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~d~~l~-----~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs 657 (686)
......+. ........ +... ....... ..... .....++.+++.+||+.||++|||
T Consensus 220 ~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 293 (342)
T cd07854 220 AGAHELEQ-----MQLILESV-PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLT 293 (342)
T ss_pred CCCCHHHH-----HHHHHHhc-CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccC
Confidence 54332111 11111100 0000 0000000 00000 012245778999999999999999
Q ss_pred HHHHHHH
Q 042348 658 MRHVCDS 664 (686)
Q Consensus 658 ~~ev~~~ 664 (686)
+.|++.+
T Consensus 294 ~~ell~h 300 (342)
T cd07854 294 AEEALMH 300 (342)
T ss_pred HHHHhCC
Confidence 9999865
No 373
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1e-32 Score=289.22 Aligned_cols=259 Identities=24% Similarity=0.347 Sum_probs=188.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEe-cCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS-VDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... ++..||||++... .....+.+.+|++++++++||||+++++++.. .+..++||||+ ++
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~ 94 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GT 94 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-cc
Confidence 46999999999999865 6889999987542 22234678899999999999999999999876 45789999999 56
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.++++.. .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||.++.....
T Consensus 95 ~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~--- 161 (328)
T cd07856 95 DLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ--- 161 (328)
T ss_pred CHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccccccCCC---
Confidence 999888642 47888889999999999999999 89999999999999999999999999998743211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ....
T Consensus 162 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--~~~~ 216 (328)
T cd07856 162 -----------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--NQFS 216 (328)
T ss_pred -----------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence 012244667999998765 56899999999999999999999999543221 1111
Q ss_pred HHHHHHhhc----------CCcccccCcc-cccCCCc----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hhcccc
Q 042348 608 WIQLILEDR----------KPMTDILDPF-LAHDLDK----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS--LDRVNI 670 (686)
Q Consensus 608 ~~~~~~~~~----------~~~~~~~d~~-l~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~i~~ 670 (686)
.+....... ....+.+... ....... +.....+.+++.+||+.+|++||++.+++.+ ++..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~ 296 (328)
T cd07856 217 IITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHD 296 (328)
T ss_pred HHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccC
Confidence 111110000 0000000000 0000000 0123468899999999999999999999877 544443
No 374
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=8.6e-33 Score=292.10 Aligned_cols=251 Identities=21% Similarity=0.318 Sum_probs=184.4
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEec------CceeEEEe
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV------DEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lV~e 443 (686)
..||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++... ...+++++
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~ 102 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 102 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEeh
Confidence 3599999999999985 468899999987532 22345688899999999999999999988643 34678888
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
++ +++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 103 ~~-~~~L~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 103 LM-GADLNNIVKC-------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred hc-ccCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 87 7899988864 248999999999999999999999 899999999999999999999999999987432
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.. .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 172 ~~--------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~ 225 (345)
T cd07877 172 DE--------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 225 (345)
T ss_pred cc--------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 11 112345677999998765 568899999999999999999999995432211
Q ss_pred hhHHHHHHHHHhhcCCcccccC---------------cccccCCC--cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILD---------------PFLAHDLD--KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d---------------~~l~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+ ..+..... .+...... ........ .......+.+++.+|++.||++||++.+++++
T Consensus 226 -~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 226 -QL-KLILRLVG--TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred -HH-HHHHHHhC--CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 11 11111000 00000000 00000000 00112357799999999999999999999877
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=5.2e-33 Score=277.71 Aligned_cols=220 Identities=21% Similarity=0.237 Sum_probs=173.4
Q ss_pred cCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHHHhhc
Q 042348 378 STIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHG 456 (686)
Q Consensus 378 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 456 (686)
|.+|.||++... +++.+|+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999875 57899999986642 234556666666799999999999999999999999999999999875
Q ss_pred CCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccccccc
Q 042348 457 KAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQS 536 (686)
Q Consensus 457 ~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 536 (686)
. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.++++|||.+.......
T Consensus 79 ~------~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---------- 139 (237)
T cd05576 79 F------LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---------- 139 (237)
T ss_pred h------cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc----------
Confidence 4 348999999999999999999999 899999999999999999999999999876443211
Q ss_pred ccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhc
Q 042348 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDR 616 (686)
Q Consensus 537 ~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 616 (686)
....++..|+|||...+..++.++||||+|+++|||++|+.|+....... ...
T Consensus 140 ----------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----------~~~ 192 (237)
T cd05576 140 ----------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-----------NTH 192 (237)
T ss_pred ----------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----------ccc
Confidence 11223456999999988889999999999999999999998873211100 000
Q ss_pred CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 042348 617 KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659 (686)
Q Consensus 617 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 659 (686)
.. . .+. ......+.+++.+|++.||++||++.
T Consensus 193 ~~---~---~~~-----~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 193 TT---L---NIP-----EWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred cc---c---CCc-----ccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 00 0 000 01123577899999999999999973
No 376
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-34 Score=268.17 Aligned_cols=262 Identities=19% Similarity=0.300 Sum_probs=194.4
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec--------CceeEEE
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--------DEKLLIY 442 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------~~~~lV~ 442 (686)
.||+|.||+||+|+.. +++.||+|++-.. ...-.....+|+++|..++|+|++.++..|... ...++||
T Consensus 24 kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf 103 (376)
T KOG0669|consen 24 KIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVF 103 (376)
T ss_pred hcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeH
Confidence 5999999999999865 4777888865321 112234578999999999999999999988643 2369999
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
++|+. +|..++.... ..++..++.+++.++..||.|+|. ..|+|||+||+|+||+.++.+||+|||+|+.+
T Consensus 104 ~~ceh-DLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 104 DFCEH-DLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred HHhhh-hHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 99976 9999997654 468999999999999999999999 89999999999999999999999999999876
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
...+.... ...+..+-|.+|++||.+.+ ..|+++.|||+-||||.||.||.+-+.+. .
T Consensus 175 s~~~n~~k-------------------prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgn--t 233 (376)
T KOG0669|consen 175 STSKNVVK-------------------PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGN--T 233 (376)
T ss_pred ecccccCC-------------------CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCC--h
Confidence 54332110 12345667899999998876 56999999999999999999999877432 3
Q ss_pred chhHHHHHHHHHhhc--CCcccccC----------cccccCCC-cHHHHH------HHHHHHHhccccCCCCCCCHHHHH
Q 042348 602 ELNIVQWIQLILEDR--KPMTDILD----------PFLAHDLD-KEDEIV------SVLKIALDCVHKSPDKRPSMRHVC 662 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~--~~~~~~~d----------~~l~~~~~-~~~~~~------~l~~l~~~cl~~dP~~RPs~~ev~ 662 (686)
+......+....... ..++++.. |-..+... .++.+. ...+++..++..||.+|+++.+++
T Consensus 234 eqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 234 EQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred HHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 333344444443321 11111111 10000000 011111 467899999999999999999998
Q ss_pred HHH
Q 042348 663 DSL 665 (686)
Q Consensus 663 ~~L 665 (686)
.+-
T Consensus 314 nh~ 316 (376)
T KOG0669|consen 314 NHD 316 (376)
T ss_pred chh
Confidence 774
No 377
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-34 Score=287.71 Aligned_cols=255 Identities=21% Similarity=0.292 Sum_probs=196.9
Q ss_pred cCHHHHHHHh-hcccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCc
Q 042348 362 FDLEQLLKAS-AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE 437 (686)
Q Consensus 362 ~~~~~l~~~~-~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 437 (686)
.++.++.+.. .++||+|.||+||-|..+ +|+.||||.+.+.. .....++.+|+.||++++||.||.+...|+..+.
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER 637 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce
Confidence 3444444432 578999999999999865 69999999987642 2233678999999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC---CCeEEe
Q 042348 438 KLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN---MEPHIS 514 (686)
Q Consensus 438 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl~ 514 (686)
.|+|||-+.|.-|+-+|.... ..|++..-+-++.||+.||.|||. ++|+|+||||+|||+.+. -++||+
T Consensus 638 vFVVMEKl~GDMLEMILSsEk-----gRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 638 VFVVMEKLHGDMLEMILSSEK-----GRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred EEEEehhhcchHHHHHHHhhc-----ccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeec
Confidence 999999995433444444433 468888888999999999999999 999999999999999643 379999
Q ss_pred ecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCC
Q 042348 515 DFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594 (686)
Q Consensus 515 DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P 594 (686)
|||.|+++.... ...+.+||+.|.|||++....|+..-|+||.|||+|--++|..|
T Consensus 710 DFGfARiIgEks------------------------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFP 765 (888)
T KOG4236|consen 710 DFGFARIIGEKS------------------------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFP 765 (888)
T ss_pred cccceeecchhh------------------------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEeccccc
Confidence 999999876432 23456788889999999999999999999999999999999999
Q ss_pred ccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
|- ++.++-+.++....-- . .....+.....++++...|+..-.+|-|..+-+.+
T Consensus 766 FN----EdEdIndQIQNAaFMy-------P-----p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 766 FN----EDEDINDQIQNAAFMY-------P-----PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred CC----CccchhHHhhcccccc-------C-----CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 93 2334444333321110 0 01122333457788888888888899888765544
No 378
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.3e-33 Score=293.56 Aligned_cols=248 Identities=21% Similarity=0.309 Sum_probs=187.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCc------eeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE------KLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~lV~e 443 (686)
..||+|++|.||+|... ++..||||++... .....+.+.+|+.++++++||||+++++++...+. .++|+|
T Consensus 21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 100 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTH 100 (343)
T ss_pred EEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEe
Confidence 46999999999999876 5788999998653 22234567789999999999999999998876654 899999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+ +++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||++....
T Consensus 101 ~~-~~~L~~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 101 LM-GADLNNIVKC-------QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred cC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 99 6799998864 358999999999999999999999 899999999999999999999999999987543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.. .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......
T Consensus 170 ~~--------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~- 222 (343)
T cd07851 170 DE--------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI- 222 (343)
T ss_pred cc--------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-
Confidence 11 112345667999998755 46789999999999999999999999543221
Q ss_pred hhHHHHHHHHHhhcCCcc-cccC-------------------cccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMT-DILD-------------------PFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC 662 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~-~~~d-------------------~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 662 (686)
..+..+........ ...+ +...... ......+.+++.+||+.+|++|||+.||+
T Consensus 223 ----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~l~dli~~~l~~~P~~Rpt~~ell 296 (343)
T cd07851 223 ----DQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVF--SGANPLAIDLLEKMLVLDPDKRITAAEAL 296 (343)
T ss_pred ----HHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHh--ccCCHHHHHHHHHhCCCChhhCCCHHHHh
Confidence 11111111110000 0000 0000000 01234688999999999999999999998
Q ss_pred HH
Q 042348 663 DS 664 (686)
Q Consensus 663 ~~ 664 (686)
++
T Consensus 297 ~h 298 (343)
T cd07851 297 AH 298 (343)
T ss_pred cC
Confidence 75
No 379
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=268.79 Aligned_cols=257 Identities=19% Similarity=0.280 Sum_probs=203.6
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEec-CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lV~e~ 444 (686)
.++-+|.||.||+|.+. +.+.|.||.++.. +.-....+..|.-.+..+.|||+..+.+++... +..+++|.+
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~ 369 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPA 369 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEec
Confidence 46789999999999554 4566788888654 334456789999999999999999999998765 567999999
Q ss_pred cCCCCHHHHhhcCCCc--cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 445 IPNGSLATAIHGKAGI--ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
+.-|+|..++...++. ...+.++-.+...++.|++.|++|||. ++|||.||.++|.+||+..++||+|=.+++.+
T Consensus 370 ~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDL 446 (563)
T KOG1024|consen 370 TGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQLQVKLTDSALSRDL 446 (563)
T ss_pred cCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhheeEEeccchhcccc
Confidence 9999999999833221 122567788889999999999999999 99999999999999999999999999999977
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCcc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSM 601 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~ 601 (686)
-+.+..- .|. .......||+||.+....|+.++|||||||+||||+| |+.||...++.
T Consensus 447 FP~DYhc--------LGD-------------nEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 447 FPGDYHC--------LGD-------------NENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred Ccccccc--------cCC-------------CCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 6544321 111 1122346999999999999999999999999999999 99999655443
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+ +...+.++..+.. +-.++.++..+|.-||+.+|++||+++|++.-|.+...
T Consensus 506 E------m~~ylkdGyRlaQ-----------P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 506 E------MEHYLKDGYRLAQ-----------PFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred H------HHHHHhccceecC-----------CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 3 2344444443322 12355678899999999999999999999999987653
No 380
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-33 Score=278.16 Aligned_cols=257 Identities=25% Similarity=0.342 Sum_probs=192.1
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCC-Ccc------chHHHHHHHHHHhccCCCCcceeeEEEEec-CceeEEEe
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG-GWQ------RFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-DEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lV~e 443 (686)
++||+|+|++|||+.. ...+-||||+-... ++. ..+...+|.+|-+.++||.||++|+||.-+ +..+-|+|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLE 548 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLE 548 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeee
Confidence 4799999999999974 45678899875321 221 134567899999999999999999999754 56789999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec---CCCCeEEeecCccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLAR 520 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~ 520 (686)
||+|-+|+-+|+.. +.+++.++..|+.||+.||.||.+.. .+|||-||||.|||+. ..|.+||.|||+++
T Consensus 549 YceGNDLDFYLKQh------klmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 549 YCEGNDLDFYLKQH------KLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred ecCCCchhHHHHhh------hhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 99999999999876 46899999999999999999999866 4899999999999995 45789999999999
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC----CCCCcchHHHHHHHHHHHHhCCCCcc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR----KPTQKWDIYSYGVILLEMISGKLPMI 596 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwSlGvvl~elltG~~P~~ 596 (686)
+++......... +..+....||++|.+||.+.-+ +.+.|+||||.|||+|..+.|+.||.
T Consensus 622 IMdddSy~~vdG----------------meLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFG 685 (775)
T KOG1151|consen 622 IMDDDSYNSVDG----------------MELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFG 685 (775)
T ss_pred hccCCccCcccc----------------eeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCC
Confidence 997654322111 1234456889999999987533 47889999999999999999999994
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... .++.+. ..++.. .++ .-+..+....+...++.+||++.-++|....++..+
T Consensus 686 hnqsQ-QdILqe-NTIlkA----tEV------qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 686 HNQSQ-QDILQE-NTILKA----TEV------QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred CchhH-HHHHhh-hchhcc----eec------cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 43221 111111 011111 010 000111223356688999999999999998887654
No 381
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-32 Score=293.39 Aligned_cols=246 Identities=23% Similarity=0.370 Sum_probs=198.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEe-----cCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWS-----VDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~-----~~~~~lV~e~~ 445 (686)
++||.|.+|.||+++.. +++.+|+|+....... .++.+.|.++++.. +|||++.++|+|.. ++..++|||||
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC 103 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFC 103 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeecc
Confidence 47999999999999854 5778888887654333 36788899999988 79999999999974 46789999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
.+||..|+++...+ ..+.|..+..|++.++.||.+||. +.++|||||=.|||++.++.+|+.|||++..++..
T Consensus 104 ~gGSVTDLVKn~~g----~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 104 GGGSVTDLVKNTKG----NRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST 176 (953)
T ss_pred CCccHHHHHhhhcc----cchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence 99999999987654 579999999999999999999999 89999999999999999999999999999876532
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-----CCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-----KPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
- ...+..+||++|||||++... .|+..+|+||+|++..||.-|.+|+.++.+
T Consensus 177 ~-----------------------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP 233 (953)
T KOG0587|consen 177 V-----------------------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP 233 (953)
T ss_pred c-----------------------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch
Confidence 2 223456788899999998643 367899999999999999999999966554
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
... .+ .++..-.|.+.. ++....++.+++..||.+|-++||++.+++++
T Consensus 234 mra--------LF----~IpRNPPPkLkr---p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 234 MRA--------LF----LIPRNPPPKLKR---PKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred hhh--------hc----cCCCCCCccccc---hhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 321 11 112222233322 23456678899999999999999999998876
No 382
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.4e-33 Score=272.95 Aligned_cols=235 Identities=22% Similarity=0.329 Sum_probs=187.8
Q ss_pred hcccCccCceEEEEEEeCC-CceEEEEEcCCCCc---cchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGW---QRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
-.+||+|+||.|..+..+. .+.+|||++++.-. .+.+--..|-++|+.- +-|.++.++.+|+..+..|+||||+.
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn 433 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN 433 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence 3579999999999998764 57899999977522 2233345677888776 57899999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
||+|...|+.-+ .+.++.+.-+|.+||-||-|||+ ++||.||||..||++|.+|++||+|||+++-.-...
T Consensus 434 GGDLMyhiQQ~G------kFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~ 504 (683)
T KOG0696|consen 434 GGDLMYHIQQVG------KFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG 504 (683)
T ss_pred CchhhhHHHHhc------ccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccccccCC
Confidence 999999998763 47788889999999999999999 999999999999999999999999999997322111
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
..+...+||+.|+|||.+..++|+..+|.|||||+||||+.|+.||.+.+.+
T Consensus 505 -----------------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~----- 556 (683)
T KOG0696|consen 505 -----------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED----- 556 (683)
T ss_pred -----------------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH-----
Confidence 1234568888999999999999999999999999999999999999654332
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP 656 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 656 (686)
+.++.+....-..+. ....+...+....+.+.|.+|-
T Consensus 557 elF~aI~ehnvsyPK-------------slSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 557 ELFQAIMEHNVSYPK-------------SLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred HHHHHHHHccCcCcc-------------cccHHHHHHHHHHhhcCCcccc
Confidence 234444443322222 1223556777788889999994
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.98 E-value=6.1e-33 Score=272.46 Aligned_cols=252 Identities=23% Similarity=0.311 Sum_probs=195.7
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC-C-C----CcceeeEEEEecCceeEEEeccC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-H-P----NIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~----nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
.+|+|.||.|-.+... .+..||||+++.... ..+...-|++++.++. + | -+|.+.++|.-.++.++|+|.+
T Consensus 96 ~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell- 173 (415)
T KOG0671|consen 96 LLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL- 173 (415)
T ss_pred hhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-
Confidence 5899999999998755 468899999976432 2356778999999993 2 2 3788889999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-------------------
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK------------------- 507 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~------------------- 507 (686)
|-|+.+++..+.- .+++...+..|+.|++++++|||+ .+++|-||||+|||+.+
T Consensus 174 G~S~~dFlk~N~y----~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 174 GLSTFDFLKENNY----IPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred ChhHHHHhccCCc----cccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 6699999987653 679999999999999999999999 89999999999999931
Q ss_pred -CCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHH
Q 042348 508 -NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586 (686)
Q Consensus 508 -~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ 586 (686)
+..+|++|||.|++.... .+..+.|..|+|||++.+-.++.++||||+||||.
T Consensus 247 ks~~I~vIDFGsAtf~~e~--------------------------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ 300 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHEH--------------------------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILV 300 (415)
T ss_pred CCcceEEEecCCcceeccC--------------------------cceeeeccccCCchheeccCcCCccCceeeeeEEE
Confidence 345899999999864422 23457788999999999999999999999999999
Q ss_pred HHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcc--------------------------------cccCCCcH
Q 042348 587 EMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPF--------------------------------LAHDLDKE 634 (686)
Q Consensus 587 elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--------------------------------l~~~~~~~ 634 (686)
|+.||..-|.... +.+....++.++.. .| ..++... -.......
T Consensus 301 ElytG~~LFqtHe--n~EHLaMMerIlGp-~P-~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d 376 (415)
T KOG0671|consen 301 ELYTGETLFQTHE--NLEHLAMMERILGP-IP-SRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDD 376 (415)
T ss_pred EeeccceecccCC--cHHHHHHHHHhhCC-Cc-HHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCc
Confidence 9999999996544 22333444444331 11 0000000 00011223
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 635 DEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 635 ~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+..++.+|+.+||..||.+|+|+.|++.+
T Consensus 377 ~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 377 LEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 566789999999999999999999999865
No 384
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=287.33 Aligned_cols=232 Identities=22% Similarity=0.295 Sum_probs=184.3
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
-+|.|+|+.|-++... +++..+||++.... .+-.+|+.++... +||||+++.+.+.+..+.++|||.+.+|-+.
T Consensus 329 ~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell 404 (612)
T KOG0603|consen 329 ELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELL 404 (612)
T ss_pred ccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHH
Confidence 4899999999998754 57789999997652 3346678777766 7999999999999999999999999999888
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee-cCCCCeEEeecCcccccccccCCcc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL-GKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl-~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
+.+.... ....++..|+.+|+.|+.|||+ +|+|||||||+|||+ ++.++++|+|||.++.....-
T Consensus 405 ~ri~~~~-------~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~---- 470 (612)
T KOG0603|consen 405 RRIRSKP-------EFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSC---- 470 (612)
T ss_pred HHHHhcc-------hhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchhh----
Confidence 8776542 2226778899999999999999 999999999999999 589999999999998654321
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
...+-|..|.|||+.....|++++|+||||++||+|++|+.||...... .+...
T Consensus 471 ----------------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~ 524 (612)
T KOG0603|consen 471 ----------------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHT 524 (612)
T ss_pred ----------------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHH
Confidence 1123366799999999999999999999999999999999999654433 11111
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+... +.. ........+|+..||+.||.+||+|.++..+
T Consensus 525 ~i~~~--~~s-------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 525 RIQMP--KFS-------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred hhcCC--ccc-------------cccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 11111 111 1223356789999999999999999999766
No 385
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-32 Score=244.41 Aligned_cols=201 Identities=21% Similarity=0.270 Sum_probs=162.9
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..-||+|++|.|-+-++. +|...|+|++... ..+..++..+|+.+..+. ..|.+|+++|.+......++.||.|+ -
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-t 129 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-T 129 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-h
Confidence 345999999999888754 6899999999764 445567788899886665 79999999999999999999999995 4
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
||+.+-.+--.. ...+++..+-+|+..+..||.|||+. ..+||||+||+|||++.+|++|+||||++-.+..+..
T Consensus 130 Sldkfy~~v~~~--g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA- 204 (282)
T KOG0984|consen 130 SLDKFYRKVLKK--GGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA- 204 (282)
T ss_pred hHHHHHHHHHhc--CCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhhH-
Confidence 887776542111 14688899999999999999999985 4699999999999999999999999999987653321
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC----CCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV----RKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
.+-..|...|||||.+.. ..|+-|+||||+|+++.||.+++.||......
T Consensus 205 -----------------------kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 205 -----------------------KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred -----------------------HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 111234456999998754 36899999999999999999999999765543
No 386
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=6.5e-33 Score=296.00 Aligned_cols=247 Identities=26% Similarity=0.370 Sum_probs=188.9
Q ss_pred hhcccCccCce-EEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 371 SAFLLGKSTIG-IVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 371 ~~~~iG~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..+++|.|+.| .||+|.+. ++.||||++-... ..-..+||..|+.- +|||||++++.-.+.+..||..|.|..
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~- 587 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC- 587 (903)
T ss_pred cHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-
Confidence 34578999887 57999987 6899999986532 24567999999988 699999999999999999999999955
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC---C--CCeEEeecCcccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK---N--MEPHISDFGLARLAD 523 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~---~--~~~kl~DfGla~~~~ 523 (686)
+|.+++....... ....-.....++.|++.||++||+ -+||||||||.||||+. + ..++|+|||+++.+.
T Consensus 588 sL~dlie~~~~d~--~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 588 SLQDLIESSGLDV--EMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hHHHHHhccccch--hhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 9999998751110 111113457789999999999999 78999999999999975 3 478999999999876
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhC-CCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG-KLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG-~~P~~~~~~~~ 602 (686)
.+.. .+.......||.+|+|||++....-+.++||||+|||+|+.++| ++||......+
T Consensus 663 ~~~s--------------------S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~ 722 (903)
T KOG1027|consen 663 GGKS--------------------SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ 722 (903)
T ss_pred CCcc--------------------hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh
Confidence 4432 12334566789999999999988888899999999999999995 99995433333
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+ ++.+...+..+ . ...++ +..+|+.+|+.++|..||++.+|+.|
T Consensus 723 ~N-------Il~~~~~L~~L-~-------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 723 AN-------ILTGNYTLVHL-E-------PLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred hh-------hhcCccceeee-c-------cCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 22 22222222111 0 11122 56799999999999999999999876
No 387
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=6.7e-31 Score=262.77 Aligned_cols=238 Identities=25% Similarity=0.383 Sum_probs=191.0
Q ss_pred CceEEEEEEeCC-CceEEEEEcCCCCccc-hHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHHHhhc
Q 042348 379 TIGIVYKVALNN-EEAVAVRRLGNGGWQR-FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHG 456 (686)
Q Consensus 379 ~~g~Vy~~~~~~-~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 456 (686)
+||.||+|...+ ++.+++|++....... .+.+.+|++.+++++|+||+++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999874 8899999997765444 67899999999999999999999999999999999999999999999876
Q ss_pred CCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccccccc
Q 042348 457 KAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQS 536 (686)
Q Consensus 457 ~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 536 (686)
.. .+++..+..++.+++.+++|||+ .+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~------~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---------- 141 (244)
T smart00220 81 RG------RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---------- 141 (244)
T ss_pred cc------CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc----------
Confidence 43 38899999999999999999999 899999999999999999999999999998654321
Q ss_pred ccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhc
Q 042348 537 TTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDR 616 (686)
Q Consensus 537 ~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 616 (686)
......++..|++||......++.++||||||+++|++++|..||...... ...........
