Query 042348
Match_columns 686
No_of_seqs 695 out of 4658
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 08:56:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042348.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042348hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 1.4E-54 4.9E-59 449.5 22.3 257 373-670 47-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 5.2E-55 1.8E-59 446.6 17.8 257 373-670 19-289 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 3.7E-54 1.3E-58 442.3 21.5 256 373-669 32-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 6.2E-54 2.1E-58 438.5 21.6 254 373-670 42-300 (307)
5 4fih_A Serine/threonine-protei 100.0 7.3E-53 2.5E-57 435.9 20.3 243 374-664 81-324 (346)
6 4b9d_A Serine/threonine-protei 100.0 9.5E-53 3.2E-57 435.7 20.0 245 373-664 30-277 (350)
7 4g3f_A NF-kappa-beta-inducing 100.0 4.5E-52 1.5E-56 428.8 20.8 250 373-669 64-315 (336)
8 3hmm_A TGF-beta receptor type- 100.0 2.5E-52 8.5E-57 429.8 18.9 264 373-670 9-297 (303)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.1E-52 1.4E-56 423.8 20.1 242 373-662 38-283 (311)
10 3fpq_A Serine/threonine-protei 100.0 1.3E-51 4.6E-56 418.2 22.2 241 374-664 33-283 (290)
11 4fie_A Serine/threonine-protei 100.0 1.3E-51 4.5E-56 436.9 22.0 244 373-664 157-401 (423)
12 3hyh_A Carbon catabolite-derep 100.0 2.3E-51 7.8E-56 412.8 21.9 240 373-664 19-263 (275)
13 3ubd_A Ribosomal protein S6 ki 100.0 6.1E-52 2.1E-56 422.7 17.8 261 373-685 30-303 (304)
14 4ase_A Vascular endothelial gr 100.0 8.3E-52 2.8E-56 432.2 16.8 259 372-670 69-347 (353)
15 4g31_A Eukaryotic translation 100.0 3.3E-49 1.1E-53 404.4 21.1 260 373-668 11-286 (299)
16 4b99_A Mitogen-activated prote 100.0 8.6E-47 2.9E-51 401.3 22.6 259 373-664 60-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2.3E-46 7.8E-51 393.9 20.1 213 373-599 27-251 (361)
18 3v5w_A G-protein coupled recep 100.0 1.2E-45 4.1E-50 408.2 23.9 243 373-664 195-450 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 1.9E-45 6.4E-50 410.2 21.5 246 373-664 163-411 (573)
20 2qkw_B Protein kinase; three-h 100.0 3E-44 1E-48 374.8 23.7 271 373-671 45-316 (321)
21 3uim_A Brassinosteroid insensi 100.0 1E-43 3.5E-48 371.6 20.3 271 373-669 36-310 (326)
22 3s95_A LIMK-1, LIM domain kina 100.0 2.2E-43 7.6E-48 366.3 21.1 267 373-671 16-283 (310)
23 3fe3_A MAP/microtubule affinit 100.0 5.7E-43 2E-47 365.2 22.0 241 373-664 21-265 (328)
24 1o6l_A RAC-beta serine/threoni 100.0 1.6E-42 5.6E-47 362.8 24.9 243 373-665 11-262 (337)
25 3fxz_A Serine/threonine-protei 100.0 7.8E-43 2.7E-47 359.7 22.1 244 373-664 26-270 (297)
26 3zgw_A Maternal embryonic leuc 100.0 6E-43 2.1E-47 367.2 21.2 243 373-664 16-261 (347)
27 3soc_A Activin receptor type-2 100.0 1.4E-43 4.9E-48 369.7 16.2 259 373-670 30-318 (322)
28 2c30_A Serine/threonine-protei 100.0 2.6E-42 9E-47 359.8 25.0 245 373-665 51-296 (321)
29 2nru_A Interleukin-1 receptor- 100.0 4.8E-42 1.6E-46 355.7 26.3 279 360-670 13-306 (307)
30 3p86_A Serine/threonine-protei 100.0 1.3E-42 4.3E-47 360.1 21.8 253 373-671 43-299 (309)
31 2psq_A Fibroblast growth facto 100.0 1.5E-42 5.1E-47 368.7 22.4 257 373-670 87-364 (370)
32 4hcu_A Tyrosine-protein kinase 100.0 1.9E-42 6.4E-47 351.7 21.9 250 373-670 16-266 (269)
33 3kul_A Ephrin type-A receptor 100.0 1.6E-42 5.5E-47 362.1 21.5 256 373-673 55-316 (325)
34 3sxs_A Cytoplasmic tyrosine-pr 100.0 3E-42 1E-46 349.9 22.1 251 373-671 14-265 (268)
35 1qcf_A Haematopoetic cell kina 100.0 1.5E-42 5.3E-47 379.0 20.0 257 373-677 194-451 (454)
36 4dc2_A Protein kinase C IOTA t 100.0 6.1E-42 2.1E-46 365.1 23.3 247 373-664 58-319 (396)
37 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.2E-42 7.4E-47 364.3 19.6 242 373-664 29-281 (353)
38 3q4u_A Activin receptor type-1 100.0 3.4E-42 1.2E-46 355.6 20.4 258 373-669 14-301 (301)
39 1fot_A TPK1 delta, CAMP-depend 100.0 1E-41 3.5E-46 354.2 23.9 239 373-664 12-259 (318)
40 2qol_A Ephrin receptor; recept 100.0 4.2E-42 1.4E-46 365.5 20.9 253 373-670 51-309 (373)
41 3gen_A Tyrosine-protein kinase 100.0 1.2E-41 4E-46 348.4 23.2 249 373-669 30-279 (283)
42 3a62_A Ribosomal protein S6 ki 100.0 1.8E-41 6E-46 354.5 24.3 243 373-665 23-278 (327)
43 3ugc_A Tyrosine-protein kinase 100.0 2.5E-42 8.7E-47 355.7 17.7 259 373-670 16-291 (295)
44 1xjd_A Protein kinase C, theta 100.0 4.3E-42 1.5E-46 360.6 19.4 242 373-664 23-270 (345)
45 2yab_A Death-associated protei 100.0 1.4E-41 4.9E-46 358.9 23.4 245 373-664 18-273 (361)
46 4fr4_A YANK1, serine/threonine 100.0 1.6E-41 5.6E-46 360.5 23.9 244 373-664 21-272 (384)
47 4eqm_A Protein kinase; transfe 100.0 1.3E-41 4.4E-46 350.1 22.3 256 373-672 17-277 (294)
48 3a8x_A Protein kinase C IOTA t 100.0 2.2E-41 7.7E-46 355.8 24.5 247 373-664 15-276 (345)
49 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.3E-41 4.5E-46 358.1 22.6 240 373-665 47-295 (350)
50 3cbl_A C-FES, proto-oncogene t 100.0 3E-42 1E-46 367.6 17.5 252 373-670 120-374 (377)
51 4euu_A Serine/threonine-protei 100.0 5.2E-41 1.8E-45 350.0 26.3 265 373-668 15-307 (319)
52 2i0e_A Protein kinase C-beta I 100.0 1.9E-41 6.6E-46 356.8 22.7 242 373-664 26-277 (353)
53 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.6E-42 1.6E-46 374.8 18.4 259 373-679 190-449 (452)
54 3lb7_A RAF proto-oncogene seri 100.0 2.1E-41 7.3E-46 350.6 22.3 255 373-671 42-301 (307)
55 1tki_A Titin; serine kinase, m 100.0 1.2E-41 4E-46 354.7 20.4 245 373-664 11-258 (321)
56 2x4f_A Myosin light chain kina 100.0 1.4E-41 4.9E-46 361.2 21.2 246 373-664 95-343 (373)
57 2y0a_A Death-associated protei 100.0 3.2E-41 1.1E-45 352.4 23.2 246 372-664 16-272 (326)
58 3niz_A Rhodanese family protei 100.0 2E-41 6.9E-46 351.5 21.3 258 373-664 27-301 (311)
59 3l9p_A Anaplastic lymphoma kin 100.0 6.3E-42 2.2E-46 363.6 17.6 259 373-672 77-347 (367)
60 3soa_A Calcium/calmodulin-depe 100.0 4.4E-41 1.5E-45 364.6 24.3 246 373-664 17-268 (444)
61 3poz_A Epidermal growth factor 100.0 1.2E-41 3.9E-46 356.1 18.9 252 373-671 21-279 (327)
62 2bdw_A Hypothetical protein K1 100.0 4E-41 1.4E-45 356.4 22.9 246 372-664 34-285 (362)
63 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-41 7.1E-46 369.4 21.2 245 373-670 199-445 (450)
64 3tt0_A Basic fibroblast growth 100.0 4.6E-41 1.6E-45 359.2 23.4 258 373-671 75-353 (382)
65 3vhe_A Vascular endothelial gr 100.0 8.7E-42 3E-46 362.0 17.6 259 373-671 28-356 (359)
66 3tki_A Serine/threonine-protei 100.0 5.7E-42 1.9E-46 357.5 15.8 247 373-664 13-262 (323)
67 3t9t_A Tyrosine-protein kinase 100.0 3.8E-41 1.3E-45 341.5 21.2 250 373-670 14-264 (267)
68 3op5_A Serine/threonine-protei 100.0 3.7E-41 1.3E-45 357.7 22.0 266 373-670 41-329 (364)
69 3c0i_A Peripheral plasma membr 100.0 2.2E-41 7.4E-46 357.3 19.9 250 372-664 29-287 (351)
70 3kex_A Receptor tyrosine-prote 100.0 4E-41 1.4E-45 351.7 21.6 253 373-673 19-279 (325)
71 1kob_A Twitchin; kinase, intra 100.0 4.4E-41 1.5E-45 358.4 22.1 246 373-664 57-305 (387)
72 4f0f_A Serine/threonine-protei 100.0 7.8E-41 2.7E-45 343.1 23.1 246 373-668 25-287 (287)
73 2izr_A Casein kinase I isoform 100.0 4.4E-41 1.5E-45 352.2 21.6 259 373-669 15-280 (330)
74 1luf_A Muscle-specific tyrosin 100.0 2.3E-41 7.9E-46 356.3 19.6 260 373-673 53-338 (343)
75 1ob3_A PFPK5, cell division co 100.0 5.2E-41 1.8E-45 344.6 21.6 258 373-664 8-281 (288)
76 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-41 5.2E-46 374.7 18.8 251 373-670 226-478 (495)
77 1mp8_A Focal adhesion kinase 1 100.0 1.6E-41 5.3E-46 347.2 17.5 251 373-671 21-277 (281)
78 3qup_A Tyrosine-protein kinase 100.0 2.3E-41 8E-46 353.2 18.7 258 372-670 28-298 (323)
79 3mdy_A Bone morphogenetic prot 100.0 1.1E-40 3.8E-45 350.1 24.0 263 372-673 42-334 (337)
80 4ejn_A RAC-alpha serine/threon 100.0 3.4E-41 1.1E-45 367.8 20.7 263 373-684 154-425 (446)
81 2eva_A TAK1 kinase - TAB1 chim 100.0 7.5E-41 2.6E-45 346.6 22.2 249 373-670 14-263 (307)
82 1rjb_A FL cytokine receptor; k 100.0 2.5E-41 8.5E-46 356.3 18.7 265 372-676 50-340 (344)
83 3v8s_A RHO-associated protein 100.0 2E-41 7E-46 363.0 18.3 245 373-665 75-331 (410)
84 4fvq_A Tyrosine-protein kinase 100.0 1.9E-41 6.5E-46 348.0 17.2 248 373-673 14-278 (289)
85 3c1x_A Hepatocyte growth facto 100.0 4.5E-41 1.6E-45 357.2 20.6 257 373-673 95-358 (373)
86 1csn_A Casein kinase-1; phosph 100.0 1.1E-40 3.7E-45 343.9 22.8 259 373-670 16-283 (298)
87 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-41 4E-46 356.0 15.7 240 373-664 15-259 (336)
88 2zv2_A Calcium/calmodulin-depe 100.0 6.9E-41 2.4E-45 345.5 20.9 243 373-664 19-293 (298)
89 2r5t_A Serine/threonine-protei 100.0 7.5E-41 2.6E-45 354.8 21.6 245 373-667 44-293 (373)
90 2pmi_A Negative RE, cyclin-dep 100.0 5.8E-41 2E-45 349.1 20.3 263 373-664 11-294 (317)
91 2h8h_A Proto-oncogene tyrosine 100.0 1.5E-41 5.1E-46 378.2 16.9 259 373-679 273-532 (535)
92 3dtc_A Mitogen-activated prote 100.0 6.7E-41 2.3E-45 340.5 20.1 244 373-668 13-271 (271)
93 3kn6_A Ribosomal protein S6 ki 100.0 2.7E-41 9.2E-46 352.7 17.6 248 373-664 17-271 (325)
94 3qd2_B Eukaryotic translation 100.0 1.3E-40 4.4E-45 348.7 22.7 256 373-664 12-326 (332)
95 2w4o_A Calcium/calmodulin-depe 100.0 4.2E-41 1.4E-45 354.8 18.8 244 373-664 59-306 (349)
96 4aw2_A Serine/threonine-protei 100.0 6.7E-41 2.3E-45 361.8 20.7 247 373-664 80-339 (437)
97 1u59_A Tyrosine-protein kinase 100.0 5.1E-41 1.7E-45 344.5 18.8 261 374-680 17-282 (287)
98 2ivs_A Proto-oncogene tyrosine 100.0 4.2E-41 1.4E-45 349.7 18.2 257 373-670 29-311 (314)
99 3o0g_A Cell division protein k 100.0 8E-41 2.7E-45 343.9 19.9 257 373-664 8-283 (292)
100 3gni_B Strad alpha; kinase fol 100.0 1E-40 3.5E-45 357.7 21.5 273 373-669 31-341 (389)
101 3gxj_A TGF-beta receptor type- 100.0 1.1E-42 3.7E-47 359.7 5.7 261 373-672 9-299 (303)
102 3kmu_A ILK, integrin-linked ki 100.0 1.1E-40 3.7E-45 338.8 19.8 246 373-670 16-270 (271)
103 2y94_A 5'-AMP-activated protei 100.0 1E-40 3.4E-45 364.0 20.8 241 373-664 22-267 (476)
104 3uc3_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 353.2 20.5 246 373-664 26-275 (361)
105 1qpc_A LCK kinase; alpha beta 100.0 5.6E-41 1.9E-45 342.7 17.6 256 373-676 19-275 (279)
106 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-40 4.1E-45 352.3 20.6 267 373-684 60-342 (355)
107 2acx_A G protein-coupled recep 100.0 1.5E-40 5.3E-45 367.3 22.2 247 373-664 190-445 (576)
108 1t46_A HOMO sapiens V-KIT hard 100.0 6.8E-41 2.3E-45 348.0 18.2 258 373-670 29-307 (313)
109 2ozo_A Tyrosine-protein kinase 100.0 7.6E-41 2.6E-45 377.7 19.9 254 374-673 343-601 (613)
110 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.5E-40 8.6E-45 364.9 23.5 250 373-664 191-449 (543)
111 2v62_A Serine/threonine-protei 100.0 8.3E-41 2.8E-45 352.3 18.7 265 373-670 43-328 (345)
112 1mqb_A Ephrin type-A receptor 100.0 3.1E-40 1.1E-44 346.1 22.9 254 373-671 50-310 (333)
113 2eue_A Carbon catabolite derep 100.0 2.1E-40 7.3E-45 337.6 20.9 239 374-664 20-263 (275)
114 4e5w_A Tyrosine-protein kinase 100.0 1E-40 3.5E-45 344.8 18.7 257 373-669 27-301 (302)
115 2ac3_A MAP kinase-interacting 100.0 1.9E-40 6.7E-45 345.1 20.8 257 374-664 20-296 (316)
116 1b6c_B TGF-B superfamily recep 100.0 1.7E-40 5.8E-45 349.6 20.5 261 372-671 47-337 (342)
117 3ork_A Serine/threonine protei 100.0 6.8E-41 2.3E-45 347.7 17.2 254 373-669 18-280 (311)
118 1u5q_A Serine/threonine protei 100.0 1E-40 3.4E-45 351.4 18.7 241 373-665 60-307 (348)
119 2vd5_A DMPK protein; serine/th 100.0 1.1E-40 3.6E-45 357.7 18.9 246 373-664 67-328 (412)
120 3lxl_A Tyrosine-protein kinase 100.0 6E-41 2E-45 350.8 16.6 259 373-671 29-304 (327)
121 1nxk_A MAP kinase-activated pr 100.0 1.8E-40 6.3E-45 356.1 20.6 246 373-664 68-322 (400)
122 3f3z_A Calcium/calmodulin-depe 100.0 5.1E-40 1.7E-44 335.2 22.9 244 373-664 15-262 (277)
123 3f66_A Hepatocyte growth facto 100.0 3.9E-40 1.3E-44 339.8 22.1 255 373-671 31-292 (298)
124 3pls_A Macrophage-stimulating 100.0 3.2E-40 1.1E-44 340.4 21.3 256 373-671 27-288 (298)
125 2pvf_A Fibroblast growth facto 100.0 1.5E-40 5.1E-45 348.8 19.0 257 373-670 41-318 (334)
126 4eut_A Serine/threonine-protei 100.0 1.8E-40 6.2E-45 356.3 20.0 266 373-669 15-308 (396)
127 2a2a_A Death-associated protei 100.0 5.8E-40 2E-44 342.3 23.0 246 372-664 17-273 (321)
128 2jii_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 351.2 18.9 262 373-670 48-336 (352)
129 3fdn_A Serine/threonine-protei 100.0 4E-40 1.4E-44 336.4 21.1 240 373-664 15-258 (279)
130 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-40 5.3E-45 346.1 18.3 258 373-672 37-312 (318)
131 3cc6_A Protein tyrosine kinase 100.0 3.1E-40 1.1E-44 337.6 20.2 250 373-671 18-274 (281)
132 3lzb_A Epidermal growth factor 100.0 2.3E-40 7.7E-45 346.1 19.6 254 373-673 21-281 (327)
133 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-40 6.2E-45 340.7 18.4 254 373-670 30-288 (289)
134 2h34_A Serine/threonine-protei 100.0 9.6E-40 3.3E-44 338.7 23.9 254 373-672 40-298 (309)
135 2wqm_A Serine/threonine-protei 100.0 2.8E-40 9.5E-45 343.0 19.9 259 373-673 38-300 (310)
136 3p1a_A MYT1 kinase, membrane-a 100.0 3.3E-40 1.1E-44 342.5 20.3 240 372-664 62-305 (311)
137 3cok_A Serine/threonine-protei 100.0 1.7E-40 5.7E-45 339.0 17.6 243 373-664 17-263 (278)
138 3brb_A Proto-oncogene tyrosine 100.0 3.2E-40 1.1E-44 343.0 20.0 258 372-670 39-308 (313)
139 3kfa_A Tyrosine-protein kinase 100.0 2.8E-40 9.5E-45 339.1 19.1 252 373-671 19-272 (288)
140 2qr7_A Ribosomal protein S6 ki 100.0 1.8E-40 6.1E-45 348.5 17.8 245 373-664 28-278 (342)
141 2buj_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 346.0 17.0 267 373-673 35-309 (317)
142 3pfq_A PKC-B, PKC-beta, protei 100.0 5.8E-40 2E-44 374.0 23.0 242 373-664 347-598 (674)
143 3is5_A Calcium-dependent prote 100.0 6.4E-40 2.2E-44 335.9 21.0 247 373-664 28-279 (285)
144 4fl3_A Tyrosine-protein kinase 100.0 2.1E-40 7.3E-45 375.0 19.0 250 373-669 375-630 (635)
145 3dbq_A Dual specificity protei 100.0 1.1E-40 3.8E-45 351.0 15.5 246 373-665 15-275 (343)
146 2rku_A Serine/threonine-protei 100.0 7.1E-40 2.4E-44 337.2 21.1 242 373-664 21-266 (294)
147 3ttj_A Mitogen-activated prote 100.0 7.1E-40 2.4E-44 357.9 22.1 254 373-664 68-356 (464)
148 2xir_A Vascular endothelial gr 100.0 3.3E-40 1.1E-44 343.3 18.6 259 373-671 33-311 (316)
149 2owb_A Serine/threonine-protei 100.0 5.8E-40 2E-44 344.3 20.6 242 373-664 47-292 (335)
150 1p4o_A Insulin-like growth fac 100.0 5.5E-40 1.9E-44 342.7 20.1 258 373-671 31-300 (322)
151 3kk8_A Calcium/calmodulin depe 100.0 1.3E-39 4.4E-44 333.4 22.4 245 373-664 12-262 (284)
152 2w1i_A JAK2; chromosomal rearr 100.0 3.7E-40 1.3E-44 344.5 18.6 259 373-670 47-322 (326)
153 2clq_A Mitogen-activated prote 100.0 8.7E-40 3E-44 336.6 21.1 247 374-664 29-279 (295)
154 2zmd_A Dual specificity protei 100.0 5.3E-40 1.8E-44 351.4 20.1 245 373-664 62-321 (390)
155 2a19_B Interferon-induced, dou 100.0 4.8E-40 1.6E-44 336.5 18.9 245 373-674 17-278 (284)
156 3dls_A PAS domain-containing s 100.0 3.4E-40 1.1E-44 345.8 18.1 235 373-664 30-275 (335)
157 3g2f_A Bone morphogenetic prot 100.0 4.4E-40 1.5E-44 345.5 18.9 270 373-675 19-323 (336)
158 2i1m_A Macrophage colony-stimu 100.0 1.6E-40 5.5E-45 348.4 15.5 261 372-672 51-328 (333)
159 3llt_A Serine/threonine kinase 100.0 1.3E-39 4.3E-44 345.5 22.4 252 373-664 41-356 (360)
160 2jam_A Calcium/calmodulin-depe 100.0 1.1E-39 3.9E-44 337.3 21.4 244 373-664 15-262 (304)
161 4agu_A Cyclin-dependent kinase 100.0 6.7E-40 2.3E-44 340.2 19.6 258 373-664 9-285 (311)
162 4hgt_A Casein kinase I isoform 100.0 1.2E-39 4.2E-44 335.6 21.0 260 373-671 15-281 (296)
163 3g33_A Cell division protein k 100.0 1.4E-39 4.6E-44 337.5 21.4 258 373-664 15-297 (308)
164 3hko_A Calcium/calmodulin-depe 100.0 1E-39 3.5E-44 344.1 20.4 257 372-664 31-331 (345)
165 1xbb_A Tyrosine-protein kinase 100.0 5.9E-40 2E-44 337.3 18.1 252 374-672 24-281 (291)
166 3uzp_A CKI-delta, CKID, casein 100.0 2E-39 6.7E-44 334.1 22.0 260 373-670 15-280 (296)
167 3eqc_A Dual specificity mitoge 100.0 5.8E-40 2E-44 348.1 18.5 247 373-664 39-325 (360)
168 2yex_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 331.9 20.3 247 373-664 13-262 (276)
169 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9.8E-40 3.4E-44 346.9 20.2 248 373-670 71-339 (365)
170 3bhy_A Death-associated protei 100.0 1.9E-39 6.6E-44 331.9 21.7 249 373-668 11-272 (283)
171 3mtl_A Cell division protein k 100.0 3.5E-40 1.2E-44 344.3 16.2 256 373-664 8-282 (324)
172 1fvr_A Tyrosine-protein kinase 100.0 9.1E-40 3.1E-44 341.8 19.3 257 373-673 31-303 (327)
173 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7E-40 2.4E-44 342.8 18.4 255 373-664 40-319 (329)
174 1byg_A CSK, protein (C-termina 100.0 5.5E-40 1.9E-44 335.2 17.0 245 373-670 27-273 (278)
175 3oz6_A Mitogen-activated prote 100.0 9E-40 3.1E-44 350.1 19.5 280 373-669 15-336 (388)
176 1ua2_A CAK, cell division prot 100.0 1.2E-39 4.2E-44 343.5 20.1 256 373-665 16-293 (346)
177 3lm5_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 338.9 21.4 247 373-664 35-288 (327)
178 1cm8_A Phosphorylated MAP kina 100.0 1.2E-39 4.3E-44 345.8 20.0 253 373-669 31-315 (367)
179 2h6d_A 5'-AMP-activated protei 100.0 1.9E-39 6.4E-44 330.7 20.5 241 373-664 17-262 (276)
180 2vgo_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 332.0 20.7 240 373-664 20-263 (284)
181 2j7t_A Serine/threonine-protei 100.0 1E-39 3.4E-44 337.4 18.4 246 373-664 25-276 (302)
182 1t4h_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 330.6 22.5 242 373-664 32-283 (290)
183 3i6u_A CDS1, serine/threonine- 100.0 6.7E-40 2.3E-44 354.1 17.2 246 372-664 140-400 (419)
184 2yfx_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44 341.3 18.1 258 373-671 36-305 (327)
185 3mwu_A Calmodulin-domain prote 100.0 3.8E-39 1.3E-43 355.6 22.9 244 373-664 28-277 (486)
186 3mi9_A Cell division protein k 100.0 3.7E-39 1.3E-43 340.6 21.8 262 373-664 23-312 (351)
187 4aaa_A Cyclin-dependent kinase 100.0 2.5E-39 8.6E-44 339.0 20.2 258 373-664 31-307 (331)
188 3lij_A Calcium/calmodulin depe 100.0 4.3E-39 1.5E-43 355.8 23.1 244 373-664 43-292 (494)
189 3nyv_A Calmodulin-domain prote 100.0 2.2E-39 7.4E-44 357.6 20.7 244 373-664 32-282 (484)
190 2y7j_A Phosphorylase B kinase 100.0 4.8E-39 1.6E-43 341.2 22.3 245 373-664 100-360 (365)
191 3byv_A Rhoptry kinase; malaria 100.0 9.9E-41 3.4E-45 356.1 9.3 239 373-664 79-360 (377)
192 3com_A Serine/threonine-protei 100.0 6E-39 2.1E-43 333.5 22.0 244 373-664 35-279 (314)
193 3a7i_A MST3 kinase, serine/thr 100.0 7.3E-39 2.5E-43 331.1 22.4 243 373-665 28-272 (303)
194 2w5a_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44 332.7 16.2 252 373-669 12-273 (279)
195 3rgf_A Cyclin-dependent kinase 100.0 1.2E-39 4.1E-44 351.1 16.9 264 372-664 26-334 (405)
196 2r3i_A Cell division protein k 100.0 6.5E-39 2.2E-43 330.8 21.6 256 373-664 9-284 (299)
197 1u46_A ACK-1, activated CDC42 100.0 7.5E-40 2.6E-44 336.4 14.4 254 373-671 24-285 (291)
198 1x8b_A WEE1HU, WEE1-like prote 100.0 3.5E-39 1.2E-43 330.7 18.6 240 373-664 17-280 (289)
199 3nsz_A CK II alpha, casein kin 100.0 9E-39 3.1E-43 334.6 21.7 253 373-664 42-320 (330)
200 3q5i_A Protein kinase; CDPK, m 100.0 8.1E-39 2.8E-43 354.4 22.1 244 373-664 42-302 (504)
201 3rp9_A Mitogen-activated prote 100.0 2.1E-39 7.1E-44 355.1 17.1 209 373-591 59-280 (458)
202 3sv0_A Casein kinase I-like; t 100.0 1.1E-38 3.9E-43 348.5 22.7 260 373-669 13-277 (483)
203 3kvw_A DYRK2, dual specificity 100.0 8E-39 2.8E-43 346.6 21.2 191 373-598 103-302 (429)
204 1z57_A Dual specificity protei 100.0 1.1E-38 3.8E-43 335.0 21.1 255 373-664 20-329 (339)
205 2wtk_C Serine/threonine-protei 100.0 1.6E-38 5.5E-43 328.8 21.8 245 373-664 11-264 (305)
206 3q60_A ROP5B; pseudokinase, tr 100.0 1.4E-39 4.6E-44 346.6 14.1 248 373-664 68-353 (371)
207 3ll6_A Cyclin G-associated kin 100.0 4.3E-39 1.5E-43 337.9 17.6 260 373-670 34-308 (337)
208 2xrw_A Mitogen-activated prote 100.0 7.1E-39 2.4E-43 340.9 19.3 251 373-664 31-319 (371)
209 2vwi_A Serine/threonine-protei 100.0 1.6E-39 5.6E-44 335.9 14.0 261 373-664 21-288 (303)
210 3an0_A Dual specificity mitoge 100.0 6.9E-39 2.4E-43 337.0 18.5 247 373-664 57-311 (340)
211 1wak_A Serine/threonine-protei 100.0 8.9E-39 3E-43 343.6 19.7 257 373-664 43-392 (397)
212 3fme_A Dual specificity mitoge 100.0 1.8E-39 6.2E-44 333.3 13.6 247 373-664 13-267 (290)
213 1phk_A Phosphorylase kinase; g 100.0 2E-38 7E-43 326.9 21.2 245 373-664 23-284 (298)
214 2fst_X Mitogen-activated prote 100.0 4.4E-39 1.5E-43 341.3 16.5 251 373-664 35-312 (367)
215 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-38 3.9E-43 333.3 19.4 245 373-664 30-287 (326)
216 2ycf_A Serine/threonine-protei 100.0 5.9E-39 2E-43 334.9 17.0 245 373-664 16-275 (322)
217 3n9x_A Phosphotransferase; mal 100.0 1.5E-38 5.3E-43 345.0 20.3 212 373-595 32-252 (432)
218 2j0j_A Focal adhesion kinase 1 100.0 7.5E-39 2.6E-43 363.7 18.6 251 372-670 395-651 (656)
219 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-38 4E-43 332.1 17.8 255 373-672 39-304 (319)
220 2i6l_A Mitogen-activated prote 100.0 9.9E-39 3.4E-43 332.6 17.0 256 373-664 17-306 (320)
221 4e7w_A Glycogen synthase kinas 100.0 1.3E-38 4.5E-43 341.3 18.3 261 373-669 46-329 (394)
222 1j1b_A Glycogen synthase kinas 100.0 1E-38 3.5E-43 345.0 17.6 257 373-664 60-337 (420)
223 3qyz_A Mitogen-activated prote 100.0 5.8E-38 2E-42 333.1 22.8 257 373-664 33-314 (364)
224 4exu_A Mitogen-activated prote 100.0 2.3E-38 7.7E-43 337.0 19.6 254 373-669 48-331 (371)
225 2rio_A Serine/threonine-protei 100.0 1.2E-38 4E-43 346.0 17.7 253 373-664 21-296 (434)
226 3pg1_A Mitogen-activated prote 100.0 2.3E-38 7.7E-43 336.1 19.3 256 373-664 28-317 (362)
227 2pml_X PFPK7, Ser/Thr protein 100.0 1.8E-38 6.2E-43 335.0 18.0 256 373-664 37-323 (348)
228 1zy4_A Serine/threonine-protei 100.0 4E-38 1.4E-42 325.2 20.0 258 373-664 12-284 (303)
229 1blx_A Cyclin-dependent kinase 100.0 4E-38 1.4E-42 329.1 20.0 256 373-664 17-297 (326)
230 3eb0_A Putative uncharacterize 100.0 3.1E-38 1.1E-42 337.5 19.4 256 373-664 13-322 (383)
231 2vx3_A Dual specificity tyrosi 100.0 7.3E-38 2.5E-42 334.5 22.2 193 373-598 60-261 (382)
232 2wei_A Calmodulin-domain prote 100.0 6.7E-38 2.3E-42 321.3 20.5 244 373-664 28-277 (287)
233 3e3p_A Protein kinase, putativ 100.0 3.7E-38 1.2E-42 334.2 18.8 264 373-669 29-322 (360)
234 2eu9_A Dual specificity protei 100.0 8.2E-38 2.8E-42 330.6 21.1 255 373-664 25-334 (355)
235 3cek_A Dual specificity protei 100.0 1.9E-38 6.6E-43 329.6 15.3 245 373-664 34-293 (313)
236 3coi_A Mitogen-activated prote 100.0 1E-37 3.6E-42 329.8 20.8 255 373-669 30-313 (353)
237 3fhr_A MAP kinase-activated pr 100.0 3.1E-38 1E-42 331.2 16.4 245 373-664 35-288 (336)
238 1q8y_A SR protein kinase; tran 100.0 4.9E-38 1.7E-42 334.9 17.8 257 373-664 25-334 (373)
239 3p23_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42 339.8 18.0 245 373-664 30-284 (432)
240 2b9h_A MAP kinase FUS3, mitoge 100.0 1.3E-37 4.5E-42 329.0 20.5 270 373-669 17-313 (353)
241 3a99_A Proto-oncogene serine/t 100.0 6.6E-38 2.3E-42 326.5 14.8 234 373-664 49-294 (320)
242 2iwi_A Serine/threonine-protei 100.0 9.2E-38 3.2E-42 324.3 15.8 234 373-664 37-284 (312)
243 3aln_A Dual specificity mitoge 100.0 2.2E-37 7.6E-42 323.7 17.8 251 373-664 28-286 (327)
244 2dyl_A Dual specificity mitoge 100.0 5.5E-37 1.9E-41 319.2 19.4 245 373-664 31-284 (318)
245 3uqc_A Probable conserved tran 100.0 2.2E-36 7.4E-41 309.4 19.7 228 373-673 37-268 (286)
246 3qa8_A MGC80376 protein; kinas 100.0 5.3E-37 1.8E-41 342.2 13.8 255 373-661 20-295 (676)
247 2pzi_A Probable serine/threoni 100.0 3.1E-36 1E-40 345.6 18.6 233 373-669 86-327 (681)
248 3m2w_A MAP kinase-activated pr 100.0 8.7E-36 3E-40 307.4 20.0 222 373-664 24-257 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.8E-36 6.3E-41 326.5 13.6 239 373-664 84-364 (413)
250 2vuw_A Serine/threonine-protei 100.0 1.4E-35 4.7E-40 311.3 11.5 238 372-664 25-332 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 4.8E-33 1.7E-37 288.5 13.6 233 15-250 3-310 (313)
252 4azs_A Methyltransferase WBDD; 100.0 7E-31 2.4E-35 292.7 3.9 185 375-595 242-438 (569)
253 4ecn_A Leucine-rich repeat pro 99.9 3.7E-28 1.2E-32 281.4 11.3 217 15-244 266-608 (876)
254 3rgz_A Protein brassinosteroid 99.9 9.9E-28 3.4E-32 279.0 13.1 192 57-256 490-751 (768)
255 3rgz_A Protein brassinosteroid 99.9 1.1E-27 3.9E-32 278.5 12.6 220 11-242 5-258 (768)
256 4eco_A Uncharacterized protein 99.9 1E-27 3.5E-32 272.6 11.5 217 17-243 29-365 (636)
257 4fcg_A Uncharacterized protein 99.9 3.4E-27 1.2E-31 246.0 9.8 220 14-245 23-267 (328)
258 3en9_A Glycoprotease, O-sialog 99.9 1.2E-26 4.2E-31 257.0 7.7 188 372-595 341-538 (540)
259 2o6q_A Variable lymphocyte rec 99.9 1.3E-24 4.4E-29 220.1 16.4 183 58-247 38-221 (270)
260 3m19_A Variable lymphocyte rec 99.9 1.1E-23 3.7E-28 210.9 14.2 191 45-246 3-194 (251)
261 2z62_A TOLL-like receptor 4, v 99.9 7.4E-23 2.5E-27 207.9 16.3 190 57-247 28-240 (276)
262 1p9a_G Platelet glycoprotein I 99.9 8.6E-23 2.9E-27 208.7 13.5 181 57-247 31-211 (290)
263 1zar_A RIO2 kinase; serine kin 99.9 2.1E-23 7.2E-28 211.9 8.1 128 373-521 96-241 (282)
264 3m19_A Variable lymphocyte rec 99.9 2.4E-22 8.3E-27 201.1 14.9 172 48-226 15-197 (251)
265 1ozn_A Reticulon 4 receptor; N 99.9 2.6E-22 9E-27 204.9 12.8 188 58-246 33-240 (285)
266 2z80_A TOLL-like receptor 2, v 99.9 4E-22 1.4E-26 210.1 11.0 179 44-224 27-238 (353)
267 2o6s_A Variable lymphocyte rec 99.9 1.8E-21 6.2E-26 188.8 14.3 170 46-229 6-186 (208)
268 3zyi_A Leucine-rich repeat-con 99.9 1.6E-21 5.4E-26 212.8 14.8 198 49-249 56-308 (452)
269 4fcg_A Uncharacterized protein 99.9 1.2E-21 4.1E-26 203.9 12.1 179 57-246 104-292 (328)
270 3e6j_A Variable lymphocyte rec 99.9 5.9E-21 2E-25 188.0 15.3 162 43-225 15-176 (229)
271 3zyj_A Leucine-rich repeat-con 99.8 3.2E-21 1.1E-25 209.6 14.1 198 49-249 45-297 (440)
272 1ozn_A Reticulon 4 receptor; N 99.8 3.6E-21 1.2E-25 196.4 13.6 182 53-244 7-190 (285)
273 3rfs_A Internalin B, repeat mo 99.8 8.2E-21 2.8E-25 192.3 15.6 181 57-248 41-222 (272)
274 2z81_A CD282 antigen, TOLL-lik 99.8 5.1E-21 1.8E-25 214.2 11.2 161 46-207 3-177 (549)
275 3j0a_A TOLL-like receptor 5; m 99.8 1.1E-20 3.7E-25 222.1 13.6 190 58-249 291-565 (844)
276 3vq2_A TLR4, TOLL-like recepto 99.8 1.6E-20 5.4E-25 212.9 14.0 197 44-243 4-216 (606)
277 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-20 4.2E-25 184.4 11.2 155 61-225 15-170 (220)
278 2z66_A Variable lymphocyte rec 99.8 4.6E-21 1.6E-25 197.8 8.0 183 57-247 78-264 (306)
279 4g8a_A TOLL-like receptor 4; l 99.8 2.4E-20 8E-25 212.4 13.8 183 45-230 25-223 (635)
280 3rfs_A Internalin B, repeat mo 99.8 5.6E-20 1.9E-24 186.1 14.8 162 56-226 62-223 (272)
281 3v47_A TOLL-like receptor 5B a 99.8 1.5E-20 5.1E-25 205.3 11.0 158 44-201 5-177 (455)
282 3vq2_A TLR4, TOLL-like recepto 99.8 1.1E-20 3.8E-25 214.2 10.2 185 57-249 376-563 (606)
283 3v47_A TOLL-like receptor 5B a 99.8 2.2E-20 7.6E-25 203.9 12.2 120 122-248 292-412 (455)
284 2v9t_B SLIT homolog 2 protein 99.8 4.3E-20 1.5E-24 180.5 12.6 151 62-222 16-166 (220)
285 2z66_A Variable lymphocyte rec 99.8 1.6E-20 5.3E-25 193.8 9.9 189 47-243 7-211 (306)
286 3t6q_A CD180 antigen; protein- 99.8 4.3E-20 1.5E-24 209.3 12.3 184 57-248 376-564 (606)
287 2id5_A Lingo-1, leucine rich r 99.8 5.6E-20 1.9E-24 202.0 12.8 189 49-244 13-213 (477)
288 1wwl_A Monocyte differentiatio 99.8 1.1E-20 3.7E-25 195.5 6.4 178 57-243 95-286 (312)
289 1ogq_A PGIP-2, polygalacturona 99.8 1.7E-20 5.7E-25 194.1 7.8 164 57-223 125-307 (313)
290 2xot_A Amphoterin-induced prot 99.8 6.1E-20 2.1E-24 193.9 12.3 177 61-247 22-205 (361)
291 2xot_A Amphoterin-induced prot 99.8 5.4E-20 1.8E-24 194.3 11.2 172 47-223 18-204 (361)
292 1ziw_A TOLL-like receptor 3; i 99.8 9.5E-20 3.2E-24 209.4 14.2 186 57-249 405-627 (680)
293 1wwl_A Monocyte differentiatio 99.8 1.4E-20 5E-25 194.5 5.6 178 56-244 120-309 (312)
294 3oja_A Leucine-rich immune mol 99.8 1.9E-20 6.6E-25 205.5 6.9 177 58-244 35-227 (487)
295 4b8c_D Glucose-repressible alc 99.8 1.4E-20 5E-25 216.0 5.9 204 16-229 130-362 (727)
296 4glp_A Monocyte differentiatio 99.8 5.9E-20 2E-24 189.8 9.5 182 57-244 91-285 (310)
297 4eco_A Uncharacterized protein 99.8 2.6E-20 8.8E-25 211.7 7.4 167 68-244 194-390 (636)
298 2ft3_A Biglycan; proteoglycan, 99.8 4.7E-19 1.6E-23 184.9 16.2 188 47-244 33-254 (332)
299 2xwt_C Thyrotropin receptor; s 99.8 1.2E-19 4.1E-24 180.0 11.1 178 57-244 31-218 (239)
300 2o6q_A Variable lymphocyte rec 99.8 3.8E-19 1.3E-23 179.8 14.8 162 57-225 61-222 (270)
301 2v70_A SLIT-2, SLIT homolog 2 99.8 1.9E-19 6.5E-24 176.0 11.9 148 47-195 11-170 (220)
302 3t6q_A CD180 antigen; protein- 99.8 1.5E-19 5.1E-24 204.8 11.6 181 57-242 33-213 (606)
303 1zth_A RIO1 serine protein kin 99.8 1.8E-19 6.1E-24 180.7 10.8 132 373-522 53-219 (258)
304 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 1.2E-19 4E-24 203.7 10.2 161 78-248 350-514 (562)
305 1xku_A Decorin; proteoglycan, 99.8 9.3E-19 3.2E-23 182.5 16.1 189 46-244 30-253 (330)
306 2z7x_B TOLL-like receptor 1, v 99.8 9.5E-20 3.2E-24 202.5 9.0 161 78-248 321-485 (520)
307 3oja_B Anopheles plasmodium-re 99.8 3.6E-19 1.2E-23 201.0 13.8 142 58-200 52-193 (597)
308 2v9t_B SLIT homolog 2 protein 99.8 2.7E-19 9.1E-24 174.9 10.8 155 84-248 14-169 (220)
309 3oja_B Anopheles plasmodium-re 99.8 4.1E-19 1.4E-23 200.5 13.9 111 57-167 75-185 (597)
310 3j0a_A TOLL-like receptor 5; m 99.8 3.9E-19 1.3E-23 208.8 13.9 175 47-227 14-193 (844)
311 2id5_A Lingo-1, leucine rich r 99.8 2.1E-19 7.3E-24 197.4 10.9 93 156-249 227-338 (477)
312 1p9a_G Platelet glycoprotein I 99.8 6.2E-19 2.1E-23 180.0 13.0 175 57-244 10-185 (290)
313 3cvr_A Invasion plasmid antige 99.8 3.3E-19 1.1E-23 197.5 10.1 153 38-221 35-193 (571)
314 2xwt_C Thyrotropin receptor; s 99.8 3.3E-19 1.1E-23 176.8 8.7 171 57-239 55-234 (239)
315 4ecn_A Leucine-rich repeat pro 99.8 2.5E-19 8.7E-24 207.5 8.6 177 56-244 447-657 (876)
316 2o6s_A Variable lymphocyte rec 99.8 3.3E-18 1.1E-22 165.7 15.1 157 60-226 10-166 (208)
317 2z63_A TOLL-like receptor 4, v 99.8 1E-18 3.6E-23 196.4 13.3 182 57-241 28-210 (570)
318 3o6n_A APL1; leucine-rich repe 99.8 9.3E-19 3.2E-23 187.0 11.7 142 57-199 45-186 (390)
319 3o6n_A APL1; leucine-rich repe 99.8 2E-18 6.8E-23 184.4 13.9 111 57-167 69-179 (390)
320 3o53_A Protein LRIM1, AGAP0063 99.8 1.1E-19 3.7E-24 188.4 3.4 169 57-243 58-226 (317)
321 3e6j_A Variable lymphocyte rec 99.8 3.2E-18 1.1E-22 168.3 13.4 154 83-247 21-175 (229)
322 2z62_A TOLL-like receptor 4, v 99.8 2.2E-18 7.7E-23 174.8 12.4 165 57-227 52-243 (276)
323 2z63_A TOLL-like receptor 4, v 99.8 3.3E-19 1.1E-23 200.5 6.4 184 57-248 347-535 (570)
324 1ziw_A TOLL-like receptor 3; i 99.8 2.1E-18 7E-23 198.2 13.1 165 57-228 25-191 (680)
325 1xku_A Decorin; proteoglycan, 99.8 3E-18 1E-22 178.7 13.0 152 57-221 100-253 (330)
326 4g8a_A TOLL-like receptor 4; l 99.8 2.2E-18 7.5E-23 196.1 12.4 175 44-229 19-194 (635)
327 1w8a_A SLIT protein; signaling 99.7 5.3E-18 1.8E-22 161.9 12.9 131 61-195 12-143 (192)
328 2ft3_A Biglycan; proteoglycan, 99.7 5.9E-18 2E-22 176.6 13.5 172 57-242 102-275 (332)
329 1h6u_A Internalin H; cell adhe 99.7 7E-18 2.4E-22 173.9 12.9 170 56-245 62-231 (308)
330 4ezg_A Putative uncharacterize 99.7 5.3E-18 1.8E-22 162.7 10.8 152 57-222 44-195 (197)
331 1w8a_A SLIT protein; signaling 99.7 7.5E-18 2.6E-22 160.9 10.4 127 47-173 8-146 (192)
332 1h6t_A Internalin B; cell adhe 99.7 1.5E-17 5.2E-22 169.8 12.8 169 57-245 46-214 (291)
333 2z80_A TOLL-like receptor 2, v 99.7 1E-17 3.4E-22 176.4 10.6 180 51-242 27-209 (353)
334 2z7x_B TOLL-like receptor 1, v 99.7 1.1E-17 3.8E-22 185.7 10.8 160 56-225 323-485 (520)
335 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 1.5E-17 5.2E-22 186.4 10.6 161 56-226 352-515 (562)
336 2o6r_A Variable lymphocyte rec 99.7 4.6E-17 1.6E-21 153.2 12.2 135 47-195 7-141 (177)
337 1h6u_A Internalin H; cell adhe 99.7 6.2E-17 2.1E-21 166.8 14.0 169 57-245 41-209 (308)
338 3zyi_A Leucine-rich repeat-con 99.7 3.3E-17 1.1E-21 178.5 12.0 178 53-242 51-229 (452)
339 4glp_A Monocyte differentiatio 99.7 8.4E-18 2.9E-22 173.6 6.8 177 56-244 116-307 (310)
340 2ell_A Acidic leucine-rich nuc 99.7 5E-17 1.7E-21 151.6 11.4 132 81-222 24-161 (168)
341 3zyj_A Leucine-rich repeat-con 99.7 3.5E-17 1.2E-21 177.6 11.2 157 57-222 112-293 (440)
342 3oja_A Leucine-rich immune mol 99.7 3.5E-18 1.2E-22 187.5 3.1 174 56-247 79-253 (487)
343 2z81_A CD282 antigen, TOLL-lik 99.7 3.2E-17 1.1E-21 183.3 10.6 164 53-228 3-168 (549)
344 2ell_A Acidic leucine-rich nuc 99.7 4.2E-17 1.4E-21 152.1 9.1 134 57-193 24-162 (168)
345 1m9s_A Internalin B; cell inva 99.7 6.6E-17 2.3E-21 181.0 11.5 125 57-192 65-189 (605)
346 4ay9_X Follicle-stimulating ho 99.7 8.7E-17 3E-21 168.9 11.0 171 47-225 9-219 (350)
347 2je0_A Acidic leucine-rich nuc 99.7 6.1E-17 2.1E-21 147.7 8.4 124 81-207 17-145 (149)
348 4fmz_A Internalin; leucine ric 99.7 1.8E-16 6.3E-21 166.3 13.2 168 58-242 156-344 (347)
349 2je0_A Acidic leucine-rich nuc 99.7 1E-16 3.5E-21 146.2 9.8 129 57-187 17-149 (149)
350 2wfh_A SLIT homolog 2 protein 99.7 1.9E-16 6.3E-21 151.2 12.0 127 61-192 14-140 (193)
351 1h6t_A Internalin B; cell adhe 99.7 1.7E-16 5.9E-21 162.0 11.5 150 56-224 67-216 (291)
352 1o6v_A Internalin A; bacterial 99.7 2.2E-16 7.4E-21 172.7 12.8 136 57-205 199-334 (466)
353 4ezg_A Putative uncharacterize 99.7 1.2E-16 4E-21 153.3 9.1 154 77-243 40-193 (197)
354 1xeu_A Internalin C; cellular 99.7 7.7E-17 2.6E-21 161.9 8.0 147 57-223 41-187 (263)
355 3o53_A Protein LRIM1, AGAP0063 99.7 2E-17 6.8E-22 171.3 3.4 170 57-244 34-204 (317)
356 3cvr_A Invasion plasmid antige 99.7 2.1E-16 7.1E-21 175.1 10.9 164 57-245 80-244 (571)
357 4b8c_D Glucose-repressible alc 99.6 4.7E-17 1.6E-21 186.8 5.1 141 56-200 223-363 (727)
358 4gyi_A RIO2 kinase; protein ki 99.6 5.4E-17 1.8E-21 168.8 5.1 133 372-521 100-264 (397)
359 2wfh_A SLIT homolog 2 protein 99.6 4.5E-16 1.5E-20 148.5 11.1 128 84-222 13-140 (193)
360 1m9s_A Internalin B; cell inva 99.6 3.8E-16 1.3E-20 174.9 12.3 169 57-245 43-211 (605)
361 2o6r_A Variable lymphocyte rec 99.6 7.3E-16 2.5E-20 145.0 11.8 135 83-227 9-143 (177)
362 1xeu_A Internalin C; cellular 99.6 4.3E-16 1.5E-20 156.4 10.4 167 59-246 21-187 (263)
363 1o6v_A Internalin A; bacterial 99.6 9.1E-16 3.1E-20 167.8 13.4 168 57-244 177-344 (466)
364 3bz5_A Internalin-J, INLJ; leu 99.6 9.5E-16 3.2E-20 166.7 12.8 149 57-225 148-303 (457)
365 1dce_A Protein (RAB geranylger 99.6 7.3E-18 2.5E-22 187.7 -5.2 157 58-227 350-552 (567)
366 3bz5_A Internalin-J, INLJ; leu 99.6 3.1E-15 1.1E-19 162.6 14.8 146 57-226 106-251 (457)
367 2ast_B S-phase kinase-associat 99.6 5.3E-17 1.8E-21 169.6 0.7 178 57-242 70-258 (336)
368 4fmz_A Internalin; leucine ric 99.6 1.7E-15 5.7E-20 158.9 12.0 148 57-221 199-346 (347)
369 2ast_B S-phase kinase-associat 99.6 1.2E-16 4.2E-21 166.8 1.3 176 57-241 93-282 (336)
370 2ca6_A RAN GTPase-activating p 99.6 4.1E-17 1.4E-21 173.9 -3.9 159 57-222 60-258 (386)
371 3g06_A SSPH2 (leucine-rich rep 99.6 2.1E-15 7.1E-20 169.1 9.7 164 38-223 14-196 (622)
372 3goz_A Leucine-rich repeat-con 99.6 2.9E-16 1E-20 165.7 1.9 186 56-243 21-237 (362)
373 1a9n_A U2A', U2A'; complex (nu 99.6 2.9E-15 1E-19 140.7 8.4 132 77-221 15-153 (176)
374 1a9n_A U2A', U2A'; complex (nu 99.6 4.5E-15 1.5E-19 139.4 9.2 131 56-192 18-154 (176)
375 1jl5_A Outer protein YOPM; leu 99.6 1.2E-14 4.2E-19 157.8 13.8 159 57-243 111-269 (454)
376 1jl5_A Outer protein YOPM; leu 99.6 1.5E-14 5.2E-19 157.0 14.2 161 56-244 90-250 (454)
377 1ds9_A Outer arm dynein; leuci 99.6 1.3E-17 4.5E-22 160.1 -9.4 134 57-196 18-158 (198)
378 3goz_A Leucine-rich repeat-con 99.6 1E-15 3.5E-20 161.6 4.1 180 61-242 2-207 (362)
379 2ca6_A RAN GTPase-activating p 99.6 3.9E-16 1.3E-20 166.3 0.8 181 57-243 32-256 (386)
380 1dce_A Protein (RAB geranylger 99.5 8.4E-15 2.9E-19 163.0 10.6 108 82-195 442-550 (567)
381 3g06_A SSPH2 (leucine-rich rep 99.5 4.1E-14 1.4E-18 158.6 14.3 54 57-118 81-134 (622)
382 3g39_A Variable lymphocyte rec 99.5 3.2E-14 1.1E-18 132.6 10.6 104 61-167 13-116 (170)
383 3g39_A Variable lymphocyte rec 99.5 6.4E-14 2.2E-18 130.6 11.7 108 83-194 11-118 (170)
384 2r9u_A Variable lymphocyte rec 99.5 6.1E-14 2.1E-18 131.2 10.9 104 60-166 15-118 (174)
385 4ay9_X Follicle-stimulating ho 99.5 3E-14 1E-18 149.5 9.6 142 52-200 7-151 (350)
386 2r9u_A Variable lymphocyte rec 99.5 9.2E-14 3.2E-18 130.0 11.5 106 84-193 15-120 (174)
387 1ds9_A Outer arm dynein; leuci 99.5 1.8E-16 6.2E-21 152.1 -7.6 138 77-226 14-158 (198)
388 2ifg_A High affinity nerve gro 99.5 1.2E-13 4.1E-18 144.8 10.1 108 47-167 8-117 (347)
389 1z7x_W Ribonuclease inhibitor; 99.4 1.3E-14 4.3E-19 158.4 -3.1 161 57-223 170-356 (461)
390 1z7x_W Ribonuclease inhibitor; 99.3 3.3E-14 1.1E-18 155.1 -3.4 181 57-244 199-411 (461)
391 2ifg_A High affinity nerve gro 99.3 1.5E-12 5E-17 136.4 9.0 106 84-193 11-118 (347)
392 3tm0_A Aminoglycoside 3'-phosp 99.3 1.5E-11 5.3E-16 123.2 11.7 135 374-520 21-212 (263)
393 1nd4_A Aminoglycoside 3'-phosp 99.2 6.2E-11 2.1E-15 118.5 10.9 128 376-520 29-213 (264)
394 3sb4_A Hypothetical leucine ri 99.2 1.9E-11 6.4E-16 126.9 6.3 89 128-225 225-314 (329)
395 3un9_A NLR family member X1; l 99.2 4.6E-13 1.6E-17 141.0 -6.0 160 57-223 72-254 (372)
396 3dxp_A Putative acyl-COA dehyd 99.1 4.2E-10 1.4E-14 118.2 10.6 140 374-522 45-249 (359)
397 3sb4_A Hypothetical leucine ri 99.0 1.9E-10 6.5E-15 119.3 7.6 147 57-207 101-326 (329)
398 3un9_A NLR family member X1; l 99.0 1.1E-11 3.8E-16 130.4 -4.6 143 57-200 101-261 (372)
399 3rw6_A Nuclear RNA export fact 99.0 1.6E-11 5.5E-16 121.6 -3.2 157 46-207 77-256 (267)
400 3ogk_B Coronatine-insensitive 98.9 2.5E-11 8.5E-16 136.7 -4.1 180 57-242 318-524 (592)
401 3ogk_B Coronatine-insensitive 98.9 7.6E-11 2.6E-15 132.7 -2.1 147 59-207 140-323 (592)
402 3sg8_A APH(2'')-ID; antibiotic 98.9 1.1E-09 3.7E-14 112.2 5.7 197 374-595 27-287 (304)
403 2p1m_B Transport inhibitor res 98.7 3.9E-10 1.3E-14 126.9 -4.2 127 57-187 105-244 (594)
404 2p1m_B Transport inhibitor res 98.7 4.5E-10 1.5E-14 126.4 -4.5 179 57-243 314-518 (594)
405 4fdw_A Leucine rich hypothetic 98.6 6.3E-08 2.1E-12 102.8 9.8 143 58-207 158-305 (401)
406 2ra8_A Uncharacterized protein 98.6 7.4E-09 2.5E-13 108.0 2.4 161 57-222 139-321 (362)
407 3r70_A Aminoglycoside phosphot 98.6 1.3E-07 4.5E-12 97.3 11.7 132 374-523 44-239 (320)
408 3rw6_A Nuclear RNA export fact 98.6 1.2E-08 4.1E-13 100.9 1.2 106 77-184 137-257 (267)
409 4fdw_A Leucine rich hypothetic 98.5 1.4E-07 4.8E-12 100.0 8.8 173 57-242 180-356 (401)
410 3d1u_A Putative fructosamine-3 98.5 3.7E-07 1.2E-11 92.2 10.9 73 374-450 22-97 (288)
411 3tdw_A Gentamicin resistance p 98.5 8.8E-07 3E-11 90.4 13.0 135 374-522 26-225 (306)
412 4gkh_A Aminoglycoside 3'-phosp 98.5 7.9E-07 2.7E-11 89.0 11.9 133 375-520 32-222 (272)
413 1io0_A Tropomodulin; LRR prote 98.4 3.4E-08 1.2E-12 92.9 0.3 118 73-191 28-164 (185)
414 2ra8_A Uncharacterized protein 98.4 5.4E-08 1.9E-12 101.4 0.4 161 57-223 107-294 (362)
415 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.3E-06 4.5E-11 91.3 10.8 72 374-451 48-122 (362)
416 3ats_A Putative uncharacterize 98.3 9.3E-07 3.2E-11 92.4 9.3 79 374-452 27-122 (357)
417 1io0_A Tropomodulin; LRR prote 98.3 1.1E-07 3.6E-12 89.4 0.0 111 56-166 35-164 (185)
418 2q83_A YTAA protein; 2635576, 98.0 3.2E-05 1.1E-09 79.9 12.8 142 374-520 39-251 (346)
419 2olc_A MTR kinase, methylthior 98.0 2.3E-05 8E-10 83.0 11.1 73 374-448 37-120 (397)
420 3f7w_A Putative fructosamine-3 97.8 7.7E-05 2.6E-09 75.1 11.3 72 374-449 22-96 (288)
421 3jr1_A Putative fructosamine-3 97.7 0.00016 5.4E-09 73.4 11.1 139 374-517 43-232 (312)
422 2pyw_A Uncharacterized protein 97.6 0.00017 5.8E-09 76.9 10.7 71 374-447 41-122 (420)
423 3dxq_A Choline/ethanolamine ki 97.5 0.00031 1.1E-08 71.1 9.7 69 374-450 25-95 (301)
424 4gt6_A Cell surface protein; l 97.4 0.00027 9.2E-09 74.6 8.2 113 73-190 257-369 (394)
425 2ppq_A HSK, HK, homoserine kin 97.4 0.00048 1.6E-08 70.4 9.3 144 374-520 29-216 (322)
426 1nw1_A Choline kinase (49.2 KD 97.3 0.00058 2E-08 72.8 9.8 71 374-450 80-159 (429)
427 3feg_A Choline/ethanolamine ki 97.3 0.00066 2.3E-08 70.8 9.7 142 374-520 57-253 (379)
428 2qg7_A Ethanolamine kinase PV0 97.3 0.0012 4.2E-08 70.6 11.9 72 374-450 115-188 (458)
429 3csv_A Aminoglycoside phosphot 97.2 0.0015 5.1E-08 67.1 11.4 142 375-521 26-217 (333)
430 1zyl_A Hypothetical protein YI 97.2 0.0024 8E-08 65.4 12.8 142 375-520 34-222 (328)
431 3e4g_A ATP synthase subunit S, 97.2 0.00011 3.8E-09 67.2 1.7 34 82-115 62-95 (176)
432 4fs7_A Uncharacterized protein 97.2 0.00072 2.5E-08 71.3 8.3 140 59-207 232-371 (394)
433 4h09_A Hypothetical leucine ri 97.1 0.0011 3.8E-08 69.4 8.5 131 72-207 208-338 (379)
434 4h09_A Hypothetical leucine ri 97.0 0.0014 4.7E-08 68.7 9.0 126 77-207 190-315 (379)
435 3c5i_A Choline kinase; choline 97.0 0.0016 5.5E-08 67.9 9.4 72 374-450 40-121 (369)
436 4fs7_A Uncharacterized protein 97.0 0.0011 3.7E-08 69.9 7.9 139 58-206 254-392 (394)
437 3i1a_A Spectinomycin phosphotr 97.0 0.0029 1E-07 65.1 10.6 68 376-450 32-108 (339)
438 3e4g_A ATP synthase subunit S, 96.9 0.00034 1.2E-08 63.9 2.8 91 98-189 54-150 (176)
439 3rfe_A Platelet glycoprotein I 96.9 0.0016 5.5E-08 56.6 6.8 37 106-142 32-68 (130)
440 3f2s_A CK, chetk-alpha, cholin 96.9 0.0031 1.1E-07 66.0 9.7 142 375-520 60-279 (401)
441 1pgv_A TMD-1, tropomodulin TMD 96.8 0.0001 3.6E-09 68.7 -1.5 87 77-163 37-136 (197)
442 3rfe_A Platelet glycoprotein I 96.8 0.0021 7.3E-08 55.8 6.5 56 61-118 12-68 (130)
443 4gt6_A Cell surface protein; l 96.5 0.0051 1.7E-07 64.7 8.7 104 99-207 259-362 (394)
444 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00056 1.9E-08 63.8 0.4 87 55-141 39-138 (197)
445 3mes_A Choline kinase; malaria 96.3 0.0076 2.6E-07 63.7 8.1 142 374-521 77-291 (424)
446 2yle_A Protein spire homolog 1 96.2 0.039 1.3E-06 51.7 11.4 103 448-594 33-135 (229)
447 3g15_A CK, chetk-alpha, cholin 93.5 0.21 7.1E-06 52.4 9.3 29 493-521 246-280 (401)
448 4ann_A ESSB; membrane protein, 86.1 2.1 7.3E-05 39.9 7.9 84 421-520 43-127 (215)
449 2k1k_A Ephrin type-A receptor 81.8 0.66 2.3E-05 30.0 1.8 28 279-306 8-35 (38)
450 4ano_A ESSB; membrane protein, 81.7 3.1 0.00011 39.0 7.0 83 421-520 48-132 (219)
451 3cxl_A N-chimerin; SH2, RHO-GA 77.8 0.26 9E-06 52.6 -1.8 55 380-434 152-215 (463)
452 2jwa_A Receptor tyrosine-prote 40.6 17 0.0006 24.1 2.3 7 284-290 14-20 (44)
453 2lz0_A Uncharacterized protein 30.0 1.1E+02 0.0037 24.3 6.0 46 68-114 7-52 (100)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-54 Score=449.53 Aligned_cols=257 Identities=26% Similarity=0.414 Sum_probs=204.6
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+.||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++|||||+
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 126 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR 126 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence 46999999999999864 367899999988776677889999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCc---------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecC
Q 042348 447 NGSLATAIHGKAGI---------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 447 ~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
+|+|.++++..... ....+++|.++++|+.|||.||+|||+ ++||||||||+|||+++++.+||+|||
T Consensus 127 ~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp TCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred CCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEEEcccc
Confidence 99999999865321 112469999999999999999999999 899999999999999999999999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMI 596 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~ 596 (686)
+|+........ .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 204 la~~~~~~~~~---------------------~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~ 262 (329)
T 4aoj_A 204 MSRDIYSTDYY---------------------RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262 (329)
T ss_dssp -------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred cceeccCCCcc---------------------eecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCC
Confidence 99865432210 11234568889999999999999999999999999999999 899996
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.... .+.+..+..+... . .| ..+..++.+++.+||+.||++||||+||+++|+.+..
T Consensus 263 ~~~~-----~~~~~~i~~g~~~-~---~p--------~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 263 QLSN-----TEAIDCITQGREL-E---RP--------RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp SSCH-----HHHHHHHHHTCCC-C---CC--------TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCH-----HHHHHHHHcCCCC-C---Cc--------ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 5432 2223333333211 1 00 1123468899999999999999999999999998764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.2e-55 Score=446.64 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=208.6
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+.||+|+||.||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++|||||+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 98 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK 98 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCC
Confidence 46999999999999864 367899999988766667889999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCC-------ccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcc
Q 042348 447 NGSLATAIHGKAG-------IISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA 519 (686)
Q Consensus 447 ~gsL~~~l~~~~~-------~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 519 (686)
+|||.++|+.... ......++|.++++|+.|||.||+|||+ ++||||||||+|||+++++.+||+|||+|
T Consensus 99 ~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~DFGla 175 (299)
T 4asz_A 99 HGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMS 175 (299)
T ss_dssp TCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred CCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEECCcccc
Confidence 9999999986431 1112469999999999999999999999 89999999999999999999999999999
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcccc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQI 598 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~ 598 (686)
+........ .......||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 176 ~~~~~~~~~---------------------~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~ 234 (299)
T 4asz_A 176 RDVYSTDYY---------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234 (299)
T ss_dssp HHHTGGGCE---------------------EETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred eecCCCCce---------------------eecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 865432210 11123457889999999999999999999999999999999 89999654
Q ss_pred CccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 599 GSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.. .+.+..+..+..+. . | ..+..++.+++.+||+.||++|||++||++.|+++..
T Consensus 235 ~~-----~~~~~~i~~~~~~~--~--p--------~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 235 SN-----NEVIECITQGRVLQ--R--P--------RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp CH-----HHHHHHHHHTCCCC--C--C--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CH-----HHHHHHHHcCCCCC--C--C--------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 32 22333443332210 0 0 1123468899999999999999999999999998753
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.7e-54 Score=442.27 Aligned_cols=256 Identities=26% Similarity=0.374 Sum_probs=207.0
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
+.||+|+||.||+|.+. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+.+..++|||||
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~ 111 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 111 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcC
Confidence 35999999999999863 46789999997643 334578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEee
Q 042348 446 PNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISD 515 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 515 (686)
++|||.++|+..... .....++|.++++|+.|||.||+|||+ ++||||||||+|||+++++.+||+|