T Consensus 142 --------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~----~~~~~~~~~~~ 203 (244)
T smart00220 142 --------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL----LELFKKIGKPK 203 (244)
T ss_pred --------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHhccC
Confidence 112234566799999998888899999999999999999999999542211 11222221111
Q ss_pred CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042348 617 KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663 (686)
Q Consensus 617 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 663 (686)
...... .......+.+++.+|+..+|++||++.++++
T Consensus 204 ~~~~~~----------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 204 PPFPPP----------EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CCCccc----------cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 111000 0002346888999999999999999999986
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=5.4e-31 Score=284.45 Aligned_cols=256 Identities=21% Similarity=0.293 Sum_probs=173.7
Q ss_pred hcccCccCceEEEEEEe-----------------CCCceEEEEEcCCCCccchHH--------------HHHHHHHHhcc
Q 042348 372 AFLLGKSTIGIVYKVAL-----------------NNEEAVAVRRLGNGGWQRFKE--------------FQTEAEAIGKI 420 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E~~~l~~l 420 (686)
.+.||+|+||.||+|.. ..++.||||++........++ +..|+.++.++
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l 229 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKI 229 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHh
Confidence 35799999999999964 235679999986543222223 34577777778
Q ss_pred CCCCc-----ceeeEEEEe--------cCceeEEEeccCCCCHHHHhhcCCCc------------------cccCCCCHH
Q 042348 421 RHPNI-----VSLRAYFWS--------VDEKLLIYDYIPNGSLATAIHGKAGI------------------ISYRPLSWS 469 (686)
Q Consensus 421 ~H~nI-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~~------------------~~~~~l~~~ 469 (686)
+|.++ ++++++|.. .+..++||||+++|+|.++++...+. .....++|.
T Consensus 230 ~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~ 309 (507)
T PLN03224 230 KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDIN 309 (507)
T ss_pred hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHH
Confidence 66654 677887753 35679999999999999999854211 011245788
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCcccc
Q 042348 470 DRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549 (686)
Q Consensus 470 ~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 549 (686)
.+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 310 ~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~--------------------- 365 (507)
T PLN03224 310 VIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF--------------------- 365 (507)
T ss_pred HHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc---------------------
Confidence 899999999999999999 89999999999999999999999999999754321100
Q ss_pred ccccCCCCCccccCcccccCCC--------------------C--CCcchHHHHHHHHHHHHhCCC-CccccCccchh--
Q 042348 550 TALNSTTSRSYYQAPEASKVRK--------------------P--TQKWDIYSYGVILLEMISGKL-PMIQIGSMELN-- 604 (686)
Q Consensus 550 ~~~~~~~gt~~y~aPE~~~~~~--------------------~--~~~sDVwSlGvvl~elltG~~-P~~~~~~~~~~-- 604 (686)
......+|+.|+|||.+.... + ..+.||||+||++|||++|.. ||........+
T Consensus 366 -~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~ 444 (507)
T PLN03224 366 -NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELR 444 (507)
T ss_pred -CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHh
Confidence 001123366799999875322 1 235799999999999999885 66432111111
Q ss_pred -----HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCC---CCCCCHHHHHHH
Q 042348 605 -----IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSP---DKRPSMRHVCDS 664 (686)
Q Consensus 605 -----~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPs~~ev~~~ 664 (686)
...|. ........+ ... ........+++.++|..+| .+|+|++|+++|
T Consensus 445 ~~~~~~~~~r-~~~~~~~~~-~~~----------d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 445 QYDNDLNRWR-MYKGQKYDF-SLL----------DRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred hccchHHHHH-hhcccCCCc-ccc----------cccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 11111 010010000 001 1122356788999998766 689999999876
No 389
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=4.2e-31 Score=292.96 Aligned_cols=257 Identities=19% Similarity=0.230 Sum_probs=161.2
Q ss_pred cccCccCceEEEEEEeCC-----CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEE------EEecCceeEE
Q 042348 373 FLLGKSTIGIVYKVALNN-----EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAY------FWSVDEKLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~------~~~~~~~~lV 441 (686)
+.||+|+||.||+|...+ +..||||++...... +.+..| .+....+.+++.++.. .......++|
T Consensus 138 ~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV 213 (566)
T PLN03225 138 KKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWLV 213 (566)
T ss_pred EEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceEEE
Confidence 479999999999998754 688999988653221 111111 1222223333332222 2345678999
Q ss_pred EeccCCCCHHHHhhcCCCcc--------------ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC
Q 042348 442 YDYIPNGSLATAIHGKAGII--------------SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK 507 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~--------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~ 507 (686)
|||+++++|.++++...... .........+..|+.|++.||+|||+ ++|+||||||+|||+++
T Consensus 214 ~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP~NILl~~ 290 (566)
T PLN03225 214 WRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKPQNIIFSE 290 (566)
T ss_pred EEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCHHHEEEeC
Confidence 99999999999997542100 00011234466899999999999999 89999999999999985
Q ss_pred -CCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC----------------
Q 042348 508 -NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR---------------- 570 (686)
Q Consensus 508 -~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---------------- 570 (686)
++.+||+|||+|+.+..... .......+++.|+|||.+...
T Consensus 291 ~~~~~KL~DFGlA~~l~~~~~----------------------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~s 348 (566)
T PLN03225 291 GSGSFKIIDLGAAADLRVGIN----------------------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALS 348 (566)
T ss_pred CCCcEEEEeCCCccccccccc----------------------cCCcccccCCCccChHHhhccCCCCCCcccccccccc
Confidence 57999999999985532211 011234567779999955321
Q ss_pred ------CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCc---ccccCcccccC----CCc-HHH
Q 042348 571 ------KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPM---TDILDPFLAHD----LDK-EDE 636 (686)
Q Consensus 571 ------~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~l~~~----~~~-~~~ 636 (686)
.++.++|||||||++|||+++..|+.. +...+...+....... .....+....+ +.. ...
T Consensus 349 p~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 422 (566)
T PLN03225 349 PVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS------NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLD 422 (566)
T ss_pred chhccccCCCCcccHHHHHHHHHHHhCcCCCch------HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhcccc
Confidence 234567999999999999998776521 1111111111111000 00011100000 000 001
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 637 IVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 637 ~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+++.+||+.||++|||++|+++|
T Consensus 423 ~~~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 423 GGAGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred chHHHHHHHHHccCCcccCCCHHHHhCC
Confidence 1234589999999999999999999987
No 390
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-32 Score=272.81 Aligned_cols=242 Identities=20% Similarity=0.299 Sum_probs=195.7
Q ss_pred ccCccCceEEEEEEeCCCc-eEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALNNEE-AVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~-~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||-|+||.|-.+..+... .+|+|.+++.. ....+....|-++|...+.|.||++|-.|.+.++.|+.||-|-||.
T Consensus 427 TLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGE 506 (732)
T KOG0614|consen 427 TLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGE 506 (732)
T ss_pred hcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCch
Confidence 4899999999999887544 37888876643 2334567789999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|...++.++ .++.....-++..+.+|++|||+ ++||.|||||+|.++|.+|.+||.|||+|+.+..+..+
T Consensus 507 lWTiLrdRg------~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT- 576 (732)
T KOG0614|consen 507 LWTILRDRG------SFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT- 576 (732)
T ss_pred hhhhhhhcC------CcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccCCce-
Confidence 999999874 57778888899999999999999 99999999999999999999999999999988755432
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
-..+||+.|.|||.+.....+.++|.||+|+++|||++|.+||...+++. ..
T Consensus 577 -----------------------wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk-----tY 628 (732)
T KOG0614|consen 577 -----------------------WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK-----TY 628 (732)
T ss_pred -----------------------eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-----HH
Confidence 24678888999999998888999999999999999999999997655433 23
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~ 664 (686)
..++.+-..+ ++ | ........+++.+....+|.+|-. +.+|-+|
T Consensus 629 n~ILkGid~i-~~--P--------r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 629 NLILKGIDKI-EF--P--------RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred HHHHhhhhhh-hc--c--------cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 4444432111 10 0 011224557788888899999965 6666665
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.5e-31 Score=252.00 Aligned_cols=267 Identities=20% Similarity=0.318 Sum_probs=201.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
.+||+|+|..|..+++. +.+.+|+|++++. ...+.+-.+.|-.+..+. +||.+|-++.+|......++|.||++|
T Consensus 256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~g 335 (593)
T KOG0695|consen 256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNG 335 (593)
T ss_pred eeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecC
Confidence 47999999999999876 4678999998763 333445567788888777 799999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.-+++.. +.|+++.+.-+..+|+.||.|||+ +|||.||||..|+|+|..|++||.|||+++---...
T Consensus 336 gdlmfhmqrq------rklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~~g- 405 (593)
T KOG0695|consen 336 GDLMFHMQRQ------RKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG- 405 (593)
T ss_pred cceeeehhhh------hcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCCCC-
Confidence 9998888765 469999999999999999999999 999999999999999999999999999997321111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccC--ccchhH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIG--SMELNI 605 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~--~~~~~~ 605 (686)
..++..+||+.|+|||.+.+..|...+|.|++||+|+||+.|+.||+-.+ +.+.+-
T Consensus 406 ----------------------d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nt 463 (593)
T KOG0695|consen 406 ----------------------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNT 463 (593)
T ss_pred ----------------------cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccch
Confidence 12345788889999999999999999999999999999999999995432 233333
Q ss_pred HHHH-HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC------HHHHHHHHhcccccchhhhhc
Q 042348 606 VQWI-QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS------MRHVCDSLDRVNISTEQQFMK 678 (686)
Q Consensus 606 ~~~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~ev~~~L~~i~~~~~~~~~~ 678 (686)
.++. +.++...-.++..+ ..+...++...|.+||.+|-. ++++..+----...++.--++
T Consensus 464 edylfqvilekqiriprsl-------------svkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk 530 (593)
T KOG0695|consen 464 EDYLFQVILEKQIRIPRSL-------------SVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQK 530 (593)
T ss_pred hHHHHHHHhhhccccccee-------------ehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhc
Confidence 3333 33333332222211 123446777889999999843 334433311112344444456
Q ss_pred cCCCCC
Q 042348 679 GEEPKF 684 (686)
Q Consensus 679 ~~~~~~ 684 (686)
+..|+|
T Consensus 531 ~v~ppf 536 (593)
T KOG0695|consen 531 QVLPPF 536 (593)
T ss_pred ccCCCC
Confidence 666766
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=2.7e-30 Score=236.17 Aligned_cols=252 Identities=19% Similarity=0.289 Sum_probs=191.5
Q ss_pred ccCccCceEEEEEE-eCCCceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEEEecC--ceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVD--EKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~~~lV~e~~~~gs 449 (686)
.+|+|.+++||.|. ..+.+.++||.++.. ..+.+.+|+.+|..++ ||||+++++...+.. ...+|+||+.+.+
T Consensus 45 k~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~D 121 (338)
T KOG0668|consen 45 KVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTD 121 (338)
T ss_pred HHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcccc
Confidence 48999999999997 456788999999763 3467889999999997 999999999998764 4589999999988
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-CCCeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~~~~ 528 (686)
...+. ..|+-.++..++.+++.||.|+|+ .||+|||+||.|++||. .-.++|+|+|+|.++.++..
T Consensus 122 fk~ly---------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e- 188 (338)
T KOG0668|consen 122 FKQLY---------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE- 188 (338)
T ss_pred HHHHh---------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCCCce-
Confidence 87765 457788899999999999999999 99999999999999995 45799999999998765432
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
-+..+.+.+|.-||.+.. +.|+..-|+|||||++..|+..+.||....+....++.
T Consensus 189 -----------------------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVk 245 (338)
T KOG0668|consen 189 -----------------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVK 245 (338)
T ss_pred -----------------------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHH
Confidence 123455667999998865 56889999999999999999999999655544444444
Q ss_pred HHHHHHhhc-----CCcccccCccccc---CC------------CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDR-----KPMTDILDPFLAH---DL------------DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~-----~~~~~~~d~~l~~---~~------------~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+...-.+. ....-.+||.... .. ...-...+.++++.+.|.+|-.+|+|++|...+
T Consensus 246 IakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 246 IAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 332211100 0000112222211 00 000122467899999999999999999998876
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.4e-32 Score=252.28 Aligned_cols=259 Identities=24% Similarity=0.372 Sum_probs=190.8
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec-----CceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-----DEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lV~e~~ 445 (686)
-||-|+||.||.+... +|+.||.|++... +....+++.+|+++|..++|.|++..++...-. ++.|+++|.|
T Consensus 60 PIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELm 139 (449)
T KOG0664|consen 60 PIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELM 139 (449)
T ss_pred cccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHH
Confidence 5899999999999865 6899999998653 334457889999999999999999999887643 3568899999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
. .+|..+|-.. +.++...++-++.||++||.|||+ .+|.||||||.|.|++++-..||+|||+|+..+..
T Consensus 140 Q-SDLHKIIVSP------Q~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 140 Q-SDLHKIIVSP------QALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred H-hhhhheeccC------CCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccchh
Confidence 4 5898888765 568889999999999999999999 89999999999999999999999999999976544
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
+. ...+..+-|.+|+|||.+.+ ..|+.+.||||.||++.||+-++.-|...+.-+
T Consensus 210 ~~----------------------~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Piq-- 265 (449)
T KOG0664|consen 210 DR----------------------LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIE-- 265 (449)
T ss_pred hh----------------------hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHH--
Confidence 32 12223345778999999987 569999999999999999999888885443321
Q ss_pred HHHHHHHHHhhc----------CCccccc-----Ccccc---cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 605 IVQWIQLILEDR----------KPMTDIL-----DPFLA---HDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 605 ~~~~~~~~~~~~----------~~~~~~~-----d~~l~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
..+.+-..+... .....++ .|.+. ........-.+...+.+.++..||++|.+..+.+.++.
T Consensus 266 QL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 266 QLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 111111111100 0000000 01110 00011112234557778899999999999999988764
No 394
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.5e-30 Score=265.74 Aligned_cols=219 Identities=22% Similarity=0.310 Sum_probs=170.1
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCcc---chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ---RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
-||-|+||+|.+++.. +...+|+|.+++.+.- .......|-.||...+.+.||+||-.|.+++..|+||||++|||
T Consensus 636 ~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGD 715 (1034)
T KOG0608|consen 636 TIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGD 715 (1034)
T ss_pred eecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCcc
Confidence 4999999999998754 4567899998775432 23456789999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
+..+|-..+ .+.+..+.-++.++..|+++.|. .|+|||||||+|||||.||++||.|||++.-+.......
T Consensus 716 mMSLLIrmg------IFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 716 MMSLLIRMG------IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred HHHHHHHhc------cCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceeccccc
Confidence 999987653 47788888889999999999999 899999999999999999999999999987443221110
Q ss_pred ----cccccccccCCC------------CC-C--CccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh
Q 042348 530 ----EVHWEQSTTGTP------------LQ-S--SPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS 590 (686)
Q Consensus 530 ----~~~~~~~~~g~~------------~~-~--~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt 590 (686)
..+.+...+.-+ .. . ...........+||..|+|||++....|+..+|.||.|||||||+.
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhh
Confidence 000000000000 00 0 0000111234689999999999999999999999999999999999
Q ss_pred CCCCccccCcc
Q 042348 591 GKLPMIQIGSM 601 (686)
Q Consensus 591 G~~P~~~~~~~ 601 (686)
|+.||......
T Consensus 867 g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 867 GQPPFLADTPG 877 (1034)
T ss_pred CCCCccCCCCC
Confidence 99999655443
No 395
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=2e-29 Score=242.09 Aligned_cols=251 Identities=25% Similarity=0.330 Sum_probs=185.1
Q ss_pred ccCccCceEEEEEEe-CCCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec------CceeEEEec
Q 042348 374 LLGKSTIGIVYKVAL-NNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV------DEKLLIYDY 444 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lV~e~ 444 (686)
.+|.|.- .|-.+.. -.+++||+|++... .....++..+|...+..+.|+||++++.+|.-. .+.|+||||
T Consensus 24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~ 102 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMEL 102 (369)
T ss_pred ccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHh
Confidence 3677776 4444432 24788999987543 344557788999999999999999999998643 356999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
| .++|...++. .++-.++..|+.|++.|++|||+ .+|+||||||+||++..+..+||.|||+|+....
T Consensus 103 m-~~nl~~vi~~--------elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 103 M-DANLCQVILM--------ELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred h-hhHHHHHHHH--------hcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhcccCc
Confidence 9 4699998873 36778889999999999999999 9999999999999999999999999999974331
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
. ...+..+.|.+|.|||++.+..|.+.+||||.||++.||++|+.-|.+ ...
T Consensus 171 ~------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g----~d~ 222 (369)
T KOG0665|consen 171 D------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG----KDH 222 (369)
T ss_pred c------------------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC----chH
Confidence 1 123456778899999999998899999999999999999999998842 223
Q ss_pred HHHHHHHHHhhcCCcc--------------------------ccc-CcccccCCCc-HHHHHHHHHHHHhccccCCCCCC
Q 042348 605 IVQWIQLILEDRKPMT--------------------------DIL-DPFLAHDLDK-EDEIVSVLKIALDCVHKSPDKRP 656 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~--------------------------~~~-d~~l~~~~~~-~~~~~~l~~l~~~cl~~dP~~RP 656 (686)
+.+|.+.+..-+.+-. +.+ |..+...... ........+++.+||..||++|.
T Consensus 223 idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Ri 302 (369)
T KOG0665|consen 223 IDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRI 302 (369)
T ss_pred HHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcc
Confidence 3333332222111100 000 0000000000 11223466889999999999999
Q ss_pred CHHHHHHHH
Q 042348 657 SMRHVCDSL 665 (686)
Q Consensus 657 s~~ev~~~L 665 (686)
+++++++|=
T Consensus 303 sv~daL~HP 311 (369)
T KOG0665|consen 303 SVDDALRHP 311 (369)
T ss_pred cHHHHhcCC
Confidence 999999873
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=5.8e-28 Score=235.64 Aligned_cols=211 Identities=31% Similarity=0.514 Sum_probs=180.6
Q ss_pred cCccCceEEEEEEeCC-CceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 375 LGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
||+|.+|.||++...+ ++.+++|.+...... ..+.+.+|++.++.++|++|+++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999865 889999999765432 34679999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-CCCeEEeecCcccccccccCCccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
++.... ..+++..+..++.+++++++|||+ .+++|+||+|.||+++. ++.++|+|||.+........
T Consensus 81 ~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---- 148 (215)
T cd00180 81 LLKENE-----GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---- 148 (215)
T ss_pred HHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----
Confidence 997642 258899999999999999999999 89999999999999999 89999999999875542210
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......+...|++||..... .++.++|+|++|++++++
T Consensus 149 -------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------- 187 (215)
T cd00180 149 -------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------- 187 (215)
T ss_pred -------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------
Confidence 01122345569999998776 788999999999999999
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
..+.+++.+|++.+|++||++.++++++
T Consensus 188 ---------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2466889999999999999999998753
No 397
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-28 Score=229.67 Aligned_cols=247 Identities=18% Similarity=0.320 Sum_probs=187.6
Q ss_pred hcccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEE-EEecCceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAY-FWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~-~~~~~~~~lV~e~~~~g 448 (686)
...+|+|.||.+-.++++. .+.+++|.+.... ...++|.+|...--.| .|.||+.-|+. |+..+.+++++||++.|
T Consensus 29 ~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~g 107 (378)
T KOG1345|consen 29 NKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRG 107 (378)
T ss_pred HHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccc
Confidence 3469999999999999874 6788999887643 3457899998876666 59999987765 66778889999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee-c-CCCCeEEeecCccccccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL-G-KNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl-~-~~~~~kl~DfGla~~~~~~~ 526 (686)
||..-+... .+-+....+++.|++.|+.|||+ +++||||||.+|||| + +..++||+|||+.+..+...
T Consensus 108 dL~snv~~~-------GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 108 DLRSNVEAA-------GIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred hhhhhcCcc-------cccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 999988653 36778889999999999999999 999999999999999 3 34589999999987432111
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-----CCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-----KPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
....-+..|.+||..... ...+.+|||.||+++|.++||+.||.....+
T Consensus 178 --------------------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~ 231 (378)
T KOG1345|consen 178 --------------------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM 231 (378)
T ss_pred --------------------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc
Confidence 011123348999976432 3578899999999999999999999876667
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
+....+|.+-.-+.....++.+.+ ......++..+-+..+|++|--..++.+..
T Consensus 232 d~~Y~~~~~w~~rk~~~~P~~F~~----------fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 232 DKPYWEWEQWLKRKNPALPKKFNP----------FSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred CchHHHHHHHhcccCccCchhhcc----------cCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 777777766554443344444433 223567788888999999995555554443
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.9e-28 Score=243.07 Aligned_cols=126 Identities=22% Similarity=0.291 Sum_probs=106.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC-----C---CCcceeeEEEEe----cCcee
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-----H---PNIVSLRAYFWS----VDEKL 439 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~nIv~l~~~~~~----~~~~~ 439 (686)
..||.|.|++||++... ..+.||+|+.+... ...+....||++|++++ | .+||++++.|.. +.+.+
T Consensus 84 rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVC 162 (590)
T KOG1290|consen 84 RKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVC 162 (590)
T ss_pred EeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEE
Confidence 35999999999999754 56789999987643 23466789999999983 3 479999999985 45789
Q ss_pred EEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec
Q 042348 440 LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG 506 (686)
Q Consensus 440 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~ 506 (686)
+|+|++ |.+|..+|....- +.++...+++|++||+.||.|||..+ +|||-||||+|||+.
T Consensus 163 MVfEvL-GdnLLklI~~s~Y----rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 163 MVFEVL-GDNLLKLIKYSNY----RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred EEehhh-hhHHHHHHHHhCC----CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 999999 6689999986643 67999999999999999999999864 799999999999993
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=5.1e-29 Score=255.45 Aligned_cols=190 Identities=23% Similarity=0.316 Sum_probs=163.1
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCC-----cc---chHHHHHHHHHHhccC---CCCcceeeEEEEecCceeE
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGG-----WQ---RFKEFQTEAEAIGKIR---HPNIVSLRAYFWSVDEKLL 440 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-----~~---~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~l 440 (686)
..+|+|+||.|+.+.++. ...|+||.+.+.. +. ..-..-.||.||..++ |+||++++++|++++.+|+
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl 646 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYL 646 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEE
Confidence 359999999999998874 5678999886531 11 1123567999999997 9999999999999999999
Q ss_pred EEecc-CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcc
Q 042348 441 IYDYI-PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA 519 (686)
Q Consensus 441 V~e~~-~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 519 (686)
+||-- ++-+|+++|..+ ..+++.++..|++||+.|+++||+ .+|||||||-+|+.++.+|-+||+|||.|
T Consensus 647 ~te~hg~gIDLFd~IE~k------p~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 647 ETEVHGEGIDLFDFIEFK------PRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred EecCCCCCcchhhhhhcc------CccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeeccch
Confidence 99986 567999999876 468999999999999999999999 89999999999999999999999999998
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCcc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMI 596 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~ 596 (686)
.+...+ .....+||.+|.|||++.+.+| +..-|||++|++||.++....||.
T Consensus 718 a~~ksg-------------------------pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 718 AYTKSG-------------------------PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhcCC-------------------------CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 755422 2345789999999999999887 667899999999999999999984
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-29 Score=261.63 Aligned_cols=245 Identities=24% Similarity=0.353 Sum_probs=194.3
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
.+|.|.||.|||++.. .++..|||.++-....+..-.++|+-+++..+|||||.++|.|...+..++.||||.+|+|++
T Consensus 22 rvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQd 101 (829)
T KOG0576|consen 22 RVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQD 101 (829)
T ss_pred eecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccc
Confidence 5999999999999864 688999999987766667778899999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
+-+.. .++++.++....+...+||+|||+ .+=+|||||=.||++++.|.+|++|||.+..+....
T Consensus 102 iy~~T------gplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitati------ 166 (829)
T KOG0576|consen 102 IYHVT------GPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI------ 166 (829)
T ss_pred eeeec------ccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhhh------
Confidence 88765 479999999999999999999999 888999999999999999999999999886543211
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccc---cCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS---KVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
....+..||++|||||+. ..+.|..++|||+.|++..|+---+.|........ ..
T Consensus 167 -----------------~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-----~l 224 (829)
T KOG0576|consen 167 -----------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-----AL 224 (829)
T ss_pred -----------------hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-----HH
Confidence 122356778889999986 34679999999999999999988887753322211 11
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 663 (686)
...-..... .|.+..... ....+.++++.|+-++|.+||+++.++.
T Consensus 225 ~LmTkS~~q-----pp~lkDk~k---ws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 225 FLMTKSGFQ-----PPTLKDKTK---WSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHhhccCCC-----CCcccCCcc---chHHHHHHHHHHhcCCCccCCChhhhee
Confidence 111111111 112221112 2345678888999999999999988765
No 401
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=4.3e-28 Score=241.85 Aligned_cols=279 Identities=20% Similarity=0.303 Sum_probs=195.2
Q ss_pred hcccCccCceEEEEEEeC----CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALN----NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
.+.||+|.|++||++... ..+.||+|.+...+. ..+...|++.|..+ -+.||+++.+++..++...+|+||++
T Consensus 41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~ 118 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFE 118 (418)
T ss_pred hccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccC
Confidence 356999999999999754 357899999876533 35789999999999 59999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-CCCeEEeecCcccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLADIA 525 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~ 525 (686)
.....++.. .++..++..+++.+..||+++|. +|||||||||+|+|.+. .+.-.|.|||+|...+..