T Consensus 112 ~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~Ki~D 188 (308)
T 4gt4_A 112 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISD 188 (308)
T ss_dssp SSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECC
T ss_pred CCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCEEECC
Confidence 999999999764321 112469999999999999999999999 8999999999999999999999999
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCC
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLP 594 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P 594 (686)
||+|+........ .......||+.|||||++.+..|+.++|||||||++|||+| |+.|
T Consensus 189 FGlar~~~~~~~~---------------------~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~P 247 (308)
T 4gt4_A 189 LGLFREVYAADYY---------------------KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247 (308)
T ss_dssp SCCBCGGGGGGCB---------------------CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cccceeccCCCce---------------------eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCC
Confidence 9999866433210 11234568889999999999999999999999999999999 8999
Q ss_pred ccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
|..... .+.+..+..+... .. +.+++..+.+++.+||+.||++||||.||+++|+.+.
T Consensus 248 f~~~~~-----~~~~~~i~~~~~~--~~----------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 248 YCGYSN-----QDVVEMIRNRQVL--PC----------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp TTTCCH-----HHHHHHHHTTCCC--CC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCH-----HHHHHHHHcCCCC--CC----------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 965432 2223333333211 10 1123446889999999999999999999999998764
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.2e-54 Score=438.50 Aligned_cols=254 Identities=25% Similarity=0.444 Sum_probs=198.9
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||+|+||+||+|++.+ .||||+++.. .....++|.+|+++|++++|||||+++|++. .+..++|||||++|+|
T Consensus 42 ~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL 118 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSL 118 (307)
T ss_dssp EECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBH
T ss_pred eEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCCH
Confidence 469999999999998764 5999998653 3344578999999999999999999999885 4678999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.++|+... ..++|.++..|+.|||.||+|||+ ++||||||||+|||+++++.+||+|||+|+........
T Consensus 119 ~~~l~~~~-----~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-- 188 (307)
T 3omv_A 119 YKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS-- 188 (307)
T ss_dssp HHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred HHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc--
Confidence 99998654 469999999999999999999999 89999999999999999999999999999865432210
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC---CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV---RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......+||+.|||||++.+ ..|+.++|||||||++|||+||+.||.......
T Consensus 189 -------------------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~----- 244 (307)
T 3omv_A 189 -------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD----- 244 (307)
T ss_dssp ------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-----
T ss_pred -------------------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-----
Confidence 12234578999999999854 468999999999999999999999996543221
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.+..........+.. .. ....+...+.+++.+||+.||++||||.||+++|+.++.
T Consensus 245 ~~~~~~~~~~~~p~~-----~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 245 QIIFMVGRGYASPDL-----SK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp HHHHHHHTTCCCCCS-----TT--SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCCc-----cc--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 122222222111111 00 011234568899999999999999999999999988763
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.3e-53 Score=435.86 Aligned_cols=243 Identities=19% Similarity=0.324 Sum_probs=203.3
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
.||+|+||.||+|... +|+.||||++........+.+.+|+++|++++|||||+++++|.+.+..|+|||||++|+|.+
T Consensus 81 ~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~ 160 (346)
T 4fih_A 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 160 (346)
T ss_dssp EEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHH
T ss_pred EeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHH
Confidence 5999999999999975 689999999976655566789999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.. ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+....
T Consensus 161 ~l~~-------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~------ 224 (346)
T 4fih_A 161 IVTH-------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------ 224 (346)
T ss_dssp HHHH-------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS------
T ss_pred HHHc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCC------
Confidence 9975 348999999999999999999999 999999999999999999999999999998664321
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLI 612 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 612 (686)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .+.+..+
T Consensus 225 -----------------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i 282 (346)
T 4fih_A 225 -----------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKMI 282 (346)
T ss_dssp -----------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHH
T ss_pred -----------------CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHH
Confidence 122356789999999999999999999999999999999999999954322 2223333
Q ss_pred HhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 613 LEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 613 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+.... ......++.+++.+||+.||++|||+.|++++
T Consensus 283 ~~~~~~~~~~----------~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 283 RDNLPPRLKN----------LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp HHSSCCCCSC----------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HcCCCCCCCc----------cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 3332111110 01123467899999999999999999999876
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.5e-53 Score=435.71 Aligned_cols=245 Identities=20% Similarity=0.353 Sum_probs=197.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|+||.||+|+.. +++.||||++... .....+++.+|+++|++++|||||++++++.+.+..|+|||||++|+
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~ 109 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGD 109 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 36999999999999875 6899999998654 33345779999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.++|....+ ..+++.+++.|+.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+.+....
T Consensus 110 L~~~i~~~~~----~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--- 179 (350)
T 4b9d_A 110 LFKRINAQKG----VLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--- 179 (350)
T ss_dssp HHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH---
T ss_pred HHHHHHHcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCc---
Confidence 9999976543 457899999999999999999999 999999999999999999999999999998664321
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......+||+.|||||++.+..|+.++|||||||++|||+||+.||.... ..+.+
T Consensus 180 --------------------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~ 234 (350)
T 4b9d_A 180 --------------------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLV 234 (350)
T ss_dssp --------------------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHH
T ss_pred --------------------ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHH
Confidence 11234568889999999999999999999999999999999999995432 23344
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+..+..+. ... ....++.+++.+||++||++|||+.|++++
T Consensus 235 ~~i~~~~~~~---~~~---------~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 235 LKIISGSFPP---VSL---------HYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHHHTCCCC---CCT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHcCCCCC---CCc---------cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 4555443221 011 112357799999999999999999999875
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.5e-52 Score=428.77 Aligned_cols=250 Identities=21% Similarity=0.245 Sum_probs=201.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|+.. +|+.||||+++.... ..+|+.++++++|||||++++++.+.+..|+|||||++|+|.
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 138 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLG 138 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHH
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHH
Confidence 35999999999999975 589999999965422 257999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC-CeEEeecCcccccccccCCcc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM-EPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~~~~~~ 530 (686)
++++.. ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++ ++||+|||+|+.+........
T Consensus 139 ~~l~~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 139 QLIKQM------GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp HHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 999865 469999999999999999999999 9999999999999999987 699999999997654321100
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||........ ..
T Consensus 210 ------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-----~~ 266 (336)
T 4g3f_A 210 ------------------LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-----CL 266 (336)
T ss_dssp ----------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-----HH
T ss_pred ------------------eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-----HH
Confidence 0112345789999999999999999999999999999999999999965443332 23
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
.+.....+..++ .+ .....+.+++.+||++||++|||+.|++++|....
T Consensus 267 ~i~~~~~~~~~~-~~---------~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 267 KIASEPPPIREI-PP---------SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp HHHHSCCGGGGS-CT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHcCCCCchhc-Cc---------cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 333333222211 11 12245778999999999999999999999987754
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-52 Score=429.75 Aligned_cols=264 Identities=23% Similarity=0.252 Sum_probs=198.1
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecC----ceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD----EKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~lV~e~~~~g 448 (686)
+.||+|+||+||+|++. |+.||||++...... ...++.|+..+.+++|||||+++++|.+.+ ..++|||||++|
T Consensus 9 ~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g 86 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86 (303)
T ss_dssp EEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred EEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence 46999999999999984 789999999754322 123445667778899999999999998764 469999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC-----CCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS-----PKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
+|.++++.. .++|..+.+|+.|++.||+|||+.. .++||||||||+|||+++++++||+|||+|+...
T Consensus 87 sL~~~l~~~-------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 87 SLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp BHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred cHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 999999753 5899999999999999999999831 1389999999999999999999999999998765
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC------CCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR------KPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
...... .......+||+.|||||++.+. .++.++|||||||++|||+||+.||..
T Consensus 160 ~~~~~~-------------------~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 160 SATDTI-------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp TTTTEE-------------------SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred CCCCce-------------------eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 322110 0112345789999999998754 367899999999999999999887633
Q ss_pred cCcc----------chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 598 IGSM----------ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 598 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
.... ..........+... ..+|.+.......+....+.+++.+||+.||++||||.||++.|++
T Consensus 221 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~------~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 221 HEDYQLPYYDLVPSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccccchhcccccchHHHHHHHHhcc------cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 2211 11122222222211 1222222222233566788999999999999999999999999998
Q ss_pred ccc
Q 042348 668 VNI 670 (686)
Q Consensus 668 i~~ 670 (686)
+..
T Consensus 295 l~~ 297 (303)
T 3hmm_A 295 LSQ 297 (303)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.1e-52 Score=423.79 Aligned_cols=242 Identities=19% Similarity=0.274 Sum_probs=203.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||+||+|+.. +++.||||++... .....+.+.+|+++|++++|||||++++++.+.+..|+|||||++|
T Consensus 38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG 117 (311)
T 4aw0_A 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117 (311)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 46999999999999875 6889999999653 2234567999999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+......
T Consensus 118 ~L~~~i~~~------~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 118 ELLKYIRKI------GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp EHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 999999865 469999999999999999999999 99999999999999999999999999999876432210
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.... ..+.
T Consensus 189 ---------------------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~ 242 (311)
T 4aw0_A 189 ---------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----EGLI 242 (311)
T ss_dssp ---------------------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHH
T ss_pred ---------------------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHH
Confidence 12335678999999999999999999999999999999999999995432 2333
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC 662 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 662 (686)
+..+......+++.+ ..++.+++.+||++||++|||++|+.
T Consensus 243 ~~~i~~~~~~~p~~~-------------s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 243 FAKIIKLEYDFPEKF-------------FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHTCCCCCTTC-------------CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHcCCCCCCccc-------------CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 455555543332211 12577899999999999999999864
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-51 Score=418.23 Aligned_cols=241 Identities=24% Similarity=0.375 Sum_probs=193.0
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEe----cCceeEEEeccC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS----VDEKLLIYDYIP 446 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lV~e~~~ 446 (686)
.||+|+||.||+|... ++..||||++... .....++|.+|+++|++++|||||+++++|.+ .+..++|||||+
T Consensus 33 ~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~ 112 (290)
T 3fpq_A 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMT 112 (290)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCC
Confidence 5999999999999875 5789999998653 33345679999999999999999999999875 345799999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC--ceecCCCCCCeeec-CCCCeEEeecCcccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR--YVHGDLRPSNILLG-KNMEPHISDFGLARLAD 523 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~ 523 (686)
+|+|.++++.. ..+++..+..|+.||+.||+|||+ ++ ||||||||+|||++ .++.+||+|||+|+...
T Consensus 113 gg~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 113 SGTLKTYLKRF------KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp SCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred CCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999864 469999999999999999999999 66 99999999999998 47999999999997532
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.. .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.....
T Consensus 184 ~~-------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~--- 234 (290)
T 3fpq_A 184 AS-------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--- 234 (290)
T ss_dssp TT-------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS---
T ss_pred CC-------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc---
Confidence 11 1224578899999998865 699999999999999999999999954322
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.......+.....+ ..+++ . ...++.+++.+||+.||++|||++|+++|
T Consensus 235 -~~~~~~~i~~~~~~--~~~~~----~-----~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 235 -AAQIYRRVTSGVKP--ASFDK----V-----AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -HHHHHHHHTTTCCC--GGGGG----C-----CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -HHHHHHHHHcCCCC--CCCCc----c-----CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 12222232222111 11111 1 12357789999999999999999999864
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-51 Score=436.89 Aligned_cols=244 Identities=20% Similarity=0.332 Sum_probs=203.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... +|+.||||++........+.+.+|+.+|++++|||||+++++|.+.+..|+|||||++|+|.
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~ 236 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHH
Confidence 35999999999999975 58999999997766666678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++... .+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+....
T Consensus 237 ~~i~~~-------~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~----- 301 (423)
T 4fie_A 237 DIVTHT-------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 301 (423)
T ss_dssp HHHHHS-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-----
T ss_pred HHHhcc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-----
Confidence 999743 48999999999999999999999 999999999999999999999999999998664321
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .+.+..
T Consensus 302 ------------------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~ 358 (423)
T 4fie_A 302 ------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKM 358 (423)
T ss_dssp ------------------CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHH
T ss_pred ------------------ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHH
Confidence 112346789999999999999999999999999999999999999954322 222333
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+.....+..... .....++.+++.+||+.||++|||+.|+++|
T Consensus 359 i~~~~~~~~~~~----------~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 359 IRDNLPPRLKNL----------HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HHHSCCCCCSCT----------TSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHcCCCCCCccc----------ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 333322111100 0112357789999999999999999999886
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.3e-51 Score=412.76 Aligned_cols=240 Identities=23% Similarity=0.348 Sum_probs=188.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||+||+|... +++.||||++.... ....+.+.+|+++|++++|||||++++++.+.+..++||||| +|
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g 97 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CC
Confidence 46999999999999865 68999999986532 233467999999999999999999999999999999999999 68
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+......
T Consensus 98 ~L~~~l~~~------~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-- 166 (275)
T 3hyh_A 98 ELFDYIVQR------DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp EHHHHHHHS------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC--
Confidence 999999765 469999999999999999999999 999999999999999999999999999998654221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.....+||+.|||||++.+..| +.++||||+||++|||+||+.||... +...
T Consensus 167 ----------------------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~ 219 (275)
T 3hyh_A 167 ----------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPV 219 (275)
T ss_dssp ------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHH
T ss_pred ----------------------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHH
Confidence 1224578899999999988776 58999999999999999999999543 2233
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+.+.......++.+ ..++.+++.+||+.||++|||++|++++
T Consensus 220 ~~~~i~~~~~~~p~~~-------------s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 220 LFKNISNGVYTLPKFL-------------SPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHHHTCCCCCTTS-------------CHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHcCCCCCCCCC-------------CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 4445544443332221 2357789999999999999999999874
No 13
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.1e-52 Score=422.72 Aligned_cols=261 Identities=23% Similarity=0.340 Sum_probs=202.2
Q ss_pred cccCccCceEEEEEEeC----CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN----NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+.||+|+||+||+|+.. +++.||||.++... .....++.+|+++|++++|||||++++++.+.+..|+|||||+
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~ 109 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLR 109 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCT
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCC
Confidence 46999999999999863 46789999997542 2234568899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++... ..+++.++..++.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+......
T Consensus 110 gg~L~~~l~~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 110 GGDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp TCEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred CCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 99999999865 469999999999999999999999 999999999999999999999999999998543221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.... ..
T Consensus 181 -----------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~ 232 (304)
T 3ubd_A 181 -----------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-----RK 232 (304)
T ss_dssp -----------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HH
T ss_pred -----------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-----HH
Confidence 11234678999999999999999999999999999999999999995432 23
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH--Hhcccccchhhhhcc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM-----RHVCDS--LDRVNISTEQQFMKG 679 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~~~--L~~i~~~~~~~~~~~ 679 (686)
+.+..+.....+.++.+ ..++.+++.+||++||++|||+ +|+++| ++.+ .++.-..+.
T Consensus 233 ~~~~~i~~~~~~~p~~~-------------s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i--dw~~l~~~~ 297 (304)
T 3ubd_A 233 ETMTMILKAKLGMPQFL-------------SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI--DWNKLYRRE 297 (304)
T ss_dssp HHHHHHHHCCCCCCTTS-------------CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC--CHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCcC-------------CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC--CHHHHHhCC
Confidence 33445555443332221 2357789999999999999985 566654 3333 233334445
Q ss_pred CCCCCC
Q 042348 680 EEPKFD 685 (686)
Q Consensus 680 ~~~~~~ 685 (686)
-.|+|.