T Consensus 119 H~~f~~l~~---------~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~ 186 (418)
T KOG1167|consen 119 HDRFRDLYR---------SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY 186 (418)
T ss_pred ccCHHHHHh---------cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence 999988874 47788999999999999999999 99999999999999984 456789999999843211
Q ss_pred cCCccccc----cccc-cCC----------CCCCC------ccccccccCCCCCccccCcccccC-CCCCCcchHHHHHH
Q 042348 526 EETPEVHW----EQST-TGT----------PLQSS------PYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGV 583 (686)
Q Consensus 526 ~~~~~~~~----~~~~-~g~----------~~~~~------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGv 583 (686)
........ .... .|. ..+.. ...........||++|+|||++.. ...++++||||.||
T Consensus 187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GV 266 (418)
T KOG1167|consen 187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGV 266 (418)
T ss_pred hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccc
Confidence 10000000 0000 000 00000 000112345789999999999865 45689999999999
Q ss_pred HHHHHHhCCCCccccCccchhHHHHHHHH--------H--hhc------CC---cccc------cC-ccccc-C------
Q 042348 584 ILLEMISGKLPMIQIGSMELNIVQWIQLI--------L--EDR------KP---MTDI------LD-PFLAH-D------ 630 (686)
Q Consensus 584 vl~elltG~~P~~~~~~~~~~~~~~~~~~--------~--~~~------~~---~~~~------~d-~~l~~-~------ 630 (686)
|++-+++++.||.....+-..+.+.+... . .+. .. ..+. ++ ..+.. +
T Consensus 267 I~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~ 346 (418)
T KOG1167|consen 267 ILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTER 346 (418)
T ss_pred eeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceee
Confidence 99999999999966554433333222110 0 011 00 0000 00 00000 0
Q ss_pred -CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 631 -LDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 631 -~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.....+++++.+|++.||.+|.|+++.+++
T Consensus 347 ~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 347 EIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0001122368899999999999999999999887
No 402
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=4.1e-28 Score=245.73 Aligned_cols=256 Identities=18% Similarity=0.223 Sum_probs=193.3
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC------CCCcceeeEEEEecCceeEEEeccC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR------HPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..|+|-|++|.+|... .|..||||++...... .+.=+.|+++|++|. --|+++++-.|...++.+||+|-+
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~L- 516 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPL- 516 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhh-
Confidence 4799999999999865 4779999999775322 244578999999994 358999999999999999999988
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-CCeEEeecCcccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-MEPHISDFGLARLADIA 525 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~~~~~ 525 (686)
.-+|.++|...+.. ..|....+..++.|+.-||..|-. -+|+|.||||.|||+++. ..+||||||.|......
T Consensus 517 slNLRevLKKyG~n---vGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en 590 (752)
T KOG0670|consen 517 SLNLREVLKKYGRN---VGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILKLCDFGSASFASEN 590 (752)
T ss_pred hchHHHHHHHhCcc---cceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceeeeccCccccccccc
Confidence 45999999876533 458889999999999999999999 789999999999999865 56899999999877655
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
+.++ +.-+.+|.|||.+.+-.|+...|+||.||+||||.||+.-|.+..+.. +
T Consensus 591 eitP-------------------------YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~--M 643 (752)
T KOG0670|consen 591 EITP-------------------------YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ--M 643 (752)
T ss_pred cccH-------------------------HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHH--H
Confidence 4332 223457999999999999999999999999999999999996544322 2
Q ss_pred HHHHHHHH--------hhcCCccc--------------------------ccCc------ccccC--C--CcHHHHHHHH
Q 042348 606 VQWIQLIL--------EDRKPMTD--------------------------ILDP------FLAHD--L--DKEDEIVSVL 641 (686)
Q Consensus 606 ~~~~~~~~--------~~~~~~~~--------------------------~~d~------~l~~~--~--~~~~~~~~l~ 641 (686)
..++..+- ....-... .+.| .+... . .......++.
T Consensus 644 Lrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~r 723 (752)
T KOG0670|consen 644 LRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLR 723 (752)
T ss_pred HHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHH
Confidence 22221110 00000000 0111 00000 0 1123456788
Q ss_pred HHHHhccccCCCCCCCHHHHHHH
Q 042348 642 KIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 642 ~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+|+..|+..||++|.|..|.+.|
T Consensus 724 dLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 724 DLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHHHHHhccChhhcCCHHHHhcC
Confidence 99999999999999999998865
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.2e-26 Score=229.32 Aligned_cols=195 Identities=32% Similarity=0.474 Sum_probs=167.2
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||.|++|.||++...+ ++.+++|.+...... ..+.+.+|++.+++++|+|++++++++...+..++++||+++++|
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 84 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDL 84 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCH
Confidence 468999999999999875 789999999876544 567899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++..... .+++..+..++.+++.++.|||+ .+++|+||+|+||+++.++.++|+|||.+........
T Consensus 85 ~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--- 153 (225)
T smart00221 85 FDYLRKKGG-----KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA--- 153 (225)
T ss_pred HHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc---
Confidence 999986531 27899999999999999999999 8999999999999999999999999999886543210
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccc-cCCCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
.......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 154 -------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 -------------------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred -------------------ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 001123445679999998 667788899999999999999999999944
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=4.9e-27 Score=273.95 Aligned_cols=213 Identities=16% Similarity=0.190 Sum_probs=143.2
Q ss_pred hccCC-CCcceeeEEEE-------ecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC
Q 042348 418 GKIRH-PNIVSLRAYFW-------SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS 489 (686)
Q Consensus 418 ~~l~H-~nIv~l~~~~~-------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~ 489 (686)
+.++| +||++++++|. ..+..+.+|||+ +++|.++|.... ..+++.+++.|+.||++||+|||+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~-- 98 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHS-- 98 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHh--
Confidence 34556 68888888872 334567788987 669999997543 468999999999999999999999
Q ss_pred CCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc----ccccc--------------ccccCCCCCCCcccccc
Q 042348 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP----EVHWE--------------QSTTGTPLQSSPYEFTA 551 (686)
Q Consensus 490 ~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~----~~~~~--------------~~~~g~~~~~~~~~~~~ 551 (686)
++|+||||||+|||++..+.+|++|||++.......... +.... ....+++. ...
T Consensus 99 -~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~------~~~ 171 (793)
T PLN00181 99 -QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPF------PMK 171 (793)
T ss_pred -CCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCC------ccc
Confidence 899999999999999776666666666554322111000 00000 00001110 001
Q ss_pred ccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCC
Q 042348 552 LNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDL 631 (686)
Q Consensus 552 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 631 (686)
.....||..|||||++.+..++.++|||||||+||||++|..|+.... ..+....... ..+..
T Consensus 172 ~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-------~~~~~~~~~~------~~~~~---- 234 (793)
T PLN00181 172 QILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-------RTMSSLRHRV------LPPQI---- 234 (793)
T ss_pred ccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-------HHHHHHHHhh------cChhh----
Confidence 122467899999999999999999999999999999999988873211 1111111110 11110
Q ss_pred CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 632 DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 632 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.........++.+||+++|.+||+|.|++++
T Consensus 235 --~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 235 --LLNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred --hhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 0112235577889999999999999999875
No 405
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=4.1e-26 Score=273.72 Aligned_cols=226 Identities=37% Similarity=0.606 Sum_probs=162.9
Q ss_pred hcCCChhHHHHHHHHHHhccCCCCC--CCCCCCCCCCcceeeeEec-CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEc
Q 042348 12 LMGSANDEGLALLSFKQAIRNFPEG--NNWNNSNEDPCSWNGITCR-EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNL 88 (686)
Q Consensus 12 ~~~~~~~~~~~l~~~k~~~~~~~~~--~~w~~~~~~~c~w~gv~c~-~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L 88 (686)
.+.+..+|..||+.||+++. +|.. .+|+. +.++|.|.||+|+ .++|+.|+|++|+++|.+|..|..+++|+.|+|
T Consensus 23 ~~~~~~~~~~~l~~~~~~~~-~~~~~~~~w~~-~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~L 100 (968)
T PLN00113 23 FSMLHAEELELLLSFKSSIN-DPLKYLSNWNS-SADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINL 100 (968)
T ss_pred ccCCCHHHHHHHHHHHHhCC-CCcccCCCCCC-CCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEEC
Confidence 44456689999999999994 4543 67864 4689999999997 478999999999999999999999999999999
Q ss_pred cCCCCcccCCcccc-CCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCC
Q 042348 89 RNNNFSGSLPVELF-NASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG 167 (686)
Q Consensus 89 ~~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 167 (686)
++|+++|.+|..+. ++++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..++.+++|++|+|++|.+++
T Consensus 101 s~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 178 (968)
T PLN00113 101 SNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG 178 (968)
T ss_pred CCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccc
Confidence 99999999998766 888888888888888776664 446667777777777766666666666677777777766666
Q ss_pred CCchhhhhcCcccceecccccccCCCCchhhhcccccccc------------------cccccccccCCCCCCCcccccc
Q 042348 168 PLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL------------------AQRVYVDLTYNNLSGLIPQNAA 229 (686)
Q Consensus 168 ~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l------------------~~~~~l~l~~N~l~~~~p~~~~ 229 (686)
.+|..+. ++++|++|+|++|++++.+|..++++++|+.| .++..|++++|++++.+|..+.
T Consensus 179 ~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 257 (968)
T PLN00113 179 KIPNSLT-NLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG 257 (968)
T ss_pred cCChhhh-hCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHh
Confidence 6666553 56666666666666666666666666655443 1122346666666665554432
Q ss_pred -cccCCcccccCCC
Q 042348 230 -LLSLGPTAFIGNP 242 (686)
Q Consensus 230 -~~~~~~~~~~~n~ 242 (686)
+.++..+.+.+|.
T Consensus 258 ~l~~L~~L~L~~n~ 271 (968)
T PLN00113 258 NLKNLQYLFLYQNK 271 (968)
T ss_pred CCCCCCEEECcCCe
Confidence 3334444444443
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=5.8e-26 Score=215.72 Aligned_cols=168 Identities=21% Similarity=0.275 Sum_probs=126.4
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.++++.+. ..+++.++..|+.|++.||+|||+ ++ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~-- 62 (176)
T smart00750 1 VSLADILEVRG-----RPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPE-- 62 (176)
T ss_pred CcHHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccc--
Confidence 78999998643 469999999999999999999999 55 999999999999999 9998754321
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
...||..|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 63 --------------------------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~--- 113 (176)
T smart00750 63 --------------------------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAI--- 113 (176)
T ss_pred --------------------------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHH---
Confidence 113567899999999999999999999999999999999999543322222
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHH--HHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEI--VSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~--~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
............. .+. ....... .++.+++.+||+.+|++||++.|+++++..+.
T Consensus 114 -~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 114 -LEILLNGMPADDP-RDR-----SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred -HHHHHHHhccCCc-ccc-----ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 2222221111100 000 0011111 25889999999999999999999999997764
No 407
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3.6e-25 Score=207.53 Aligned_cols=256 Identities=21% Similarity=0.358 Sum_probs=189.9
Q ss_pred cccCHHHHHHHhhcccCccCceEEEEEEeCCCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCc
Q 042348 360 VDFDLEQLLKASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE 437 (686)
Q Consensus 360 ~~~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 437 (686)
..++..++..-+ .|.+...|+.|+|+++. ..+++|++..... .-.++|..|.-.|+-+.||||..++|.|.....
T Consensus 185 ~gid~~~lnl~t--kl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppn 261 (448)
T KOG0195|consen 185 TGIDVSSLNLIT--KLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPN 261 (448)
T ss_pred cCcchhhhhhhh--hhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCC
Confidence 344555544333 37888899999999984 4466677654322 223679999999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEe--e
Q 042348 438 KLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHIS--D 515 (686)
Q Consensus 438 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~--D 515 (686)
..++..||+.|||+..+|+..+ -..+-.++.+++.++|+|++|||+..+ -|.---|.+..+++|++.+++|+ |
T Consensus 262 lv~isq~mp~gslynvlhe~t~----vvvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmidedltarismad 336 (448)
T KOG0195|consen 262 LVIISQYMPFGSLYNVLHEQTS----VVVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDEDLTARISMAD 336 (448)
T ss_pred ceEeeeeccchHHHHHHhcCcc----EEEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecchhhhheeccc
Confidence 9999999999999999998765 357778999999999999999999753 24444688999999999988875 3
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC---CCcchHHHHHHHHHHHHhCC
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP---TQKWDIYSYGVILLEMISGK 592 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDVwSlGvvl~elltG~ 592 (686)
--++... ....-.+.||+||.++..+- -.++|+|||.+++|||.|..
T Consensus 337 ~kfsfqe------------------------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~tre 386 (448)
T KOG0195|consen 337 TKFSFQE------------------------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTRE 386 (448)
T ss_pred ceeeeec------------------------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccc
Confidence 2222100 01122456999999876543 35799999999999999999
Q ss_pred CCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 593 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
.||....+.+.... ..++ -+.+.+... ....+.+++.-|+..||.+||.+..|+-.|+++.
T Consensus 387 vpfadlspmecgmk----iale-------glrv~ippg-----is~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 387 VPFADLSPMECGMK----IALE-------GLRVHIPPG-----ISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cccccCCchhhhhh----hhhc-------cccccCCCC-----ccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99977666543211 1111 111212111 2235678888999999999999999999999874
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=6e-23 Score=212.87 Aligned_cols=163 Identities=21% Similarity=0.211 Sum_probs=121.9
Q ss_pred cccCccCceEEEEEEeC--CCceEEEEEcCCC-----CccchHHHHHHHHHHhccCCCCcce-eeEEEEecCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN--NEEAVAVRRLGNG-----GWQRFKEFQTEAEAIGKIRHPNIVS-LRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~-l~~~~~~~~~~~lV~e~ 444 (686)
..||+|+||+||+|... +++.||||++... .....+.|.+|+++|++++|+||++ +++ .+..++||||
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~~~~LVmE~ 99 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TGKDGLVRGW 99 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cCCcEEEEEc
Confidence 46999999999999865 4677899986532 1123456899999999999999985 443 2567999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCC-CCCCeeecCCCCeEEeecCcccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL-RPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDl-kp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
+++++|... .. .. ...++.++++||+|||+ ++|+|||| ||+|||++.++.+||+|||+|+.+.
T Consensus 100 ~~G~~L~~~-~~---------~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 100 TEGVPLHLA-RP---------HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred cCCCCHHHh-Cc---------cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 999999732 11 01 14678999999999999 89999999 9999999999999999999998764
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR 570 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 570 (686)
...... +. ..........++..|+|||++...
T Consensus 164 ~~~~~~-----------~~----~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 164 RRGALY-----------RI----AAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cCcchh-----------hh----hhhhhhhhhhccCccCCcccCChh
Confidence 321100 00 001122356677889999987643
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2.1e-21 Score=202.38 Aligned_cols=263 Identities=18% Similarity=0.175 Sum_probs=188.2
Q ss_pred cccCccCceEEEEEEeCCC--ceEEEEEcCCCCccchHHHHHHHHHHhccCC----CCcceeeEEE-EecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALNNE--EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRH----PNIVSLRAYF-WSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~-~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|..... ..+|+|............+..|+.++..+.. +++..+++.. ......++||+.+
T Consensus 24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~ 103 (322)
T KOG1164|consen 24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL 103 (322)
T ss_pred eeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc
Confidence 4699999999999987653 4788887765433322367889999998863 6999999999 4777889999998
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-----CCeEEeecCccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-----MEPHISDFGLAR 520 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-----~~~kl~DfGla~ 520 (686)
|.+|.++...... +.++..++.+|+.|++.+|++||+ .|++||||||+|+++... ..+.|.|||+|+
T Consensus 104 -G~sL~dl~~~~~~----~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 104 -GPSLEDLRKRNPP----GRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred -CccHHHHHHhCCC----CCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 7899998865541 569999999999999999999999 999999999999999754 468999999998
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
........... ..+. ........||..|.++....+...+.+.|+||++.++.|+..|..||.....
T Consensus 176 ~~~~~~~~~~~-------~~~~------r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 176 RFKYVGDSGGN-------LRPP------RPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred cccccCCCCcc-------cccC------CCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 43321111000 0000 0011345689999999999999999999999999999999999999955432
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
... ...+......... .. . ... ...++.+++..+-..+..++|....+...++...
T Consensus 243 ~~~--~~~~~~~~~~~~~-----~~-~--~~~---~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 243 TDL--KSKFEKDPRKLLT-----DR-F--GDL---KPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred cch--HHHHHHHhhhhcc-----cc-c--cCC---ChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 211 1111111111100 00 0 001 1223444555555589999999999999887654
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=1.1e-20 Score=197.94 Aligned_cols=260 Identities=27% Similarity=0.380 Sum_probs=192.3
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCcc---chHHHHHHHHHHhccCCC-CcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ---RFKEFQTEAEAIGKIRHP-NIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +|+++++++......+++++|+.+++
T Consensus 7 ~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 84 (384)
T COG0515 7 KLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGS 84 (384)
T ss_pred eecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCc
Confidence 5899999999999887 77899998765332 357799999999999988 79999999977777899999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC-CeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM-EPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~~~~ 528 (686)
+.+++...... ..++......++.|++.+++|+|+ .+++|||+||+||+++... .++++|||.++........
T Consensus 85 l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 85 LEDLLKKIGRK---GPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred HHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 99777654311 258889999999999999999999 8899999999999999888 7999999999854322211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC---CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV---RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
.... .......||..|+|||...+ ..++...|+||+|++++++++|..||...... ...
T Consensus 159 ~~~~-----------------~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-~~~ 220 (384)
T COG0515 159 SSIP-----------------ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-SAT 220 (384)
T ss_pred cccc-----------------ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-ccH
Confidence 0000 12345677889999999987 57889999999999999999999997543321 001
Q ss_pred HHHHHHHHhhcCC-cccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKP-MTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+.....+ ......+... ......+.+++.+|+..+|..|.++.+....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 221 SQTLKIILELPTPSLASPLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHHHHHhcCCcccccccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111111111111 1111111000 1123457788899999999999998887764
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=9.1e-23 Score=225.52 Aligned_cols=254 Identities=19% Similarity=0.226 Sum_probs=180.6
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcC----CC-Ccc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLG----NG-GWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~----~~-~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
..++|.|++|.|+.+... .....+.|.+. .. ... ....+..|..+-..++|||++..+..+.+.....-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 457999999977776543 23333333322 11 111 112266788888889999999888877777666666999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
|++ ||..++... ..++..++..++.|+..|++|+|+ .||.|||+|++|+++..++.+||+|||.+....-
T Consensus 403 ~~~-Dlf~~~~~~------~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 403 CPY-DLFSLVMSN------GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred ccH-HHHHHHhcc------cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeecc
Confidence 999 999999765 247888899999999999999999 8999999999999999999999999999876542
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCC-cchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQ-KWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.... ........+|+..|+|||++.+.+|.+ ..||||.|+++..|++|+.||......+.
T Consensus 473 ~~e~-------------------~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~ 533 (601)
T KOG0590|consen 473 PWEK-------------------NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDN 533 (601)
T ss_pred Ccch-------------------hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccccc
Confidence 2211 012334567888899999999988865 58999999999999999999965544332
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 663 (686)
.. .......... ....+. .-......+...++.+||+.||.+|.|+++|++
T Consensus 534 ~~---~~~~~~~~~~--~~~~~~----~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 534 SF---KTNNYSDQRN--IFEGPN----RLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ch---hhhccccccc--cccChH----HHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 21 0000000000 000000 001223445678899999999999999999975
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.2e-20 Score=182.53 Aligned_cols=202 Identities=20% Similarity=0.297 Sum_probs=168.4
Q ss_pred hcccCccCceEEEEEE-eCCCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 372 AFLLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+..||+|+||+++.|+ +-+++.||||.-...+. ..++..|.+..+.| ..++|...+-+..++.+-.+|+|.+ |.|
T Consensus 33 GkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPS 109 (449)
T KOG1165|consen 33 GKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPS 109 (449)
T ss_pred ccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcC
Confidence 4579999999999997 45689999998765432 35788899988888 4699999998888888899999999 789
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-----CCeEEeecCccccccc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-----MEPHISDFGLARLADI 524 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-----~~~kl~DfGla~~~~~ 524 (686)
|+|+..-.+ +.++..++..||.|++.-++|+|+ +.+|.|||||+|+||... ..+.++|||+|+.+.+
T Consensus 110 LEDLFD~Cg-----R~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 110 LEDLFDLCG-----RRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred HHHHHHHhc-----CcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 999887554 679999999999999999999999 899999999999999643 3589999999998765
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
........+ ....+..||..||+--...+.+-+.+-|.-|+|-|+.+.+-|..||.+...
T Consensus 182 p~TkqHIPY----------------rE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 182 PKTKQHIPY----------------REHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred ccccccCcc----------------ccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 443322222 233456789999999999999999999999999999999999999976543
No 413
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.85 E-value=2e-21 Score=185.47 Aligned_cols=138 Identities=18% Similarity=0.175 Sum_probs=107.8
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCcc--c-------hHH-----------------HHHHHHHHhccCCCCcc
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ--R-------FKE-----------------FQTEAEAIGKIRHPNIV 426 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~H~nIv 426 (686)
..||+|+||.||+|...+|+.||||+++..... . ..+ ...|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 369999999999999888999999998653211 0 112 23599999999888775
Q ss_pred eeeEEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHH-HccCCCCceecCCCCCCeee
Q 042348 427 SLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL-HEVSPKRYVHGDLRPSNILL 505 (686)
Q Consensus 427 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~L-H~~~~~~iiHrDlkp~NILl 505 (686)
....+.. ...++||||++++++....... ..+++.++..++.|++.+|+|+ |+ .+|+||||||+||++
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~------~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli 151 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWAAPRLKD------APLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLY 151 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCcchhhhc------CCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEE
Confidence 4433322 2348999999988776543222 3588899999999999999999 68 799999999999999
Q ss_pred cCCCCeEEeecCccccc
Q 042348 506 GKNMEPHISDFGLARLA 522 (686)
Q Consensus 506 ~~~~~~kl~DfGla~~~ 522 (686)
+ ++.++|+|||+|...
T Consensus 152 ~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 152 H-DGKLYIIDVSQSVEH 167 (190)
T ss_pred E-CCcEEEEEccccccC
Confidence 8 478999999999743
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=8e-21 Score=175.75 Aligned_cols=199 Identities=20% Similarity=0.314 Sum_probs=163.2
Q ss_pred ccCccCceEEEEEE-eCCCceEEEEEcCCCCccchHHHHHHHHHHhccCC-CCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 374 LLGKSTIGIVYKVA-LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRH-PNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
.||.|+||.+|.|. ..+|+.||||.-.... ...++..|.++...++| ..|..+..|..+..+-.+|||.+ |.||+
T Consensus 22 kiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLE 98 (341)
T KOG1163|consen 22 KIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLE 98 (341)
T ss_pred eecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHH
Confidence 59999999999997 5679999999875532 22467889999999975 78888888888889999999999 78999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC---CCCeEEeecCcccccccccCC
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK---NMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~~~~~~~~ 528 (686)
++..-.. +.++..+++-++-|++.-++|+|. ++.|||||||+|+|..- ...+.++|||+|+.+.+....
T Consensus 99 dLfnfC~-----R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 99 DLFNFCS-----RRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred HHHHHHh-----hhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 9987554 578999999999999999999999 89999999999999963 346889999999977543322
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
....+ .....-+||..|.+--...+.+-+.+.|+-|+|.+|.+.--|..||.+..
T Consensus 171 ~HIpy----------------re~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 171 QHIPY----------------REDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred ccCcc----------------ccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 11111 22335678889999888777777899999999999999999999996654
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=6.3e-21 Score=183.67 Aligned_cols=164 Identities=16% Similarity=0.171 Sum_probs=125.9
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCccchH---H------HHHHHHHHhccCCCCcceeeEEEEec-------
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFK---E------FQTEAEAIGKIRHPNIVSLRAYFWSV------- 435 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---~------~~~E~~~l~~l~H~nIv~l~~~~~~~------- 435 (686)
.+++|.|+||.||.+.. ++..+|||.+......... . +.+|++.+.++.|++|....+++...
T Consensus 36 ~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~ 114 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRY 114 (232)
T ss_pred EEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccc
Confidence 45799999999999766 4668999999754322211 2 68999999999999999999987644
Q ss_pred -CceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEe
Q 042348 436 -DEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHIS 514 (686)
Q Consensus 436 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 514 (686)
+..++||||++|.+|.++.. ++. ....+++.+++.+|+ .+++|||+||+||++++++ ++|+
T Consensus 115 ~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g-i~li 176 (232)
T PRK10359 115 AHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG-LRII 176 (232)
T ss_pred cCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-EEEE
Confidence 35789999999999988732 222 245699999999999 9999999999999999988 9999
Q ss_pred ecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHH
Q 042348 515 DFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589 (686)
Q Consensus 515 DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ell 589 (686)
|||..+........ ..+.....|..++|+||||+++....
T Consensus 177 Dfg~~~~~~e~~a~-----------------------------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 177 DLSGKRCTAQRKAK-----------------------------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ECCCcccccchhhH-----------------------------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99987644211100 01223344667899999999987654
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=1.2e-20 Score=198.93 Aligned_cols=219 Identities=25% Similarity=0.373 Sum_probs=165.0
Q ss_pred HhccCCCCcceeeEEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCc-ee
Q 042348 417 IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY-VH 495 (686)
Q Consensus 417 l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~i-iH 495 (686)
|+.+.|.|+.+++|.+.+....++|.+||..|+|.|.+.... ..++|--...++++|+.||+|+|+ .+| .|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~h 72 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLHN---SPIGYH 72 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHhc---Ccceee
Confidence 467899999999999999999999999999999999998743 568999999999999999999998 444 99
Q ss_pred cCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC----
Q 042348 496 GDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK---- 571 (686)
Q Consensus 496 rDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---- 571 (686)
+.++++|.++|....+||+|||+..+........ .........-|.|||.+....
T Consensus 73 g~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~---------------------~~~~~~~~~lw~aPellr~~~~~~~ 131 (484)
T KOG1023|consen 73 GALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPE---------------------AHHPIRKALLWTAPELLRGALSQSL 131 (484)
T ss_pred eeeccccceeeeeEEEEechhhhccccccccccc---------------------ccchhHHHHhccCHHHhcccccccc
Confidence 9999999999999999999999987664310000 000011223499999886631
Q ss_pred ---CCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhcc
Q 042348 572 ---PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCV 648 (686)
Q Consensus 572 ---~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl 648 (686)
.+.+.||||||++++|+++.+.||......... .+.+..+..+. ...+.|.+.... +....+..++.+||
T Consensus 132 ~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~~~---~~~~rP~i~~~~---e~~~~l~~l~~~cw 204 (484)
T KOG1023|consen 132 ESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKKGG---SNPFRPSIELLN---ELPPELLLLVARCW 204 (484)
T ss_pred cccccccCCeehHHHHHHHHHhccCccccccccCCh-HHHHHHHHhcC---CCCcCcchhhhh---hcchHHHHHHHHhc
Confidence 467899999999999999999999764443332 23333333311 112222222111 22336889999999
Q ss_pred ccCCCCCCCHHHHHHHHhccccc
Q 042348 649 HKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 649 ~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
..+|++||++++|-..++.+...
T Consensus 205 ~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 205 EEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccChhhCccHHHHHhhhhhhccc
Confidence 99999999999999999887653
No 417
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.83 E-value=2.9e-22 Score=175.80 Aligned_cols=177 Identities=31% Similarity=0.482 Sum_probs=157.9
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
.+.++.|-|++|+|+ .+|+.+..|.+|+.|++++|+|+ .+|..++++++|+.|+++-|++. .+|..||.++.|++||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 357889999999999 68899999999999999999999 89999999999999999999998 8999999999999999
Q ss_pred ccCCCCC-CCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccc
Q 042348 136 LSQNSFS-SSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVD 214 (686)
Q Consensus 136 ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~ 214 (686)
|++|++. ..+|..|..+..|+.|+|++|.|. .+|..++ +|++|+.|.|.+|.+- ..|.+++.|..|+.| .
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg-~lt~lqil~lrdndll-~lpkeig~lt~lrel------h 179 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVG-KLTNLQILSLRDNDLL-SLPKEIGDLTRLREL------H 179 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhh-hhcceeEEeeccCchh-hCcHHHHHHHHHHHH------h
Confidence 9999987 468999999999999999999998 7898885 8999999999999998 469999999999877 8
Q ss_pred ccCCCCCCCcccccccccC---CcccccCCCCC
Q 042348 215 LTYNNLSGLIPQNAALLSL---GPTAFIGNPFL 244 (686)
Q Consensus 215 l~~N~l~~~~p~~~~~~~~---~~~~~~~n~~~ 244 (686)
+.+|+++..+|+...+.-. .....+.|||.
T Consensus 180 iqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 180 IQGNRLTVLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred cccceeeecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 9999999998887653322 23345677776
No 418
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.82 E-value=3.7e-21 Score=202.11 Aligned_cols=225 Identities=21% Similarity=0.298 Sum_probs=177.1
Q ss_pred ccCccCceEEEEEE----eCCCceEEEEEcCCCCccc--hHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccC
Q 042348 374 LLGKSTIGIVYKVA----LNNEEAVAVRRLGNGGWQR--FKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
++|.|.||.|+.++ ...+..+|+|..++..... ......|..++..++ ||.+|++...++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999864 2346678888876542211 124567888888886 9999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|...+.... .+++.....+...++-|++++|+ .+|+|||+|++||+++.+|++++.|||+++..-..+
T Consensus 81 gg~lft~l~~~~------~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~ 151 (612)
T KOG0603|consen 81 GGDLFTRLSKEV------MFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK 151 (612)
T ss_pred cchhhhccccCC------chHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhh
Confidence 999999887653 46777788888899999999999 899999999999999999999999999998653222
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
..+||+-|||||++. .....+|.||||++++||+||..||..
T Consensus 152 ---------------------------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--------- 193 (612)
T KOG0603|consen 152 ---------------------------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--------- 193 (612)
T ss_pred ---------------------------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---------
Confidence 126788899999998 457789999999999999999999954
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM 658 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 658 (686)
+....+...+..++. .......+++..++..+|..|--.
T Consensus 194 ~~~~~Il~~~~~~p~-------------~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 194 DTMKRILKAELEMPR-------------ELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHhhhccCCch-------------hhhHHHHHHHHHHHhhCHHHHhcc
Confidence 223444443333332 223345577778888999999654
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=6.5e-20 Score=172.53 Aligned_cols=194 Identities=16% Similarity=0.186 Sum_probs=136.3
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccc----hHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR----FKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..|++|+||+||.+.. .+..++.+.+.....-. ...+.+|+++|+++. |++|++++++ +..+++|||+.|
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G 82 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAG 82 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecC
Confidence 4699999999997766 57778888776654321 125889999999995 5889999886 457999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCC-CCCCeeecCCCCeEEeecCccccccccc
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL-RPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDl-kp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
.+|.+.+.. ....++.|++.+|+++|+ +||+|||| ||+|||++.++.++|+|||+|.......
T Consensus 83 ~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 83 AAMYQRPPR-------------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ccHHhhhhh-------------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 998754321 113578899999999999 99999999 7999999999999999999998543211
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCC-CcchHHHHHHHHHHHHhCCCCccc
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPT-QKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
........+. ...........+..|++|+...-. ..+ ...+.++-|.-+|.++|+..|...
T Consensus 147 ~~~r~L~~rD----------l~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 147 RWMRLLARED----------LRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred hHHHHHHHHH----------HHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0000000000 000000012245567777744321 223 467888999999999999988743
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=1.1e-19 Score=174.29 Aligned_cols=138 Identities=19% Similarity=0.264 Sum_probs=109.3
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCcc--c------------------------hHHHHHHHHHHhccCCCCcce
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ--R------------------------FKEFQTEAEAIGKIRHPNIVS 427 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~H~nIv~ 427 (686)
.||+|++|.||+|...+|+.||||+++..... . ...+..|.+.+.++.|++|..
T Consensus 4 ~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (190)
T cd05145 4 CISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPV 83 (190)
T ss_pred eeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 59999999999999878999999998654211 0 112457899999999998865
Q ss_pred eeEEEEecCceeEEEeccCCCCHHHH-hhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec
Q 042348 428 LRAYFWSVDEKLLIYDYIPNGSLATA-IHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG 506 (686)
Q Consensus 428 l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~ 506 (686)
...+... ..++||||++++++... +.. ..++..+..+++.|++.++.++|+. .+|+||||||+||+++
T Consensus 84 p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-------~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll~ 152 (190)
T cd05145 84 PEPILLK--KNVLVMEFIGDDGSPAPRLKD-------VPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNILYH 152 (190)
T ss_pred ceEEEec--CCEEEEEEecCCCchhhhhhh-------ccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEEEE
Confidence 5444332 34899999998865443 322 2467888999999999999999973 5899999999999998
Q ss_pred CCCCeEEeecCcccccc
Q 042348 507 KNMEPHISDFGLARLAD 523 (686)
Q Consensus 507 ~~~~~kl~DfGla~~~~ 523 (686)
++.++|+|||+++...
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 8899999999998654
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.81 E-value=1.7e-19 Score=173.63 Aligned_cols=134 Identities=18% Similarity=0.210 Sum_probs=105.6
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhcc-----CCCCcceeeEEEEecC---cee-EEEe
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-----RHPNIVSLRAYFWSVD---EKL-LIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~nIv~l~~~~~~~~---~~~-lV~e 443 (686)
..||+|+||.||. .++....+||++........+.+.+|+++++++ +||||++++|++.++. ..+ +|+|
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 4799999999996 443333478988765444567899999999999 5799999999999874 333 7899
Q ss_pred c--cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHH-HHHHccCCCCceecCCCCCCeeecC----CCCeEEee-
Q 042348 444 Y--IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGI-AFLHEVSPKRYVHGDLRPSNILLGK----NMEPHISD- 515 (686)
Q Consensus 444 ~--~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL-~~LH~~~~~~iiHrDlkp~NILl~~----~~~~kl~D- 515 (686)
| +++|+|.+++... .+++. ..++.+++.++ +|||+ ++|+||||||+|||++. +..++|+|
T Consensus 86 ~~G~~~~tL~~~l~~~-------~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 86 FDGKPSITLTEFAEQC-------RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred CCCCcchhHHHHHHcc-------cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 9 5689999999652 24444 36688888888 99999 99999999999999974 34799999
Q ss_pred cCccc
Q 042348 516 FGLAR 520 (686)
Q Consensus 516 fGla~ 520 (686)
||...
T Consensus 154 ~G~~~ 158 (210)
T PRK10345 154 IGEST 158 (210)
T ss_pred CCCcc
Confidence 55443
No 422
>PLN03150 hypothetical protein; Provisional
Probab=99.81 E-value=2.6e-19 Score=201.27 Aligned_cols=137 Identities=36% Similarity=0.626 Sum_probs=86.0
Q ss_pred CChhHHHHHHHHHHhccCCCCCCCCCCCCCCCc-----ceeeeEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEcc
Q 042348 15 SANDEGLALLSFKQAIRNFPEGNNWNNSNEDPC-----SWNGITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLR 89 (686)
Q Consensus 15 ~~~~~~~~l~~~k~~~~~~~~~~~w~~~~~~~c-----~w~gv~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~ 89 (686)
....|..||+.+|+.+. .+...+|+ ++|| .|.||.|..... + ....++.|+|+
T Consensus 369 t~~~~~~aL~~~k~~~~-~~~~~~W~---g~~C~p~~~~w~Gv~C~~~~~----------~--------~~~~v~~L~L~ 426 (623)
T PLN03150 369 TLLEEVSALQTLKSSLG-LPLRFGWN---GDPCVPQQHPWSGADCQFDST----------K--------GKWFIDGLGLD 426 (623)
T ss_pred cCchHHHHHHHHHHhcC-CcccCCCC---CCCCCCcccccccceeeccCC----------C--------CceEEEEEECC
Confidence 34568999999999985 34335685 3677 699999952110 0 00124455666
Q ss_pred CCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCC
Q 042348 90 NNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPL 169 (686)
Q Consensus 90 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 169 (686)
+|.++|.+|.++.++++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.+|..++++++|+.|+|++|+|+|.+
T Consensus 427 ~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~i 506 (623)
T PLN03150 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506 (623)
T ss_pred CCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccC
Confidence 66666666666666666666666666666666666666677777777777776666666655555555555555555555
Q ss_pred chhh
Q 042348 170 PDGF 173 (686)
Q Consensus 170 p~~~ 173 (686)
|..+
T Consensus 507 P~~l 510 (623)
T PLN03150 507 PAAL 510 (623)
T ss_pred ChHH
Confidence 5443
No 423
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=1.4e-20 Score=207.08 Aligned_cols=250 Identities=20% Similarity=0.286 Sum_probs=173.7
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCC-ccchHHHHHHHHH--HhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGG-WQRFKEFQTEAEA--IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.+|+++|=.|.+++.+.|. |+||++-+.. .-..+.|.++++- ...++|||++++.-+-....-.|+|=+|..+ +
T Consensus 29 ~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-n 106 (1431)
T KOG1240|consen 29 ENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-N 106 (1431)
T ss_pred cccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhh-h
Confidence 45999999999999999887 8899885543 3334444443333 4555899999998877777778899999965 9
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|+|.+..+ ..|...+.+-|+.|++.||..+|. .+|+|||||.+||||..-.-+.|+||..-|..--.+..+
T Consensus 107 LyDRlSTR------PFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 107 LYDRLSTR------PFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred hhhhhccc------hHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 99998765 347777888899999999999999 899999999999999999999999998665322111111
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC----------C-CCCcchHHHHHHHHHHHHh-CCCCccc
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR----------K-PTQKWDIYSYGVILLEMIS-GKLPMIQ 597 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDVwSlGvvl~ellt-G~~P~~~ 597 (686)
. .+.+.. ........|+|||.+... . .+++.||||+|||+.||++ |++||.-
T Consensus 178 a---------------df~fFF-DTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L 241 (1431)
T KOG1240|consen 178 A---------------DFTFFF-DTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL 241 (1431)
T ss_pred c---------------cceEEE-ecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH
Confidence 0 011111 112223359999976431 1 5788999999999999999 7888821
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcc-cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPF-LAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
.+... ...+. ..++. +.... +-..+..++..|++.||++|-++++.++.-..
T Consensus 242 --------SQL~a-Yr~~~-----~~~~e~~Le~I----ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 242 --------SQLLA-YRSGN-----ADDPEQLLEKI----EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred --------HHHHh-HhccC-----ccCHHHHHHhC----cCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 11110 00010 01110 00000 11146689999999999999999999887444
No 424
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=1.3e-18 Score=172.83 Aligned_cols=229 Identities=20% Similarity=0.267 Sum_probs=142.5
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCC---CccchHHHHHHHHHHhccCC----------CCcceeeEEEEe----
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRH----------PNIVSLRAYFWS---- 434 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H----------~nIv~l~~~~~~---- 434 (686)
..||.|+++.||.++..+ ++.+|||.+... .....+++.+|.-....+.+ -.++.-++...-
T Consensus 18 ~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~ 97 (288)
T PF14531_consen 18 RIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKP 97 (288)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-
T ss_pred cccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCC
Confidence 469999999999999874 889999987432 23345667777766555432 222222222221
Q ss_pred -----cC--------ceeEEEeccCCCCHHHHhhc---CCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCC
Q 042348 435 -----VD--------EKLLIYDYIPNGSLATAIHG---KAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDL 498 (686)
Q Consensus 435 -----~~--------~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDl 498 (686)
.. ..+++|+-+ .+||.+++.. .... ...+....++.+..|+++.+++||+ .|++|+||
T Consensus 98 ~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~--~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHgdi 171 (288)
T PF14531_consen 98 PFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT--HSPLAFAARLSLTVQMIRLVANLHS---YGLVHGDI 171 (288)
T ss_dssp SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT--SHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEST-
T ss_pred cceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc--cchhHHHHHHHHHHHHHHHHHHHhh---cceEeccc
Confidence 11 236678877 5688888653 1110 1234456667888999999999999 99999999
Q ss_pred CCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC--------C
Q 042348 499 RPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--------R 570 (686)
Q Consensus 499 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~ 570 (686)
||+|++++.+|.++|+||+.......... ....+..|.+||.... -
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~--------------------------~~~~~~~~~PPe~~~~~~~~~~~~~ 225 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYR--------------------------CSEFPVAFTPPELESCAGQFGQNNA 225 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEE--------------------------GGGS-TTTS-HHHHHHHTSCHHSEE
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceee--------------------------ccCCCcccCChhhhhhhcccCcccc
Confidence 99999999999999999987764332110 0112345889996633 2
Q ss_pred CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhcccc
Q 042348 571 KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHK 650 (686)
Q Consensus 571 ~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~ 650 (686)
.++.+.|.|++|+++|.|.+|..||........... .+.. .. +-++.+..|+..+|++
T Consensus 226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-------------------~f~~--C~-~~Pe~v~~LI~~lL~~ 283 (288)
T PF14531_consen 226 PYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-------------------DFSR--CR-DMPEPVQFLIRGLLQR 283 (288)
T ss_dssp EE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-------------------GGTT--SS----HHHHHHHHHHT-S
T ss_pred eeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-------------------cchh--cC-CcCHHHHHHHHHHccC
Confidence 478899999999999999999999954322211000 1111 11 3455688899999999
Q ss_pred CCCCC
Q 042348 651 SPDKR 655 (686)
Q Consensus 651 dP~~R 655 (686)
||++|
T Consensus 284 ~~~~R 288 (288)
T PF14531_consen 284 NPEDR 288 (288)
T ss_dssp SGGGS
T ss_pred CcccC
Confidence 99988
No 425
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=4.5e-18 Score=168.32 Aligned_cols=201 Identities=20% Similarity=0.307 Sum_probs=139.3
Q ss_pred CCCCcceeeEEEEe---------------------------cCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHH
Q 042348 421 RHPNIVSLRAYFWS---------------------------VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLR 473 (686)
Q Consensus 421 ~H~nIv~l~~~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 473 (686)
+|||||++.++|.+ +...|+||.-++. +|.+++-.+ ..+.....-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-------~~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-------HRSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-------CCchHHHHH
Confidence 59999999998854 2235899998865 999998764 355666777
Q ss_pred HHHHHHHHHHHHHccCCCCceecCCCCCCeeec--CCC--CeEEeecCcccccccccCCccccccccccCCCCCCCcccc
Q 042348 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG--KNM--EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549 (686)
Q Consensus 474 i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~--~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 549 (686)
|+.|+++|..|||. ++|.|||+|++|||+. +|+ ...|+|||++-.-+..+ -...+ +
T Consensus 346 ~laQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hG--lqlpy--------------~- 405 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHG--LQLPY--------------E- 405 (598)
T ss_pred HHHHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccc--ccccc--------------c-
Confidence 89999999999999 9999999999999994 444 46889999875322110 00000 0
Q ss_pred ccccCCCCCccccCcccccCCC------CCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCccccc
Q 042348 550 TALNSTTSRSYYQAPEASKVRK------PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDIL 623 (686)
Q Consensus 550 ~~~~~~~gt~~y~aPE~~~~~~------~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (686)
...-...|...-||||+....+ --.|+|.|+.|.+.||+++...||...+..-.+...+-+. +-.++++-
T Consensus 406 S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~---qLPalp~~- 481 (598)
T KOG4158|consen 406 SDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES---QLPALPSR- 481 (598)
T ss_pred cccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh---hCCCCccc-
Confidence 1112334566789999876532 2458999999999999999999997755544433331111 11122222
Q ss_pred CcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 624 DPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 624 d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
+...+.+++...|+.||++|++..-....|
T Consensus 482 ------------vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 482 ------------VPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred ------------CChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 223466888899999999999876555544
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=1.7e-17 Score=162.42 Aligned_cols=133 Identities=20% Similarity=0.364 Sum_probs=113.0
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCcc--------chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ--------RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
.||+|++|.||+|.. .+..|++|........ ....+.+|++++..+.|++|+....++...+..++||||+
T Consensus 3 ~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 3 LIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred ccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 589999999999987 5677889976543211 1245788999999999999988888887788889999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
+|++|.+++... .+ .+..++.+++.+|+++|+ .+++|||++|+||+++ ++.++|+|||.++.
T Consensus 82 ~G~~L~~~~~~~---------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSN---------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhc---------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999998642 12 788999999999999999 8999999999999999 78999999999874
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.74 E-value=1.5e-17 Score=164.30 Aligned_cols=137 Identities=15% Similarity=0.160 Sum_probs=106.6
Q ss_pred hcccCccCceEEEEEE--eCCCceEEEEEcCCCCcc------------------------chHHHHHHHHHHhccCCC--
Q 042348 372 AFLLGKSTIGIVYKVA--LNNEEAVAVRRLGNGGWQ------------------------RFKEFQTEAEAIGKIRHP-- 423 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H~-- 423 (686)
...||+|++|.||+|. ..+|+.||+|.+...... ....+..|++.+.++.+.
T Consensus 33 ~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i 112 (237)
T smart00090 33 GGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGV 112 (237)
T ss_pred CCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3469999999999998 567999999988643210 012356899999999753
Q ss_pred CcceeeEEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC-ceecCCCCCC
Q 042348 424 NIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR-YVHGDLRPSN 502 (686)
Q Consensus 424 nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-iiHrDlkp~N 502 (686)
.+.+++++ ...++||||+++++|....... ..+...+...++.|++.++++||+ .+ |+||||||+|
T Consensus 113 ~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~N 179 (237)
T smart00090 113 PVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD------VEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYN 179 (237)
T ss_pred CCCeeeEe----cCceEEEEEecCCccccccccc------CCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhh
Confidence 34444443 2458999999998887654322 234556678999999999999999 88 9999999999
Q ss_pred eeecCCCCeEEeecCccccc
Q 042348 503 ILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 503 ILl~~~~~~kl~DfGla~~~ 522 (686)
|+++ ++.++|+|||.+...
T Consensus 180 Ili~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEEE-CCCEEEEEChhhhcc
Confidence 9999 889999999998743
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=2.7e-17 Score=159.40 Aligned_cols=130 Identities=22% Similarity=0.370 Sum_probs=107.2
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCc--------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGW--------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
+||+|+||.||+|.+ ++..|++|....... ....++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 467899998643211 11356778999999999887766666666677789999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
+|++|.+++.... . .++.+++.+|++||+ .+++|||++|.||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~~------~-------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN------D-------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH------H-------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999875421 0 789999999999999 8999999999999999 88999999999874
No 429
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=1.7e-17 Score=186.87 Aligned_cols=189 Identities=19% Similarity=0.273 Sum_probs=148.6
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccC---CCCcceeeEEEEecCceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR---HPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
...||+|+||.||+|...+|+.||+|.-+....-+ |--=.+++.||+ -+-|..+...+.-.+.-++|+||.+.|
T Consensus 703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~G 779 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYG 779 (974)
T ss_pred EeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccc
Confidence 45699999999999998889999999876543222 111122333333 345556666666677889999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec-------CCCCeEEeecCcccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG-------KNMEPHISDFGLARL 521 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~-------~~~~~kl~DfGla~~ 521 (686)
+|.+++... +.++|..++.+..|+++-+++||. .+|||+||||+|.||. +...++|+|||.+-.
T Consensus 780 tlld~~N~~------~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 780 TLLDLINTN------KVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred cHHHhhccC------CCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 999999843 568999999999999999999999 8999999999999994 234689999999875
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCC
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~ 593 (686)
+..-... +......+|-.+--+|+..+..++..+|-|.+..+++-|+.|+.
T Consensus 851 m~lfp~~---------------------~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 851 MKLFPDG---------------------TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeEcCCC---------------------cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 5422111 23345566778999999999999999999999999999999983
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=6.5e-17 Score=180.16 Aligned_cols=133 Identities=25% Similarity=0.387 Sum_probs=108.5
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCC-Cc------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNG-GW------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~-~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
.+.||+|+||.||+|.+.+...++.+++... .. ...+++.+|++++.+++|++++....++...+..++||||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~ 417 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEY 417 (535)
T ss_pred cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEe
Confidence 4579999999999998765443332222221 11 1235688999999999999999988888887888999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
+++++|.+++. ....++.+++.+|+|||+ .+++||||||+||++ +++.++|+|||+++..
T Consensus 418 ~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 418 IGGKDLKDVLE--------------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred cCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 99999998874 346789999999999999 899999999999999 6789999999999754
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1e-16 Score=155.01 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=105.1
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCc--c--------------------chHHHHHHHHHHhccCCC--Ccce
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW--Q--------------------RFKEFQTEAEAIGKIRHP--NIVS 427 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~--------------------~~~~~~~E~~~l~~l~H~--nIv~ 427 (686)
.+.||+|+||.||++...+|+.||||++..... . ....+..|+.++.++.|+ .+++
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~ 99 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK 99 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence 457999999999999988899999998654220 0 012367899999999887 4444
Q ss_pred eeEEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC
Q 042348 428 LRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK 507 (686)
Q Consensus 428 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~ 507 (686)
.++ ....++||||+++++|.++... .....++.+++.++.++|+ .+|+||||||+||++++
T Consensus 100 ~~~----~~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill~~ 160 (198)
T cd05144 100 PID----WNRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNILVDD 160 (198)
T ss_pred eee----cCCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEEEcC
Confidence 443 2456899999999998765321 2346788999999999999 89999999999999999
Q ss_pred CCCeEEeecCccccc
Q 042348 508 NMEPHISDFGLARLA 522 (686)
Q Consensus 508 ~~~~kl~DfGla~~~ 522 (686)
++.++|+|||++...
T Consensus 161 ~~~~~liDfg~~~~~ 175 (198)
T cd05144 161 DEKIYIIDWPQMVST 175 (198)
T ss_pred CCcEEEEECCccccC
Confidence 999999999999644
No 432
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.70 E-value=1.9e-18 Score=178.47 Aligned_cols=194 Identities=23% Similarity=0.243 Sum_probs=153.4
Q ss_pred eeEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCC
Q 042348 51 GITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKY 130 (686)
Q Consensus 51 gv~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 130 (686)
|++-.-..+..|+|..|+++..-.+++.+|++|+.|+||+|.|+..-+..+.-.++|++|+|++|+|+..-+..|..|..
T Consensus 263 G~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~ 342 (873)
T KOG4194|consen 263 GAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQ 342 (873)
T ss_pred cceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHH
Confidence 44333356778888888888877788888888888888888888777788888888888888888888767777888888
Q ss_pred CCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchh--hhhcCcccceecccccccCCCCchhhhccccccccc
Q 042348 131 LQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDG--FATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLA 208 (686)
Q Consensus 131 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ 208 (686)
|++|+|++|.++..-...|..+.+|+.|+|++|.+++.|.++ .+.+|++|+.|+|.+|+|..+.-..|..|.+|..|
T Consensus 343 Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~L- 421 (873)
T KOG4194|consen 343 LEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHL- 421 (873)
T ss_pred hhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCccccee-
Confidence 888888888888666777888888888888888888766542 23568888888888888887767778887777655
Q ss_pred ccccccccCCCCCCCcccccccccCCcccccCCCCCCCCCCC
Q 042348 209 QRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGPPLK 250 (686)
Q Consensus 209 ~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~~ 250 (686)
||.+|-+..+-|..+.-..+..+-+..-.++|++.+.
T Consensus 422 -----dL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql~ 458 (873)
T KOG4194|consen 422 -----DLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQLK 458 (873)
T ss_pred -----cCCCCcceeecccccccchhhhhhhcccceEEeccHH
Confidence 9999999988888877667777777788889988653
No 433
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=1.1e-17 Score=172.85 Aligned_cols=180 Identities=24% Similarity=0.344 Sum_probs=130.1
Q ss_pred ceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeec
Q 042348 437 EKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDF 516 (686)
Q Consensus 437 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 516 (686)
..++.|++|...+|.+||..+... ...++...+.++.|++.|++| ++.+|||+||.||+...+..+||.||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~---e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDF 400 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTG---EERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDF 400 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcc---cccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhh
Confidence 468999999999999999865432 457888899999999999999 47899999999999999999999999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCc
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPM 595 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~ 595 (686)
|+......... + .......+..+||..||+||.+.+..|+.|+||||||++++|+++ =..++
T Consensus 401 gl~ts~~~~~~-------------~----~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~ 463 (516)
T KOG1033|consen 401 GLVTSQDKDET-------------V----APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF 463 (516)
T ss_pred hheeecccCCc-------------c----cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH
Confidence 99875543320 0 011234456788999999999999999999999999999999998 22233
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC 662 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 662 (686)
.... ....+.. ..++|....+.. .-..++.+++...|.+||++.++.