T Consensus 298 ~~pP~~ 303 (304)
T 3ubd_A 298 IHPPFK 303 (304)
T ss_dssp SCCSSC
T ss_pred CCcCcC
Confidence 567763
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.3e-52 Score=432.22 Aligned_cols=259 Identities=26% Similarity=0.352 Sum_probs=204.8
Q ss_pred hcccCccCceEEEEEEeCC------CceEEEEEcCCCCc-cchHHHHHHHHHHhccCC-CCcceeeEEEEec-CceeEEE
Q 042348 372 AFLLGKSTIGIVYKVALNN------EEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRH-PNIVSLRAYFWSV-DEKLLIY 442 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~-~~~~lV~ 442 (686)
.+.||+|+||.||+|.+.. ++.||||++..... ...++|.+|+++|++++| ||||+++|+|... +..++||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 3569999999999998643 35799999976533 345679999999999965 9999999999765 5689999
Q ss_pred eccCCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeE
Q 042348 443 DYIPNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 512 (686)
|||++|+|.++|+..... .....++|.++..|+.|||.||+|||+ ++||||||||+|||+++++.+|
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccceeeCCCCCEE
Confidence 999999999999864321 012458999999999999999999999 8999999999999999999999
Q ss_pred EeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-C
Q 042348 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591 (686)
Q Consensus 513 l~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G 591 (686)
|+|||+|+.+..... ........||+.|||||++.+..|+.++|||||||++|||+| |
T Consensus 226 i~DFGlar~~~~~~~---------------------~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G 284 (353)
T 4ase_A 226 ICDFGLARDIYKDPD---------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 284 (353)
T ss_dssp ECCCGGGSCTTTCTT---------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred ECcchhhhhcccCCC---------------------ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCC
Confidence 999999986543221 012234567889999999999999999999999999999998 9
Q ss_pred CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 592 KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 592 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+.||......+ .+...+....... . | ..+..++.+++.+||+.||++|||+.||+++|+++..
T Consensus 285 ~~Pf~~~~~~~-----~~~~~i~~g~~~~-~--p--------~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 285 ASPYPGVKIDE-----EFCRRLKEGTRMR-A--P--------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp CCSSTTCCCSH-----HHHHHHHHTCCCC-C--C--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHH-----HHHHHHHcCCCCC-C--C--------ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 99996543322 1222222221111 0 0 1123467899999999999999999999999998754
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.3e-49 Score=404.44 Aligned_cols=260 Identities=23% Similarity=0.364 Sum_probs=187.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCc------------e
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE------------K 438 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------------~ 438 (686)
+.||+|+||+||+|+.. +++.||||+++... ....+++.+|+++|++++|||||++++++.+.+. .
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l 90 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYL 90 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEE
Confidence 46999999999999875 68899999986543 2345679999999999999999999999976543 6
Q ss_pred eEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCc
Q 042348 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518 (686)
Q Consensus 439 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 518 (686)
|+|||||++|+|.+++...... ...++..++.|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+
T Consensus 91 ~ivmE~~~gg~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 91 YIQMQLCRKENLKDWMNGRCTI---EERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp EEEEECCCSCCHHHHHHTCCSG---GGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred EEEEecCCCCcHHHHHHhcCCC---ChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccCcc
Confidence 8999999999999999876432 345677789999999999999999 9999999999999999999999999999
Q ss_pred ccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCcccc
Q 042348 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQI 598 (686)
Q Consensus 519 a~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~ 598 (686)
|+.+.......... ++ .......+..+||+.|||||++.+..|+.++|||||||++|||++ ||...
T Consensus 165 a~~~~~~~~~~~~~-------~~----~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~ 230 (299)
T 4g31_A 165 VTAMDQDEEEQTVL-------TP----MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ 230 (299)
T ss_dssp C-------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred ceecCCCccccccc-------cc----cccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc
Confidence 99776433211100 00 001122345679999999999999999999999999999999996 77321
Q ss_pred CccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hhcc
Q 042348 599 GSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS--LDRV 668 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~i 668 (686)
.+....+..+.... .+.. .........+++.+||+.||++|||+.|++++ ++++
T Consensus 231 ----~~~~~~~~~~~~~~--~p~~----------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 231 ----MERVRTLTDVRNLK--FPPL----------FTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp ----HHHHHHHHHHHTTC--CCHH----------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred ----cHHHHHHHHHhcCC--CCCC----------CcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 11222222222211 1111 11223346689999999999999999999874 4444
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.6e-47 Score=401.25 Aligned_cols=259 Identities=21% Similarity=0.332 Sum_probs=195.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEec------CceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV------DEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lV~e 443 (686)
..||+|+||.||+|... +|+.||||+++... ....+.+.+|+++|++++|||||++++++... +..|+|||
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE 139 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD 139 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEe
Confidence 46999999999999875 68999999997542 23456788999999999999999999998643 56799999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
||+ |+|.+++... ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+.
T Consensus 140 ~~~-g~L~~~i~~~------~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 140 LME-SDLHQIIHSS------QPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp CCS-EEHHHHHTSS------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred CCC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 995 7899999765 469999999999999999999999 999999999999999999999999999998664
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
...... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.... .
T Consensus 210 ~~~~~~-------------------~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~--~ 268 (398)
T 4b99_A 210 TSPAEH-------------------QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--Y 268 (398)
T ss_dssp -------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS--H
T ss_pred cCcccc-------------------ccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC--H
Confidence 321100 0123456889999999998775 56999999999999999999999995432 2
Q ss_pred hhHHHHHHHHHhhcCCcccccCcc-----------ccc-CCCc-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPF-----------LAH-DLDK-----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~-----------l~~-~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+....+...... +........ +.. .... +....++.+|+.+||+.||++|||+.|+++|
T Consensus 269 ~~~l~~I~~~~g~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 269 VHQLQLIMMVLGT--PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp HHHHHHHHHHHCC--CCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHHhcCC--CChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 2222222222111 111100000 000 0000 0112357899999999999999999999886
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.3e-46 Score=393.86 Aligned_cols=213 Identities=20% Similarity=0.304 Sum_probs=165.0
Q ss_pred cccCccCceEEEEEEeC----CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN----NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
+.||+|+||+||+|+.+ +++.||||++.... ...++.+|+++|+++ +|||||++++++.+.+..++|||||++
T Consensus 27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 46999999999999753 46789999986643 345788999999998 699999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-CCeEEeecCccccccccc
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-MEPHISDFGLARLADIAE 526 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~~~~~~ 526 (686)
|+|.+++. .+++.++..++.|++.||+|||+ ++||||||||+|||++.+ +.+||+|||+|+......
T Consensus 105 ~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 105 ESFLDILN---------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp CCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred ccHHHHHc---------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 99999983 48999999999999999999999 999999999999999876 799999999998664322
Q ss_pred CCccccccccc----c-CCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 527 ETPEVHWEQST----T-GTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 527 ~~~~~~~~~~~----~-g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
........... . ..............+..+||+.|+|||++.+. .|+.++||||+||++|||+||+.||....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 11000000000 0 00000000011223456899999999998775 58999999999999999999999996543
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.2e-45 Score=408.22 Aligned_cols=243 Identities=21% Similarity=0.251 Sum_probs=195.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHH---HHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEF---QTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~---~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
.+||+|+||.||+|+.. +|+.||||++.+... .....+ ..++.+++.++|||||+++++|.+.+..|+|||||
T Consensus 195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~ 274 (689)
T 3v5w_A 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 274 (689)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecC
Confidence 46999999999999876 589999999864311 112223 34467778889999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
+||+|.++|... ..+++..+..|+.||+.||+|||+ ++||||||||+|||++.+|++||+|||+|+.+...
T Consensus 275 ~GGdL~~~l~~~------~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 275 NGGDLHYHLSQH------GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp CSCBHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 999999999865 469999999999999999999999 99999999999999999999999999999865321
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.....+||+.|||||++.. ..|+.++||||+||++|||++|+.||......+
T Consensus 346 -------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-- 398 (689)
T 3v5w_A 346 -------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-- 398 (689)
T ss_dssp -------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--
T ss_pred -------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--
Confidence 1234578999999999964 579999999999999999999999996543322
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~ 664 (686)
.......+.......+..+ ..++.+++.+||++||++|++ +.||.+|
T Consensus 399 ~~~i~~~i~~~~~~~p~~~-------------S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 399 KHEIDRMTLTMAVELPDSF-------------SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHHHHHHHHCCCCCCTTS-------------CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred HHHHHHhhcCCCCCCCccC-------------CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 2233344444433322221 235779999999999999998 6788766
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.9e-45 Score=410.21 Aligned_cols=246 Identities=22% Similarity=0.344 Sum_probs=204.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
+.||+|+||.||+|... +|+.||+|.+........+.+.+|+++|++++|||||+++++|.+.+..++|||||++|+|.
T Consensus 163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~ 242 (573)
T 3uto_A 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF 242 (573)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHH
Confidence 46999999999999875 68999999997766666678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC--CCeEEeecCcccccccccCCc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN--MEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~--~~~kl~DfGla~~~~~~~~~~ 529 (686)
+++.... ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 243 ~~i~~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~--- 311 (573)
T 3uto_A 243 EKVADEH-----NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--- 311 (573)
T ss_dssp HHHTCTT-----SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS---
T ss_pred HHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC---
Confidence 9997654 358999999999999999999999 999999999999999854 899999999998764321
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+.+
T Consensus 312 ---------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-----~~~~ 365 (573)
T 3uto_A 312 ---------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-----DETL 365 (573)
T ss_dssp ---------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHH
T ss_pred ---------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHH
Confidence 12235688899999999999999999999999999999999999954332 2233
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+........... . .. ...++.+|+.+||+.||++|||+.|+++|
T Consensus 366 ~~i~~~~~~~~~~~---~-~~-----~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 366 RNVKSCDWNMDDSA---F-SG-----ISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp HHHHTTCCCCCSGG---G-TT-----SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHhCCCCCCccc---c-cC-----CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 44444332221111 1 11 12357789999999999999999999986
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3e-44 Score=374.77 Aligned_cols=271 Identities=31% Similarity=0.525 Sum_probs=220.8
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|...+++.||||++........+.+.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 45 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 124 (321)
T 2qkw_B 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124 (321)
T ss_dssp CCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGG
T ss_pred ceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHH
Confidence 46999999999999988899999999987666667889999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++...... ...+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 125 ~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---- 195 (321)
T 2qkw_B 125 HLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT---- 195 (321)
T ss_dssp GSSSSCCC--SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC----
T ss_pred HHhccCCC--ccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccccccccccccc----
Confidence 99765321 1458999999999999999999999 89999999999999999999999999999754321110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc-hhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME-LNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~-~~~~~~~~~ 611 (686)
.......||..|+|||++.+..++.++|||||||++|||+||+.||......+ .....|...
T Consensus 196 -----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~ 258 (321)
T 2qkw_B 196 -----------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258 (321)
T ss_dssp -----------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHH
T ss_pred -----------------ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhh
Confidence 01123456788999999988889999999999999999999999996544322 234444433
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
... .......+++.+.... ..+....+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 259 ~~~-~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 259 SHN-NGQLEQIVDPNLADKI-RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHT-TTCCCSSSSSSCTTCS-CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccc-cccHHHhcChhhcccc-CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 322 2334445555443322 356778899999999999999999999999999987543
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1e-43 Score=371.60 Aligned_cols=271 Identities=32% Similarity=0.575 Sum_probs=216.2
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCc-cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|...+++.||||++..... .....+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 36 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 115 (326)
T 3uim_A 36 NILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115 (326)
T ss_dssp TEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHH
T ss_pred eeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHH
Confidence 47999999999999988899999999976432 22347899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++...... ...+++..+..|+.|++.||+|||+.+..+|+||||||+|||++.++.+||+|||+++.......
T Consensus 116 ~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---- 189 (326)
T 3uim_A 116 SCLRERPES--QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT---- 189 (326)
T ss_dssp HHHHCCSTT--CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSS----
T ss_pred HHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccc----
Confidence 999876432 14599999999999999999999992212999999999999999999999999999986542221
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCcccc---CccchhHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQI---GSMELNIVQW 608 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~---~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||+||+.||... .........|
T Consensus 190 ------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 251 (326)
T 3uim_A 190 ------------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251 (326)
T ss_dssp ------------------CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHH
T ss_pred ------------------cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHH
Confidence 1122345788999999998888999999999999999999999999421 1223334444
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
+...... .......+..+.... .......+.+++.+||+.||++|||+.||+++|+...
T Consensus 252 ~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 252 VKGLLKE-KKLEALVDVDLQGNY-KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HTTTTSS-CCSTTSSCTTCTTSC-CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHHhhc-hhhhhhcChhhcccc-CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 4333322 233444444443332 3567788999999999999999999999999998754
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=366.32 Aligned_cols=267 Identities=24% Similarity=0.382 Sum_probs=207.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR 95 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHH
Confidence 46999999999999975 58899999987766666788999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..+++.++..|+.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...........
T Consensus 96 ~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 96 GIIKSMD-----SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp HHHHHCC-----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 9998754 468999999999999999999999 89999999999999999999999999999876533221100
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
.. .. ............||..|+|||++.+..++.++|||||||++|||++|..||................
T Consensus 168 ~~---~~------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~ 238 (310)
T 3s95_A 168 LR---SL------KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG 238 (310)
T ss_dssp ---------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH
T ss_pred cc---cc------cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc
Confidence 00 00 0000011224578999999999999999999999999999999999999985543322211111111
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
...... +. .....+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 239 ~~~~~~--~~-------------~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 239 FLDRYC--PP-------------NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHHHTC--CT-------------TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccccC--CC-------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111110 00 1112477899999999999999999999999988643
No 23
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.7e-43 Score=365.25 Aligned_cols=241 Identities=21% Similarity=0.327 Sum_probs=200.4
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~ 100 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCB
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCc
Confidence 4699999999999997 57899999998654 23345678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 101 L~~~l~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 168 (328)
T 3fe3_A 101 VFDYLVAH------GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG--- 168 (328)
T ss_dssp HHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC---
T ss_pred HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC---
Confidence 99999765 358999999999999999999999 899999999999999999999999999997553221
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCC-CcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPT-QKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||+.|+|||++.+..++ .++|||||||++|||++|+.||.... ....
T Consensus 169 ---------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~ 222 (328)
T 3fe3_A 169 ---------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKEL 222 (328)
T ss_dssp ---------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHH
T ss_pred ---------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHH
Confidence 12345678899999999887765 79999999999999999999995432 2333
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+..+....+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 223 ~~~i~~~~~~~p~~-------------~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 223 RERVLRGKYRIPFY-------------MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHHCCCCCCTT-------------SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHhCCCCCCCC-------------CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 44444443332221 12357789999999999999999999876
No 24
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.6e-42 Score=362.82 Aligned_cols=243 Identities=22% Similarity=0.321 Sum_probs=200.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|+.. +++.||+|.+... .......+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg 90 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 46999999999999876 5889999998653 2234567889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 91 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 159 (337)
T 1o6l_A 91 ELFFHLSRE------RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-- 159 (337)
T ss_dssp BHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC--
Confidence 999999754 358999999999999999999999 899999999999999999999999999997532111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 160 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~ 213 (337)
T 1o6l_A 160 ---------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERL 213 (337)
T ss_dssp ---------------------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH
T ss_pred ---------------------CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----HHH
Confidence 112245678899999999999999999999999999999999999954322 223
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDSL 665 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~L 665 (686)
...+.......+.. ...++.+++.+||+.||++|| ++.||+++-
T Consensus 214 ~~~i~~~~~~~p~~-------------~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 214 FELILMEEIRFPRT-------------LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HHHHHHCCCCCCTT-------------SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HHHHHcCCCCCCCC-------------CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 33444333222211 123577899999999999999 899998873
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=7.8e-43 Score=359.67 Aligned_cols=244 Identities=22% Similarity=0.371 Sum_probs=200.5
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHH
Confidence 3699999999999986 468899999987655555678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++... .+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 106 ~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---- 171 (297)
T 3fxz_A 106 DVVTET-------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---- 171 (297)
T ss_dssp HHHHHS-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC----
T ss_pred HHHhhc-------CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc----
Confidence 999753 48999999999999999999999 8999999999999999999999999999976542211
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||...... .....
T Consensus 172 -------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~ 227 (297)
T 3fxz_A 172 -------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-----RALYL 227 (297)
T ss_dssp -------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH
T ss_pred -------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH
Confidence 122346788899999999999999999999999999999999999543221 11222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+.. .. .......+.+++.+||+.||++|||+.|++++
T Consensus 228 ~~~~~~~~~--~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 228 IATNGTPEL--QN--------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHHCSCCC--SC--------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHhCCCCCC--CC--------ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 222221111 01 11123457799999999999999999999875
No 26
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6e-43 Score=367.18 Aligned_cols=243 Identities=22% Similarity=0.375 Sum_probs=193.9
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 16 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L 95 (347)
T 3zgw_A 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL 95 (347)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred EEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCH
Confidence 4699999999999986 468899999986543 23346789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||++........
T Consensus 96 ~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~--- 163 (347)
T 3zgw_A 96 FDYIISQ------DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD--- 163 (347)
T ss_dssp HHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC---
Confidence 9999764 358999999999999999999999 8999999999999999999999999999875432211
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||... +.....
T Consensus 164 -------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~-----~~~~~~ 219 (347)
T 3zgw_A 164 -------------------YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD-----NVMALY 219 (347)
T ss_dssp ---------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHH
T ss_pred -------------------ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-----CHHHHH
Confidence 11234567889999999988775 89999999999999999999999543 223334
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+..+....+..+ ...+.+++.+||+.||++|||+.|++++
T Consensus 220 ~~i~~~~~~~p~~~-------------s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 220 KKIMRGKYDVPKWL-------------SPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp HHHHHTCCCCCTTC-------------CHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHcCCCCCCCCC-------------CHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 44444443332221 1246789999999999999999999976
No 27
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-43 Score=369.65 Aligned_cols=259 Identities=22% Similarity=0.319 Sum_probs=201.6
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCc----eeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE----KLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~lV~e~~~~g 448 (686)
..||+|+||.||+|+.. ++.||||++..... ....+..|+.++++++|||||++++++..... .++||||+++|
T Consensus 30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g 107 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKG 107 (322)
T ss_dssp EEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred heecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCC
Confidence 46999999999999876 78999999975432 23456779999999999999999999987654 59999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC----------CceecCCCCCCeeecCCCCeEEeecCc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK----------RYVHGDLRPSNILLGKNMEPHISDFGL 518 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~----------~iiHrDlkp~NILl~~~~~~kl~DfGl 518 (686)
+|.++++.. .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~L~~~l~~~-------~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 108 SLSDFLKAN-------VVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp BHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 999999753 48999999999999999999999 7 999999999999999999999999999
Q ss_pred ccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-----CCCCcchHHHHHHHHHHHHhCCC
Q 042348 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-----KPTQKWDIYSYGVILLEMISGKL 593 (686)
Q Consensus 519 a~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwSlGvvl~elltG~~ 593 (686)
++........ .......||..|+|||++.+. .++.++|||||||++|||+||+.
T Consensus 178 a~~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~ 236 (322)
T 3soc_A 178 ALKFEAGKSA---------------------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCT 236 (322)
T ss_dssp CEEECTTSCC---------------------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBT
T ss_pred ccccccccCc---------------------cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCC
Confidence 9866432211 112235678899999998763 45678899999999999999999
Q ss_pred CccccCccch-----------hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 042348 594 PMIQIGSMEL-----------NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC 662 (686)
Q Consensus 594 P~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 662 (686)
||........ ....+..... ... ..+.+............+.+++.+||+.||++|||+.||+
T Consensus 237 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 310 (322)
T 3soc_A 237 AADGPVDEYMLPFEEEIGQHPSLEDMQEVVV-HKK-----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310 (322)
T ss_dssp TSSSCCCCCCCTTHHHHCSSCCHHHHHHHHT-TSC-----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCCcchhccchhhhhccCCchhhhhhhhh-ccc-----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9965332211 1111111111 111 1111111122234566799999999999999999999999
Q ss_pred HHHhcccc
Q 042348 663 DSLDRVNI 670 (686)
Q Consensus 663 ~~L~~i~~ 670 (686)
+.|+++..
T Consensus 311 ~~L~~l~~ 318 (322)
T 3soc_A 311 ERITQMQR 318 (322)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
No 28
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.6e-42 Score=359.79 Aligned_cols=245 Identities=20% Similarity=0.328 Sum_probs=201.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 130 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHH
Confidence 36999999999999976 68999999997766666678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 131 ~~l~~-------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---- 196 (321)
T 2c30_A 131 DIVSQ-------VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP---- 196 (321)
T ss_dssp HHHTT-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC----
T ss_pred HHHHh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc----
Confidence 99864 358999999999999999999999 8999999999999999999999999999976542211
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 197 -------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-----~~~~~~ 252 (321)
T 2c30_A 197 -------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-----VQAMKR 252 (321)
T ss_dssp -------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHH
T ss_pred -------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH
Confidence 11234678889999999988999999999999999999999999954322 122222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
+.....+. ... .......+.+++.+||+.||++|||+.|++++-
T Consensus 253 ~~~~~~~~--~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 253 LRDSPPPK--LKN--------SHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp HHHSSCCC--CTT--------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HhcCCCCC--cCc--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 22221111 000 011223577899999999999999999999863
No 29
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.8e-42 Score=355.74 Aligned_cols=279 Identities=32% Similarity=0.526 Sum_probs=218.5
Q ss_pred cccCHHHHHHHhh-----------cccCccCceEEEEEEeCCCceEEEEEcCCCC----ccchHHHHHHHHHHhccCCCC
Q 042348 360 VDFDLEQLLKASA-----------FLLGKSTIGIVYKVALNNEEAVAVRRLGNGG----WQRFKEFQTEAEAIGKIRHPN 424 (686)
Q Consensus 360 ~~~~~~~l~~~~~-----------~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~n 424 (686)
..|++.++.+++. +.||+|+||.||+|.. +++.||||++.... ....+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 3455666665542 4699999999999987 57889999986532 233567999999999999999
Q ss_pred cceeeEEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCee
Q 042348 425 IVSLRAYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNIL 504 (686)
Q Consensus 425 Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NIL 504 (686)
|+++++++.+.+..++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+ ++|+||||||+||+
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil 165 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANIL 165 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGC---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEE
Confidence 999999999999999999999999999999754321 468999999999999999999999 89999999999999
Q ss_pred ecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHH
Q 042348 505 LGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVI 584 (686)
Q Consensus 505 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvv 584 (686)
++.++.+||+|||+++........ .......||..|+|||.+.+ .++.++||||||++
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~---------------------~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~i 223 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQT---------------------VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVV 223 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSC---------------------EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHH
T ss_pred EcCCCcEEEeeccccccccccccc---------------------ccccccCCCcCcCChHHhcC-CCCccchhHHHHHH
Confidence 999999999999999765422110 11223467888999998865 57999999999999
Q ss_pred HHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 585 LLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 585 l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+|||++|+.||....... ....+..........+.+.+++.+.. ........+.+++.+||+.||++|||+.||+++
T Consensus 224 l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 224 LLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDKKMND--ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp HHHHHHCCCSBCTTBSSS-BTTHHHHHHHTTSCCHHHHSCSSCSC--CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHCCCCcccCcchH-HHHHHHHHhhhhhhhhhhhccccccc--cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999996543322 22233333333333334444443321 234566789999999999999999999999999
Q ss_pred Hhcccc
Q 042348 665 LDRVNI 670 (686)
Q Consensus 665 L~~i~~ 670 (686)
|+++..
T Consensus 301 L~~l~~ 306 (307)
T 2nru_A 301 LQEMTA 306 (307)
T ss_dssp HHHHC-
T ss_pred HHHHhc
Confidence 999864
No 30
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-42 Score=360.06 Aligned_cols=253 Identities=28% Similarity=0.407 Sum_probs=196.2
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|+. +++.||||++.... ....+++.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 43 ~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 121 (309)
T 3p86_A 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121 (309)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBH
T ss_pred eEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcH
Confidence 4699999999999987 47889999987643 23346789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC--ceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR--YVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
.+++...... ..+++..++.++.|++.||+|||+ ++ |+||||||+||+++.++.+||+|||+++......
T Consensus 122 ~~~l~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~-- 193 (309)
T 3p86_A 122 YRLLHKSGAR---EQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF-- 193 (309)
T ss_dssp HHHHHSTTHH---HHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred HHHHhhcCCC---CCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc--
Confidence 9999865321 248999999999999999999999 78 9999999999999999999999999997543211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||.+.+..++.++|||||||++|||++|+.||...... +.
T Consensus 194 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~ 247 (309)
T 3p86_A 194 ---------------------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QV 247 (309)
T ss_dssp -----------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HH
T ss_pred ---------------------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HH
Confidence 1112345788899999999999999999999999999999999999543322 11
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
.......... ... .. .....+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 248 ~~~~~~~~~~-~~~-----~~-----~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 248 VAAVGFKCKR-LEI-----PR-----NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHSCCC-CCC-----CT-----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHhcCCC-CCC-----Cc-----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 2222111111 110 01 1223578999999999999999999999999987643
No 31
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.5e-42 Score=368.72 Aligned_cols=257 Identities=25% Similarity=0.391 Sum_probs=204.6
Q ss_pred cccCccCceEEEEEEeC--------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEE
Q 042348 373 FLLGKSTIGIVYKVALN--------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 442 (686)
..||+|+||.||+|... ++..||||.++... ....+++.+|+++++++ +||||+++++++...+..++||
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~ 166 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 166 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEE
Confidence 46999999999999852 34579999997653 33456799999999999 8999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeE
Q 042348 443 DYIPNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 512 (686)
||+++|+|.+++...... .....+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++.+|
T Consensus 167 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~k 243 (370)
T 2psq_A 167 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMK 243 (370)
T ss_dssp ECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEE
T ss_pred EcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEECCCCCEE
Confidence 999999999999865321 112358999999999999999999999 8999999999999999999999
Q ss_pred EeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-C
Q 042348 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591 (686)
Q Consensus 513 l~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G 591 (686)
|+|||+++........ .......+|..|+|||++.+..++.++|||||||++|||+| |
T Consensus 244 l~DFG~a~~~~~~~~~---------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g 302 (370)
T 2psq_A 244 IADFGLARDINNIDYY---------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302 (370)
T ss_dssp ECCCSSCEETTCCCTT---------------------CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred EccccCCcccCcccce---------------------ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 9999999865422110 11123445778999999999999999999999999999999 9
Q ss_pred CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 592 KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 592 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+.||......+ + ...+...... . . .......+.+++.+||+.||++||++.|+++.|+++..
T Consensus 303 ~~p~~~~~~~~--~---~~~~~~~~~~--~-----~-----~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 303 GSPYPGIPVEE--L---FKLLKEGHRM--D-----K-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp CCSSTTCCGGG--H---HHHHHTTCCC--C-----C-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHH--H---HHHHhcCCCC--C-----C-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 99996543222 1 2222222111 0 0 01123468899999999999999999999999999763
No 32
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-42 Score=351.66 Aligned_cols=250 Identities=24% Similarity=0.402 Sum_probs=205.7
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||+++|+|.+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred heecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHH
Confidence 36999999999999998888999999976543 34679999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 95 ~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 161 (269)
T 4hcu_A 95 YLRTQR-----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY----- 161 (269)
T ss_dssp HHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-----
T ss_pred HHHhcC-----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccc-----
Confidence 997654 458999999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......+|..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....
T Consensus 162 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~ 219 (269)
T 4hcu_A 162 -----------------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED 219 (269)
T ss_dssp -----------------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH
T ss_pred -----------------ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHH
Confidence 11123445677999999988899999999999999999999 99999543321 22233
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+....... .+ ......+.+++.+||+.||++|||+.|++++|+++..