T Consensus 464 er~~--------t~~d~r~------g~ip~~~~~d~p------~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 464 ERIA--------TLTDIRD------GIIPPEFLQDYP------EEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred HHHH--------hhhhhhc------CCCChHHhhcCc------HHHHHHHHhcCCCcccCchHHHHh
Confidence 1110 0111111 112221111111 234678899999999999555543
No 434
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.69 E-value=4e-18 Score=168.68 Aligned_cols=193 Identities=23% Similarity=0.322 Sum_probs=151.0
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccC-CCCCCCCcccccCCCCCCEEe
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSG-NSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~ 135 (686)
...+.|+|..|+|+...|..|+.+++|++||||+|+|+.+-|.+|.++++|..|-|-+ |+|+...-..|++|.+|+.|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 4678899999999988888999999999999999999988999999999988876666 999865556788888777777
Q ss_pred ccCCCCCCCCChhhhhccccccccccccccC-------------------------------------------------
Q 042348 136 LSQNSFSSSIPSSIVQCKRLKTVVLNQNSFT------------------------------------------------- 166 (686)
Q Consensus 136 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~------------------------------------------------- 166 (686)
+.-|++.-.....|..+++|..|.|.+|.+.
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 7777776555555665655555555544432
Q ss_pred ------------------------------------CCCchhhhhcCcccceecccccccCCCCchhhhcccccccc---
Q 042348 167 ------------------------------------GPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL--- 207 (686)
Q Consensus 167 ------------------------------------~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l--- 207 (686)
+.-|...+..|++|+.|||++|+++++-+.+|..+..++.|
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~ 306 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLT 306 (498)
T ss_pred chHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcC
Confidence 01122223578999999999999999999999988887655
Q ss_pred ---------------cccccccccCCCCCCCcccccc-cccCCcccccCCCCCCCCCC
Q 042348 208 ---------------AQRVYVDLTYNNLSGLIPQNAA-LLSLGPTAFIGNPFLCGPPL 249 (686)
Q Consensus 208 ---------------~~~~~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~~~c~~p~ 249 (686)
..+..|+|..|+|+..-|..++ ...+..+.+.+|||.|.+.+
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l 364 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRL 364 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccch
Confidence 2456789999999998887765 44567788999999998754
No 435
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.66 E-value=1.1e-16 Score=176.59 Aligned_cols=212 Identities=21% Similarity=0.295 Sum_probs=139.1
Q ss_pred hcccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 372 AFLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.++|..|+||.||.++++. .+..|+| +.+... +.+- ++.....|.+| ||-
T Consensus 88 IklisngAygavylvrh~~trqrfa~k-iNkq~l-----ilRn--ilt~a~npfvv---------------------gDc 138 (1205)
T KOG0606|consen 88 IKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----ILRN--ILTFAGNPFVV---------------------GDC 138 (1205)
T ss_pred eEeeccCCCCceeeeeccccccchhhc-ccccch-----hhhc--cccccCCccee---------------------chh
Confidence 3468999999999998774 4567773 333211 1110 33333344433 444
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
...+... ..++.. ++.+++|||+ .+|+|||+||+|.+|..-|++|+.|||+++..-..-..
T Consensus 139 ~tllk~~------g~lPvd--------mvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at-- 199 (1205)
T KOG0606|consen 139 ATLLKNI------GPLPVD--------MVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT-- 199 (1205)
T ss_pred hhhcccC------CCCcch--------hhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccc--
Confidence 4444432 223322 2789999999 99999999999999999999999999999854321110
Q ss_pred ccccccccCCCCCCCcc-cc---ccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 531 VHWEQSTTGTPLQSSPY-EF---TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~-~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
..+.... .. ......+||+.|+|||++..+.|+..+|+|++|+|+||.+.|+.||.....++
T Consensus 200 ----------nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee---- 265 (1205)
T KOG0606|consen 200 ----------NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---- 265 (1205)
T ss_pred ----------hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH----
Confidence 0000000 00 11234588999999999999999999999999999999999999996654433
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP 656 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 656 (686)
.+..++.+...+++- |.. ...+..+++.+.|+.+|..|-
T Consensus 266 -lfg~visd~i~wpE~-dea---------~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 266 -LFGQVISDDIEWPEE-DEA---------LPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred -HHhhhhhhhcccccc-CcC---------CCHHHHHHHHHHHHhChHhhc
Confidence 233333333333332 221 223566788889999999994
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.65 E-value=5.1e-18 Score=149.26 Aligned_cols=161 Identities=29% Similarity=0.456 Sum_probs=141.4
Q ss_pred cCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccc
Q 042348 77 LGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLK 156 (686)
Q Consensus 77 l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 156 (686)
+-+++.++.|-||+|+++ .+|+.+.++.+|+.|++++|+++ .+|..++.|+.|+.|+++.|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 556788899999999999 88999999999999999999998 89999999999999999999998 8999999999999
Q ss_pred cccccccccCC-CCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCcccccccccCCc
Q 042348 157 TVVLNQNSFTG-PLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGP 235 (686)
Q Consensus 157 ~L~L~~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~ 235 (686)
.|+|.+|+++. .+|..|+ .++.|+.|+|++|.|. .+|.++++|++|+.| .+..|.+-..+-+...+..+..
T Consensus 106 vldltynnl~e~~lpgnff-~m~tlralyl~dndfe-~lp~dvg~lt~lqil------~lrdndll~lpkeig~lt~lre 177 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFF-YMTTLRALYLGDNDFE-ILPPDVGKLTNLQIL------SLRDNDLLSLPKEIGDLTRLRE 177 (264)
T ss_pred hhhccccccccccCCcchh-HHHHHHHHHhcCCCcc-cCChhhhhhcceeEE------eeccCchhhCcHHHHHHHHHHH
Confidence 99999999974 5788887 7999999999999999 678899999998866 8899998876666556666666
Q ss_pred ccccCCCCCCCCC
Q 042348 236 TAFIGNPFLCGPP 248 (686)
Q Consensus 236 ~~~~~n~~~c~~p 248 (686)
+-..||....-||
T Consensus 178 lhiqgnrl~vlpp 190 (264)
T KOG0617|consen 178 LHIQGNRLTVLPP 190 (264)
T ss_pred HhcccceeeecCh
Confidence 7778887654444
No 437
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.65 E-value=1.5e-15 Score=150.31 Aligned_cols=137 Identities=20% Similarity=0.200 Sum_probs=107.4
Q ss_pred HhhcccC-ccCceEEEEEEeCCCceEEEEEcCCCC-------------ccchHHHHHHHHHHhccCCCCc--ceeeEEEE
Q 042348 370 ASAFLLG-KSTIGIVYKVALNNEEAVAVRRLGNGG-------------WQRFKEFQTEAEAIGKIRHPNI--VSLRAYFW 433 (686)
Q Consensus 370 ~~~~~iG-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~nI--v~l~~~~~ 433 (686)
....+|| .|+.|+||++... +..++||++.... ......+.+|++++.+++|++| ++.+++..
T Consensus 34 ~~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~ 112 (239)
T PRK01723 34 QQARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARV 112 (239)
T ss_pred hcCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeee
Confidence 4456798 8999999999886 6678998875321 1223567889999999998875 67777754
Q ss_pred ecCc----eeEEEeccCC-CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC
Q 042348 434 SVDE----KLLIYDYIPN-GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN 508 (686)
Q Consensus 434 ~~~~----~~lV~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~ 508 (686)
.... .++||||+++ .+|.+++... .++.. .+.+++.+|++||+ +||+||||||.|||++.+
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~ 178 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQEA-------PLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPD 178 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhcC-------CCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCC
Confidence 4322 2599999997 6999988642 24433 36789999999999 999999999999999998
Q ss_pred CCeEEeecCcccc
Q 042348 509 MEPHISDFGLARL 521 (686)
Q Consensus 509 ~~~kl~DfGla~~ 521 (686)
+.++|+|||.+..
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 8999999998864
No 438
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.63 E-value=6.7e-17 Score=167.11 Aligned_cols=164 Identities=21% Similarity=0.286 Sum_probs=112.5
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEecc
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLS 137 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 137 (686)
.+..|+|++|.++..--..|.+|.+|..|.|+.|+++...+..|.+|++|+.|+|..|++.-.--..|.+|++|+.|.|.
T Consensus 174 ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklq 253 (873)
T KOG4194|consen 174 NIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQ 253 (873)
T ss_pred CceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhh
Confidence 67888888888888777888888888888888888884445556668888888888888863225566777777777777
Q ss_pred CCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccC
Q 042348 138 QNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTY 217 (686)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~ 217 (686)
.|.++..-.+.|..|.++++|+|+.|+++. +-.++.-+|++|+.||||+|.|..+-++.+.-+++|..| ||++
T Consensus 254 rN~I~kL~DG~Fy~l~kme~l~L~~N~l~~-vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~L------dLs~ 326 (873)
T KOG4194|consen 254 RNDISKLDDGAFYGLEKMEHLNLETNRLQA-VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKEL------DLSS 326 (873)
T ss_pred hcCcccccCcceeeecccceeecccchhhh-hhcccccccchhhhhccchhhhheeecchhhhcccceeE------eccc
Confidence 777665556666666666677777666663 322222356666666666666666666666666666544 6666
Q ss_pred CCCCCCccccc
Q 042348 218 NNLSGLIPQNA 228 (686)
Q Consensus 218 N~l~~~~p~~~ 228 (686)
|+++...++.+
T Consensus 327 N~i~~l~~~sf 337 (873)
T KOG4194|consen 327 NRITRLDEGSF 337 (873)
T ss_pred cccccCChhHH
Confidence 66665555443
No 439
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.63 E-value=9.7e-18 Score=166.14 Aligned_cols=173 Identities=28% Similarity=0.442 Sum_probs=153.0
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEecc
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLS 137 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 137 (686)
.+..++..+|+++ .+|++++++.+|..|++.+|++. .+|++.-+++.|+.||..+|.++ .+|+.++.|.+|..|||.
T Consensus 138 ~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~ 214 (565)
T KOG0472|consen 138 DLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLR 214 (565)
T ss_pred hhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhh
Confidence 4556778899998 58889999999999999999998 66666667999999999999997 899999999999999999
Q ss_pred CCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccC
Q 042348 138 QNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTY 217 (686)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~ 217 (686)
.|++. .+| +|.+|..|.+|+++.|++. .+|.+...+|.+|..|||.+|+++ ..|+.+.-|.+|.. ||+|+
T Consensus 215 ~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~r------LDlSN 284 (565)
T KOG0472|consen 215 RNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLER------LDLSN 284 (565)
T ss_pred hcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhh------hcccC
Confidence 99998 688 8999999999999999998 799999889999999999999999 56998888877765 49999
Q ss_pred CCCCCCcccccccccCCcccccCCCCC
Q 042348 218 NNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 218 N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
|.+++.+++...+ .+....+.|||.-
T Consensus 285 N~is~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 285 NDISSLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred CccccCCcccccc-eeeehhhcCCchH
Confidence 9999988876665 7777888899853
No 440
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=3.9e-15 Score=137.15 Aligned_cols=133 Identities=21% Similarity=0.202 Sum_probs=112.8
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCC--CCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRH--PNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
.||+|.++.||++...+ ..+++|....... ...+.+|+.++..++| .+++++++++...+..+++|||++++.+.
T Consensus 5 ~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~ 81 (155)
T cd05120 5 LLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD 81 (155)
T ss_pred ecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence 58999999999999865 6799999866433 4678999999999976 59999999988888899999999887665
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
.+ +......++.+++.+|+++|.....+++|+|++|+||++++++.++++|||.++..
T Consensus 82 ~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 82 EV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 43 44566788999999999999854347999999999999999899999999998743
No 441
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.61 E-value=6.5e-17 Score=168.05 Aligned_cols=166 Identities=30% Similarity=0.479 Sum_probs=120.8
Q ss_pred CCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhc
Q 042348 73 IPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQC 152 (686)
Q Consensus 73 ~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 152 (686)
+|+++..|.+|..+|||.|.+. .+|..+.++++|+.|+||+|+|+ .+....+...+|++|+||.|+|+ .+|..++.|
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred CCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 6677777777777777777776 67777777777777777777776 55556666677777777777777 677777777
Q ss_pred cccccccccccccC-CCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCcccccccc
Q 042348 153 KRLKTVVLNQNSFT-GPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALL 231 (686)
Q Consensus 153 ~~L~~L~L~~N~l~-~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~ 231 (686)
++|+.|.+.+|+|+ ..||++++ .|.+|+.+..++|.|. .+|+.+..|..|+.| .|++|+|-..+....-+.
T Consensus 291 ~kL~kLy~n~NkL~FeGiPSGIG-KL~~Levf~aanN~LE-lVPEglcRC~kL~kL------~L~~NrLiTLPeaIHlL~ 362 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFEGIPSGIG-KLIQLEVFHAANNKLE-LVPEGLCRCVKLQKL------KLDHNRLITLPEAIHLLP 362 (1255)
T ss_pred HHHHHHHhccCcccccCCccchh-hhhhhHHHHhhccccc-cCchhhhhhHHHHHh------cccccceeechhhhhhcC
Confidence 77777777777765 23677774 6777777777777777 667777777777766 899999986544333455
Q ss_pred cCCcccccCCCCCCCCCC
Q 042348 232 SLGPTAFIGNPFLCGPPL 249 (686)
Q Consensus 232 ~~~~~~~~~n~~~c~~p~ 249 (686)
.+..+++..||.+.-||-
T Consensus 363 ~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 363 DLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred CcceeeccCCcCccCCCC
Confidence 677788889988865553
No 442
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=7.9e-17 Score=178.49 Aligned_cols=248 Identities=23% Similarity=0.290 Sum_probs=183.0
Q ss_pred ccCccCceEEEEEEeCC--CceEEEEEcCCCC--ccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALNN--EEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
-||+|+|+.|-...... ...+|+|.+.... ....++...|..+-+.+. |+|++++++.....+..+++++|..++
T Consensus 27 ~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~ 106 (601)
T KOG0590|consen 27 SIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGG 106 (601)
T ss_pred cccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCccccc
Confidence 38999999998876533 4556777665442 222344556888888886 999999999999999999999999999
Q ss_pred CHHHHh-hcCCCccccCCCCHHHHHHHHHHHHHHHHHHH-ccCCCCceecCCCCCCeeecCCC-CeEEeecCcccccccc
Q 042348 449 SLATAI-HGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH-EVSPKRYVHGDLRPSNILLGKNM-EPHISDFGLARLADIA 525 (686)
Q Consensus 449 sL~~~l-~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH-~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~ 525 (686)
++.+.+ +... ...+......++.|+..++.|+| . .++.||||||+|.+++..+ ..+++|||+|..+...
T Consensus 107 ~~f~~i~~~~~-----~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 107 SLFSKISHPDS-----TGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccccccccCCc-----cCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 999988 4332 13556677889999999999999 7 8999999999999999999 9999999999866541
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCC-CccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTS-RSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.... .......| +..|+|||...+. ...+..|+||.|+++.-+++|..|+........
T Consensus 179 ~g~~--------------------~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~ 238 (601)
T KOG0590|consen 179 NGAE--------------------RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG 238 (601)
T ss_pred CCcc--------------------eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc
Confidence 1100 12234455 7889999998874 457889999999999999999999966555444
Q ss_pred hHHHHHHHHHh-hcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042348 604 NIVQWIQLILE-DRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663 (686)
Q Consensus 604 ~~~~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 663 (686)
....|...... ...++ ..-.....++..+++..+|+.|.+.+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 239 RYSSWKSNKGRFTQLPW--------------NSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cceeecccccccccCcc--------------ccCChhhhhcccccccCCchhccccccccc
Confidence 33333322100 00000 111224567788899999999999888754
No 443
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.59 E-value=1.1e-16 Score=166.44 Aligned_cols=155 Identities=32% Similarity=0.456 Sum_probs=137.0
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCC-CCcccccCCCCCCEEe
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSG-PVPMQIGKLKYLQVLD 135 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ 135 (686)
.+++.|.|...+|. .+|..++.|.+|++|.+++|++. .+-.++..|+.|+.+++.+|+|.. -||..+..|..|++||
T Consensus 32 t~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lD 109 (1255)
T KOG0444|consen 32 TQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILD 109 (1255)
T ss_pred hheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeee
Confidence 57888999888887 68999999999999999999998 788899999999999999999874 4888899999999999
Q ss_pred ccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccc
Q 042348 136 LSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDL 215 (686)
Q Consensus 136 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l 215 (686)
||+|+|. ..|..+..-+++.+|+||+|++. .||..++.+|+-|-.||||+|+|... |..+..|..|+.| +|
T Consensus 110 LShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~L-PPQ~RRL~~LqtL------~L 180 (1255)
T KOG0444|consen 110 LSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEML-PPQIRRLSMLQTL------KL 180 (1255)
T ss_pred cchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhhc-CHHHHHHhhhhhh------hc
Confidence 9999999 79999999999999999999998 79999888999999999999999965 5566777777665 89
Q ss_pred cCCCCCC
Q 042348 216 TYNNLSG 222 (686)
Q Consensus 216 ~~N~l~~ 222 (686)
|+|.|..
T Consensus 181 s~NPL~h 187 (1255)
T KOG0444|consen 181 SNNPLNH 187 (1255)
T ss_pred CCChhhH
Confidence 9998753
No 444
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.58 E-value=1.1e-14 Score=139.66 Aligned_cols=135 Identities=19% Similarity=0.214 Sum_probs=97.5
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCcc--chHH----------------------HHHHHHHHhccCCCC--cc
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ--RFKE----------------------FQTEAEAIGKIRHPN--IV 426 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~H~n--Iv 426 (686)
..||+|+||.||+|...+++.||||++...... .... ...|.+.+.++.+.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 469999999999999888999999987643211 1111 135666666664433 44
Q ss_pred eeeEEEEecCceeEEEeccCCCCHHHH-hhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee
Q 042348 427 SLRAYFWSVDEKLLIYDYIPNGSLATA-IHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL 505 (686)
Q Consensus 427 ~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl 505 (686)
+.+++ ...++||||++++++... +... ... .+...++.+++.++.++|.. .+|+||||||+||++
T Consensus 83 ~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-------~~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili 148 (187)
T cd05119 83 KPIDL----NRHVLVMEFIGGDGIPAPRLKDV-------RLL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILV 148 (187)
T ss_pred ceEec----CCCEEEEEEeCCCCccChhhhhh-------hhc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEE
Confidence 45443 346899999998654321 1111 011 56788999999999999973 579999999999999
Q ss_pred cCCCCeEEeecCccccc
Q 042348 506 GKNMEPHISDFGLARLA 522 (686)
Q Consensus 506 ~~~~~~kl~DfGla~~~ 522 (686)
+ ++.++++|||.+...
T Consensus 149 ~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 149 D-DGKVYIIDVPQAVEI 164 (187)
T ss_pred E-CCcEEEEECcccccc
Confidence 9 899999999999744
No 445
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.56 E-value=4e-16 Score=169.84 Aligned_cols=184 Identities=30% Similarity=0.413 Sum_probs=141.3
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
+..+++++++.|++++ +|.+++.+.+|+.|+..+|+|. .+|.++...++|+.|...+|.++ .+|+...++++|++||
T Consensus 240 p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLD 316 (1081)
T ss_pred cccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeee
Confidence 4578889999999996 5699999999999999999986 67766666666666666666665 5565566666666666
Q ss_pred ccCCCCC-------------------------------------------------CCCChhhhhccccccccccccccC
Q 042348 136 LSQNSFS-------------------------------------------------SSIPSSIVQCKRLKTVVLNQNSFT 166 (686)
Q Consensus 136 ls~N~l~-------------------------------------------------~~~p~~~~~l~~L~~L~L~~N~l~ 166 (686)
|..|+|. ...-+.+.+..+|+.|+|++|+|.
T Consensus 317 L~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~ 396 (1081)
T KOG0618|consen 317 LQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN 396 (1081)
T ss_pred ehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc
Confidence 6666665 222223445568899999999998
Q ss_pred CCCchhhhhcCcccceecccccccCCCCchhhhcccccccc----------------cccccccccCCCCCC-Ccccccc
Q 042348 167 GPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL----------------AQRVYVDLTYNNLSG-LIPQNAA 229 (686)
Q Consensus 167 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l----------------~~~~~l~l~~N~l~~-~~p~~~~ 229 (686)
.+|+....+|..|++|+||+|+|+. +|..+.++..|++| +++.++|+|+|+|+. .+|....
T Consensus 397 -~fpas~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~~fPe~~~l~qL~~lDlS~N~L~~~~l~~~~p 474 (1081)
T KOG0618|consen 397 -SFPASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLLSFPELAQLPQLKVLDLSCNNLSEVTLPEALP 474 (1081)
T ss_pred -cCCHHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCceeechhhhhcCcceEEecccchhhhhhhhhhCC
Confidence 7899888899999999999999995 67888888887654 467789999999984 4555555
Q ss_pred cccCCcccccCCCCC
Q 042348 230 LLSLGPTAFIGNPFL 244 (686)
Q Consensus 230 ~~~~~~~~~~~n~~~ 244 (686)
..++..+++.||.++
T Consensus 475 ~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 475 SPNLKYLDLSGNTRL 489 (1081)
T ss_pred CcccceeeccCCccc
Confidence 577888899999974
No 446
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.50 E-value=1.5e-15 Score=150.87 Aligned_cols=152 Identities=32% Similarity=0.461 Sum_probs=132.9
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCE-EEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGR-VNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~-L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
-|+.++++.|+|. .+|..+..+..+.+ +.+++|.++ .+|..++.+++|..|+|++|-+. .+|..++.+..|+.||+
T Consensus 389 ~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~Lnl 465 (565)
T KOG0472|consen 389 IVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNL 465 (565)
T ss_pred ceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecc
Confidence 3889999999998 68988888877644 567777776 89999999999999999999998 89999999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
|.|+|. .+|..+..+..|+.+-.++|++...-|+.+ .++.+|.+|||.+|.+. .||..+++|.+|+.| +++
T Consensus 466 S~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l-~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hL------eL~ 536 (565)
T KOG0472|consen 466 SFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGL-KNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHL------ELD 536 (565)
T ss_pred cccccc-cchHHHhhHHHHHHHHhccccccccChHHh-hhhhhcceeccCCCchh-hCChhhccccceeEE------Eec
Confidence 999998 899999888889988888899984444445 58999999999999999 578899999999877 999
Q ss_pred CCCCC
Q 042348 217 YNNLS 221 (686)
Q Consensus 217 ~N~l~ 221 (686)
+|.|+
T Consensus 537 gNpfr 541 (565)
T KOG0472|consen 537 GNPFR 541 (565)
T ss_pred CCccC
Confidence 99999
No 447
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.49 E-value=1.3e-13 Score=148.48 Aligned_cols=140 Identities=22% Similarity=0.313 Sum_probs=101.1
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccch----------------------------------------HHHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRF----------------------------------------KEFQT 412 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~ 412 (686)
.-||.|++|.||+|++.+|+.||||+.+....... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 35999999999999999999999999865321100 12555
Q ss_pred HHHHHhccC----CCCcceeeEEEE-ecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHH-HHHHHH
Q 042348 413 EAEAIGKIR----HPNIVSLRAYFW-SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAK-GIAFLH 486 (686)
Q Consensus 413 E~~~l~~l~----H~nIv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~-gL~~LH 486 (686)
|++.+.++. |.+-+.+-.++. .....++||||++|++|.++..... ... .+.+++..++. .+..+|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-----~~~---~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-----AGL---DRKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-----cCC---CHHHHHHHHHHHHHHHHH
Confidence 666666652 322233333332 2345799999999999998765321 112 24556776666 467889
Q ss_pred ccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 487 EVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 487 ~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
. .|++|+|+||.||++++++.++++|||++..+.
T Consensus 275 ~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 R---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred h---CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8 899999999999999999999999999998665
No 448
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=6.3e-14 Score=136.16 Aligned_cols=211 Identities=19% Similarity=0.293 Sum_probs=141.0
Q ss_pred HHHhccCCCCcceeeEEEEecC-----ceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC
Q 042348 415 EAIGKIRHPNIVSLRAYFWSVD-----EKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS 489 (686)
Q Consensus 415 ~~l~~l~H~nIv~l~~~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~ 489 (686)
.-+-++.|.|||+++.|+.+.+ ...++.|||..|++..+|++.... ...+......+|+-||..||.|||++.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~--~~a~~~~~wkkw~tqIlsal~yLhs~~ 196 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN--QKALFQKAWKKWCTQILSALSYLHSCD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh--hhhhhHHHHHHHHHHHHhhhhhhhccC
Confidence 4455668999999999987654 358899999999999999865432 256778888999999999999999988
Q ss_pred CCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC
Q 042348 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV 569 (686)
Q Consensus 490 ~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 569 (686)
| +|+|+++.-+-|++..++-+|+.----........ .+. ........+-.+|.|||+-..