T Consensus 220 ~~~~~~~~----~~--------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 220 ISTGFRLY----KP--------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHTTCCCC----CC--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCccCC----CC--------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 32221111 11 0112357889999999999999999999999998864
No 33
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=362.07 Aligned_cols=256 Identities=26% Similarity=0.442 Sum_probs=204.2
Q ss_pred cccCccCceEEEEEEeC----CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN----NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... .+..||||++... .....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMEN 134 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTT
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCC
Confidence 46999999999999974 3456999999765 334456799999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.++++... ..+++.++..|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 135 ~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 135 GSLDTFLRTHD-----GQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp CBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred CcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 99999997654 358999999999999999999999 8999999999999999999999999999987643221
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~ 606 (686)
.. .......+|..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 207 ~~--------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----- 261 (325)
T 3kul_A 207 AA--------------------YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR----- 261 (325)
T ss_dssp CC--------------------EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----
T ss_pred ce--------------------eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----
Confidence 10 11123345778999999988889999999999999999999 99999544322
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
.....+...... . . .......+.+++.+||+.||++|||+.||++.|+.+....+
T Consensus 262 ~~~~~~~~~~~~-~--~---------~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 262 DVISSVEEGYRL-P--A---------PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp HHHHHHHTTCCC-C--C---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHcCCCC-C--C---------CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 222222222111 1 0 01123467899999999999999999999999999875443
No 34
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3e-42 Score=349.90 Aligned_cols=251 Identities=24% Similarity=0.407 Sum_probs=205.3
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|...++..||||.+..... ..+++.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHH
Confidence 46999999999999999888999999976543 34679999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 93 ~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~----- 159 (268)
T 3sxs_A 93 YLRSHG-----KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY----- 159 (268)
T ss_dssp HHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-----
T ss_pred HHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhh-----
Confidence 997653 358999999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......+|..|+|||.+.+..++.++||||||+++|||+| |+.||...... .....
T Consensus 160 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~ 217 (268)
T 3sxs_A 160 -----------------VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLK 217 (268)
T ss_dssp -----------------EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHH
T ss_pred -----------------hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHH
Confidence 11123345677999999988889999999999999999999 99999543322 12222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
........ .+. .....+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 218 ~~~~~~~~----~~~--------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 218 VSQGHRLY----RPH--------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HHTTCCCC----CCT--------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHcCCCCC----CCC--------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 22221111 110 1123577899999999999999999999999998754
No 35
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.5e-42 Score=378.97 Aligned_cols=257 Identities=27% Similarity=0.482 Sum_probs=209.3
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
+.||+|+||.||+|...++..||||+++... ...+.|.+|+++|++++|||||++++++. .+..++|||||++|+|.+
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~ 271 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLD 271 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHH
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHH
Confidence 4699999999999999888899999997654 34678999999999999999999999986 667899999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
+++...+ ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 272 ~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~----- 339 (454)
T 1qcf_A 272 FLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY----- 339 (454)
T ss_dssp HHHSHHH----HTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-----
T ss_pred HHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce-----
Confidence 9986432 358899999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......+|..|+|||++....++.++|||||||++|||+| |+.||...... +....
T Consensus 340 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~ 397 (454)
T 1qcf_A 340 -----------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRA 397 (454)
T ss_dssp -----------------HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHH
T ss_pred -----------------eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 11122345677999999988899999999999999999999 99999643322 22222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccchhhhh
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTEQQFM 677 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~ 677 (686)
+..+ ..... + ......+.+++.+||+.||++|||+.+|++.|+.+....+.++.
T Consensus 398 i~~~-~~~~~---~--------~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~~~ 451 (454)
T 1qcf_A 398 LERG-YRMPR---P--------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYE 451 (454)
T ss_dssp HHHT-CCCCC---C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCCSSB
T ss_pred HHcC-CCCCC---C--------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccccccc
Confidence 2222 11110 0 11234688999999999999999999999999999877766653
No 36
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.1e-42 Score=365.06 Aligned_cols=247 Identities=20% Similarity=0.312 Sum_probs=196.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|+.. +++.||||+++... ....+.+.+|..++.++ +|||||++++++.+.+..++||||+++
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~g 137 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 137 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCC
Confidence 46999999999999976 47889999986532 22345688999999887 899999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 138 g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~- 207 (396)
T 4dc2_A 138 GDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 207 (396)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccCC-
Confidence 9999999764 358999999999999999999999 899999999999999999999999999997432111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc----h
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME----L 603 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~----~ 603 (686)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .
T Consensus 208 ----------------------~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~ 265 (396)
T 4dc2_A 208 ----------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 265 (396)
T ss_dssp ----------------------CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C
T ss_pred ----------------------CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchh
Confidence 11234578889999999999999999999999999999999999995432211 1
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM------RHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~ev~~~ 664 (686)
......+.+.......+.. ....+.+++.+||+.||++||++ .||+++
T Consensus 266 ~~~~~~~~i~~~~~~~p~~-------------~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 266 TEDYLFQVILEKQIRIPRS-------------LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp CHHHHHHHHHHCCCCCCTT-------------SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred hHHHHHHHHhccccCCCCc-------------CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 1122233333333222221 12357789999999999999996 566655
No 37
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=364.29 Aligned_cols=242 Identities=21% Similarity=0.285 Sum_probs=196.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|+.. +++.||||++... .....+.+.+|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g 108 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG 108 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999876 5889999998653 223346688999999998 799999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 109 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~- 178 (353)
T 3txo_A 109 GDLMFHIQKS------RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG- 178 (353)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecccCC-
Confidence 9999999765 358999999999999999999999 899999999999999999999999999997432111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+
T Consensus 179 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~ 231 (353)
T 3txo_A 179 ----------------------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-----DD 231 (353)
T ss_dssp -----------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HH
T ss_pred ----------------------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-----HH
Confidence 112345688899999999888899999999999999999999999954332 23
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM------RHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~ev~~~ 664 (686)
....+.......+..+ ...+.+++.+||+.||++||++ .|++++
T Consensus 232 ~~~~i~~~~~~~p~~~-------------~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 232 LFEAILNDEVVYPTWL-------------HEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHHHHHHCCCCCCTTS-------------CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHHHHHcCCCCCCCCC-------------CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 3444444433322211 2357789999999999999998 777765
No 38
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.4e-42 Score=355.65 Aligned_cols=258 Identities=24% Similarity=0.341 Sum_probs=197.7
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhc--cCCCCcceeeEEEEec----CceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGK--IRHPNIVSLRAYFWSV----DEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~----~~~~lV~e~~~ 446 (686)
..||+|+||.||+|.. +++.||||++... ....+..|.+++.. ++||||+++++++... ...++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 4699999999999988 5889999998653 33556667777666 7999999999997653 45789999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHH--------ccCCCCceecCCCCCCeeecCCCCeEEeecCc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH--------EVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 518 (686)
+|+|.++++. ..+++..+..++.|++.||+||| + ++|+||||||+|||++.++.+||+|||+
T Consensus 90 ~g~L~~~l~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 90 MGSLYDYLQL-------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp TCBHHHHHTT-------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred CCCHHHHHhh-------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 9999999954 35899999999999999999999 7 8999999999999999999999999999
Q ss_pred ccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC------CCCCcchHHHHHHHHHHHHhC-
Q 042348 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR------KPTQKWDIYSYGVILLEMISG- 591 (686)
Q Consensus 519 a~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwSlGvvl~elltG- 591 (686)
++......... ........||..|+|||++.+. .++.++|||||||++|||+||
T Consensus 160 a~~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~ 220 (301)
T 3q4u_A 160 AVMHSQSTNQL-------------------DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220 (301)
T ss_dssp CEEEETTTTEE-------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred eeecccccccc-------------------cccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhh
Confidence 98654322100 0111234678899999998776 445799999999999999999
Q ss_pred ---------CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 042348 592 ---------KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC 662 (686)
Q Consensus 592 ---------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 662 (686)
+.||............... ......... .+............+.+++.+||+.||++|||+.||+
T Consensus 221 ~~~~~~~~~~~pf~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~ 294 (301)
T 3q4u_A 221 VSNGIVEDYKPPFYDVVPNDPSFEDMRK-VVCVDQQRP-----NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294 (301)
T ss_dssp CBTTBCCCCCCTTTTTSCSSCCHHHHHH-HHTTSCCCC-----CCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred cCccccccccccccccCCCCcchhhhhH-HHhccCCCC-----CCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHH
Confidence 8888654433332222222 221111111 1111111234667899999999999999999999999
Q ss_pred HHHhccc
Q 042348 663 DSLDRVN 669 (686)
Q Consensus 663 ~~L~~i~ 669 (686)
+.|++|.
T Consensus 295 ~~L~~i~ 301 (301)
T 3q4u_A 295 KTLTKID 301 (301)
T ss_dssp HHHHHHC
T ss_pred HHHhccC
Confidence 9999863
No 39
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1e-41 Score=354.19 Aligned_cols=239 Identities=22% Similarity=0.333 Sum_probs=199.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg 91 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGG 91 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCC
Confidence 46999999999999876 68899999986532 233567889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--- 159 (318)
T 1fot_A 92 ELFSLLRKS------QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--- 159 (318)
T ss_dssp BHHHHHHHT------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence 999999865 358999999999999999999999 89999999999999999999999999999854311
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 160 -----------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~ 211 (318)
T 1fot_A 160 -----------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKT 211 (318)
T ss_dssp -----------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH
T ss_pred -----------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHH
Confidence 1234678889999999999999999999999999999999999954322 233
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
...+.......+..+ ..++.+++.+||+.||++|| ++.|++++
T Consensus 212 ~~~i~~~~~~~p~~~-------------~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 212 YEKILNAELRFPPFF-------------NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHHHHHCCCCCCTTS-------------CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHhCCCCCCCCC-------------CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 444444432222111 23577899999999999999 88998876
No 40
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.2e-42 Score=365.52 Aligned_cols=253 Identities=27% Similarity=0.478 Sum_probs=193.4
Q ss_pred cccCccCceEEEEEEeC----CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN----NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|+.. ++..||||+++.. .....++|.+|+.++++++||||+++++++...+..++||||+++
T Consensus 51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 130 (373)
T 2qol_A 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN 130 (373)
T ss_dssp EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCC
Confidence 47999999999999865 5678999999764 333456799999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.++++... ..+++.++..|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 131 ~sL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 131 GSLDSFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp CBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 99999998654 468999999999999999999999 8999999999999999999999999999986643211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~ 606 (686)
.. .......++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 203 ~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~----- 257 (373)
T 2qol_A 203 AA--------------------YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----- 257 (373)
T ss_dssp -------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----
T ss_pred cc--------------------eeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----
Confidence 00 01112234667999999998899999999999999999998 99999544321
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+....+.... .... .......+.+++.+||+.||++||++.||++.|+++..
T Consensus 258 ~~~~~i~~~~-~~~~-----------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 258 DVIKAVDEGY-RLPP-----------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp HHHHHHHTTE-ECCC-----------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCC-CCCC-----------CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 1222222221 1000 01123468899999999999999999999999998753
No 41
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-41 Score=348.44 Aligned_cols=249 Identities=24% Similarity=0.368 Sum_probs=201.9
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||++...++..||||++..... ..+++.+|++++++++||||+++++++.+.+..++||||+++|+|.+
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHH
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHH
Confidence 46999999999999999888999999976543 34779999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 109 ~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~----- 175 (283)
T 3gen_A 109 YLREMR-----HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----- 175 (283)
T ss_dssp HHHCGG-----GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-----
T ss_pred HHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccccc-----
Confidence 998643 458999999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......+|..|+|||.+.+..++.++||||||+++|||+| |+.||...... .....
T Consensus 176 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~ 233 (283)
T 3gen_A 176 -----------------TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEH 233 (283)
T ss_dssp -----------------HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHH
T ss_pred -----------------ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHH
Confidence 11123345677999999988889999999999999999998 99999543322 22222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
+........ + ......+.+++.+||+.||++|||+.|++++|+++.
T Consensus 234 ~~~~~~~~~----~--------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 234 IAQGLRLYR----P--------HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HHTTCCCCC----C--------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcccCCCC----C--------CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 222211110 1 011235778999999999999999999999999875
No 42
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.8e-41 Score=354.49 Aligned_cols=243 Identities=21% Similarity=0.287 Sum_probs=190.6
Q ss_pred cccCccCceEEEEEEe----CCCceEEEEEcCCCC----ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVAL----NNEEAVAVRRLGNGG----WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
..||+|+||.||+++. .+++.||+|+++... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 102 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY 102 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeC
Confidence 4699999999999987 468899999997642 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 103 ~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 103 LSGGELFMQLERE------GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp CTTEEHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred CCCCcHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 9999999999754 358999999999999999999999 8999999999999999999999999999875322
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.. .......||..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 174 ~~-----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---- 226 (327)
T 3a62_A 174 DG-----------------------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR---- 226 (327)
T ss_dssp ----------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----
T ss_pred CC-----------------------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH----
Confidence 11 112234678889999999988899999999999999999999999954322
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDSL 665 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~L 665 (686)
...+..+.......+.. ....+.+++.+||+.||++|| ++.|++++-
T Consensus 227 -~~~~~~i~~~~~~~p~~-------------~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 227 -KKTIDKILKCKLNLPPY-------------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp -HHHHHHHHHTCCCCCTT-------------SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred -HHHHHHHHhCCCCCCCC-------------CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 22334444433222211 123577899999999999999 778888763
No 43
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.5e-42 Score=355.66 Aligned_cols=259 Identities=25% Similarity=0.401 Sum_probs=200.3
Q ss_pred cccCccCceEEEEEEe-----CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~ 445 (686)
..||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...++||||+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 95 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECC
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeC
Confidence 4699999999999984 25789999999877666667899999999999999999999998654 5689999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 96 PYGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp TTCBHHHHHHHCG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred CCCCHHHHHHhcc-----cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 9999999998754 358999999999999999999999 89999999999999999999999999999866432
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc----
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM---- 601 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~---- 601 (686)
.... .......++..|+|||.+.+..++.++||||||+++|||+||..|+......
T Consensus 168 ~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~ 227 (295)
T 3ugc_A 168 KEFF--------------------KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 227 (295)
T ss_dssp ----------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHH
T ss_pred ccee--------------------eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhh
Confidence 2100 1112334567799999999889999999999999999999999998432111
Q ss_pred ------chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 602 ------ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 602 ------~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
................... .......++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 228 IGNDKQGQMIVFHLIELLKNNGRLP-----------RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HCTTCCTHHHHHHHHHHHHTTCCCC-----------CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCccccchhHHHHHHHHhccCcCC-----------CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 0011111111111111110 011223468899999999999999999999999998864
No 44
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.3e-42 Score=360.62 Aligned_cols=242 Identities=22% Similarity=0.330 Sum_probs=198.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|+.. +++.||||+++... ....+.+..|.+++.++ +||||+++++++.+.+..++||||+++
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 102 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG 102 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 58899999986532 23346688899999987 999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 103 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 172 (345)
T 1xjd_A 103 GDLMYHIQSC------HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD- 172 (345)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-
Confidence 9999999764 358999999999999999999999 899999999999999999999999999997532111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......+||..|+|||++.+..++.++|||||||++|||++|+.||..... ..
T Consensus 173 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~ 225 (345)
T 1xjd_A 173 ----------------------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EE 225 (345)
T ss_dssp ----------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HH
T ss_pred ----------------------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HH
Confidence 112345688899999999999999999999999999999999999954322 22
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH-HHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMR-HVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ev~~~ 664 (686)
....+.......+.. ....+.+++.+||+.||++||++. ||.++
T Consensus 226 ~~~~i~~~~~~~p~~-------------~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 226 LFHSIRMDNPFYPRW-------------LEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHHHHHCCCCCCTT-------------SCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHHhCCCCCCcc-------------cCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 333443333222211 123577899999999999999997 76654
No 45
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.4e-41 Score=358.94 Aligned_cols=245 Identities=22% Similarity=0.281 Sum_probs=199.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc------chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ------RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 97 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELV 97 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcC
Confidence 46999999999999876 5889999998654221 3467999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC----CeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM----EPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DfGla~~ 521 (686)
++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+++.
T Consensus 98 ~gg~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 98 SGGELFDFLAQK------ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp CSCBHHHHHTTC------SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 999999999764 458999999999999999999999 8999999999999998777 799999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 169 ~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~- 223 (361)
T 2yab_A 169 IEDGV------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK- 223 (361)
T ss_dssp CCTTC------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-
T ss_pred cCCCC------------------------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-
Confidence 54221 11234678889999999988999999999999999999999999955322
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+....+........ +.... .....+.+++.+||+.||++|||+.|++++
T Consensus 224 ----~~~~~~i~~~~~~~~----~~~~~-----~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 224 ----QETLANITAVSYDFD----EEFFS-----QTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp ----HHHHHHHHTTCCCCC----HHHHT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----HHHHHHHHhcCCCCC----chhcc-----CCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 222333333322211 11111 112357789999999999999999999875
No 46
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=360.54 Aligned_cols=244 Identities=20% Similarity=0.298 Sum_probs=197.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg 100 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGG 100 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCC
Confidence 46999999999999876 47889999986432 234567889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 101 ~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 169 (384)
T 4fr4_A 101 DLRYHLQQN------VHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-- 169 (384)
T ss_dssp EHHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCC--
Confidence 999999864 358999999999999999999999 899999999999999999999999999998654221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC---CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV---RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
......||..|+|||++.. ..++.++|||||||++|||++|+.||....... .
T Consensus 170 ----------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~ 225 (384)
T 4fr4_A 170 ----------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--S 225 (384)
T ss_dssp ----------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--H
T ss_pred ----------------------ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--H
Confidence 1234568889999999864 458999999999999999999999996443322 2
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-HHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-MRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ev~~~ 664 (686)
...+..+.......+.. ....+.+++.+||+.||++||+ +.+|.++
T Consensus 226 ~~~~~~~~~~~~~~p~~-------------~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 226 KEIVHTFETTVVTYPSA-------------WSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHHHHCCCCCCTT-------------SCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHHHHhhcccCCCCc-------------CCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 22333333322222211 1235789999999999999998 6776654
No 47
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-41 Score=350.13 Aligned_cols=256 Identities=26% Similarity=0.346 Sum_probs=200.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||+|.+... .....+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 96 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCC
Confidence 46999999999999865 5889999998543 2233567899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 97 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 166 (294)
T 4eqm_A 97 TLSEYIESH------GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL- 166 (294)
T ss_dssp BHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc-
Confidence 999999764 358999999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||.+.+..++.++|||||||++|||+||+.||...... ..
T Consensus 167 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-----~~ 220 (294)
T 4eqm_A 167 ---------------------TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-----SI 220 (294)
T ss_dssp -----------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-----HH
T ss_pred ---------------------cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----HH
Confidence 1122345788899999999999999999999999999999999999543321 11
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHhcccccc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-SMRHVCDSLDRVNIST 672 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ev~~~L~~i~~~~ 672 (686)
.........+ .. ..... ......+.+++.+||+.||++|| +++++.+.|+.+....
T Consensus 221 ~~~~~~~~~~--~~-~~~~~-----~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 221 AIKHIQDSVP--NV-TTDVR-----KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HHHHHSSCCC--CH-HHHSC-----TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred HHHHhhccCC--Cc-chhcc-----cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 2222222111 10 00000 11234678899999999999998 8999999999876433
No 48
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.2e-41 Score=355.76 Aligned_cols=247 Identities=20% Similarity=0.309 Sum_probs=196.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|+.. +++.||+|++.... ....+.+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~g 94 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 94 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 57899999997542 23345688999999988 899999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 95 g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~- 164 (345)
T 3a8x_A 95 GDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 164 (345)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCCC-
Confidence 9999999764 358999999999999999999999 899999999999999999999999999997532111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc----h
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME----L 603 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~----~ 603 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||...+... .
T Consensus 165 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 222 (345)
T 3a8x_A 165 ----------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 222 (345)
T ss_dssp ----------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------
T ss_pred ----------------------CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccc
Confidence 11234568889999999999999999999999999999999999995432211 1
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM------RHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~ev~~~ 664 (686)
......+.+.......+.. ....+.+++.+||+.||++||++ .|++++
T Consensus 223 ~~~~~~~~i~~~~~~~p~~-------------~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 223 TEDYLFQVILEKQIRIPRS-------------LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CHHHHHHHHHHCCCCCCTT-------------SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred cHHHHHHHHHcCCCCCCCC-------------CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 1112223333332222211 12357789999999999999996 566655
No 49
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.3e-41 Score=358.12 Aligned_cols=240 Identities=17% Similarity=0.234 Sum_probs=199.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg 126 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCC
Confidence 46999999999999976 58899999986532 233567889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 127 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--- 194 (350)
T 1rdq_E 127 EMFSHLRRI------GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--- 194 (350)
T ss_dssp BHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC---
Confidence 999999864 358999999999999999999999 89999999999999999999999999999854321
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....||..|+|||++.+..++.++|||||||++|||++|+.||.... ..+.
T Consensus 195 -----------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~ 246 (350)
T 1rdq_E 195 -----------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQI 246 (350)
T ss_dssp -----------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHH
T ss_pred -----------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-----HHHH
Confidence 123457888999999999999999999999999999999999995432 2233
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCDSL 665 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~L 665 (686)
...+.......+.. ....+.+++.+||+.||++||+ +.||+++-
T Consensus 247 ~~~i~~~~~~~p~~-------------~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 247 YEKIVSGKVRFPSH-------------FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp HHHHHHCCCCCCTT-------------CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HHHHHcCCCCCCCC-------------CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCc
Confidence 44444443322211 1235779999999999999998 88887763
No 50
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3e-42 Score=367.61 Aligned_cols=252 Identities=22% Similarity=0.341 Sum_probs=202.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||||.++... ....++|.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 199 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCH
Confidence 46999999999999986 68899999987643 23345789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.++++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 200 ~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~-- 269 (377)
T 3cbl_A 200 LTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA-- 269 (377)
T ss_dssp HHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE--
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee--
Confidence 99998643 358999999999999999999999 89999999999999999999999999999754321100
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~ 609 (686)
.......++..|+|||.+.+..++.++|||||||++|||+| |+.||......+ . .
T Consensus 270 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~---~ 325 (377)
T 3cbl_A 270 -------------------ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--T---R 325 (377)
T ss_dssp -------------------CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--H---H
T ss_pred -------------------ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H---H
Confidence 00011223567999999988889999999999999999999 999995543221 1 1
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
..+..+ .... .+ ......+.+++.+||+.||++|||+.+|++.|+++..
T Consensus 326 ~~~~~~-~~~~---~~--------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 326 EFVEKG-GRLP---CP--------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHTT-CCCC---CC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHcC-CCCC---CC--------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 222222 1111 00 1123467889999999999999999999999998763
No 51
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=349.97 Aligned_cols=265 Identities=20% Similarity=0.262 Sum_probs=206.5
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecC--ceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD--EKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV~e~~~~g 448 (686)
..||+|+||.||+|.... ++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||+++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 94 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTC
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCC
Confidence 469999999999999764 8899999997543 234567889999999999999999999998765 679999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee----cCCCCeEEeecCccccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL----GKNMEPHISDFGLARLADI 524 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGla~~~~~ 524 (686)
+|.+++...... ..+++.+++.++.|++.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++....
T Consensus 95 ~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 95 SLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp BHHHHHHSGGGT---TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CHHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999875421 348999999999999999999999 899999999999999 7788899999999986543
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc--------CCCCCCcchHHHHHHHHHHHHhCCCCcc
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK--------VRKPTQKWDIYSYGVILLEMISGKLPMI 596 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDVwSlGvvl~elltG~~P~~ 596 (686)
.. ......||..|+|||++. +..++.++|||||||++|||+||+.||.
T Consensus 169 ~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 224 (319)
T 4euu_A 169 DE------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224 (319)
T ss_dssp TC------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEE
T ss_pred CC------------------------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 21 112345788899999875 5678999999999999999999999996
Q ss_pred ccCccchhHHHHHHHHHhhcCCc-cc-c---cC------cccc-cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 597 QIGSMELNIVQWIQLILEDRKPM-TD-I---LD------PFLA-HDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~---~d------~~l~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...... ...+.+..+....... .. . .. +.+. ...........+.+++.+||+.||++|||++|++++
T Consensus 225 ~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h 303 (319)
T 4euu_A 225 PFEGPR-RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (319)
T ss_dssp CTTCGG-GCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred CCCccc-hhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhc
Confidence 544322 2233344444432210 00 0 00 0000 011124566678899999999999999999999999
Q ss_pred Hhcc
Q 042348 665 LDRV 668 (686)
Q Consensus 665 L~~i 668 (686)
..+.
T Consensus 304 ~~d~ 307 (319)
T 4euu_A 304 TSDI 307 (319)
T ss_dssp HHHH
T ss_pred cHHH
Confidence 8764
No 52
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.9e-41 Score=356.83 Aligned_cols=242 Identities=21% Similarity=0.310 Sum_probs=198.1
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCC---ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGG---WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|+... ++.||||++.... ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 105 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 105 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCC
Confidence 469999999999999864 7889999986532 23456788999999988 899999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 106 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 175 (353)
T 2i0e_A 106 GDLMYHIQQV------GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG- 175 (353)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred CcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC-
Confidence 9999999764 358999999999999999999999 899999999999999999999999999997432111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+
T Consensus 176 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~ 228 (353)
T 2i0e_A 176 ----------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DE 228 (353)
T ss_dssp ----------------------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HH
T ss_pred ----------------------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-----HH
Confidence 112345688899999999999999999999999999999999999954322 23
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-----MRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~ 664 (686)
..+.+.......+.. ...++.+++.+||+.||++||+ +.||+++
T Consensus 229 ~~~~i~~~~~~~p~~-------------~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 229 LFQSIMEHNVAYPKS-------------MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHHHHHHCCCCCCTT-------------SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHHHHHhCCCCCCCC-------------CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 344444443322211 1235778999999999999995 4677665
No 53
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.6e-42 Score=374.77 Aligned_cols=259 Identities=29% Similarity=0.470 Sum_probs=205.6
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|...++..||||+++.... ..++|.+|+++|++++||||+++++++.. +..++||||+++|+|.+
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~ 267 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD 267 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHH
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHH
Confidence 46999999999999998888899999976543 35789999999999999999999999866 77899999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++....+ ..+++.++..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.......
T Consensus 268 ~l~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~----- 335 (452)
T 1fmk_A 268 FLKGETG----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY----- 335 (452)
T ss_dssp HHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCce-----
Confidence 9975322 358999999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +....
T Consensus 336 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~ 393 (452)
T 1fmk_A 336 -----------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQ 393 (452)
T ss_dssp ------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHH
T ss_pred -----------------ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 01112345677999999988899999999999999999999 99999543321 22222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccchhhhhcc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTEQQFMKG 679 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~~~ 679 (686)
+..+. ... . .......+.+++.+||+.||++|||+.+|++.|+.+....+.++..+
T Consensus 394 i~~~~-~~~--~---------~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~~~ 449 (452)
T 1fmk_A 394 VERGY-RMP--C---------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 449 (452)
T ss_dssp HHTTC-CCC--C---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCCS
T ss_pred HHcCC-CCC--C---------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcccccc
Confidence 22221 111 0 01123467899999999999999999999999999987777766544
No 54
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.1e-41 Score=350.60 Aligned_cols=255 Identities=25% Similarity=0.449 Sum_probs=196.6
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|.... .+|+|.++.. .....+.+.+|++++++++||||+++++++. .+..++||||+++|+|
T Consensus 42 ~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L 118 (307)
T 3lb7_A 42 TRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSL 118 (307)
T ss_dssp EEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBH
T ss_pred eEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCcH
Confidence 469999999999998753 5888887653 3334567999999999999999999999864 5668999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++.++..|+.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++........
T Consensus 119 ~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~-- 188 (307)
T 3lb7_A 119 YKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS-- 188 (307)
T ss_dssp HHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred HHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc--
Confidence 99997654 468999999999999999999999 89999999999999999999999999999754321110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.......||..|+|||.+. +..++.++|||||||++|||++|+.||......+.
T Consensus 189 -------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~---- 245 (307)
T 3lb7_A 189 -------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---- 245 (307)
T ss_dssp ------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH----
T ss_pred -------------------ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH----
Confidence 1122345788899999885 56789999999999999999999999965433221
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
+..........+.. .. +. ..+...+.+++.+||+.||++||++.||+++|+.+...
T Consensus 246 -~~~~~~~~~~~~~~-~~-~~-----~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 246 -IIFMVGRGYASPDL-SK-LY-----KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -HHHHHHHTCCCCCS-TT-SC-----SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -HHHHHhcCCCCcch-hh-hh-----cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 11112221111111 00 00 11234688999999999999999999999999988644
No 55
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=354.69 Aligned_cols=245 Identities=20% Similarity=0.295 Sum_probs=199.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... +++.||+|.+.... .....+.+|+.++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence 46999999999999876 57889999987543 33467889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC--CCCeEEeecCcccccccccCCc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK--NMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~~~~~~~~~ 529 (686)
+++.... ..+++.++..++.|++.||+|||+ ++|+||||||+|||++. ++.+||+|||+++......
T Consensus 90 ~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--- 158 (321)
T 1tki_A 90 ERINTSA-----FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--- 158 (321)
T ss_dssp HHHTSSS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC---
Confidence 9997653 358999999999999999999999 89999999999999987 7899999999998654221
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.+
T Consensus 159 ---------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~ 212 (321)
T 1tki_A 159 ---------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-----QQII 212 (321)
T ss_dssp ---------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH
T ss_pred ---------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-----HHHH
Confidence 11234567789999999988889999999999999999999999954322 2233
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+......... .... ....++.+++.+||+.||++|||+.|++++
T Consensus 213 ~~i~~~~~~~~~----~~~~-----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 213 ENIMNAEYTFDE----EAFK-----EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHTCCCCCH----HHHT-----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHcCCCCCCh----hhhc-----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 344433322111 0000 122467899999999999999999999986
No 56
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=361.18 Aligned_cols=246 Identities=24% Similarity=0.322 Sum_probs=196.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~ 174 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 46999999999999875 58899999998766566678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee--cCCCCeEEeecCcccccccccCCc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL--GKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl--~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++......
T Consensus 175 ~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--- 243 (373)
T 2x4f_A 175 DRIIDES-----YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--- 243 (373)
T ss_dssp HHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---
Confidence 9987543 358999999999999999999999 899999999999999 567889999999998654221
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...+
T Consensus 244 ---------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~ 297 (373)
T 2x4f_A 244 ---------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-----AETL 297 (373)
T ss_dssp ---------------------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH
T ss_pred ---------------------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHH
Confidence 11234578889999999988899999999999999999999999954332 2223
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+......... +.. ......+.+++.+||+.||++|||+.|++++
T Consensus 298 ~~i~~~~~~~~~---~~~------~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 298 NNILACRWDLED---EEF------QDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp HHHHHTCCCSCS---GGG------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHhccCCCCh---hhh------ccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 333333222111 100 0122467899999999999999999999985
No 57
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-41 Score=352.39 Aligned_cols=246 Identities=21% Similarity=0.304 Sum_probs=198.9
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCCc------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
...||+|+||.||+|... +++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 95 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence 346999999999999876 588999999865322 1356799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC----CeEEeecCccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM----EPHISDFGLAR 520 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DfGla~ 520 (686)
+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|||+++
T Consensus 96 ~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 96 VAGGELFDFLAEK------ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp CCSCBHHHHHTTS------SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred CCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999754 458999999999999999999999 8999999999999999887 89999999998
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
...... ......||..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 167 ~~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 222 (326)
T 2y0a_A 167 KIDFGN------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222 (326)
T ss_dssp ECCTTS------------------------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred ECCCCC------------------------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH
Confidence 654221 11234578889999999988999999999999999999999999954322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. +....+......... .... .....+.+++.+||+.||++|||+.|++++
T Consensus 223 ~-----~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 223 Q-----ETLANVSAVNYEFED----EYFS-----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp H-----HHHHHHHHTCCCCCH----HHHT-----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred H-----HHHHHHHhcCCCcCc----cccc-----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 222222222211111 0000 112357789999999999999999999986
No 58
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2e-41 Score=351.51 Aligned_cols=258 Identities=24% Similarity=0.332 Sum_probs=196.1
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|...+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++ |+|
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l 105 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDL 105 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEH
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCH
Confidence 36999999999999998899999999865422 234678899999999999999999999999999999999997 588
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 106 ~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--- 174 (311)
T 3niz_A 106 KKVLDENK-----TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR--- 174 (311)
T ss_dssp HHHHHTCT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---
T ss_pred HHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc---
Confidence 88887654 458999999999999999999999 8999999999999999999999999999986532111
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......+|..|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+
T Consensus 175 --------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i 232 (311)
T 3niz_A 175 --------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD--QLPKI 232 (311)
T ss_dssp -----------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT--HHHHH
T ss_pred --------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH--HHHHH
Confidence 1123456888999999876 568999999999999999999999996544332 22222
Q ss_pred HHHHhhcCC--cccccC------cccc--cCCCc----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKP--MTDILD------PFLA--HDLDK----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~--~~~~~d------~~l~--~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........+ +....+ .... ..... +....++.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 233 FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 222221111 000000 0000 00000 0122467899999999999999999999874
No 59
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.3e-42 Score=363.60 Aligned_cols=259 Identities=23% Similarity=0.306 Sum_probs=204.1
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... ++..||||++... ......++.+|+.++++++|||||++++++...+..++||||+
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 156 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 156 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeC
Confidence 46999999999999853 3568999999754 3344567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCcc-ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC---CeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGII-SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM---EPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfGla~~ 521 (686)
++|+|.+++....... ....+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+++.
T Consensus 157 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~ 233 (367)
T 3l9p_A 157 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233 (367)
T ss_dssp TTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECCCccccc
Confidence 9999999998653211 11358999999999999999999999 8999999999999999555 599999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~ 600 (686)
....... .......+|..|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 234 ~~~~~~~---------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~ 292 (367)
T 3l9p_A 234 IYRAGYY---------------------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 292 (367)
T ss_dssp HHHHSSC---------------------TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ccccccc---------------------ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 5432211 01122346778999999988899999999999999999998 9999954322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccc
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIST 672 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 672 (686)
.+....+........ .......+.+++.+||+.||++|||+.||+++|+.+....
T Consensus 293 -----~~~~~~i~~~~~~~~------------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 293 -----QEVLEFVTSGGRMDP------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -----HHHHHHHHTTCCCCC------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -----HHHHHHHHcCCCCCC------------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 122233332221100 0112235789999999999999999999999999886543
No 60
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=364.57 Aligned_cols=246 Identities=22% Similarity=0.292 Sum_probs=198.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|||||++++++.+.+..++|||||++|+
T Consensus 17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 96 (444)
T 3soa_A 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE 96 (444)
T ss_dssp EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCB
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCC
Confidence 46999999999999864 68899999986543 2334678999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec---CCCCeEEeecCccccccccc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~~~~~~~ 526 (686)
|.+.+... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||+++......
T Consensus 97 L~~~i~~~------~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 97 LFEDIVAR------EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp HHHHHHHC------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 99999865 358999999999999999999999 8999999999999998 46789999999997554221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
.......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... .
T Consensus 168 -----------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-----~ 219 (444)
T 3soa_A 168 -----------------------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-----H 219 (444)
T ss_dssp -----------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----H
T ss_pred -----------------------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-----H
Confidence 112245678899999999988999999999999999999999999954322 2
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+..+....+. +.. ......+.+++.+||+.||++|||+.|++++
T Consensus 220 ~~~~~i~~~~~~~~~---~~~------~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 220 RLYQQIKAGAYDFPS---PEW------DTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHHHHHHTCCCCCT---TTT------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhCCCCCCc---ccc------ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 223334333322211 111 1122357899999999999999999999886
No 61
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-41 Score=356.06 Aligned_cols=252 Identities=26% Similarity=0.375 Sum_probs=195.9
Q ss_pred cccCccCceEEEEEEeC-CCc----eEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEE----AVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|... +++ .||+|.+... .....+++.+|+.++++++||||+++++++... ..++||||++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~~ 99 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP 99 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECCT
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEecC
Confidence 46999999999999864 333 4688888653 234457899999999999999999999999875 4789999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..++.|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 100 FGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp TCBHHHHHHHST-----TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 999999998754 468999999999999999999999 899999999999999999999999999998764322
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. .......+|..|+|||++.+..++.++|||||||++|||+| |+.||....... +
T Consensus 172 ~~---------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~ 228 (327)
T 3poz_A 172 KE---------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--I 228 (327)
T ss_dssp C----------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--H
T ss_pred cc---------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--H
Confidence 11 11123345778999999999999999999999999999999 999996543322 1
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
. ........... .......+.+++.+||+.||++||++.|++++|+++...
T Consensus 229 ~----~~~~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 229 S----SILEKGERLPQ-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp H----HHHHTTCCCCC-----------CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred H----HHHHcCCCCCC-----------CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 1 11222111110 011234678899999999999999999999999987654
No 62
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4e-41 Score=356.42 Aligned_cols=246 Identities=23% Similarity=0.326 Sum_probs=199.1
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
...||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg 113 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 346999999999999875 58899999986542 234567899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC---CCeEEeecCcccccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN---MEPHISDFGLARLADIA 525 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DfGla~~~~~~ 525 (686)
+|.+++... ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+++.....
T Consensus 114 ~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 114 ELFEDIVAR------EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp BHHHHHTTC------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 999999765 358999999999999999999999 899999999999999865 45999999999755421
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 185 ~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~----- 235 (362)
T 2bdw_A 185 E------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----- 235 (362)
T ss_dssp C------------------------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----
T ss_pred c------------------------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----
Confidence 1 11234678889999999988999999999999999999999999954322
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+.......+. +.. ......+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~i~~~~~~~~~---~~~------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 236 HRLYAQIKAGAYDYPS---PEW------DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHHHHHHTCCCCCT---TGG------GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHhCCCCCCc---ccc------cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2223333333222111 100 1123467899999999999999999999876
No 63
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.1e-41 Score=369.42 Aligned_cols=245 Identities=24% Similarity=0.417 Sum_probs=200.2
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecC-ceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD-EKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... ++.||||.++... ..+.|.+|+++|++++|||||++++++...+ ..++|||||++|+|.
T Consensus 199 ~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~ 275 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275 (450)
T ss_dssp EEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHH
T ss_pred eeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHH
Confidence 46999999999999986 6789999997653 4578999999999999999999999987765 789999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++..... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 276 ~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~----- 343 (450)
T 1k9a_A 276 DYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 343 (450)
T ss_dssp HHHHHHCT----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred HHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-----
Confidence 99986532 347999999999999999999999 899999999999999999999999999997432111
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
....++..|+|||.+.+..++.++|||||||++|||+| |+.||......+ . ..
T Consensus 344 ---------------------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~---~~ 397 (450)
T 1k9a_A 344 ---------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--V---VP 397 (450)
T ss_dssp ------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--H---HH
T ss_pred ---------------------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--H---HH
Confidence 11234667999999999999999999999999999999 999996543322 1 22
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.+..+. .+. . ...+...+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 398 ~i~~~~-~~~------~-----p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 398 RVEKGY-KMD------A-----PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HHHTTC-CCC------C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCC-CCC------C-----CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 222221 110 0 01123468899999999999999999999999998864
No 64
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=359.18 Aligned_cols=258 Identities=25% Similarity=0.367 Sum_probs=205.1
Q ss_pred cccCccCceEEEEEEeC--------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEE
Q 042348 373 FLLGKSTIGIVYKVALN--------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 442 (686)
..||+|+||.||+|... .+..||||++.... ....+++.+|+++++++ +|||||++++++...+..++||
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~ 154 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 154 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEE
Confidence 46999999999999852 23579999997643 33457799999999999 9999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeE
Q 042348 443 DYIPNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 512 (686)
||+++|+|.+++...... .....+++.+++.|+.|++.||+|||+ ++|+||||||+|||++.++.+|
T Consensus 155 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~k 231 (382)
T 3tt0_A 155 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMK 231 (382)
T ss_dssp ECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEE
T ss_pred EecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEEcCCCcEE
Confidence 999999999999865421 111358999999999999999999999 8999999999999999999999
Q ss_pred EeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-C
Q 042348 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591 (686)
Q Consensus 513 l~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G 591 (686)
|+|||+++........ .......+|..|+|||++.+..++.++|||||||++|||++ |
T Consensus 232 L~DFG~a~~~~~~~~~---------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g 290 (382)
T 3tt0_A 232 IADFGLARDIHHIDYY---------------------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290 (382)
T ss_dssp ECSCSCCCCSSCCCTT---------------------CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred EcccCccccccccccc---------------------ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9999999865432110 11123445778999999999999999999999999999999 9
Q ss_pred CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 592 KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 592 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
+.||..... .+....+........ + .....++.+++.+||+.||++|||+.||+++|+++...
T Consensus 291 ~~p~~~~~~-----~~~~~~~~~~~~~~~----~--------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 291 GSPYPGVPV-----EELFKLLKEGHRMDK----P--------SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp CCSSTTCCH-----HHHHHHHHTTCCCCC----C--------SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCH-----HHHHHHHHcCCCCCC----C--------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 999954322 222333322211100 0 01223678999999999999999999999999998643
No 65
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.7e-42 Score=361.99 Aligned_cols=259 Identities=26% Similarity=0.352 Sum_probs=202.0
Q ss_pred cccCccCceEEEEEEe------CCCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCc-eeEEEe
Q 042348 373 FLLGKSTIGIVYKVAL------NNEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDE-KLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~-~~lV~e 443 (686)
..||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++.++ +||||+++++++...+. .++|||
T Consensus 28 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e 107 (359)
T 3vhe_A 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 107 (359)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEE
T ss_pred eeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEE
Confidence 4699999999999974 245789999997643 33456799999999999 79999999999987654 899999
Q ss_pred ccCCCCHHHHhhcCCCcc------------------------------------------------------------cc
Q 042348 444 YIPNGSLATAIHGKAGII------------------------------------------------------------SY 463 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~------------------------------------------------------------~~ 463 (686)
|+++|+|.++++...... ..
T Consensus 108 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (359)
T 3vhe_A 108 FCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYK 187 (359)
T ss_dssp CCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTTT
T ss_pred ecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhc
Confidence 999999999998754210 01
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCC
Q 042348 464 RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543 (686)
Q Consensus 464 ~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~ 543 (686)
..+++..+..|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 188 ~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--------------- 249 (359)
T 3vhe_A 188 DFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY--------------- 249 (359)
T ss_dssp TCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC---------------
T ss_pred cccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc---------------
Confidence 228999999999999999999999 89999999999999999999999999999865322110
Q ss_pred CCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHHHHhhcCCcccc
Q 042348 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDI 622 (686)
Q Consensus 544 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (686)
.......+|..|+|||++.+..++.++|||||||++|||+| |+.||......+. +........... .
T Consensus 250 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-----~~~~~~~~~~~~-~ 317 (359)
T 3vhe_A 250 ------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMR-A 317 (359)
T ss_dssp ------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-----HHHHHHHTCCCC-C
T ss_pred ------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-----HHHHHHcCCCCC-C
Confidence 11223456788999999998899999999999999999999 9999965433221 111222211110 0
Q ss_pred cCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 623 LDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 623 ~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
+ .....++.+++.+||+.||++|||+.||+++|+++..+
T Consensus 318 --~--------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 318 --P--------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp --C--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --C--------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 0 01123578899999999999999999999999987643
No 66
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.7e-42 Score=357.48 Aligned_cols=247 Identities=24% Similarity=0.337 Sum_probs=196.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L 92 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcH
Confidence 46999999999999876 68899999986542 22346789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.+......
T Consensus 93 ~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-- 161 (323)
T 3tki_A 93 FDRIEPD------IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-- 161 (323)
T ss_dssp GGGSBTT------TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE--
T ss_pred HHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc--
Confidence 9999754 358999999999999999999999 89999999999999999999999999999865422110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......||..|+|||++.+..+ +.++|||||||++|||++|+.||............+
T Consensus 162 -------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~- 221 (323)
T 3tki_A 162 -------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW- 221 (323)
T ss_dssp -------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHH-
T ss_pred -------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH-
Confidence 11234567889999999987665 779999999999999999999996554433222221
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....... .+ .......+.+++.+||+.||++|||+.|++++
T Consensus 222 ---~~~~~~~----~~-------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 222 ---KEKKTYL----NP-------WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---HTTCTTS----TT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---hcccccC----Cc-------cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1111111 00 01122357789999999999999999999876
No 67
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-41 Score=341.49 Aligned_cols=250 Identities=24% Similarity=0.393 Sum_probs=205.0
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|...+++.||+|.+..... ..+++.+|++++++++||||+++++++.+.+..++||||+++++|.+
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHH
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHH
Confidence 46999999999999998888999999976543 34689999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 93 ~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~----- 159 (267)
T 3t9t_A 93 YLRTQR-----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY----- 159 (267)
T ss_dssp HHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-----
T ss_pred HHhhCc-----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccc-----
Confidence 998654 358999999999999999999999 8999999999999999999999999999986532110
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......
T Consensus 160 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~ 217 (267)
T 3t9t_A 160 -----------------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVED 217 (267)
T ss_dssp -----------------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHH
T ss_pred -----------------cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHH
Confidence 11123345677999999988889999999999999999999 8999954322 122233
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+....... .+ ......+.+++.+||+.||++|||+.|++++|+++..
T Consensus 218 i~~~~~~~----~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 218 ISTGFRLY----KP--------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHTTCCCC----CC--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCCcCC----CC--------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 32221111 01 0112357789999999999999999999999998864
No 68
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.7e-41 Score=357.69 Aligned_cols=266 Identities=15% Similarity=0.192 Sum_probs=200.4
Q ss_pred cccCccCceEEEEEEeCC------CceEEEEEcCCCCccc-----------hHHHHHHHHHHhccCCCCcceeeEEEEec
Q 042348 373 FLLGKSTIGIVYKVALNN------EEAVAVRRLGNGGWQR-----------FKEFQTEAEAIGKIRHPNIVSLRAYFWSV 435 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 435 (686)
..||+|+||.||+|.... ++.||||++....... ...+..|+..+..++||||+++++++...
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 120 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence 469999999999998765 3789999986543211 12244566677788899999999999875
Q ss_pred ----CceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec--CCC
Q 042348 436 ----DEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG--KNM 509 (686)
Q Consensus 436 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~--~~~ 509 (686)
...++||||+ +++|.+++.... ..+++..++.|+.||+.||+|||+ ++|+||||||+|||++ .++
T Consensus 121 ~~~~~~~~lv~e~~-g~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 121 KNGKSYRFMIMDRF-GSDLQKIYEANA-----KRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp ETTEEEEEEEEECE-EEEHHHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSCTT
T ss_pred cCCcceEEEEEeCC-CCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCCCC
Confidence 4479999999 999999998753 469999999999999999999999 8999999999999999 889
Q ss_pred CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHH
Q 042348 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589 (686)
Q Consensus 510 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ell 589 (686)
.+||+|||+++.+......... .........||..|+|||++.+..++.++|||||||++|||+
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 255 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAY----------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWL 255 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCS----------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCcceecccCCccccc----------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHH
Confidence 9999999999876543221100 001123456888999999999999999999999999999999
Q ss_pred hCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 590 SGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 590 tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
||+.||....... ............ ...+.+++.+... ....++.+++..||+.||++||++.+|++.|+++.
T Consensus 256 ~g~~Pf~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 256 TGHLPWEDNLKDP-KYVRDSKIRYRE--NIASLMDKCFPAA----NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp HSCCTTGGGTTCH-HHHHHHHHHHHH--CHHHHHHHHSCTT----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred hCCCCccccccCH-HHHHHHHHHhhh--hHHHHHHHhcccc----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 9999996533322 222222221111 2223333322111 12346889999999999999999999999998865
Q ss_pred c
Q 042348 670 I 670 (686)
Q Consensus 670 ~ 670 (686)
.
T Consensus 329 ~ 329 (364)
T 3op5_A 329 K 329 (364)
T ss_dssp H
T ss_pred H
Confidence 3
No 69
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.2e-41 Score=357.33 Aligned_cols=250 Identities=18% Similarity=0.274 Sum_probs=197.8
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCC-----CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-----GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
...||+|+||.||+|... +++.||||.+... .....+.+.+|+.++++++||||+++++++.+.+..++|||||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 108 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 357999999999999875 5889999998532 1123577999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC---eEEeecCccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME---PHISDFGLARLA 522 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfGla~~~ 522 (686)
++|+|.+++...... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++. +||+|||+++..
T Consensus 109 ~g~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 109 DGADLCFEIVKRADA--GFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp SSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCHHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999888653211 1358999999999999999999999 89999999999999986654 999999999865
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
..... ......||..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 184 ~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--- 237 (351)
T 3c0i_A 184 GESGL-----------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--- 237 (351)
T ss_dssp CTTSC-----------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---
T ss_pred cCCCe-----------------------eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---
Confidence 42210 1123467889999999998899999999999999999999999995421
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+........ +.... .....+.+++.+||+.||++|||+.|++++
T Consensus 238 ---~~~~~~i~~~~~~~~----~~~~~-----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 238 ---ERLFEGIIKGKYKMN----PRQWS-----HISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp ---HHHHHHHHHTCCCCC----HHHHT-----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHHHHHHHcCCCCCC----ccccc-----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 122333333322211 10000 112367899999999999999999999875
No 70
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4e-41 Score=351.73 Aligned_cols=253 Identities=24% Similarity=0.367 Sum_probs=198.1
Q ss_pred cccCccCceEEEEEEeC-CCce----EEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEA----VAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|... +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++||||++
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 97 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLP 97 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCT
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCC
Confidence 46999999999999865 3443 7888875432 334467889999999999999999999886 567899999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..+..|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 98 LGSLLDHVRQHR-----GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp TCBSHHHHHSSG-----GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred CCCHHHHHHHcc-----ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 999999998653 358999999999999999999999 899999999999999999999999999998764322
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. .......+|..|+|||++.+..++.++|||||||++|||+| |+.||......+ .
T Consensus 170 ~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~ 226 (325)
T 3kex_A 170 KQ---------------------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--V 226 (325)
T ss_dssp TC---------------------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--H
T ss_pred cc---------------------ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--H
Confidence 11 11123456778999999998899999999999999999999 999996543222 1
Q ss_pred HHHHHHHHhhcC-CcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 606 VQWIQLILEDRK-PMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 606 ~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
...+..... ..... ....+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 227 ---~~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~ 279 (325)
T 3kex_A 227 ---PDLLEKGERLAQPQI-------------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPP 279 (325)
T ss_dssp ---HHHHHTTCBCCCCTT-------------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred ---HHHHHcCCCCCCCCc-------------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 122222111 11111 11235689999999999999999999999999865443
No 71
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-41 Score=358.39 Aligned_cols=246 Identities=20% Similarity=0.287 Sum_probs=200.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
+.||+|+||.||+|... +++.||+|.+..........+.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~ 136 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF 136 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHH
Confidence 46999999999999875 58899999997765555667999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC--CCCeEEeecCcccccccccCCc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK--NMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~~~~~~~~~ 529 (686)
+++.... ..+++.++..++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||+++......
T Consensus 137 ~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~--- 205 (387)
T 1kob_A 137 DRIAAED-----YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--- 205 (387)
T ss_dssp HHTTCTT-----CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS---
T ss_pred HHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCc---
Confidence 9997653 358999999999999999999999 89999999999999974 5789999999998654221
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 206 ---------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~ 259 (387)
T 1kob_A 206 ---------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-----LETL 259 (387)
T ss_dssp ---------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHH
T ss_pred ---------------------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-----HHHH
Confidence 11223578889999999998999999999999999999999999954322 2223
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+......... ... .....++.+++.+||+.||++|||+.|++++
T Consensus 260 ~~i~~~~~~~~~----~~~-----~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 260 QNVKRCDWEFDE----DAF-----SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HHHHHCCCCCCS----STT-----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHhCCCCCCc----ccc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 333332221111 000 0122367899999999999999999999986
No 72
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=7.8e-41 Score=343.10 Aligned_cols=246 Identities=28% Similarity=0.484 Sum_probs=194.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccc-------hHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQR-------FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
..||+|+||.||+|... +++.||||++....... .+.+.+|++++++++||||+++++++.+.. ++||||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~ 102 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEF 102 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEEC
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEe
Confidence 46999999999999875 68899999986543221 267899999999999999999999986544 799999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC--ceecCCCCCCeeecCCCC-----eEEeecC
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR--YVHGDLRPSNILLGKNME-----PHISDFG 517 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--iiHrDlkp~NILl~~~~~-----~kl~DfG 517 (686)
+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++ |+||||||+||+++.++. +||+|||
T Consensus 103 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 103 VPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp CTTCBHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred cCCCCHHHHHhccc-----CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 99999999987654 469999999999999999999999 78 999999999999988776 9999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc--CCCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK--VRKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
+++..... .....||..|+|||++. ...++.++|||||||++|||++|+.||
T Consensus 175 ~~~~~~~~--------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf 228 (287)
T 4f0f_A 175 LSQQSVHS--------------------------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228 (287)
T ss_dssp TCBCCSSC--------------------------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccccccc--------------------------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence 98743211 12345678899999983 455789999999999999999999999
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
......... ........... .. ... .....+.+++.+||+.||++|||+.|+++.|+++
T Consensus 229 ~~~~~~~~~---~~~~~~~~~~~-~~-----~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 229 DEYSYGKIK---FINMIREEGLR-PT-----IPE-----DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TTCCCCHHH---HHHHHHHSCCC-CC-----CCT-----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccccccHHH---HHHHHhccCCC-CC-----CCc-----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 654433321 12222222111 11 111 1234678999999999999999999999999875
No 73
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.4e-41 Score=352.24 Aligned_cols=259 Identities=15% Similarity=0.161 Sum_probs=203.9
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|.. .+++.||||.+..... .+.+.+|+++++++ +||||+++++++...+..++||||+ +++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 4699999999999986 4688999999865432 35689999999999 9999999999999999999999999 9999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC-----eEEeecCcccccccc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME-----PHISDFGLARLADIA 525 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~-----~kl~DfGla~~~~~~ 525 (686)
.+++.... ..+++..+..|+.|++.||+|||+ ++|+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 92 EDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred HHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 99998653 469999999999999999999999 89999999999999998887 999999999876432
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
...... .........||..|+|||++.+..++.++|||||||++|||++|+.||...... +.
T Consensus 164 ~~~~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~ 225 (330)
T 2izr_A 164 ETKKHI----------------PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TL 225 (330)
T ss_dssp TTCCBC----------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SH
T ss_pred CCCccc----------------cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cH
Confidence 211000 001223567889999999999999999999999999999999999999654332 22
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
.+.+..+.....+... ..+.. ... ++.+++.+||+.||.+||++.+|++.|+++.