T Consensus 197 P-piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~----------~~~---------~~Ek~~~~~~~g~~a~~sg~~ 256 (458)
T KOG1266|consen 197 P-PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVN----------STR---------EAEKSVNTSLPGFSAPESGTT 256 (458)
T ss_pred C-ccccCCcchhheeecCCceEEecccCccccchhhh----------hhh---------HhhhhccccCCccccCCcCcc
Confidence 4 89999999999999988877765321111000000 000 001112234567999998877
Q ss_pred CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccc
Q 042348 570 RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649 (686)
Q Consensus 570 ~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~ 649 (686)
...+.++|||+||...+||..+..--....+ ......-+...... .-+ ... ..++.+|++
T Consensus 257 tn~~~a~dIy~fgmcAlemailEiq~tnseS-~~~~ee~ia~~i~~------len-----~lq--------r~~i~kcl~ 316 (458)
T KOG1266|consen 257 TNTTGASDIYKFGMCALEMAILEIQSTNSES-KVEVEENIANVIIG------LEN-----GLQ--------RGSITKCLE 316 (458)
T ss_pred cccccchhhhhhhHHHHHHHHheeccCCCcc-eeehhhhhhhheee------ccC-----ccc--------cCcCccccc
Confidence 7788899999999999999987753211111 10011111111110 000 000 145668999
Q ss_pred cCCCCCCCHHHHHHHHhc
Q 042348 650 KSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 650 ~dP~~RPs~~ev~~~L~~ 667 (686)
..|..||+|++++.|.-.
T Consensus 317 ~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 317 GEPNGRPDARLLLFHPLL 334 (458)
T ss_pred CCCCCCcchhhhhcCcee
Confidence 999999999999877543
No 449
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=4.5e-13 Score=141.76 Aligned_cols=248 Identities=19% Similarity=0.176 Sum_probs=173.7
Q ss_pred hhcccCc--cCceEEEEEEe---CCCceEEEEEcCC--CCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEE
Q 042348 371 SAFLLGK--STIGIVYKVAL---NNEEAVAVRRLGN--GGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 371 ~~~~iG~--G~~g~Vy~~~~---~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 442 (686)
....+|. |.+|.||.+.. .++..+|+|+-+. .......+-.+|+...+++ .|+|.++.+..+...+..++-+
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqt 197 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQT 197 (524)
T ss_pred cccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeee
Confidence 3456899 99999999876 3577889988433 2223334456777777777 5999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHH----HHHHHHccCCCCceecCCCCCCeeecCC-CCeEEeecC
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAK----GIAFLHEVSPKRYVHGDLRPSNILLGKN-MEPHISDFG 517 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~----gL~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfG 517 (686)
|++. .+|..+.+... ..++....+.+..+... ||.++|+ .+++|-|+||.||+...+ ..+++.|||
T Consensus 198 E~~~-~sl~~~~~~~~-----~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 198 ELCG-ESLQSYCHTPC-----NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred cccc-chhHHhhhccc-----ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcc
Confidence 9995 78888887654 34666777788888888 9999999 899999999999999999 889999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
+...+....-.... .......+..-|++||...+ -++.+.|+||+|.+..+..++..+...
T Consensus 269 ~v~~i~~~~~~~~~------------------~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 269 LVSKISDGNFSSVF------------------KVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred eeEEccCCccccce------------------eeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccC
Confidence 98877644321110 00111133445999998864 568899999999999999998776532
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 663 (686)
..... |.+. +....-.+.++. -..++...+..|++.+|-.|++.+.+..
T Consensus 330 g~~~~-----W~~~--r~~~ip~e~~~~----------~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 330 GKNSS-----WSQL--RQGYIPLEFCEG----------GSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred CCCCC-----cccc--ccccCchhhhcC----------cchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 21111 1100 000000011100 0112334777899999999998776543
No 450
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.37 E-value=1.7e-14 Score=149.44 Aligned_cols=148 Identities=32% Similarity=0.515 Sum_probs=100.7
Q ss_pred EEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCC
Q 042348 62 LIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSF 141 (686)
Q Consensus 62 l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 141 (686)
+.|..|.+. .+|..+.+|..|+.|||+.|+++ .+|..++.|+ |+.|.+++|+++ .+|+.++.+..|..||.+.|.+
T Consensus 103 liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei 178 (722)
T KOG0532|consen 103 LILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEI 178 (722)
T ss_pred HHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhh
Confidence 444455555 46667777777777777777776 6777777766 777777777775 6777777777777777777777
Q ss_pred CCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCC
Q 042348 142 SSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLS 221 (686)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~ 221 (686)
. .+|..++.+.+|+.|.+..|++. .+|.+.. .| .|..||+|+|+++ .||-.|.+|+.|+.| -|.+|-|+
T Consensus 179 ~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l------~LenNPLq 247 (722)
T KOG0532|consen 179 Q-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVL------QLENNPLQ 247 (722)
T ss_pred h-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CC-ceeeeecccCcee-ecchhhhhhhhheee------eeccCCCC
Confidence 6 56777777777777777777776 5666664 33 4677777777777 457777777666654 67777776
Q ss_pred CCc
Q 042348 222 GLI 224 (686)
Q Consensus 222 ~~~ 224 (686)
..+
T Consensus 248 SPP 250 (722)
T KOG0532|consen 248 SPP 250 (722)
T ss_pred CCh
Confidence 543
No 451
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.37 E-value=8.8e-13 Score=148.35 Aligned_cols=159 Identities=27% Similarity=0.329 Sum_probs=92.4
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCc---cccC-------------C-CCCcEEEccCCCCCCC
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPV---ELFN-------------A-SNLQSLILSGNSFSGP 120 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~---~~~~-------------l-~~L~~L~L~~N~l~g~ 120 (686)
.++.|+|++|+|+. +|.. +++|+.|+|++|+|++ +|. .+.. + .+|+.|+|++|+|+ .
T Consensus 283 ~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls-~ 356 (788)
T PRK15387 283 GLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA-S 356 (788)
T ss_pred hcCEEECcCCcccc-cccc---ccccceeECCCCcccc-CCCCcccccccccccCccccccccccccceEecCCCccC-C
Confidence 34556666666663 3432 3556666666666663 222 1111 1 36778888888887 4
Q ss_pred CcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhc
Q 042348 121 VPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIAN 200 (686)
Q Consensus 121 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 200 (686)
+|.. ..+|+.|++++|.|+ .+|.. ..+|+.|+|++|+|+ .+|.. .++|+.|+|++|+|++ +|..+.
T Consensus 357 LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt-~LP~l----~s~L~~LdLS~N~Lss-IP~l~~- 422 (788)
T PRK15387 357 LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLT-SLPVL----PSELKELMVSGNRLTS-LPMLPS- 422 (788)
T ss_pred CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCccc-CCCCc----ccCCCEEEccCCcCCC-CCcchh-
Confidence 5543 245666777777777 35543 246777777777777 35542 3567777777777775 454332
Q ss_pred ccccccccccccccccCCCCCCCcccccccccCCcccccCCCCC
Q 042348 201 LSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 201 l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
+|+ +|++++|+|+.++.....+..+..+.+.+|++.
T Consensus 423 --~L~------~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls 458 (788)
T PRK15387 423 --GLL------SLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS 458 (788)
T ss_pred --hhh------hhhhccCcccccChHHhhccCCCeEECCCCCCC
Confidence 222 347777777743323334455556666777654
No 452
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.34 E-value=3.5e-12 Score=144.46 Aligned_cols=146 Identities=26% Similarity=0.430 Sum_probs=106.7
Q ss_pred EecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCC
Q 042348 53 TCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQ 132 (686)
Q Consensus 53 ~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 132 (686)
.|.....+.|+|++++|+. +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+
T Consensus 174 ~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~ 244 (754)
T PRK15370 174 DCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQ 244 (754)
T ss_pred hhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--cccc
Confidence 3555677889999999885 676664 57889999999998 6776654 58999999999988 5676553 4788
Q ss_pred EEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccc
Q 042348 133 VLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVY 212 (686)
Q Consensus 133 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~ 212 (686)
.|+|++|+++ .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |..+. ++|. .
T Consensus 245 ~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~---~sL~~L~Ls~N~Lt~L-P~~lp--~sL~------~ 308 (754)
T PRK15370 245 EMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP---EELRYLSVYDNSIRTL-PAHLP--SGIT------H 308 (754)
T ss_pred EEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC---CCCcEEECCCCccccC-cccch--hhHH------H
Confidence 8999999888 6777664 57888899988888 5776553 5788888888888864 43332 1232 3
Q ss_pred ccccCCCCCCC
Q 042348 213 VDLTYNNLSGL 223 (686)
Q Consensus 213 l~l~~N~l~~~ 223 (686)
|++++|+|+..
T Consensus 309 L~Ls~N~Lt~L 319 (754)
T PRK15370 309 LNVQSNSLTAL 319 (754)
T ss_pred HHhcCCccccC
Confidence 36666666653
No 453
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.34 E-value=1.2e-12 Score=148.20 Aligned_cols=119 Identities=28% Similarity=0.440 Sum_probs=80.7
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..+..|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++
T Consensus 241 ~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~L 311 (754)
T PRK15370 241 DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNV 311 (754)
T ss_pred ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHh
Confidence 36788999999998 5777664 57999999999998 6787664 58999999999998 4565443 35666666
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccC
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLS 191 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 191 (686)
++|+|++ +|..+. ++|+.|++++|.|++ +|..+ .++|+.|+|++|+|+
T Consensus 312 s~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l---~~sL~~L~Ls~N~L~ 359 (754)
T PRK15370 312 QSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASL---PPELQVLDVSKNQIT 359 (754)
T ss_pred cCCcccc-CCcccc--ccceeccccCCcccc-CChhh---cCcccEEECCCCCCC
Confidence 6666663 444332 456666666666653 55443 245666666666665
No 454
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.34 E-value=2.5e-12 Score=144.69 Aligned_cols=161 Identities=28% Similarity=0.342 Sum_probs=107.0
Q ss_pred CCCEEEEEeCCCCccccC--CcCcCC--------------CCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCC
Q 042348 56 EGQVFSLIIPNKKLTGFI--PADLGS--------------LSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSG 119 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~--p~~l~~--------------l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 119 (686)
...+++|+|++|+|+... |..+.. .++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|++
T Consensus 241 p~~Lk~LdLs~N~LtsLP~lp~sL~~L~Ls~N~L~~Lp~lp~~L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~~ 316 (788)
T PRK15387 241 PPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLAS 316 (788)
T ss_pred CCCCcEEEecCCccCcccCcccccceeeccCCchhhhhhchhhcCEEECcCCccc-cccc---cccccceeECCCCcccc
Confidence 367777788877776653 222221 245778899999998 5665 34789999999999985
Q ss_pred CCcc---cccC----------C----CCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccce
Q 042348 120 PVPM---QIGK----------L----KYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQK 182 (686)
Q Consensus 120 ~~p~---~~~~----------l----~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~ 182 (686)
+|. .+.. + .+|+.|+|++|+|++ +|.. ..+|+.|++++|+|+ .+|.. ..+|+.
T Consensus 317 -Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l----~~~L~~ 386 (788)
T PRK15387 317 -LPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL----PSGLKE 386 (788)
T ss_pred -CCCCcccccccccccCccccccccccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc----ccccce
Confidence 443 2111 1 368888888888884 5643 356778888888888 46752 357899
Q ss_pred ecccccccCCCCchhhhcccccccccccccccccCCCCCCCcccccccccCCcccccCCCC
Q 042348 183 LDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPF 243 (686)
Q Consensus 183 L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 243 (686)
|+|++|+|++ +|... ++| ..|++++|+|++. |... .++..+.+.+|..
T Consensus 387 LdLs~N~Lt~-LP~l~---s~L------~~LdLS~N~LssI-P~l~--~~L~~L~Ls~NqL 434 (788)
T PRK15387 387 LIVSGNRLTS-LPVLP---SEL------KELMVSGNRLTSL-PMLP--SGLLSLSVYRNQL 434 (788)
T ss_pred EEecCCcccC-CCCcc---cCC------CEEEccCCcCCCC-Ccch--hhhhhhhhccCcc
Confidence 9999999996 45433 233 3459999999974 5432 2333445555553
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.33 E-value=1.2e-13 Score=143.18 Aligned_cols=172 Identities=24% Similarity=0.366 Sum_probs=151.0
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEecc
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLS 137 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 137 (686)
..+..+|+.|++. .+|..+..+..|+.|.|..|.|. .+|..+.++..|++|||+.|+++ .+|..++.|+ |+.|-++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 3466899999999 68999999999999999999998 89999999999999999999998 8999999988 9999999
Q ss_pred CCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccC
Q 042348 138 QNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTY 217 (686)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~ 217 (686)
+|+++ .+|..++.+..|..|+.+.|.+. .+|..++ +|.+|+.|++..|++... |.++..|+ |..||+|+
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~-~l~slr~l~vrRn~l~~l-p~El~~Lp-------Li~lDfSc 220 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLG-YLTSLRDLNVRRNHLEDL-PEELCSLP-------LIRLDFSC 220 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhh-hHHHHHHHHHhhhhhhhC-CHHHhCCc-------eeeeeccc
Confidence 99999 79999999999999999999998 6888885 899999999999999965 55665554 34569999
Q ss_pred CCCCCCcccccccccCCcccccCCCCC
Q 042348 218 NNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 218 N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
|+++.++-....+..+..+.+++||..
T Consensus 221 Nkis~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 221 NKISYLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred CceeecchhhhhhhhheeeeeccCCCC
Confidence 999975545555677888889999875
No 456
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.32 E-value=1.1e-11 Score=116.63 Aligned_cols=128 Identities=24% Similarity=0.250 Sum_probs=95.5
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcc-eeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIV-SLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
.++.|.++.||++... +..|++|....... ....+..|+.++..+.+.+++ +++.+. ....++||||+++.++.+
T Consensus 5 ~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 5 PLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT 80 (170)
T ss_pred ecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence 4789999999999876 67899998765432 224568899999998665544 455443 344689999999987764
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC--CCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS--PKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
.- . ....++.+++++|+.||+.. +.+++|+|++|.||+++ ++.++++|||.+.
T Consensus 81 ~~-----------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 81 ED-----------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cc-----------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 30 0 11345789999999999832 22369999999999999 6689999999886
No 457
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.32 E-value=5e-12 Score=137.55 Aligned_cols=141 Identities=16% Similarity=0.249 Sum_probs=92.7
Q ss_pred ccCccCceEEEEEEeCC-CceEEEEEcCCCCcc---------------------------------c-h------HHHHH
Q 042348 374 LLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQ---------------------------------R-F------KEFQT 412 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---------------------------------~-~------~~~~~ 412 (686)
-||+|++|.||+|++.+ |+.||||+.+..-.. + . -+|.+
T Consensus 126 PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~ 205 (537)
T PRK04750 126 PLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMR 205 (537)
T ss_pred hhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHH
Confidence 59999999999999987 999999998753110 0 0 12445
Q ss_pred HHHHHhccC----CCCcceeeEEEEe-cCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHc
Q 042348 413 EAEAIGKIR----HPNIVSLRAYFWS-VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487 (686)
Q Consensus 413 E~~~l~~l~----H~nIv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~ 487 (686)
|+..+.+++ +.+.+.+-.++++ ....++||||++|+.+.++-.-.........+....+..++.|+ +.
T Consensus 206 Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~ 278 (537)
T PRK04750 206 EAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FR 278 (537)
T ss_pred HHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------Hh
Confidence 555555552 4444444444443 35678999999999998753211100000112222233333343 34
Q ss_pred cCCCCceecCCCCCCeeecCCC----CeEEeecCccccccc
Q 042348 488 VSPKRYVHGDLRPSNILLGKNM----EPHISDFGLARLADI 524 (686)
Q Consensus 488 ~~~~~iiHrDlkp~NILl~~~~----~~kl~DfGla~~~~~ 524 (686)
.|++|+|+||.||+++.++ .+++.|||++..++.
T Consensus 279 ---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 279 ---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 7899999999999999888 999999999987754
No 458
>PLN03150 hypothetical protein; Provisional
Probab=99.25 E-value=8.7e-12 Score=140.63 Aligned_cols=119 Identities=34% Similarity=0.539 Sum_probs=103.7
Q ss_pred CCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecc
Q 042348 106 NLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDL 185 (686)
Q Consensus 106 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L 185 (686)
.++.|+|++|.++|.+|..++.|++|+.|+|++|.|+|.+|..+..+++|+.|+|++|+|+|.+|..+. +|++|+.|||
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~-~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLG-QLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHh-cCCCCCEEEC
Confidence 478999999999999999999999999999999999999999999999999999999999999999885 8999999999
Q ss_pred cccccCCCCchhhhcccccccccccccccccCCCCCCCcccccccccCCcccccCCCCCCCCCCCCCC
Q 042348 186 SFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGPPLKVSC 253 (686)
Q Consensus 186 s~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~~~~c 253 (686)
++|+|+|.+|..++.+. + ......+.+|+.+|+.|....|
T Consensus 498 s~N~l~g~iP~~l~~~~-~---------------------------~~~~l~~~~N~~lc~~p~l~~C 537 (623)
T PLN03150 498 NGNSLSGRVPAALGGRL-L---------------------------HRASFNFTDNAGLCGIPGLRAC 537 (623)
T ss_pred cCCcccccCChHHhhcc-c---------------------------cCceEEecCCccccCCCCCCCC
Confidence 99999999999887531 0 0112457788999987765555
No 459
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.25 E-value=6.3e-11 Score=112.00 Aligned_cols=134 Identities=13% Similarity=0.130 Sum_probs=97.5
Q ss_pred ccCccCceEEEEEEeCC-------CceEEEEEcCCCC------------c----------cchHHH----HHHHHHHhcc
Q 042348 374 LLGKSTIGIVYKVALNN-------EEAVAVRRLGNGG------------W----------QRFKEF----QTEAEAIGKI 420 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~~----~~E~~~l~~l 420 (686)
.||.|.-+.||.|...+ +..+|||..+... . ...+.+ ++|++.|.++
T Consensus 4 ~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl 83 (197)
T cd05146 4 CISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRM 83 (197)
T ss_pred ccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 58999999999997653 4789999763210 0 001223 3899999999
Q ss_pred CC--CCcceeeEEEEecCceeEEEeccCCCCHHH-HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHH-HccCCCCceec
Q 042348 421 RH--PNIVSLRAYFWSVDEKLLIYDYIPNGSLAT-AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFL-HEVSPKRYVHG 496 (686)
Q Consensus 421 ~H--~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~L-H~~~~~~iiHr 496 (686)
.. -++.+.+++ ...++||||+.++.+.. .+.. ..++..+...+..+++.+|..| |. .+|||+
T Consensus 84 ~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-------~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHG 149 (197)
T cd05146 84 QKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-------AKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHA 149 (197)
T ss_pred HHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-------cccCHHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 53 566777764 56789999997654422 1221 1244556678889999999999 78 899999
Q ss_pred CCCCCCeeecCCCCeEEeecCccccc
Q 042348 497 DLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 497 Dlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
||++.||+++ ++.++|+|||.+-..
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeC
Confidence 9999999997 468999999988643
No 460
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.25 E-value=1.3e-10 Score=124.36 Aligned_cols=168 Identities=17% Similarity=0.223 Sum_probs=124.1
Q ss_pred eCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCC
Q 042348 388 LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLS 467 (686)
Q Consensus 388 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~ 467 (686)
..++.+|.|...+...........+-++.|+.++||||+++++.+...+..|+|+|-+. .|..++.+ +.
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~---------l~ 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE---------LG 102 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH---------hH
Confidence 34577788877766544333456778899999999999999999999999999999984 57777754 33
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCcc
Q 042348 468 WSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPY 547 (686)
Q Consensus 468 ~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 547 (686)
...+...+.||+.||.|||+. .+++|++|.-+.|+++..|+.||++|-++........ +.
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------------~~----- 162 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------------PA----- 162 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------------cc-----
Confidence 455667889999999999964 4799999999999999999999999988753321110 00
Q ss_pred ccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCC
Q 042348 548 EFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593 (686)
Q Consensus 548 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~ 593 (686)
....--..|..|+.+.... ...|.|-||++++|++.|..
T Consensus 163 -----~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 163 -----KSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred -----ccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCccc
Confidence 0000011266676554322 34699999999999999943
No 461
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.23 E-value=4e-11 Score=145.13 Aligned_cols=105 Identities=28% Similarity=0.323 Sum_probs=68.4
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|+|. .+|..+..+++|+.|+|++|...+.+| .+..+++|+.|+|++|..-..+|..++.+++|+.|++
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L 688 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM 688 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeC
Confidence 46677777777776 356667777777777777665444666 3667777777777776655567777777777777777
Q ss_pred cCCCCCCCCChhhhhccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNS 164 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (686)
++|..-+.+|..+ ++++|+.|+|++|.
T Consensus 689 ~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~ 715 (1153)
T PLN03210 689 SRCENLEILPTGI-NLKSLYRLNLSGCS 715 (1153)
T ss_pred CCCCCcCccCCcC-CCCCCCEEeCCCCC
Confidence 7654333555544 45555555555543
No 462
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=2.5e-10 Score=103.82 Aligned_cols=130 Identities=25% Similarity=0.373 Sum_probs=100.5
Q ss_pred ccCccCceEEEEEEeCCCceEEEEE-cCCCC-c------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRR-LGNGG-W------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~-~~~~~-~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
++++|+-+.+|.+.+.+ ..+++|. +++.- . -...+-.+|++++.+++--.|..-+=+..+.+...++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 57899999999997754 3455653 33321 1 11345778999999997666665555677788889999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
+|-.|.+.+... ...++..+-.-+.-||. .+|||+||.++||++..+. +.++|||++.+
T Consensus 82 ~G~~lkd~l~~~-------------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA-------------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc-------------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888643 24577778888889999 9999999999999997654 99999999974
No 463
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.18 E-value=3.3e-12 Score=133.56 Aligned_cols=187 Identities=22% Similarity=0.251 Sum_probs=127.2
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCC---CCEEEccCCCCcc----cCCccccCC-CCCcEEEccCCCCCCC----Ccc
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSA---IGRVNLRNNNFSG----SLPVELFNA-SNLQSLILSGNSFSGP----VPM 123 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~---L~~L~L~~N~l~g----~~p~~~~~l-~~L~~L~L~~N~l~g~----~p~ 123 (686)
..+++.|+|++|.+.+..+..+..+.. |+.|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 358999999999998777776766666 9999999999873 234455666 8999999999999853 344
Q ss_pred cccCCCCCCEEeccCCCCCCC----CChhhhhccccccccccccccCCCCchh---hhhcCcccceecccccccCCCCch
Q 042348 124 QIGKLKYLQVLDLSQNSFSSS----IPSSIVQCKRLKTVVLNQNSFTGPLPDG---FATNLTALQKLDLSFNNLSGLIPN 196 (686)
Q Consensus 124 ~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~~l~~L~~L~Ls~N~l~~~~p~ 196 (686)
.+..++.|+.|+|++|.+++. ++..+..+++|++|+|++|.+++.-... ....+++|++|++++|.+++....
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 566778999999999999853 3344556679999999999987432222 124678899999999999864333
Q ss_pred hhhc-ccccccccccccccccCCCCC--CC--cccc-cccccCCcccccCCCCC
Q 042348 197 DIAN-LSRLRLLAQRVYVDLTYNNLS--GL--IPQN-AALLSLGPTAFIGNPFL 244 (686)
Q Consensus 197 ~~~~-l~~L~~l~~~~~l~l~~N~l~--~~--~p~~-~~~~~~~~~~~~~n~~~ 244 (686)
.+.. +.. ....+..|++++|.++ +. +... ..+.++..+.+.+|...
T Consensus 240 ~l~~~~~~--~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 240 ALASALLS--PNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHHHHhc--cCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 3332 110 1123345588888886 22 1111 12234555666666543
No 464
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.18 E-value=2e-10 Score=113.19 Aligned_cols=141 Identities=19% Similarity=0.254 Sum_probs=110.1
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCc-cchHHHHHHHHHHhccCC--CCcceeeEEEEecC---ceeEEEeccCC
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRH--PNIVSLRAYFWSVD---EKLLIYDYIPN 447 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~---~~~lV~e~~~~ 447 (686)
.|+.|..+.||++...+|..+++|....... ....++..|+++++.+.+ ..+.+++.+..... ..++||||+++
T Consensus 5 ~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G 84 (223)
T cd05154 5 QLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDG 84 (223)
T ss_pred ecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCC
Confidence 4899999999999987778899999765432 134578999999999975 44677777766542 56899999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC--------------------------------------
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS-------------------------------------- 489 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-------------------------------------- 489 (686)
.++.+.+.. ..++..++..++.+++++|++||+..
T Consensus 85 ~~l~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 85 RVLRDRLLR-------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EecCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 888776531 13677788888899999999998521
Q ss_pred ---------------CCCceecCCCCCCeeecC--CCCeEEeecCcccc
Q 042348 490 ---------------PKRYVHGDLRPSNILLGK--NMEPHISDFGLARL 521 (686)
Q Consensus 490 ---------------~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~ 521 (686)
+..++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 56689999998863
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.16 E-value=5.2e-12 Score=121.25 Aligned_cols=138 Identities=31% Similarity=0.381 Sum_probs=100.1
Q ss_pred cCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccc
Q 042348 75 ADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKR 154 (686)
Q Consensus 75 ~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 154 (686)
..+.....|+.||||+|.|+ .+..+..-+|.++.|+||+|.+. .+. .+..|++|+.||||+|.|+ .+.++-..+.+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 34455677888899999887 77777777888899999999886 443 3788888999999998888 56777778888
Q ss_pred cccccccccccCCCCchhhhhcCcccceecccccccCCCC-chhhhcccccccccccccccccCCCCCCCcc
Q 042348 155 LKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLI-PNDIANLSRLRLLAQRVYVDLTYNNLSGLIP 225 (686)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p 225 (686)
++.|.|+.|.+.. + +++ ..|.+|..||+++|++...- -..+++|+-| ..+.|.+|.+++++.