T Consensus 226 ~~~~~~i~~~~~~~~~---~~~~~-----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 226 KERYQKIGDTKRATPI---EVLCE-----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHHHHHHHHHHHHSCH---HHHTT-----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCH---HHHhc-----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 2333333222111110 00000 012 6889999999999999999999999998764
No 74
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-41 Score=356.31 Aligned_cols=260 Identities=27% Similarity=0.393 Sum_probs=204.5
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||||.++... ....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 132 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYM 132 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecC
Confidence 46999999999999875 34789999997653 333567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCcc------------------ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC
Q 042348 446 PNGSLATAIHGKAGII------------------SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK 507 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~ 507 (686)
++|+|.+++....... ....+++.+++.|+.||+.||+|||+ ++|+||||||+||+++.
T Consensus 133 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~ 209 (343)
T 1luf_A 133 AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGE 209 (343)
T ss_dssp TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECG
T ss_pred CCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEECC
Confidence 9999999998642110 01468999999999999999999999 89999999999999999
Q ss_pred CCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHH
Q 042348 508 NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587 (686)
Q Consensus 508 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~e 587 (686)
++.+||+|||+++........ .......+|..|+|||.+.+..++.++|||||||++||
T Consensus 210 ~~~~kl~Dfg~~~~~~~~~~~---------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e 268 (343)
T 1luf_A 210 NMVVKIADFGLSRNIYSADYY---------------------KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 268 (343)
T ss_dssp GGCEEECCCSCHHHHTGGGCB---------------------C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCcccccCccc---------------------cccCCCcccceecChhhhccCCcCcccccHHHHHHHHH
Confidence 999999999999865432210 01123456778999999988889999999999999999
Q ss_pred HHh-CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 588 MIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 588 llt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
|+| |+.||..... .+....+...... .. . ......+.+++.+||+.||++|||+.|++++|+
T Consensus 269 l~t~g~~p~~~~~~-----~~~~~~~~~~~~~--~~-~---------~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 269 IFSYGLQPYYGMAH-----EEVIYYVRDGNIL--AC-P---------ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp HHTTTCCTTTTSCH-----HHHHHHHHTTCCC--CC-C---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcCCCcCCCCCh-----HHHHHHHhCCCcC--CC-C---------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 999 9999954332 1222333222211 00 0 112236789999999999999999999999999
Q ss_pred cccccch
Q 042348 667 RVNISTE 673 (686)
Q Consensus 667 ~i~~~~~ 673 (686)
++....+
T Consensus 332 ~~~~~~~ 338 (343)
T 1luf_A 332 RMCERAE 338 (343)
T ss_dssp HTTC---
T ss_pred HHHhhhh
Confidence 9876544
No 75
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.2e-41 Score=344.63 Aligned_cols=258 Identities=23% Similarity=0.329 Sum_probs=194.5
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|...+++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||+++ +|
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l 86 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL 86 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CH
Confidence 46999999999999998899999999865432 2346788999999999999999999999999999999999975 99
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 154 (288)
T 1ob3_A 87 KKLLDVCE-----GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---- 154 (288)
T ss_dssp HHHHHTST-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred HHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccc----
Confidence 99997654 458999999999999999999999 899999999999999999999999999997653211
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......+|..|+|||++.+ ..++.++|||||||++|||++|+.||...... +....+
T Consensus 155 -------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~ 213 (288)
T 1ob3_A 155 -------------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--DQLMRI 213 (288)
T ss_dssp --------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHH
T ss_pred -------------------cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 01123456788999999876 45899999999999999999999999654322 111111
Q ss_pred HHHHhhcC--Cccc-----ccCcccccC--C----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRK--PMTD-----ILDPFLAHD--L----DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~--~~~~-----~~d~~l~~~--~----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ .+.. ..++..... . ........+.+++.+||+.||++|||+.|++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 214 FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp HHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11111100 0000 001110000 0 001123467899999999999999999999864
No 76
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.5e-41 Score=374.66 Aligned_cols=251 Identities=25% Similarity=0.383 Sum_probs=205.1
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|.+.. +..||||.++.... ..++|.+|+++|++++|||||+++++|...+..++|||||++|+|.
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~ 304 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHH
Confidence 469999999999999875 78999999976543 4578999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++..... ..+++..++.|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 305 ~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---- 373 (495)
T 1opk_A 305 DYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY---- 373 (495)
T ss_dssp HHHHHSCT----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE----
T ss_pred HHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCce----
Confidence 99986432 458999999999999999999999 8999999999999999999999999999986532110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
.......++..|+|||++.+..++.++|||||||++|||+| |+.||....... +. .
T Consensus 374 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~---~ 430 (495)
T 1opk_A 374 ------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VY---E 430 (495)
T ss_dssp ------------------ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HH---H
T ss_pred ------------------eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HH---H
Confidence 11122345678999999988889999999999999999999 999996543322 11 2
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.+ ....... . .......+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 431 ~~-~~~~~~~---~--------~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 431 LL-EKDYRME---R--------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp HH-HTTCCCC---C--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred HH-HcCCCCC---C--------CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 22 2211110 0 01123467899999999999999999999999999753
No 77
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.6e-41 Score=347.21 Aligned_cols=251 Identities=21% Similarity=0.320 Sum_probs=191.6
Q ss_pred cccCccCceEEEEEEeCC----CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALNN----EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|.... +..||+|.+.... ....+.+.+|+.++++++||||+++++++ ..+..++||||+++
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~ 99 (281)
T 1mp8_A 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTL 99 (281)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCTT
T ss_pred eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCCC
Confidence 469999999999998743 4579999987643 33456799999999999999999999998 45678999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 100 GELRSFLQVRK-----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EEHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 99999998653 358999999999999999999999 8999999999999999999999999999986542211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~ 606 (686)
.......+|..|+|||.+.+..++.++|||||||++|||++ |..||......+ .
T Consensus 172 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~- 226 (281)
T 1mp8_A 172 ----------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--V- 226 (281)
T ss_dssp -----------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--H-
T ss_pred ----------------------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--H-
Confidence 01112345677999999988889999999999999999997 999996543322 1
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
...+...... . .. ......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 227 --~~~i~~~~~~--~-~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 227 --IGRIENGERL--P-MP---------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp --HHHHHTTCCC--C-CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HHHHHcCCCC--C-CC---------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 2222222111 0 01 11224677899999999999999999999999998643
No 78
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.3e-41 Score=353.24 Aligned_cols=258 Identities=22% Similarity=0.353 Sum_probs=191.5
Q ss_pred hcccCccCceEEEEEEeCCC----ceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCce------e
Q 042348 372 AFLLGKSTIGIVYKVALNNE----EAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK------L 439 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~------~ 439 (686)
...||+|+||.||+|..... ..||||.+... .....+++.+|++++++++||||+++++++...+.. +
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 34799999999999987643 27999999764 334467899999999999999999999999877655 9
Q ss_pred EEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcc
Q 042348 440 LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLA 519 (686)
Q Consensus 440 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 519 (686)
+||||+++|+|.+++...........+++.++..|+.|++.||+|||+ ++|+||||||+||++++++.+||+|||++
T Consensus 108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl~Dfg~a 184 (323)
T 3qup_A 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLS 184 (323)
T ss_dssp EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEEeecccc
Confidence 999999999999999754321112358999999999999999999999 89999999999999999999999999999
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcccc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQI 598 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~ 598 (686)
+........ .......++..|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 185 ~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 243 (323)
T 3qup_A 185 RKIYSGDYY---------------------RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243 (323)
T ss_dssp -------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccccccc---------------------cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence 865432210 01122345677999999998899999999999999999999 99999654
Q ss_pred CccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 599 GSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
...+ . .......... .. . ......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 244 ~~~~--~---~~~~~~~~~~-~~--~---------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 244 ENAE--I---YNYLIGGNRL-KQ--P---------PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp CGGG--H---HHHHHTTCCC-CC--C---------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ChHH--H---HHHHhcCCCC-CC--C---------CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 3322 1 2222222111 00 0 1122468899999999999999999999999998753
No 79
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=350.12 Aligned_cols=263 Identities=25% Similarity=0.313 Sum_probs=199.1
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhcc--CCCCcceeeEEEEec----CceeEEEecc
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI--RHPNIVSLRAYFWSV----DEKLLIYDYI 445 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~----~~~~lV~e~~ 445 (686)
...||+|+||.||+|+.. ++.||||++... ....+..|.+++..+ +||||+++++++... ...++||||+
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 357999999999999886 889999998543 234455566666554 899999999999887 6789999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC--------CceecCCCCCCeeecCCCCeEEeecC
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK--------RYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~--------~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
++|+|.++++.. .+++..+..++.|++.||+|||+ + +|+||||||+|||++.++.+||+|||
T Consensus 118 ~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg 187 (337)
T 3mdy_A 118 ENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187 (337)
T ss_dssp TTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred CCCcHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence 999999999653 48999999999999999999998 6 99999999999999999999999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCc------chHHHHHHHHHHHHhC
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK------WDIYSYGVILLEMISG 591 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------sDVwSlGvvl~elltG 591 (686)
+++......... ........||..|+|||++.+..++.+ +|||||||++|||+||
T Consensus 188 ~a~~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 188 LAVKFISDTNEV-------------------DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp TCEECC----------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred Cceeeccccccc-------------------cCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 997654322110 011224568889999999987776665 9999999999999999
Q ss_pred ----------CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 042348 592 ----------KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661 (686)
Q Consensus 592 ----------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 661 (686)
+.||............. ........ ..+.............++.+++.+||+.||++|||+.||
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 322 (337)
T 3mdy_A 249 CVSGGIVEEYQLPYHDLVPSDPSYEDM-REIVCIKK-----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322 (337)
T ss_dssp BCBTTBCCCCCCTTTTTSCSSCCHHHH-HHHHTTSC-----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred cCcccccccccccHhhhcCCCCchhhh-HHHHhhhc-----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence 66664433322222222 22111111 111111112233567789999999999999999999999
Q ss_pred HHHHhcccccch
Q 042348 662 CDSLDRVNISTE 673 (686)
Q Consensus 662 ~~~L~~i~~~~~ 673 (686)
+++|+++..+.+
T Consensus 323 l~~L~~l~~~~~ 334 (337)
T 3mdy_A 323 KKTLAKMSESQD 334 (337)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHhhcc
Confidence 999999876543
No 80
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.4e-41 Score=367.82 Aligned_cols=263 Identities=23% Similarity=0.309 Sum_probs=197.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||++... .......+.+|++++++++||||+++++++...+..++|||||++|
T Consensus 154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~ 233 (446)
T 4ejn_A 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 233 (446)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSC
T ss_pred EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCC
Confidence 47999999999999865 5889999998643 2233456789999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+. ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 234 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 303 (446)
T 4ejn_A 234 ELFFHLSRE------RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-- 303 (446)
T ss_dssp BHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC--
Confidence 999999764 4689999999999999999999952 589999999999999999999999999997532111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 304 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~ 357 (446)
T 4ejn_A 304 ---------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKL 357 (446)
T ss_dssp ------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH
T ss_pred ---------------------cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHH
Confidence 112345688899999999999999999999999999999999999954322 223
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHHhcccccchhhhhccCCCC
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDSLDRVNISTEQQFMKGEEPK 683 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~L~~i~~~~~~~~~~~~~~~ 683 (686)
...+.......+..+ ...+.+++.+||+.||++|| ++.|++++----...++....+.-.|+
T Consensus 358 ~~~i~~~~~~~p~~~-------------~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp 424 (446)
T 4ejn_A 358 FELILMEEIRFPRTL-------------GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 424 (446)
T ss_dssp HHHHHHCCCCCCTTS-------------CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCS
T ss_pred HHHHHhCCCCCCccC-------------CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHHhhCcCCCC
Confidence 334443333222211 23577899999999999999 999998863222223333333444444
Q ss_pred C
Q 042348 684 F 684 (686)
Q Consensus 684 ~ 684 (686)
|
T Consensus 425 ~ 425 (446)
T 4ejn_A 425 F 425 (446)
T ss_dssp C
T ss_pred c
Confidence 4
No 81
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-41 Score=346.62 Aligned_cols=249 Identities=25% Similarity=0.463 Sum_probs=194.6
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|... ++.||||.+... ...+.+.+|++++++++||||+++++++. +..++||||+++|+|.+
T Consensus 14 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~ 88 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN 88 (307)
T ss_dssp EEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHH
T ss_pred eEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHH
Confidence 46999999999999886 678999999754 34578999999999999999999999876 45899999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC-eEEeecCcccccccccCCccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME-PHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~-~kl~DfGla~~~~~~~~~~~~ 531 (686)
++...... ..+++..++.++.|+++||+|||+..+++|+||||||+||+++.++. +||+|||+++.....
T Consensus 89 ~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------ 159 (307)
T 2eva_A 89 VLHGAEPL---PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------ 159 (307)
T ss_dssp HHHCSSSE---ECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------
T ss_pred HHhccCCC---CccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------
Confidence 99865421 35789999999999999999999965568999999999999998887 799999999754311
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
.....||..|+|||++.+..++.++|||||||++|||+||+.||........ .....
T Consensus 160 --------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~ 216 (307)
T 2eva_A 160 --------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---RIMWA 216 (307)
T ss_dssp -------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---HHHHH
T ss_pred --------------------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---HHHHH
Confidence 1123467889999999998999999999999999999999999965433221 11112
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
......+ .. .. .....+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 217 ~~~~~~~--~~-----~~-----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 217 VHNGTRP--PL-----IK-----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp HHTTCCC--CC-----BT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred HhcCCCC--Cc-----cc-----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 2221111 10 01 122357789999999999999999999999998763
No 82
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-41 Score=356.30 Aligned_cols=265 Identities=26% Similarity=0.301 Sum_probs=202.2
Q ss_pred hcccCccCceEEEEEEe------CCCceEEEEEcCCC-CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVAL------NNEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
...||+|+||.||+|.. .++..||||.+... .....+.+.+|+.+++++ +||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 45799999999999986 23568999999754 233457899999999999 89999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCcc-----------------ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec
Q 042348 444 YIPNGSLATAIHGKAGII-----------------SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG 506 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~-----------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~ 506 (686)
|+++|+|.+++....... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++
T Consensus 130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVT 206 (344)
T ss_dssp CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSGGGEEEE
T ss_pred cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEEc
Confidence 999999999998754210 01248999999999999999999999 8999999999999999
Q ss_pred CCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHH
Q 042348 507 KNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILL 586 (686)
Q Consensus 507 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ 586 (686)
.++.+||+|||+++........ .......+|..|+|||.+.+..++.++|||||||++|
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~---------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ 265 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNY---------------------VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTS---------------------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred CCCcEEeCCCccCcccccCccc---------------------eeccCccCccCccCHHHhccCCCChhHhHHHHHHHHH
Confidence 9999999999999865432210 1112334577899999998889999999999999999
Q ss_pred HHHh-CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 587 EMIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 587 ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
||+| |+.||....... . +........... .. ......+.+++.+||+.||++|||+.|++++|
T Consensus 266 el~t~g~~p~~~~~~~~-~----~~~~~~~~~~~~--~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 266 EIFSLGVNPYPGIPVDA-N----FYKLIQNGFKMD--QP---------FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp HHTTTSCCSSTTCCCSH-H----HHHHHHTTCCCC--CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHcCCCCCcccCCcHH-H----HHHHHhcCCCCC--CC---------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 9998 999996543322 1 122222211110 00 01224678899999999999999999999999
Q ss_pred hcccccchhhh
Q 042348 666 DRVNISTEQQF 676 (686)
Q Consensus 666 ~~i~~~~~~~~ 676 (686)
+.+....+++.
T Consensus 330 ~~~~~~~~~~~ 340 (344)
T 1rjb_A 330 GCQLADAEEAM 340 (344)
T ss_dssp HHHC-------
T ss_pred HHHHHHHHHHH
Confidence 99876655443
No 83
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2e-41 Score=363.01 Aligned_cols=245 Identities=20% Similarity=0.268 Sum_probs=196.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++|||||++++++.+.+..++|||||++|
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 154 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 154 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 46999999999999976 47899999986521 122345889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.++++.. .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 155 ~L~~~l~~~-------~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~- 223 (410)
T 3v8s_A 155 DLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM- 223 (410)
T ss_dssp EHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE-
T ss_pred cHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc-
Confidence 999999753 48999999999999999999999 8999999999999999999999999999986542210
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC----CCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK----PTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 224 ---------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---- 278 (410)
T 3v8s_A 224 ---------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---- 278 (410)
T ss_dssp ---------------------EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH----
T ss_pred ---------------------ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh----
Confidence 1223457888999999987655 78999999999999999999999964322
Q ss_pred HHHHHHHHHhhc--CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHH
Q 042348 605 IVQWIQLILEDR--KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK--RPSMRHVCDSL 665 (686)
Q Consensus 605 ~~~~~~~~~~~~--~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~~L 665 (686)
......+.... ...+. ++ .....+.+++.+||+.+|.+ ||++.||++|-
T Consensus 279 -~~~~~~i~~~~~~~~~p~--~~---------~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 279 -VGTYSKIMNHKNSLTFPD--DN---------DISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp -HHHHHHHHTHHHHCCCCT--TC---------CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred -hhHHHHHHhccccccCCC--cc---------cccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 22233333321 11111 00 01235778999999999988 99999999883
No 84
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.9e-41 Score=347.99 Aligned_cols=248 Identities=22% Similarity=0.308 Sum_probs=197.0
Q ss_pred cccCccCceEEEEEEeCC-C-------ceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALNN-E-------EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
..||+|+||.||+|.... + ..||+|.+........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 93 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEF 93 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEEC
Confidence 469999999999998653 2 46999999776666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC--------eEEeec
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME--------PHISDF 516 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~--------~kl~Df 516 (686)
+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++. +||+||
T Consensus 94 ~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 94 VKFGSLDTYLKKNK-----NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp CTTCBHHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred CCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 99999999998654 348999999999999999999999 89999999999999998887 999999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
|+++...... ...+|..|+|||.+.+ ..++.++|||||||++|||++|..|+
T Consensus 166 g~~~~~~~~~---------------------------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 166 GISITVLPKD---------------------------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp CSCTTTSCHH---------------------------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cccccccCcc---------------------------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 9986442111 1234667999999987 67899999999999999999965554
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
....... . ............... ...+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 219 ~~~~~~~----~-~~~~~~~~~~~~~~~-------------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 219 LSALDSQ----R-KLQFYEDRHQLPAPK-------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp TTTSCHH----H-HHHHHHTTCCCCCCS-------------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred ccccchH----H-HHHHhhccCCCCCCC-------------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 3222111 1 111122222222111 1246689999999999999999999999999876544
No 85
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-41 Score=357.16 Aligned_cols=257 Identities=25% Similarity=0.410 Sum_probs=193.4
Q ss_pred cccCccCceEEEEEEeCC----CceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEe-cCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNN----EEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS-VDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV~e~~~ 446 (686)
+.||+|+||.||+|...+ +..||||.+... .....++|.+|+.++++++||||+++++++.. .+..++||||++
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~ 174 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 174 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCT
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCC
Confidence 479999999999998642 246899998654 33456789999999999999999999998764 457899999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 175 ~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 175 HGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp TCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCHHHHHhhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 999999998654 458899999999999999999999 899999999999999999999999999998654221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
... ........+|..|+|||.+.+..++.++|||||||++|||+| |..||......+.
T Consensus 247 ~~~-------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~-- 305 (373)
T 3c1x_A 247 FDS-------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-- 305 (373)
T ss_dssp ------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--
T ss_pred ccc-------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--
Confidence 100 011123445778999999998999999999999999999999 6777754433221
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
. .......... .+ ......+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 306 ~---~~~~~~~~~~----~p--------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 306 T---VYLLQGRRLL----QP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp H---HHHHTTCCCC----CC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred H---HHHHcCCCCC----CC--------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1 1222221111 11 1122367899999999999999999999999999865444
No 86
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.1e-40 Score=343.92 Aligned_cols=259 Identities=16% Similarity=0.215 Sum_probs=204.3
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|.. .+++.||||.+.... ..+.+.+|+++++++ +|+||+++++++......++||||+ +++|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 4699999999999986 568899999986543 235688999999999 8999999999999999999999999 9999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC-----eEEeecCcccccccc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME-----PHISDFGLARLADIA 525 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~-----~kl~DfGla~~~~~~ 525 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||+++.....
T Consensus 93 ~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 93 EDLLDLCG-----RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred HHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 99998653 458999999999999999999999 89999999999999987776 999999999876533
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
...... .........||..|+|||.+.+..++.++|||||||++|||++|+.||........
T Consensus 165 ~~~~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-- 226 (298)
T 1csn_A 165 VTKQHI----------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-- 226 (298)
T ss_dssp TTCCBC----------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--
T ss_pred cccccc----------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--
Confidence 211100 00122345688899999999998999999999999999999999999965432221
Q ss_pred HHHHHHHHhhc--CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 606 VQWIQLILEDR--KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 606 ~~~~~~~~~~~--~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
......+.... .+.... .. .....+.+++.+||+.||++||++.+|++.|+++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 227 KQKYERIGEKKQSTPLREL-----CA-----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHHHHHHHHHHHHSCHHHH-----TT-----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCccHHHH-----Hh-----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 11122222111 111110 00 122468899999999999999999999999998764
No 87
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-41 Score=355.98 Aligned_cols=240 Identities=21% Similarity=0.340 Sum_probs=193.1
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||+ +|
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g 93 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GG 93 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CC
Confidence 4699999999999997 468899999986431 122357899999999999999999999999999999999999 78
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 94 ~l~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-- 162 (336)
T 3h4j_B 94 ELFDYIVEK------KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-- 162 (336)
T ss_dssp EHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--
Confidence 999998764 358999999999999999999999 899999999999999999999999999997654221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......||+.|+|||++.+..+ ++++|||||||++|||++|+.||........
T Consensus 163 ----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---- 216 (336)
T 3h4j_B 163 ----------------------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---- 216 (336)
T ss_dssp ----------------------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC----
T ss_pred ----------------------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH----
Confidence 1123467888999999988776 7899999999999999999999954322111
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. ...... ..... ......+.+++.+||+.||.+|||+.|++++
T Consensus 217 ------~--~~i~~~-~~~~p-----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 217 ------F--KKVNSC-VYVMP-----DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp ------B--CCCCSS-CCCCC-----TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ------H--HHHHcC-CCCCc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0 000000 00000 1122357789999999999999999999876
No 88
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=345.48 Aligned_cols=243 Identities=21% Similarity=0.356 Sum_probs=188.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--------------------------cchHHHHHHHHHHhccCCCCc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--------------------------QRFKEFQTEAEAIGKIRHPNI 425 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l~H~nI 425 (686)
..||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 98 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV 98 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 46999999999999865 578999999865321 113568899999999999999
Q ss_pred ceeeEEEEe--cCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCe
Q 042348 426 VSLRAYFWS--VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNI 503 (686)
Q Consensus 426 v~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NI 503 (686)
+++++++.+ .+..++||||+++|+|.+++.. ..+++.++..++.|++.||+|||+ ++|+||||||+||
T Consensus 99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-------KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNL 168 (298)
T ss_dssp CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGE
T ss_pred CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHE
Confidence 999999987 5678999999999999886542 468999999999999999999999 8999999999999
Q ss_pred eecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC---CCCcchHHH
Q 042348 504 LLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK---PTQKWDIYS 580 (686)
Q Consensus 504 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwS 580 (686)
|++.++.+||+|||+++...... .......||..|+|||.+.+.. ++.++||||
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~s 225 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSD-----------------------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWA 225 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSS-----------------------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHH
T ss_pred EECCCCCEEEecCCCcccccccc-----------------------ccccCCcCCccccChhhhccCCCCCCCchhhhHh
Confidence 99999999999999998654221 0112346788899999997655 378899999
Q ss_pred HHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHH
Q 042348 581 YGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRH 660 (686)
Q Consensus 581 lGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 660 (686)
|||++|||++|+.||.... .......+.......+. . ......+.+++.+||+.||++|||+.|
T Consensus 226 lG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~--~---------~~~~~~l~~li~~~l~~dp~~R~s~~e 289 (298)
T 2zv2_A 226 MGVTLYCFVFGQCPFMDER-----IMCLHSKIKSQALEFPD--Q---------PDIAEDLKDLITRMLDKNPESRIVVPE 289 (298)
T ss_dssp HHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCS--S---------SCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred HHHHHHHHHHCCCCCCCcc-----HHHHHHHHhcccCCCCC--c---------cccCHHHHHHHHHHhhcChhhCCCHHH
Confidence 9999999999999995432 12222333222211111 0 011235789999999999999999999
Q ss_pred HHHH
Q 042348 661 VCDS 664 (686)
Q Consensus 661 v~~~ 664 (686)
++++
T Consensus 290 ~l~h 293 (298)
T 2zv2_A 290 IKLH 293 (298)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 9764
No 89
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7.5e-41 Score=354.82 Aligned_cols=245 Identities=22% Similarity=0.297 Sum_probs=189.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHH-HhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEA-IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|+.. +++.||||++..... .....+.+|..+ ++.++||||+++++++.+.+..++||||+++
T Consensus 44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g 123 (373)
T 2r5t_A 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 123 (373)
T ss_dssp EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 478899999865432 233456777776 5778999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++......
T Consensus 124 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~- 193 (373)
T 2r5t_A 124 GELFYHLQRE------RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN- 193 (373)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC-
T ss_pred CcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccCC-
Confidence 9999999764 358899999999999999999999 899999999999999999999999999997532111
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......+||..|+|||++.+..++.++|||||||++|||++|+.||..... .+
T Consensus 194 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~ 246 (373)
T 2r5t_A 194 ----------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AE 246 (373)
T ss_dssp ----------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HH
T ss_pred ----------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HH
Confidence 112345678899999999999999999999999999999999999954322 23
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDR 667 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 667 (686)
....+.......... ....+.+++.+||+.||++||++.+.++.+.+
T Consensus 247 ~~~~i~~~~~~~~~~-------------~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~ 293 (373)
T 2r5t_A 247 MYDNILNKPLQLKPN-------------ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKS 293 (373)
T ss_dssp HHHHHHHSCCCCCSS-------------SCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHT
T ss_pred HHHHHHhcccCCCCC-------------CCHHHHHHHHHHcccCHHhCCCCCCCHHHHhC
Confidence 334444432222111 12357789999999999999998654444433
No 90
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.8e-41 Score=349.13 Aligned_cols=263 Identities=24% Similarity=0.308 Sum_probs=190.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++ |+|
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L 89 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDL 89 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBH
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCH
Confidence 36999999999999875 58899999986543 2334678899999999999999999999999999999999997 699
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++...........+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--- 163 (317)
T 2pmi_A 90 KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN--- 163 (317)
T ss_dssp HHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC---
T ss_pred HHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc---
Confidence 9998754322222458999999999999999999999 8999999999999999999999999999986532110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......+|..|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+
T Consensus 164 --------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i 221 (317)
T 2pmi_A 164 --------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--EQLKLI 221 (317)
T ss_dssp --------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHH
T ss_pred --------------------cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHH
Confidence 1123456888999999876 46899999999999999999999999654322 222222
Q ss_pred HHHHhhcCC--ccc-----ccCcccccCC-----------CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKP--MTD-----ILDPFLAHDL-----------DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~--~~~-----~~d~~l~~~~-----------~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......... +.. ...+.+.... ........+.+++.+||+.||++|||+.|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 222 FDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp HHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 222111000 000 0000000000 000122368899999999999999999999875
No 91
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=378.15 Aligned_cols=259 Identities=29% Similarity=0.469 Sum_probs=209.4
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|.+.++..||||+++.... ..++|.+|+++|++++||||+++++++.+ +..++|||||++|+|.+
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~ 350 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD 350 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHH
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHH
Confidence 46999999999999998888899999976543 35789999999999999999999999866 67899999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
+++...+ ..+++.+++.|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.......