T Consensus 354 IKtL~La~N~iE~-L-SGL-~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCL------E~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 354 IKTLKLAQNKIET-L-SGL-RKLYSLVNLDLSSNQIEELDEVNHIGNLPCL------ETLRLTGNPLAGSVD 416 (490)
T ss_pred EeeeehhhhhHhh-h-hhh-HhhhhheeccccccchhhHHHhcccccccHH------HHHhhcCCCccccch
Confidence 8888888888762 2 233 36788888888888887421 1123444433 344788888877644
No 466
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.16 E-value=4.7e-12 Score=132.34 Aligned_cols=180 Identities=21% Similarity=0.217 Sum_probs=126.8
Q ss_pred CCEEEEEeCCCCcc------ccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCC---CcEEEccCCCCCC----CCcc
Q 042348 57 GQVFSLIIPNKKLT------GFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASN---LQSLILSGNSFSG----PVPM 123 (686)
Q Consensus 57 ~~~~~l~l~~n~l~------g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~---L~~L~L~~N~l~g----~~p~ 123 (686)
..++.|+++++.+. ..++..+..+++|+.|+|++|.+.+..+..+..+.+ |+.|++++|++++ .+..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 45888999888887 234566778899999999999998767766665555 9999999999983 3444
Q ss_pred cccCC-CCCCEEeccCCCCCCC----CChhhhhccccccccccccccCCC----CchhhhhcCcccceecccccccCCCC
Q 042348 124 QIGKL-KYLQVLDLSQNSFSSS----IPSSIVQCKRLKTVVLNQNSFTGP----LPDGFATNLTALQKLDLSFNNLSGLI 194 (686)
Q Consensus 124 ~~~~l-~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~~~~ 194 (686)
.+..+ ++|+.|+|++|.+++. ++..+..+.+|+.|+|++|.+++. ++..+ ..+++|+.|+|++|.+++..
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l-~~~~~L~~L~L~~n~i~~~~ 209 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGL-KANCNLEVLDLNNNGLTDEG 209 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHH-HhCCCCCEEeccCCccChHH
Confidence 56677 8999999999999853 334556677899999999999853 22223 24569999999999998553
Q ss_pred chh----hhcccccccccccccccccCCCCCCCccccc--c----cccCCcccccCCCC
Q 042348 195 PND----IANLSRLRLLAQRVYVDLTYNNLSGLIPQNA--A----LLSLGPTAFIGNPF 243 (686)
Q Consensus 195 p~~----~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~--~----~~~~~~~~~~~n~~ 243 (686)
... +..+++| .+|++++|.++....... . ...+..+.+.+|..
T Consensus 210 ~~~l~~~~~~~~~L------~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i 262 (319)
T cd00116 210 ASALAETLASLKSL------EVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDI 262 (319)
T ss_pred HHHHHHHhcccCCC------CEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCC
Confidence 332 3334444 455999999886222111 1 13455566666643
No 467
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.15 E-value=4.3e-12 Score=138.94 Aligned_cols=179 Identities=27% Similarity=0.356 Sum_probs=138.7
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+.+.|.|+...+.. .-.+|+.+++++|+++ .+|.++..+.+|+.|+..+|+|+ .+|..+....+|+.|.+
T Consensus 219 ~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSA 294 (1081)
T ss_pred cchheeeeccCcceeecccc--ccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHh
Confidence 45667777778877433322 2357899999999999 67889999999999999999996 89999999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhh------------------------------------------
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFA------------------------------------------ 174 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~------------------------------------------ 174 (686)
..|.++ -+|....++++|++|+|..|+|. .+|+.++
T Consensus 295 ~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Lt 372 (1081)
T KOG0618|consen 295 AYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLT 372 (1081)
T ss_pred hhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccc
Confidence 999999 68888888999999999999987 5565442
Q ss_pred -------hcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCcccccccccCCcccccCCCCCCCC
Q 042348 175 -------TNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGP 247 (686)
Q Consensus 175 -------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 247 (686)
.+.++|+.|+|++|+|...+...+.++..|+.| +||+|.|+..+-....+..+..+...+|..+|-|
T Consensus 373 d~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL------~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP 446 (1081)
T KOG0618|consen 373 DSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEEL------NLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP 446 (1081)
T ss_pred ccchhhhccccceeeeeecccccccCCHHHHhchHHhHHH------hcccchhhhhhHHHHhhhhhHHHhhcCCceeech
Confidence 356788999999999997766677777777665 8999999876543334444445555566666654
No 468
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.14 E-value=1.6e-10 Score=139.97 Aligned_cols=190 Identities=22% Similarity=0.257 Sum_probs=115.3
Q ss_pred eeeeEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCC
Q 042348 49 WNGITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKL 128 (686)
Q Consensus 49 w~gv~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 128 (686)
|.|+.+ -.+++.|+|+++...+.+| .++.+++|+.|+|++|.....+|..+.++++|+.|+|++|..-+.+|..+ ++
T Consensus 627 ~~~~~~-l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l 703 (1153)
T PLN03210 627 WDGVHS-LTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NL 703 (1153)
T ss_pred cccccc-CCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CC
Confidence 666532 3467788887766555666 47777888888888776656777777777788888877764434566543 44
Q ss_pred CCCCEEecc---------------------CCCCCCCCChhh------------------------------hhcccccc
Q 042348 129 KYLQVLDLS---------------------QNSFSSSIPSSI------------------------------VQCKRLKT 157 (686)
Q Consensus 129 ~~L~~L~ls---------------------~N~l~~~~p~~~------------------------------~~l~~L~~ 157 (686)
++|+.|+|+ +|.++ .+|..+ ..+++|+.
T Consensus 704 ~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~ 782 (1153)
T PLN03210 704 KSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTR 782 (1153)
T ss_pred CCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchh
Confidence 444444444 44433 233221 11246777
Q ss_pred ccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccc---------------cccccccccCCCCCC
Q 042348 158 VVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL---------------AQRVYVDLTYNNLSG 222 (686)
Q Consensus 158 L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l---------------~~~~~l~l~~N~l~~ 222 (686)
|+|++|...+.+|..+ .++++|+.|+|++|..-+.+|..+ ++++|+.| .++..|+|++|.++.
T Consensus 783 L~Ls~n~~l~~lP~si-~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~n~i~~ 860 (1153)
T PLN03210 783 LFLSDIPSLVELPSSI-QNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEE 860 (1153)
T ss_pred eeCCCCCCccccChhh-hCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccccccccCEeECCCCCCcc
Confidence 8888887777788887 488899999998875444566543 34443322 124456777777765
Q ss_pred CcccccccccCCcccccCCCCC
Q 042348 223 LIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 223 ~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
.+.....+.++..+.+.+++.+
T Consensus 861 iP~si~~l~~L~~L~L~~C~~L 882 (1153)
T PLN03210 861 VPWWIEKFSNLSFLDMNGCNNL 882 (1153)
T ss_pred ChHHHhcCCCCCEEECCCCCCc
Confidence 4333333444555555554433
No 469
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.12 E-value=5.7e-11 Score=126.02 Aligned_cols=241 Identities=20% Similarity=0.208 Sum_probs=168.1
Q ss_pred ccCccCceEEEEEEeC--CCceEEEEEcCCCCccchH--HHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN--NEEAVAVRRLGNGGWQRFK--EFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
-||.|.|+.||+...+ ++..+++|.+......... .-..|+.+...+ .|.++++++..+......++--|||+++
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~ 351 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGG 351 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCc
Confidence 4899999999997654 5678899987665332222 234566666666 5999999888888888888999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-CCeEEeecCcccccccccC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-MEPHISDFGLARLADIAEE 527 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~~~~~~~ 527 (686)
++...+.-. ..++...++++..|++.++.++|+ +.++|+|+||+||++..+ +..++.|||++..+.....
T Consensus 352 s~~l~~~~~------~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~ 422 (524)
T KOG0601|consen 352 SSSLRSVTS------QMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG 422 (524)
T ss_pred chhhhhHHH------HhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccccccceecc
Confidence 988776322 457888899999999999999999 899999999999999876 7889999998863221110
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccc-cCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYY-QAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
.....+..| .+++......+..++|+||||..+.|.+++..-- ... .
T Consensus 423 -------------------------~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls-~~~------~ 470 (524)
T KOG0601|consen 423 -------------------------VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLS-ESG------V 470 (524)
T ss_pred -------------------------cccccccccccchhhccccccccccccccccccccccccCcccC-ccc------c
Confidence 000112224 3555556667888999999999999999987432 111 0
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
+|. .+..+..+ ... .....+..+...+...++..||.+.++..+.+..+
T Consensus 471 ~~~-~i~~~~~p-------~~~------~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 471 QSL-TIRSGDTP-------NLP------GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred cce-eeeccccc-------CCC------chHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 110 00111111 010 11134556677788899999999998877766544
No 470
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.08 E-value=1.1e-10 Score=108.12 Aligned_cols=126 Identities=26% Similarity=0.286 Sum_probs=39.2
Q ss_pred cCCCCCCCEEEccCCCCcccCCcccc-CCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhh-hhccc
Q 042348 77 LGSLSAIGRVNLRNNNFSGSLPVELF-NASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSI-VQCKR 154 (686)
Q Consensus 77 l~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~l~~ 154 (686)
+.+...++.|+|++|.|+ .+. .++ .+.+|+.|+|++|.++ .++ .+..++.|+.|++++|+++ .++..+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 444556677777777776 332 344 4667777777777776 343 4666777777777777777 344444 35777
Q ss_pred cccccccccccCCCCchhhhhcCcccceecccccccCCCC---chhhhcccccccc
Q 042348 155 LKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLI---PNDIANLSRLRLL 207 (686)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~---p~~~~~l~~L~~l 207 (686)
|++|+|++|++...---.....+++|+.|+|.+|.++... .-.+..+++|+.|
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~L 145 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVL 145 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEE
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhhee
Confidence 7777777777763211122246777788888888776431 1134445555433
No 471
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.08 E-value=1.3e-09 Score=98.48 Aligned_cols=139 Identities=23% Similarity=0.297 Sum_probs=103.6
Q ss_pred ccCccCceEEEEEEeCCCceEEEE-EcCCCC-------ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVR-RLGNGG-------WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK-~~~~~~-------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
+|-+|+-+.|+++.+. |+...|| ++.+.- .-..++..+|++.+.+++--.|.--.-++.+...-.++|||+
T Consensus 14 likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~ 92 (229)
T KOG3087|consen 14 LIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFI 92 (229)
T ss_pred eeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEec
Confidence 5788999999999987 5555555 343321 112456788999999997656665555677788889999999
Q ss_pred CC-CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC---CeEEeecCccc
Q 042348 446 PN-GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM---EPHISDFGLAR 520 (686)
Q Consensus 446 ~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfGla~ 520 (686)
++ -++.+++..... ...........+.+|-..+.-||. ++|||+||..+||++..++ .+.++|||++.
T Consensus 93 ~g~~~vk~~i~~~~~----~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 93 DGASTVKDFILSTME----DESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred cchhHHHHHHHHHcc----CcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchh
Confidence 76 378888876432 112223336788999999999999 9999999999999997655 45899999985
No 472
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.08 E-value=1.1e-10 Score=125.70 Aligned_cols=173 Identities=35% Similarity=0.478 Sum_probs=116.1
Q ss_pred CEEEEEeCCCCccccCCcCcCCCC-CCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLS-AIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.++.|++.+|.++ .+|+....+. +|+.|++++|++. .+|..+.++++|+.|++++|+++ .+|...+.+++|+.|++
T Consensus 117 ~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 4677777777777 4666666664 7778888888777 66666777788888888888877 66666667777888888
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|+++ .+|..+..+..|+.|.+++|++. .++..+ .++.++..|.+++|++... +..++.+++|+. |+++
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~-~~~~~l~~l~l~~n~~~~~-~~~~~~l~~l~~------L~~s 263 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSL-SNLKNLSGLELSNNKLEDL-PESIGNLSNLET------LDLS 263 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhh-hhcccccccccCCceeeec-cchhccccccce------eccc
Confidence 888877 67766666666777777777543 344444 3667777777777777643 445555555543 4788
Q ss_pred CCCCCCCcccccccccCCcccccCCCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
+|.++-..+ .....++..+.+.+|...
T Consensus 264 ~n~i~~i~~-~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 264 NNQISSISS-LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred ccccccccc-ccccCccCEEeccCcccc
Confidence 888875544 444445555556666544
No 473
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.05 E-value=1.1e-10 Score=130.07 Aligned_cols=261 Identities=19% Similarity=0.244 Sum_probs=162.7
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
-+-+|.++.++.+.-. .|...++|..... ...+.+....+-.++-..+||-+++....+......++|++|..+++
T Consensus 811 p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~ 890 (1205)
T KOG0606|consen 811 PSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGD 890 (1205)
T ss_pred cccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCC
Confidence 4667888888876532 2222233322211 11122333344444444566777766555556678899999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|...++... ..+..-.......+..+++|||. ..++|||+||.|+++..++..++.|||............
T Consensus 891 ~~Skl~~~~------~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 891 LPSKLHNSG------CLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred chhhhhcCC------CcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccccccCcC
Confidence 999998764 24444445566778889999999 669999999999999999999999999544322110000
Q ss_pred cccccccccCCCCCCCccc---------cccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 530 EVHWEQSTTGTPLQSSPYE---------FTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
... .....|++....... ........+|..|.+||...+......+|+|+.|++++|.++|..||.....
T Consensus 962 ~~s-g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 962 DLS-GPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred Ccc-cccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence 000 001111111111100 1123356789999999999999889999999999999999999999954433
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR 659 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 659 (686)
.. .++.+.....+++.. ......+..+++.+.+..+|.+|-.|.
T Consensus 1041 q~-----~f~ni~~~~~~~p~g----------~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1041 QQ-----IFENILNRDIPWPEG----------PEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hh-----hhhccccCCCCCCCC----------ccccChhhhhhhhhhhccCchhccCcc
Confidence 22 123333332222211 111223455677777888999997665
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=1.2e-10 Score=107.93 Aligned_cols=122 Identities=33% Similarity=0.466 Sum_probs=41.0
Q ss_pred ccCCCCcccCCccccCCCCCcEEEccCCCCCCCCccccc-CCCCCCEEeccCCCCCCCCChhhhhccccccccccccccC
Q 042348 88 LRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIG-KLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFT 166 (686)
Q Consensus 88 L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 166 (686)
|..|.|. .+| .+.+..+++.|+|++|.|+ .|. .++ .+.+|+.||||+|.++ .++ .+..+++|+.|+|++|+++
T Consensus 4 lt~~~i~-~~~-~~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 4 LTANMIE-QIA-QYNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ------------------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---
T ss_pred ccccccc-ccc-ccccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC
Confidence 4445554 344 3456678999999999998 453 566 5889999999999999 454 4778999999999999999
Q ss_pred CCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCC
Q 042348 167 GPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLS 221 (686)
Q Consensus 167 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~ 221 (686)
.+.+.+...+++|+.|+|++|+|... ..+..|..++.|..|++.+|.++
T Consensus 78 -~i~~~l~~~lp~L~~L~L~~N~I~~l-----~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 78 -SISEGLDKNLPNLQELYLSNNKISDL-----NELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -S-CHHHHHH-TT--EEE-TTS---SC-----CCCGGGGG-TT--EEE-TT-GGG
T ss_pred -ccccchHHhCCcCCEEECcCCcCCCh-----HHhHHHHcCCCcceeeccCCccc
Confidence 57665545689999999999999853 33444444555566677777655
No 475
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.02 E-value=1.1e-10 Score=125.74 Aligned_cols=158 Identities=37% Similarity=0.508 Sum_probs=135.5
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEecc
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLS 137 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 137 (686)
.++.|++++|.+. .+|..+..++.|+.|++++|+++ .+|...+.+++|+.|++++|+++ .+|..+..+..|+.|+++
T Consensus 141 nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhc
Confidence 7999999999999 46788999999999999999999 78877778999999999999998 888887778889999999
Q ss_pred CCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccC
Q 042348 138 QNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTY 217 (686)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~ 217 (686)
+|.+. .++..+..+.++..|.+.+|++. .++... +.+++|+.|++++|+++...+ ++.+.+|+. +++++
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~-~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~------L~~s~ 286 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESI-GNLSNLETLDLSNNQISSISS--LGSLTNLRE------LDLSG 286 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceee-eccchh-ccccccceecccccccccccc--ccccCccCE------EeccC
Confidence 99755 57788999999999999999987 334444 588999999999999996544 666666654 49999
Q ss_pred CCCCCCcccccc
Q 042348 218 NNLSGLIPQNAA 229 (686)
Q Consensus 218 N~l~~~~p~~~~ 229 (686)
|.++..+|....
T Consensus 287 n~~~~~~~~~~~ 298 (394)
T COG4886 287 NSLSNALPLIAL 298 (394)
T ss_pred ccccccchhhhc
Confidence 999988886654
No 476
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.01 E-value=5.5e-09 Score=104.66 Aligned_cols=140 Identities=17% Similarity=0.155 Sum_probs=100.5
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccc-h----------HHHHHHHHHHhccCCCC--cceeeEEEEec-----
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-F----------KEFQTEAEAIGKIRHPN--IVSLRAYFWSV----- 435 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~----------~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~----- 435 (686)
++-.-....|+++.+. |+.+.||+........ . ..+.+|.+.+.++...+ .+..+++....
T Consensus 29 ~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 3433334446677664 6789999875433211 1 14789999999885433 33456666432
Q ss_pred CceeEEEeccCCC-CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-------
Q 042348 436 DEKLLIYDYIPNG-SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK------- 507 (686)
Q Consensus 436 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~------- 507 (686)
...++|||++++- +|.+++..... ...+...+..++.+++..++-||. .||+|+|++++|||++.
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCC
Confidence 3468999999876 89999853211 234566778999999999999999 99999999999999975
Q ss_pred CCCeEEeecCcccc
Q 042348 508 NMEPHISDFGLARL 521 (686)
Q Consensus 508 ~~~~kl~DfGla~~ 521 (686)
++.+.++||+.++.
T Consensus 181 ~~~~~LIDl~r~~~ 194 (268)
T PRK15123 181 DLKLSVIDLHRAQI 194 (268)
T ss_pred CceEEEEECCcccc
Confidence 46899999998753
No 477
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.01 E-value=1.2e-10 Score=116.31 Aligned_cols=123 Identities=25% Similarity=0.242 Sum_probs=75.4
Q ss_pred CCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccC-CCCCCC
Q 042348 66 NKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQ-NSFSSS 144 (686)
Q Consensus 66 ~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~-N~l~~~ 144 (686)
+.+|+ .+|..+. .....++|..|+|+-..|.+|+.+++|+.||||+|+|+-+-|++|.+|.+|..|-+.+ |+++..
T Consensus 55 ~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l 131 (498)
T KOG4237|consen 55 GKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDL 131 (498)
T ss_pred CCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhh
Confidence 33444 3555443 3445677777777755556667777777777777777766666777776666655554 666643
Q ss_pred CChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCC
Q 042348 145 IPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSG 192 (686)
Q Consensus 145 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 192 (686)
.-..|.+|.+|+.|.+.-|++. -++...+..|++|..|.|-+|.+..
T Consensus 132 ~k~~F~gL~slqrLllNan~i~-Cir~~al~dL~~l~lLslyDn~~q~ 178 (498)
T KOG4237|consen 132 PKGAFGGLSSLQRLLLNANHIN-CIRQDALRDLPSLSLLSLYDNKIQS 178 (498)
T ss_pred hhhHhhhHHHHHHHhcChhhhc-chhHHHHHHhhhcchhcccchhhhh
Confidence 3445666666666666666666 3444444566666666666666653
No 478
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.00 E-value=2.8e-09 Score=100.54 Aligned_cols=124 Identities=24% Similarity=0.274 Sum_probs=83.8
Q ss_pred EEEEEEeCCCceEEEEEcCCCCc--------------------------cchHHHHHHHHHHhccCCC--CcceeeEEEE
Q 042348 382 IVYKVALNNEEAVAVRRLGNGGW--------------------------QRFKEFQTEAEAIGKIRHP--NIVSLRAYFW 433 (686)
Q Consensus 382 ~Vy~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l~H~--nIv~l~~~~~ 433 (686)
.||.|...++..+|||..+.... .......+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999999999999997643100 0123467899999999765 566776542
Q ss_pred ecCceeEEEeccC--CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHH-HHccCCCCceecCCCCCCeeecCCCC
Q 042348 434 SVDEKLLIYDYIP--NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF-LHEVSPKRYVHGDLRPSNILLGKNME 510 (686)
Q Consensus 434 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~-LH~~~~~~iiHrDlkp~NILl~~~~~ 510 (686)
..++||||++ |..+..+.... ++......++.+++..+.. +|. .||+|+|+.+.||+++++ .
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~ 144 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-K 144 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-C
T ss_pred ---CCEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-e
Confidence 4579999998 55554443321 2244567788888886666 568 899999999999999887 9
Q ss_pred eEEeecCcccc
Q 042348 511 PHISDFGLARL 521 (686)
Q Consensus 511 ~kl~DfGla~~ 521 (686)
+.++|||.+..
T Consensus 145 ~~iIDf~qav~ 155 (188)
T PF01163_consen 145 VYIIDFGQAVD 155 (188)
T ss_dssp EEE--GTTEEE
T ss_pred EEEEecCccee
Confidence 99999998863
No 479
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.00 E-value=4.9e-11 Score=114.69 Aligned_cols=132 Identities=24% Similarity=0.248 Sum_probs=109.5
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..+++|+|++|.++ .+..++.-++.++.|++|+|.|. .+.. +..|++|+.||||+|.++ .+-..-.+|-+.+.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 35788999999998 68888999999999999999997 4443 888999999999999998 56666678899999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCC
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLI 194 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 194 (686)
++|.+.. + ..+..+.+|..|++++|++...-.-.-.++|+.|++|.|-+|.+.+.+
T Consensus 360 a~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 360 AQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 9999873 2 457888999999999999973211111258999999999999999764
No 480
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.88 E-value=7.2e-08 Score=100.33 Aligned_cols=171 Identities=22% Similarity=0.258 Sum_probs=128.3
Q ss_pred ceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEe----cCceeEEEeccCC-CCHHHH
Q 042348 380 IGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS----VDEKLLIYDYIPN-GSLATA 453 (686)
Q Consensus 380 ~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lV~e~~~~-gsL~~~ 453 (686)
-.+.||+... +|..|++||++....+.......-++.++++.|+|||++.++|.. +...++||+|.++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 3578898754 799999999955433333334456889999999999999999873 3457899999985 577776
Q ss_pred hhcCCCc---------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 454 IHGKAGI---------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 454 l~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
-...... ......++..++.++.|+..||.++|+ .|..-+-|.|.+|+++.+.+++|+..|....+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 5432211 112457788999999999999999999 8999999999999999999999998887765542
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCC
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKL 593 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~ 593 (686)
+.. |.+.. -.+-|.=.||.+++.|.||..
T Consensus 446 d~~-------------------------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 446 DPT-------------------------------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC-------------------------------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 210 11111 235688999999999999963
No 481
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=4e-10 Score=114.09 Aligned_cols=164 Identities=20% Similarity=0.263 Sum_probs=83.9
Q ss_pred CEEEEEeCCCCccccCC--cCcCCCCCCCEEEccCCCCcccCCccc-cCCCCCcEEEccCCCCCC-CCcccccCCCCCCE
Q 042348 58 QVFSLIIPNKKLTGFIP--ADLGSLSAIGRVNLRNNNFSGSLPVEL-FNASNLQSLILSGNSFSG-PVPMQIGKLKYLQV 133 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p--~~l~~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~ 133 (686)
.++.|+|+.|-+....| .-...|++|+.|+|+.|++.-...... ..++.|+.|.|+.+.|+- .+-..+..+++|+.
T Consensus 147 ~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~ 226 (505)
T KOG3207|consen 147 NVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEV 226 (505)
T ss_pred cceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHH
Confidence 45566666665554333 223455666666666666542222111 134556666666666652 12233345666677
Q ss_pred EeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccc
Q 042348 134 LDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYV 213 (686)
Q Consensus 134 L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l 213 (686)
|+|.+|...+.--....-+..|+.|+|++|++-..-.......|+.|..|+++.+.++..--.+...+.....++.+.+|
T Consensus 227 L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L 306 (505)
T KOG3207|consen 227 LYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYL 306 (505)
T ss_pred hhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceee
Confidence 77766642222233334455677777777766532111112356666666666666654322222223333445556677
Q ss_pred cccCCCCC
Q 042348 214 DLTYNNLS 221 (686)
Q Consensus 214 ~l~~N~l~ 221 (686)
+++.|++.
T Consensus 307 ~i~~N~I~ 314 (505)
T KOG3207|consen 307 NISENNIR 314 (505)
T ss_pred ecccCccc
Confidence 77777774
No 482
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.81 E-value=3.5e-08 Score=95.39 Aligned_cols=133 Identities=21% Similarity=0.238 Sum_probs=97.5
Q ss_pred HhhcccCccCceEEEEEEeCCCceEEEEEcCCC--------------------Cc--cchHHHHHHHHHHhccCCC--Cc
Q 042348 370 ASAFLLGKSTIGIVYKVALNNEEAVAVRRLGNG--------------------GW--QRFKEFQTEAEAIGKIRHP--NI 425 (686)
Q Consensus 370 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~--------------------~~--~~~~~~~~E~~~l~~l~H~--nI 425 (686)
+.+..||-|.-+.||.|..+.|.++|||.=+.+ ++ ..+...++|.++|.++.-. .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 456789999999999999999999999942211 11 1234577899999999655 67
Q ss_pred ceeeEEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee
Q 042348 426 VSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL 505 (686)
Q Consensus 426 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl 505 (686)
.+.+++ +.-.+||||++|--|...- ++......|+..|+.-+.-.-. .||||+|+.+=||++
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV 235 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILV 235 (304)
T ss_pred CCcccc----ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEE
Confidence 776654 5668999999886665432 2233344455555555555555 799999999999999
Q ss_pred cCCCCeEEeecCccc
Q 042348 506 GKNMEPHISDFGLAR 520 (686)
Q Consensus 506 ~~~~~~kl~DfGla~ 520 (686)
++||.+.++||--+.
T Consensus 236 ~~dg~~~vIDwPQ~v 250 (304)
T COG0478 236 TEDGDIVVIDWPQAV 250 (304)
T ss_pred ecCCCEEEEeCcccc
Confidence 999999999997553
No 483
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.77 E-value=3.8e-09 Score=80.41 Aligned_cols=59 Identities=32% Similarity=0.446 Sum_probs=30.3
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCC
Q 042348 82 AIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNS 140 (686)
Q Consensus 82 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 140 (686)
+|++|+|++|+|+...+..|.++++|++|+|++|+++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555553333444555555555555555554444455555555555555554
No 484
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.76 E-value=3.5e-07 Score=92.94 Aligned_cols=263 Identities=16% Similarity=0.181 Sum_probs=154.6
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEE----E--ecC-ceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYF----W--SVD-EKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~----~--~~~-~~~lV~e~~ 445 (686)
-||+|+-+.+|-.---.+ -+-|+......... .+-+..|... .||-+-.=+.+= . +.+ ..-++|..+
T Consensus 18 ~LgqGgea~ly~l~e~~d--~VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~v 92 (637)
T COG4248 18 PLGQGGEADLYTLGEVRD--QVAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPKV 92 (637)
T ss_pred cccCCccceeeecchhhc--hhheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecccC
Confidence 489999999996432111 23355554322211 1223333333 566544311111 1 112 245677777
Q ss_pred CCC-CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 446 PNG-SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 446 ~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
++. -+..++........+....|.-.++.++.+|.+.+-||+ .|.+-+|+.++|+|+.+++.+.|.|-..-.+..
T Consensus 93 ~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~- 168 (637)
T COG4248 93 SGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA- 168 (637)
T ss_pred CCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceeecc-
Confidence 653 344444443333344668999999999999999999999 899999999999999999999999843222111
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhC-CCCcccc
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISG-KLPMIQI 598 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG-~~P~~~~ 598 (686)
+ | +.....+|...|.+||.-. +-.-+...|-|.+||++++++.| ++||.+.
T Consensus 169 n-------------g----------~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 169 N-------------G----------TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred C-------------C----------ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 0 0 1112235566799999643 33457789999999999999986 9999543
Q ss_pred Cc-------cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhcccc--CCCCCCCHHHHHHHHhccc
Q 042348 599 GS-------MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHK--SPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 599 ~~-------~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~--dP~~RPs~~ev~~~L~~i~ 669 (686)
.. .+.++.........+..+ . ..+ .............+..+..+|+.. ++.-|||++..+..|..+.
T Consensus 226 ~~~~~ap~p~E~~Ia~g~f~ya~~~~~--g-~~p-~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 226 PLISDAPNPLETDIAHGRFAYASDQRR--G-LKP-PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred cccCCCCCcchhhhhcceeeechhccC--C-CCC-CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 21 111111100000000000 0 000 001111222334566677778865 3678999999999988776
Q ss_pred ccc
Q 042348 670 IST 672 (686)
Q Consensus 670 ~~~ 672 (686)
.+.
T Consensus 302 ~~L 304 (637)
T COG4248 302 QQL 304 (637)
T ss_pred Hhh
Confidence 543
No 485
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.72 E-value=1.1e-08 Score=71.31 Aligned_cols=40 Identities=50% Similarity=1.106 Sum_probs=28.6
Q ss_pred ChhHHHHHHHHHHhccCCCCC--CCCCCCC-CCCcceeeeEec
Q 042348 16 ANDEGLALLSFKQAIRNFPEG--NNWNNSN-EDPCSWNGITCR 55 (686)
Q Consensus 16 ~~~~~~~l~~~k~~~~~~~~~--~~w~~~~-~~~c~w~gv~c~ 55 (686)
+++|+.||+.||+++..+|.. .+|+.++ .+||+|.||+|+
T Consensus 1 ~~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 1 PNQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp -HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred CcHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 367999999999999866633 7899874 799999999995
No 486
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.67 E-value=1.7e-08 Score=76.75 Aligned_cols=60 Identities=33% Similarity=0.445 Sum_probs=56.1
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCC
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSF 117 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l 117 (686)
+++.|+|++|+|+...+..|..+++|++|++++|+|+...|..|.++++|++|+|++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 678999999999987778999999999999999999988888999999999999999985
No 487
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.66 E-value=6.7e-08 Score=104.79 Aligned_cols=149 Identities=20% Similarity=0.350 Sum_probs=96.4
Q ss_pred HHHHHHHhh-cccCccCceEEEEEEeCCCceEEEEEcCCCCccc------------------------------h-----
Q 042348 364 LEQLLKASA-FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR------------------------------F----- 407 (686)
Q Consensus 364 ~~~l~~~~~-~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------------------------~----- 407 (686)
++++..... .-|+.++-|.||+|++.+|+.||||+.+.+-... .
T Consensus 121 iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~ 200 (517)
T COG0661 121 IEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEK 200 (517)
T ss_pred HHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHH
Confidence 344444433 4588999999999999999999999875431110 0
Q ss_pred -----HHHHHHHHHHhccC-----CCCcceeeEEEE-ecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHH
Q 042348 408 -----KEFQTEAEAIGKIR-----HPNIVSLRAYFW-SVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIK 476 (686)
Q Consensus 408 -----~~~~~E~~~l~~l~-----H~nIv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~ 476 (686)
-++.+|...+.+++ .++| ++=.+|+ -.....++|||++|-.+.+...-.. ..++. ..++.
T Consensus 201 ~l~~ElDy~~EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-----~g~d~---k~ia~ 271 (517)
T COG0661 201 RLREELDYRREAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-----AGIDR---KELAE 271 (517)
T ss_pred HHHHHhCHHHHHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHh-----cCCCH---HHHHH
Confidence 12445666666552 3333 2222333 2467799999999998888843222 12332 23333
Q ss_pred HHHHH-HHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 477 GVAKG-IAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 477 ~ia~g-L~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
.++++ +..+-. .|++|.|..|.||+++.++.+.+.|||+...+++
T Consensus 272 ~~~~~f~~q~~~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 272 LLVRAFLRQLLR---DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHHHHHHh---cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 33332 222222 5899999999999999999999999999876654
No 488
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.64 E-value=2.7e-07 Score=89.42 Aligned_cols=107 Identities=25% Similarity=0.303 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHhccCC--CCcceeeEEEEecC----ceeEEEeccCCC-CHHHHhhcCCCccccCCCCHHHHHHHHHHHH
Q 042348 407 FKEFQTEAEAIGKIRH--PNIVSLRAYFWSVD----EKLLIYDYIPNG-SLATAIHGKAGIISYRPLSWSDRLRIIKGVA 479 (686)
Q Consensus 407 ~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~----~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia 479 (686)
...+.+|.+.+.++.. =.+++.+++..... ..++|+|++++. +|.+++.... ..+......++.+++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~------~~~~~~~~~ll~~l~ 128 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE------QLDPSQRRELLRALA 128 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc------ccchhhHHHHHHHHH
Confidence 3467889998888853 34556677766532 348999999874 8999987632 245567789999999
Q ss_pred HHHHHHHccCCCCceecCCCCCCeeecCCC---CeEEeecCccccc
Q 042348 480 KGIAFLHEVSPKRYVHGDLRPSNILLGKNM---EPHISDFGLARLA 522 (686)
Q Consensus 480 ~gL~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfGla~~~ 522 (686)
..++-||+ .||+|+|+++.|||++.+. .+.++||+-++..
T Consensus 129 ~~i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 129 RLIAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999 9999999999999999876 8999999987643
No 489
>PRK09902 hypothetical protein; Provisional
Probab=98.63 E-value=8.8e-07 Score=84.03 Aligned_cols=138 Identities=17% Similarity=0.083 Sum_probs=103.0
Q ss_pred CccCceEEEEEEeCCCceEEEEEcCCC---C---ccchHHHHHHHHHHhccCC--CCcceeeEEEEec----CceeEEEe
Q 042348 376 GKSTIGIVYKVALNNEEAVAVRRLGNG---G---WQRFKEFQTEAEAIGKIRH--PNIVSLRAYFWSV----DEKLLIYD 443 (686)
Q Consensus 376 G~G~~g~Vy~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~----~~~~lV~e 443 (686)
|+||.+-|++..+.+. .+-+|+-... + ......|.+|+..+.++.. -.+.+.+.+.... ..-+||+|
T Consensus 27 ~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe 105 (216)
T PRK09902 27 RRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTE 105 (216)
T ss_pred CCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEE
Confidence 7889999999887644 6888987521 1 2245679999999999953 2355555222222 13489999
Q ss_pred ccCC-CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC--eEEeecCccc
Q 042348 444 YIPN-GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME--PHISDFGLAR 520 (686)
Q Consensus 444 ~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~--~kl~DfGla~ 520 (686)
-+++ -||.+++....- .+.+...+..++.+++..++-||+ .|+.|+|+-+.||+++.++. ++++||--++
T Consensus 106 ~L~g~~~L~~~l~~~~~----~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 106 DMAGFISIADWYAQHAV----SPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred eCCCCccHHHHHhcCCc----CCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 8854 589998865421 345777788999999999999999 99999999999999986666 9999998765
Q ss_pred c
Q 042348 521 L 521 (686)
Q Consensus 521 ~ 521 (686)
.
T Consensus 179 ~ 179 (216)
T PRK09902 179 R 179 (216)
T ss_pred h
Confidence 3
No 490
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.62 E-value=2.2e-09 Score=114.83 Aligned_cols=161 Identities=29% Similarity=0.349 Sum_probs=106.3
Q ss_pred CcCcCCCCCCCEEEccCCCCc---ccCC-------------------------ccccC---CCCCcEEEccCCCCCCCCc
Q 042348 74 PADLGSLSAIGRVNLRNNNFS---GSLP-------------------------VELFN---ASNLQSLILSGNSFSGPVP 122 (686)
Q Consensus 74 p~~l~~l~~L~~L~L~~N~l~---g~~p-------------------------~~~~~---l~~L~~L~L~~N~l~g~~p 122 (686)
|-.|.-+.+|++|.|.+..|+ |..+ .++.+ ...|.+.+.++|.|. .+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~mD 180 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LMD 180 (1096)
T ss_pred CceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hHH
Confidence 556777888888888887775 2111 01111 123556667777776 677
Q ss_pred ccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccc
Q 042348 123 MQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLS 202 (686)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 202 (686)
.++.-++.|+.|||++|+++. .. .+..|+.|++|||+.|+|+ .+|.--...+ .|+.|+|++|.++.. ..+.+|.
T Consensus 181 ~SLqll~ale~LnLshNk~~~-v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l~tL--~gie~Lk 254 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTK-VD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNALTTL--RGIENLK 254 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhh-hH-HHHhcccccccccccchhc-cccccchhhh-hheeeeecccHHHhh--hhHHhhh
Confidence 777778888888888888884 32 7788888888888888887 5654322233 388888888888853 2455555
Q ss_pred ccccccccccccccCCCCCCCc--ccccccccCCcccccCCCCCCCC
Q 042348 203 RLRLLAQRVYVDLTYNNLSGLI--PQNAALLSLGPTAFIGNPFLCGP 247 (686)
Q Consensus 203 ~L~~l~~~~~l~l~~N~l~~~~--p~~~~~~~~~~~~~~~n~~~c~~ 247 (686)
+|+. |||++|-|++-- -..-.+..+..+++.|||.-|.+
T Consensus 255 sL~~------LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 255 SLYG------LDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred hhhc------cchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 5554 499999887531 11122344566788899987754
No 491
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.49 E-value=5.3e-08 Score=105.10 Aligned_cols=159 Identities=20% Similarity=0.244 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccC
Q 042348 475 IKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNS 554 (686)
Q Consensus 475 ~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 554 (686)
+.++++||.|+|.. .++||++|.|++|.+++.+..||+.|+.+.........+ ...+.....--
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p--------------~~~yd~~lp~~ 168 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYP--------------FSEYDPPLPLL 168 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccc--------------cccCCCCCChh
Confidence 45566999999974 579999999999999999999999999876443211100 01111111111
Q ss_pred CCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCc
Q 042348 555 TTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDK 633 (686)
Q Consensus 555 ~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 633 (686)
......|.|||++.....+.++|+||+||++|.+.. |+.-+...+.... .-...... +....+ ..
T Consensus 169 ~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~----~~~~~~~~--------~~~~~~--~s 234 (700)
T KOG2137|consen 169 LQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS----YSFSRNLL--------NAGAFG--YS 234 (700)
T ss_pred hccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcch----hhhhhccc--------cccccc--cc
Confidence 222456999999998888999999999999999995 4443322211110 00000000 000000 01
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 042348 634 EDEIVSVLKIALDCVHKSPDKRPSMRHVCD 663 (686)
Q Consensus 634 ~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 663 (686)
...+.++.+-+.+++..++..||++.++..
T Consensus 235 ~~~p~el~~~l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 235 NNLPSELRESLKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred ccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence 123345667777889999999997776543
No 492
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.48 E-value=3e-08 Score=100.81 Aligned_cols=160 Identities=23% Similarity=0.250 Sum_probs=114.4
Q ss_pred CCCEEEEEeCCCCccccCCcC-cCCCCCCCEEEccCCCCcc-cCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCE
Q 042348 56 EGQVFSLIIPNKKLTGFIPAD-LGSLSAIGRVNLRNNNFSG-SLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQV 133 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~-l~~l~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 133 (686)
-.+++.|+|+.|+|.-..... -..++.|+.|.|+.+.|+- .+-.-+..+|+|..|+|..|..-+.-......+..|+.
T Consensus 171 Lp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~ 250 (505)
T KOG3207|consen 171 LPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQE 250 (505)
T ss_pred cccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhh
Confidence 468999999999998654443 2367899999999999971 12233456799999999999643344445566789999
Q ss_pred EeccCCCCCCCCC--hhhhhccccccccccccccCCC-Cchh----hhhcCcccceecccccccCCCCchhhhccccccc
Q 042348 134 LDLSQNSFSSSIP--SSIVQCKRLKTVVLNQNSFTGP-LPDG----FATNLTALQKLDLSFNNLSGLIPNDIANLSRLRL 206 (686)
Q Consensus 134 L~ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~-~p~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 206 (686)
|||++|++- ..+ ...+.++.|..|+++.+.++.. +|+. ....+++|++|+++.|++.. +..+.+++.
T Consensus 251 LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~-----w~sl~~l~~ 324 (505)
T KOG3207|consen 251 LDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRD-----WRSLNHLRT 324 (505)
T ss_pred ccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcccc-----ccccchhhc
Confidence 999999987 344 4567889999999999988732 2332 12468899999999999974 334455555
Q ss_pred ccccccccccCCCCC
Q 042348 207 LAQRVYVDLTYNNLS 221 (686)
Q Consensus 207 l~~~~~l~l~~N~l~ 221 (686)
++++..|....|.|+
T Consensus 325 l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 325 LENLKHLRITLNYLN 339 (505)
T ss_pred cchhhhhhccccccc
Confidence 544444455555554
No 493
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.47 E-value=2.2e-06 Score=84.18 Aligned_cols=141 Identities=17% Similarity=0.157 Sum_probs=84.6
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCC--cceeeEEEEecCceeEEEeccCCCC-H
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPN--IVSLRAYFWSVDEKLLIYDYIPNGS-L 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lV~e~~~~gs-L 450 (686)
.||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.+ +
T Consensus 8 ~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 8 QTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 5899999999984 24467788876533 2355788999999986433 4677878777777889999998863 2
Q ss_pred HHHhhcCC-----------------CccccCCCCHHHHH-HHHH----------HHHH-HHHHHHccC-CCCceecCCCC
Q 042348 451 ATAIHGKA-----------------GIISYRPLSWSDRL-RIIK----------GVAK-GIAFLHEVS-PKRYVHGDLRP 500 (686)
Q Consensus 451 ~~~l~~~~-----------------~~~~~~~l~~~~~~-~i~~----------~ia~-gL~~LH~~~-~~~iiHrDlkp 500 (686)
...+.... .............. ++-. .+.. ..++|.... ...++|+|+.|
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~ 162 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI 162 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence 21111000 00000001111100 0000 0001 122222211 23578999999
Q ss_pred CCeeecCCCCeEEeecCccc
Q 042348 501 SNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 501 ~NILl~~~~~~kl~DfGla~ 520 (686)
.||++++++ +.++||+.+.
T Consensus 163 ~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 163 GNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CcEEEcCCC-cEEEechhcC
Confidence 999999887 9999999875
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.44 E-value=3e-08 Score=85.03 Aligned_cols=133 Identities=18% Similarity=0.251 Sum_probs=89.5
Q ss_pred EEEEeCCCCccccCCc---CcCCCCCCCEEEccCCCCcccCCcccc-CCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 60 FSLIIPNKKLTGFIPA---DLGSLSAIGRVNLRNNNFSGSLPVELF-NASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 60 ~~l~l~~n~l~g~~p~---~l~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
-.++|++..|- .++. .+.....|+..+|++|.|. ..|..|. ..+.+++|+|++|.|+ .+|.++..++.|+.|+
T Consensus 30 h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 30 HFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 34555555543 2333 3444556666788888887 5666655 3457888888888887 7888888888888888
Q ss_pred ccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhh
Q 042348 136 LSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDI 198 (686)
Q Consensus 136 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 198 (686)
++.|.|. ..|..+..|.+|..|+..+|.+. +||-..+ .-..+-..+|.+|.+.+.-|..+
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~-~s~~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLF-YSSLPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHh-ccccHHHHHhcCCcccccCcccc
Confidence 8888887 67777777888888888888876 6665543 22233334566777776655443
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.44 E-value=6.1e-09 Score=111.54 Aligned_cols=126 Identities=26% Similarity=0.269 Sum_probs=76.1
Q ss_pred EEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCccc-ccCCCCCCEEecc
Q 042348 59 VFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQ-IGKLKYLQVLDLS 137 (686)
Q Consensus 59 ~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~ls 137 (686)
+...+.+.|.|+ .+..++.-|+.|+.|||++|++. ... .+..++.|++|||++|.|. .+|.. ...+. |+.|.|+
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhh-hhH-HHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 444555566666 35566666777777777777776 232 5666777777777777776 45532 22233 7777777
Q ss_pred CCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccC
Q 042348 138 QNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLS 191 (686)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 191 (686)
+|.++.. ..+.+|.+|..|||++|-|++.-.-.+...|..|..|+|.+|.+-
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7776632 235566777777777776664332222334566677777777664
No 496
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.32 E-value=1.1e-07 Score=81.72 Aligned_cols=132 Identities=23% Similarity=0.323 Sum_probs=78.1
Q ss_pred CCEEEccCCCCcccCCcccc---CCCCCcEEEccCCCCCCCCccccc-CCCCCCEEeccCCCCCCCCChhhhhccccccc
Q 042348 83 IGRVNLRNNNFSGSLPVELF---NASNLQSLILSGNSFSGPVPMQIG-KLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTV 158 (686)
Q Consensus 83 L~~L~L~~N~l~g~~p~~~~---~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 158 (686)
+..++|++.+|- .++.... ....|+..+|++|.|. .+|..|. +++.++.|+|++|.++ .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445666666663 4444433 3344555677777776 4444443 4457777777777777 577777777777777
Q ss_pred cccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCccc
Q 042348 159 VLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQ 226 (686)
Q Consensus 159 ~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~ 226 (686)
+++.|.|. ..|.-++ .|.+|-.||..+|.+.- ||-++- .+++..+ .++.+|-+.+.-+.
T Consensus 106 Nl~~N~l~-~~p~vi~-~L~~l~~Lds~~na~~e-id~dl~-~s~~~al-----~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIA-PLIKLDMLDSPENARAE-IDVDLF-YSSLPAL-----IKLGNEPLGDETKK 164 (177)
T ss_pred ccccCccc-cchHHHH-HHHhHHHhcCCCCcccc-CcHHHh-ccccHHH-----HHhcCCcccccCcc
Confidence 77777776 4555554 47777777777777663 343322 1222111 25566666654443
No 497
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.28 E-value=3.9e-07 Score=98.54 Aligned_cols=126 Identities=28% Similarity=0.298 Sum_probs=72.0
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..+..|+|.+|+|.+.. ..+..+.+|++|+|++|.|+...+ +..++.|+.|++++|.++ .+. .+..+.+|+.+++
T Consensus 95 ~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~-~~~-~~~~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLIS-DIS-GLESLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchhhcc-cchhhhhcchheeccccccccccc--hhhccchhhheeccCcch-hcc-CCccchhhhcccC
Confidence 45666777777776532 225666777777777777764333 345555777777777775 222 3445667777777
Q ss_pred cCCCCCCCCChh-hhhccccccccccccccCCCCchhhhhcCcccceecccccccC
Q 042348 137 SQNSFSSSIPSS-IVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLS 191 (686)
Q Consensus 137 s~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 191 (686)
++|.++. +... ...+.+|+.+++.+|.+.- +. .+ ..+..+..+++..|.++
T Consensus 170 ~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~~-i~-~~-~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 170 SYNRIVD-IENDELSELISLEELDLGGNSIRE-IE-GL-DLLKKLVLLSLLDNKIS 221 (414)
T ss_pred Ccchhhh-hhhhhhhhccchHHHhccCCchhc-cc-ch-HHHHHHHHhhcccccce
Confidence 7777663 3322 4566667777777776652 21 11 12333444455555554
No 498
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.24 E-value=1.2e-05 Score=80.39 Aligned_cols=75 Identities=16% Similarity=0.177 Sum_probs=54.4
Q ss_pred cCccCc-eEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 375 LGKSTI-GIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 375 iG~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
|-.|.. ..||+....+ ..+.||+..... .....+|+++++.+. +--+.+++++....+..++|||+++|.++..
T Consensus 6 ~~~g~~~~~v~~~~~~~-~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDGKN-PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcCCC-CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 334444 7899997654 678888876543 245778999988883 4446678887776667899999999987764
Q ss_pred H
Q 042348 453 A 453 (686)
Q Consensus 453 ~ 453 (686)
.
T Consensus 82 ~ 82 (244)
T cd05150 82 L 82 (244)
T ss_pred h
Confidence 4
No 499
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.21 E-value=8.7e-06 Score=88.17 Aligned_cols=141 Identities=20% Similarity=0.300 Sum_probs=89.2
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCcc-------------------------------------chHHHHHHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-------------------------------------RFKEFQTEAE 415 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------------------------~~~~~~~E~~ 415 (686)
.-||.-+.|.||+|++++|+.||||+-+.+-.. ..-+|.+|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 458999999999999999999999986543111 0012455555
Q ss_pred HHhcc----CCCCc---ceeeEEEEe-cCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHc
Q 042348 416 AIGKI----RHPNI---VSLRAYFWS-VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHE 487 (686)
Q Consensus 416 ~l~~l----~H~nI---v~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~ 487 (686)
-..++ .|-+. |.+=.++++ -..+.|+||||+|..+.|.-.-.. ..++...+ +..+.++.. +.
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~-----~gi~~~~i---~~~l~~~~~--~q 316 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK-----RGISPHDI---LNKLVEAYL--EQ 316 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH-----cCCCHHHH---HHHHHHHHH--HH
Confidence 44444 35551 112222332 356799999999987766533221 23454433 333333222 11
Q ss_pred cCCCCceecCCCCCCeeecC----CCCeEEeecCcccccc
Q 042348 488 VSPKRYVHGDLRPSNILLGK----NMEPHISDFGLARLAD 523 (686)
Q Consensus 488 ~~~~~iiHrDlkp~NILl~~----~~~~kl~DfGla~~~~ 523 (686)
.-..|.+|+|=.|.||++.. ++.+.+-|||+...+.
T Consensus 317 If~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 317 IFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred HHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 11157999999999999983 6789999999987654
No 500
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.12 E-value=2.3e-05 Score=75.42 Aligned_cols=135 Identities=20% Similarity=0.232 Sum_probs=92.1
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCcc-------------------chHH-----HHHHHHHHhccC--CCCcce
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-------------------RFKE-----FQTEAEAIGKIR--HPNIVS 427 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------~~~~-----~~~E~~~l~~l~--H~nIv~ 427 (686)
.|+.|.-+.||+|...++..+|||+++..... ..++ ..+|..-|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 47888899999999888999999987543211 0111 346777777773 444555
Q ss_pred eeEEEEecCceeEEEeccCCCC-HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec
Q 042348 428 LRAYFWSVDEKLLIYDYIPNGS-LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG 506 (686)
Q Consensus 428 l~~~~~~~~~~~lV~e~~~~gs-L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~ 506 (686)
-+++. .-.+||||+.... -.-.|. ..++...+...+..++++.+.-|-.. .++||+||..=|||+.
T Consensus 135 Pi~~~----~nVLvMEfIg~~g~pAP~Lk-------Dv~~e~~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~~ 201 (268)
T COG1718 135 PIAFR----NNVLVMEFIGDDGLPAPRLK-------DVPLELEEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILVH 201 (268)
T ss_pred ceeec----CCeEEEEeccCCCCCCCCcc-------cCCcCchhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEEE
Confidence 55443 4579999995431 111111 12233335677788888888777653 5799999999999999
Q ss_pred CCCCeEEeecCccccc
Q 042348 507 KNMEPHISDFGLARLA 522 (686)
Q Consensus 507 ~~~~~kl~DfGla~~~ 522 (686)
++.+.|+|||-|-..
T Consensus 202 -~~~p~iID~~QaV~~ 216 (268)
T COG1718 202 -DGEPYIIDVSQAVTI 216 (268)
T ss_pred -CCeEEEEECcccccc
Confidence 889999999988643
Done!