T Consensus 351 ~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----- 418 (535)
T 2h8h_A 351 FLKGETG----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY----- 418 (535)
T ss_dssp HHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-----
T ss_pred HHhhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce-----
Confidence 9975322 358999999999999999999999 8999999999999999999999999999986542210
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......++..|+|||++....++.++|||||||++|||+| |+.||...... +....
T Consensus 419 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~ 476 (535)
T 2h8h_A 419 -----------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQ 476 (535)
T ss_dssp -----------------HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHH
T ss_pred -----------------ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 11122345678999999988899999999999999999999 99999543321 22222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccchhhhhcc
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTEQQFMKG 679 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~~~ 679 (686)
+..+ ..+. . ...+...+.+++.+||+.||++|||+.+|++.|+.+....+.++..+
T Consensus 477 i~~~-~~~~--~---------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~ 532 (535)
T 2h8h_A 477 VERG-YRMP--C---------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 532 (535)
T ss_dssp HHTT-CCCC--C---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCSSCC-
T ss_pred HHcC-CCCC--C---------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCcccCcc
Confidence 2222 1111 0 01123467899999999999999999999999999987777766544
No 92
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.7e-41 Score=340.52 Aligned_cols=244 Identities=25% Similarity=0.422 Sum_probs=187.9
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCc----cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW----QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... ++.||||.+..... ...+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 13 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGG 91 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTE
T ss_pred eeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCC
Confidence 46999999999999976 78899999865422 23467899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC---ceecCCCCCCeeecC--------CCCeEEeecC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR---YVHGDLRPSNILLGK--------NMEPHISDFG 517 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~---iiHrDlkp~NILl~~--------~~~~kl~DfG 517 (686)
+|.+++.. ..+++..+..++.|++.||+|||+ ++ |+||||||+||+++. ++.+||+|||
T Consensus 92 ~L~~~~~~-------~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 92 PLNRVLSG-------KRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EHHHHHTS-------SCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred CHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 99999864 358999999999999999999999 67 999999999999986 6789999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
+++...... .....||..|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 162 ~~~~~~~~~-------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 216 (271)
T 3dtc_A 162 LAREWHRTT-------------------------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216 (271)
T ss_dssp C--------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred ccccccccc-------------------------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 997543211 1123567889999999888899999999999999999999999965
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcc
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRV 668 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 668 (686)
..... ........... .. .. ......+.+++.+||+.||++|||+.|++++|+++
T Consensus 217 ~~~~~-----~~~~~~~~~~~-~~-----~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 217 IDGLA-----VAYGVAMNKLA-LP-----IP-----STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp SCHHH-----HHHHHHTSCCC-CC-----CC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCHHH-----HHHhhhcCCCC-CC-----CC-----cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 33211 11222222111 00 00 11224678999999999999999999999999875
No 93
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.7e-41 Score=352.70 Aligned_cols=248 Identities=25% Similarity=0.353 Sum_probs=180.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||+|+||.||+|... +++.||||++... ....+.+|+.+++++. ||||+++++++.+.+..++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 46999999999999976 5889999998653 3467889999999997 99999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC---CeEEeecCcccccccccC
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM---EPHISDFGLARLADIAEE 527 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfGla~~~~~~~~ 527 (686)
.+++... ..+++.++..|+.|++.||+|||+ ++|+||||||+|||++.++ .+||+|||+++.......
T Consensus 94 ~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 94 FERIKKK------KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp HHHHHHC------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 9999865 468999999999999999999999 8999999999999997665 799999999985542211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc--chhH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM--ELNI 605 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~--~~~~ 605 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 165 -----------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~ 221 (325)
T 3kn6_A 165 -----------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSA 221 (325)
T ss_dssp ------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCH
T ss_pred -----------------------cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccH
Confidence 112345688899999999999999999999999999999999999653321 1122
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+....+..+...... +.. .....++.+++.+||+.||++|||+.|++++
T Consensus 222 ~~~~~~i~~~~~~~~~---~~~------~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 222 VEIMKKIKKGDFSFEG---EAW------KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHHHTTTCCCCCS---HHH------HTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHHHHHcCCCCCCc---ccc------cCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 2333333222211110 000 1123467899999999999999999999765
No 94
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.3e-40 Score=348.72 Aligned_cols=256 Identities=21% Similarity=0.321 Sum_probs=194.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCc-------------
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE------------- 437 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------------- 437 (686)
..||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (332)
T 3qd2_B 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLK 91 (332)
T ss_dssp EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC----
T ss_pred eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhc
Confidence 46999999999999986 68999999986533 3345779999999999999999999999866442
Q ss_pred --------------------------------------------eeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHH
Q 042348 438 --------------------------------------------KLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLR 473 (686)
Q Consensus 438 --------------------------------------------~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 473 (686)
.++|||||++|+|.+++...... ...++..++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~ 168 (332)
T 3qd2_B 92 DESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL---EDREHGVCLH 168 (332)
T ss_dssp ----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG---GGSCHHHHHH
T ss_pred cccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc---cchhhHHHHH
Confidence 79999999999999999876432 3467778999
Q ss_pred HHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCcccccccc
Q 042348 474 IIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALN 553 (686)
Q Consensus 474 i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 553 (686)
++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++............ . .........
T Consensus 169 i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~-------~----~~~~~~~~~ 234 (332)
T 3qd2_B 169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL-------T----PMPAYATHT 234 (332)
T ss_dssp HHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-------------------------CCC
T ss_pred HHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccc-------c----ccccccccc
Confidence 99999999999999 899999999999999999999999999998765432111000 0 000011223
Q ss_pred CCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCc
Q 042348 554 STTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDK 633 (686)
Q Consensus 554 ~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 633 (686)
...||..|+|||++.+..++.++|||||||++|||++|..|+.. ............ .+. ..
T Consensus 235 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~~~~~--~~~----------~~ 295 (332)
T 3qd2_B 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDVRNLK--FPL----------LF 295 (332)
T ss_dssp SCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHHHTTC--CCH----------HH
T ss_pred ccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHhhccC--CCc----------cc
Confidence 45789999999999999999999999999999999999887621 111112211111 110 01
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 634 EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 634 ~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+.+++.+||+.||++|||+.|++++
T Consensus 296 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 296 TQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred ccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 2233457889999999999999999999874
No 95
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.2e-41 Score=354.77 Aligned_cols=244 Identities=23% Similarity=0.355 Sum_probs=184.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 136 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHH
Confidence 46999999999999986 47889999987643 3467889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC---CCCeEEeecCcccccccccCC
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK---NMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~~~~~~~~ 528 (686)
+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||++. ++.+||+|||+++......
T Consensus 137 ~~l~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-- 205 (349)
T 2w4o_A 137 DRIVEK------GYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV-- 205 (349)
T ss_dssp HHHTTC------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc--
Confidence 999765 358999999999999999999999 89999999999999975 8899999999998653211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 206 ----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~ 259 (349)
T 2w4o_A 206 ----------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ----FM 259 (349)
T ss_dssp -----------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH----HH
T ss_pred ----------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH----HH
Confidence 1123457888999999999899999999999999999999999995543221 12
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+........ .+.. ......+.+++.+||+.||++|||+.|++++
T Consensus 260 ~~~i~~~~~~~~---~~~~------~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 260 FRRILNCEYYFI---SPWW------DEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHHHTTCCCCC---TTTT------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHhCCCccC---Cchh------hhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 223333222111 1100 1123467899999999999999999999886
No 96
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.7e-41 Score=361.76 Aligned_cols=247 Identities=19% Similarity=0.248 Sum_probs=197.5
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|+... ++.||||++.... ......+.+|+.++.+++||||++++++|.+.+..++|||||++|
T Consensus 80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg 159 (437)
T 4aw2_A 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGG 159 (437)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCC
Confidence 469999999999999864 7889999986521 122345889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++.... ..+++..+..++.|++.||+|||+ ++||||||||+|||++.++.+||+|||+|+.......
T Consensus 160 ~L~~~l~~~~-----~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~- 230 (437)
T 4aw2_A 160 DLLTLLSKFE-----DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT- 230 (437)
T ss_dssp BHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC-
T ss_pred cHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC-
Confidence 9999998643 468999999999999999999999 8999999999999999999999999999976542211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
......+||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 231 ---------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~--- 286 (437)
T 4aw2_A 231 ---------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--- 286 (437)
T ss_dssp ---------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH---
T ss_pred ---------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh---
Confidence 1122357889999999986 56789999999999999999999999964332
Q ss_pred hHHHHHHHHHhhc--CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 042348 604 NIVQWIQLILEDR--KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK--RPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~--~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~~ 664 (686)
.+....+.... ...+... . .....+.+++.+||..+|++ ||+++|++++
T Consensus 287 --~~~~~~i~~~~~~~~~p~~~-----~-----~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 287 --VETYGKIMNHKERFQFPTQV-----T-----DVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --HHHHHHHHTHHHHCCCCSSC-----C-----CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --hHHHHhhhhccccccCCccc-----c-----cCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 22233333221 1111110 0 11235778999999988888 9999999987
No 97
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-41 Score=344.52 Aligned_cols=261 Identities=24% Similarity=0.361 Sum_probs=208.4
Q ss_pred ccCccCceEEEEEEeC---CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALN---NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||+|+||.||+|... ++..||||.+.... ....+++.+|++++++++||||+++++++ ..+..++||||+++++
T Consensus 17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~ 95 (287)
T 1u59_A 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP 95 (287)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEE
T ss_pred cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCC
Confidence 6999999999999854 57789999997653 34457799999999999999999999999 5567899999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 96 L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~- 166 (287)
T 1u59_A 96 LHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY- 166 (287)
T ss_dssp HHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE-
T ss_pred HHHHHHhCC-----ccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce-
Confidence 999997543 468999999999999999999999 89999999999999999999999999999865422110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~ 608 (686)
........+|..|+|||.+.+..++.++||||||+++|||+| |+.||...... +.
T Consensus 167 -------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~ 222 (287)
T 1u59_A 167 -------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EV 222 (287)
T ss_dssp -------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HH
T ss_pred -------------------eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HH
Confidence 011123345778999999988889999999999999999999 99999554322 12
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccchhhhhccC
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTEQQFMKGE 680 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~~~~ 680 (686)
...+...... . .. ......+.+++.+||+.||++||++.|++++|+++..+.......+.
T Consensus 223 ~~~i~~~~~~--~-~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~~ 282 (287)
T 1u59_A 223 MAFIEQGKRM--E-CP---------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHH 282 (287)
T ss_dssp HHHHHTTCCC--C-CC---------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred HHHHhcCCcC--C-CC---------CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCCc
Confidence 2222222111 0 01 11234688999999999999999999999999999877766555443
No 98
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.2e-41 Score=349.72 Aligned_cols=257 Identities=24% Similarity=0.379 Sum_probs=203.5
Q ss_pred cccCccCceEEEEEEe------CCCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVAL------NNEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|.. .++..||||.+.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYA 108 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeec
Confidence 4699999999999986 235789999997643 344577899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCcc------------------ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC
Q 042348 446 PNGSLATAIHGKAGII------------------SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK 507 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~ 507 (686)
++|+|.+++....... ....+++.++..++.|++.||+|||+ ++|+||||||+||+++.
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp~NIli~~ 185 (314)
T 2ivs_A 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAE 185 (314)
T ss_dssp TTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEET
T ss_pred CCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccchheEEEcC
Confidence 9999999998653210 11348999999999999999999999 89999999999999999
Q ss_pred CCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHH
Q 042348 508 NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLE 587 (686)
Q Consensus 508 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~e 587 (686)
++.+||+|||+++........ .......+|..|+|||.+.+..++.++|||||||++||
T Consensus 186 ~~~~kl~Dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 244 (314)
T 2ivs_A 186 GRKMKISDFGLSRDVYEEDSY---------------------VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244 (314)
T ss_dssp TTEEEECCCTTCEECTTTSCE---------------------ECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred CCCEEEccccccccccccccc---------------------eeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHH
Confidence 999999999999865422110 11123345778999999988889999999999999999
Q ss_pred HHh-CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 042348 588 MIS-GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLD 666 (686)
Q Consensus 588 llt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 666 (686)
|+| |+.||....... + ...+...... . .. ......+.+++.+||+.||++|||+.|++++|+
T Consensus 245 l~t~g~~p~~~~~~~~--~---~~~~~~~~~~--~-~~---------~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 245 IVTLGGNPYPGIPPER--L---FNLLKTGHRM--E-RP---------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp HHTTSCCSSTTCCGGG--H---HHHHHTTCCC--C-CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhCCCCCCCCCCHHH--H---HHHhhcCCcC--C-CC---------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 999 999996543322 1 1222221111 0 00 112246789999999999999999999999999
Q ss_pred cccc
Q 042348 667 RVNI 670 (686)
Q Consensus 667 ~i~~ 670 (686)
++..
T Consensus 308 ~~~~ 311 (314)
T 2ivs_A 308 KMMV 311 (314)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8753
No 99
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8e-41 Score=343.94 Aligned_cols=257 Identities=20% Similarity=0.280 Sum_probs=194.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++ +
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 86 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D 86 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-C
Confidence 46999999999999976 58899999986542 23346788999999999999999999999999999999999975 6
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
+.+.+.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 87 l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 155 (292)
T 3o0g_A 87 LKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--- 155 (292)
T ss_dssp HHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC---
T ss_pred HHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc---
Confidence 666665433 469999999999999999999999 899999999999999999999999999998653211
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCC-CCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......+|..|+|||++.+.. ++.++|||||||++|||++|..||........ ....
T Consensus 156 --------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~ 214 (292)
T 3o0g_A 156 --------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKR 214 (292)
T ss_dssp --------------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHH
T ss_pred --------------------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHH
Confidence 1112346688899999987765 89999999999999999999998744333222 1221
Q ss_pred HHHHHhhcCCcccccCc---------c--c----ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDP---------F--L----AHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~---------~--l----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+...... +..+.... . . ............+.+++.+||+.||++|||++|++++
T Consensus 215 i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 215 IFRLLGT--PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp HHHHHCC--CCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhCC--CChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 2111111 00000000 0 0 0000001123467799999999999999999999864
No 100
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1e-40 Score=357.70 Aligned_cols=273 Identities=20% Similarity=0.280 Sum_probs=200.8
Q ss_pred cccCcc--CceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKS--TIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+| +||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|||||++
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 110 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 110 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCC
Confidence 469999 99999999976 68999999986542 23346788999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++..... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||.+........
T Consensus 111 ~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 111 GSAKDLICTHFM----DGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp CBHHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred CCHHHHHhhhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 999999986532 458999999999999999999999 8999999999999999999999999999875532211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
... .. ........||..|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 184 ~~~-----~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~- 246 (389)
T 3gni_B 184 RQR-----VV-----------HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML- 246 (389)
T ss_dssp ECS-----CB-----------CCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-
T ss_pred ccc-----cc-----------ccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-
Confidence 000 00 011223467888999999987 57899999999999999999999999654333211
Q ss_pred HHHHHHHHhh----cC-C----------------ccccc---Ccc-----cccCCCcHHHHHHHHHHHHhccccCCCCCC
Q 042348 606 VQWIQLILED----RK-P----------------MTDIL---DPF-----LAHDLDKEDEIVSVLKIALDCVHKSPDKRP 656 (686)
Q Consensus 606 ~~~~~~~~~~----~~-~----------------~~~~~---d~~-----l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 656 (686)
.......... .. + ..+.. .+. .............+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 326 (389)
T 3gni_B 247 LEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP 326 (389)
T ss_dssp HHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSC
T ss_pred HHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCC
Confidence 1100000000 00 0 00000 000 000000111234588999999999999999
Q ss_pred CHHHHHHH--Hhccc
Q 042348 657 SMRHVCDS--LDRVN 669 (686)
Q Consensus 657 s~~ev~~~--L~~i~ 669 (686)
|+.|++++ ++.+.
T Consensus 327 ta~ell~hp~f~~~~ 341 (389)
T 3gni_B 327 SASTLLNHSFFKQIK 341 (389)
T ss_dssp CHHHHTTSGGGGGC-
T ss_pred CHHHHhcCHHHHHHh
Confidence 99999977 55554
No 101
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-42 Score=359.68 Aligned_cols=261 Identities=25% Similarity=0.346 Sum_probs=185.5
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhc--cCCCCcceeeEEEEecC----ceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGK--IRHPNIVSLRAYFWSVD----EKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~lV~e~~~ 446 (686)
+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++...+ ..++||||++
T Consensus 9 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp EEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 46999999999999875 789999998753 33567788888887 79999999999998876 6799999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHH--------ccCCCCceecCCCCCCeeecCCCCeEEeecCc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH--------EVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 518 (686)
+|+|.+++... .+++..+..++.|++.||+||| + ++|+||||||+|||++.++.+||+|||+
T Consensus 85 ~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DFg~ 154 (303)
T 3gxj_A 85 HGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp TCCHHHHHHHC-------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCCCC
T ss_pred CCCHHHHHhcc-------CcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeecCc
Confidence 99999999653 4788899999999999999999 7 8999999999999999999999999999
Q ss_pred ccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC------CCCCcchHHHHHHHHHHHHhC-
Q 042348 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR------KPTQKWDIYSYGVILLEMISG- 591 (686)
Q Consensus 519 a~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwSlGvvl~elltG- 591 (686)
++......... ........||..|+|||++.+. .++.++|||||||++|||+||
T Consensus 155 a~~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~ 215 (303)
T 3gxj_A 155 AVRHDSATDTI-------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC 215 (303)
T ss_dssp -CCEETTTTEE-------------------SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGB
T ss_pred ceeccCCCccc-------------------ccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcC
Confidence 97654322100 0011234678899999998765 344689999999999999999
Q ss_pred ---------CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 042348 592 ---------KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC 662 (686)
Q Consensus 592 ---------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 662 (686)
+.||..................... ..+..............+.+++.+||+.||++|||+.||+
T Consensus 216 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~ 289 (303)
T 3gxj_A 216 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289 (303)
T ss_dssp CBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSC------CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred CCccccceeeccccccCCCCccHHHHHHHHHHhh------cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHH
Confidence 6666443222211111111111111 1111111122235667899999999999999999999999
Q ss_pred HHHhcccccc
Q 042348 663 DSLDRVNIST 672 (686)
Q Consensus 663 ~~L~~i~~~~ 672 (686)
+.|+++....
T Consensus 290 ~~L~~l~~~~ 299 (303)
T 3gxj_A 290 KTLSQLSQQE 299 (303)
T ss_dssp HHHHC-CCC-
T ss_pred HHHHHhhhhc
Confidence 9999988644
No 102
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.1e-40 Score=338.78 Aligned_cols=246 Identities=20% Similarity=0.316 Sum_probs=198.0
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... ++.||||++.... ....+.+.+|+.++++++||||+++++++.+. +..++||||+++|
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 94 (271)
T 3kmu_A 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 94 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTC
T ss_pred HHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCC
Confidence 46999999999999986 7889999987643 33456799999999999999999999999887 6789999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC--ceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR--YVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|.+++..... ..+++..+..|+.|++.||+|||+ ++ |+||||||+||+++.++.++|+|||++.....
T Consensus 95 ~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-- 165 (271)
T 3kmu_A 95 SLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-- 165 (271)
T ss_dssp BHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred cHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence 99999987542 358999999999999999999999 77 99999999999999999999999988653211
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCC---cchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQ---KWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
....+|..|+|||.+.+..++. ++|||||||++|||++|+.||......
T Consensus 166 --------------------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-- 217 (271)
T 3kmu_A 166 --------------------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-- 217 (271)
T ss_dssp --------------------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--
T ss_pred --------------------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--
Confidence 1234677899999988765544 799999999999999999999543322
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
............ .. ... .....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 218 ---~~~~~~~~~~~~-~~-----~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 218 ---EIGMKVALEGLR-PT-----IPP-----GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ---HHHHHHHHSCCC-CC-----CCT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ---HHHHHHHhcCCC-CC-----CCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 112222222111 11 111 122357899999999999999999999999998864
No 103
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1e-40 Score=364.05 Aligned_cols=241 Identities=25% Similarity=0.378 Sum_probs=198.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 101 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG 101 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 46999999999999976 68999999986532 123467899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 102 ~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-- 170 (476)
T 2y94_A 102 ELFDYICKN------GRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 170 (476)
T ss_dssp EHHHHTTSS------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc--
Confidence 999999754 458999999999999999999999 899999999999999999999999999998654221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ..
T Consensus 171 ----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-----~~ 223 (476)
T 2y94_A 171 ----------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-----PT 223 (476)
T ss_dssp ----------------------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-----HH
T ss_pred ----------------------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-----HH
Confidence 1123467888999999988765 6899999999999999999999954322 22
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+..+....+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 224 ~~~~i~~~~~~~p~~-------------~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 224 LFKKICDGIFYTPQY-------------LNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHHHHTTCCCCCTT-------------CCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHHhcCCcCCCcc-------------CCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 333443332222111 12357789999999999999999999975
No 104
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-40 Score=353.16 Aligned_cols=246 Identities=23% Similarity=0.293 Sum_probs=191.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+++.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHH
Confidence 46999999999999976 688999999976432 2367889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC--eEEeecCcccccccccCCc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME--PHISDFGLARLADIAEETP 529 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~--~kl~DfGla~~~~~~~~~~ 529 (686)
+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++. +||+|||+++......
T Consensus 105 ~~l~~~------~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--- 172 (361)
T 3uc3_A 105 ERICNA------GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--- 172 (361)
T ss_dssp HHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC---
Confidence 999754 358999999999999999999999 89999999999999987765 9999999987432111
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCc-chHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQK-WDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||++.+..++.+ +|||||||++|||++|+.||...... ......
T Consensus 173 ---------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~ 230 (361)
T 3uc3_A 173 ---------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKT 230 (361)
T ss_dssp -----------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C-CCHHHH
T ss_pred ---------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-HHHHHH
Confidence 1123457888999999988777655 89999999999999999999654332 223334
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
++.+.......+... .....+.+++.+||+.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~-----------~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 231 IQRILSVKYSIPDDI-----------RISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHHHTTCCCCCTTS-----------CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhcCCCCCCCcC-----------CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 444443332221110 012357789999999999999999999987
No 105
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.6e-41 Score=342.67 Aligned_cols=256 Identities=29% Similarity=0.463 Sum_probs=203.1
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
..||+|+||.||+|...++..||||.+.... ...+.+.+|++++++++||||+++++++. .+..++||||+++++|.+
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 96 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVD 96 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHH
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHH
Confidence 4699999999999999888899999997654 23578999999999999999999999986 456899999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEVH 532 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 532 (686)
++....+ ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.......
T Consensus 97 ~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 164 (279)
T 1qpc_A 97 FLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY----- 164 (279)
T ss_dssp HTTSHHH----HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-----
T ss_pred HHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-----
Confidence 9975421 258999999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHHH
Q 042348 533 WEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 533 ~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 611 (686)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +....
T Consensus 165 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~ 222 (279)
T 1qpc_A 165 -----------------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQN 222 (279)
T ss_dssp -----------------ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHH
T ss_pred -----------------ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHHH
Confidence 11122345677999999988889999999999999999999 99999543221 22222
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccchhhh
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTEQQF 676 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~ 676 (686)
+....... .+ ......+.+++.+||+.||++|||+.++++.|+++......++
T Consensus 223 ~~~~~~~~----~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 275 (279)
T 1qpc_A 223 LERGYRMV----RP--------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQY 275 (279)
T ss_dssp HHTTCCCC----CC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC----
T ss_pred HhcccCCC----Cc--------ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCCC
Confidence 22221110 00 1122467899999999999999999999999999876555444
No 106
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=352.26 Aligned_cols=267 Identities=21% Similarity=0.289 Sum_probs=205.0
Q ss_pred cccCccCceEEEEEEe----CCCceEEEEEcCCCC----ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 373 FLLGKSTIGIVYKVAL----NNEEAVAVRRLGNGG----WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
+.||+|+||.||+++. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 139 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD 139 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEEC
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEee
Confidence 4699999999999987 368899999987532 22345678899999999 69999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 140 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 140 YINGGELFTHLSQR------ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCSCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred cCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 99999999999764 358999999999999999999999 899999999999999999999999999998653
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
.... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 211 ~~~~----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~ 268 (355)
T 1vzo_A 211 ADET----------------------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK 268 (355)
T ss_dssp GGGG----------------------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC
T ss_pred cCCC----------------------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc
Confidence 2211 11223457888999999875 34789999999999999999999999644322
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHHhcccccchhhh
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDSLDRVNISTEQQF 676 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~L~~i~~~~~~~~ 676 (686)
. ..............+.+. .....+.+++.+||+.||++|| ++.|++++.---...++.-.
T Consensus 269 ~-~~~~~~~~~~~~~~~~~~-------------~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~ 334 (355)
T 1vzo_A 269 N-SQAEISRRILKSEPPYPQ-------------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLA 334 (355)
T ss_dssp C-CHHHHHHHHHHCCCCCCT-------------TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHH
T ss_pred c-hHHHHHHHHhccCCCCCc-------------ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChhHhh
Confidence 2 223333333333222211 1123577899999999999999 99999988644433333333
Q ss_pred hccCCCCC
Q 042348 677 MKGEEPKF 684 (686)
Q Consensus 677 ~~~~~~~~ 684 (686)
.+...|+|
T Consensus 335 ~~~~~~p~ 342 (355)
T 1vzo_A 335 AKKVPAPF 342 (355)
T ss_dssp TTCSCCSC
T ss_pred hccCCCCC
Confidence 33333333
No 107
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.5e-40 Score=367.27 Aligned_cols=247 Identities=23% Similarity=0.263 Sum_probs=200.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||++.... ......+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg 269 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 269 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCC
Confidence 46999999999999875 68999999986532 223456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++..... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 270 ~L~~~l~~~~~----~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-- 340 (576)
T 2acx_A 270 DLKFHIYHMGQ----AGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 340 (576)
T ss_dssp BHHHHHHSSSS----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred cHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCc--
Confidence 99999986542 358999999999999999999999 899999999999999999999999999998654221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....
T Consensus 341 ----------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i 397 (576)
T 2acx_A 341 ----------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEV 397 (576)
T ss_dssp ----------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHH
T ss_pred ----------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHH
Confidence 1123468889999999998889999999999999999999999996543221 11222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-----SMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 664 (686)
...+.......... ....+.+++.+||+.||++|| ++.||++|
T Consensus 398 ~~~i~~~~~~~p~~-------------~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 398 ERLVKEVPEEYSER-------------FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHHHCCCCCCTT-------------SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHhhcccccCCcc-------------CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 22232222221111 123577899999999999999 78888876
No 108
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.8e-41 Score=347.97 Aligned_cols=258 Identities=26% Similarity=0.315 Sum_probs=204.0
Q ss_pred cccCccCceEEEEEEe------CCCceEEEEEcCCCCc-cchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVAL------NNEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
..||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+++++++ +||||+++++++...+..++||||
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 108 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 108 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEec
Confidence 4699999999999985 3467899999976532 3457799999999999 999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCc------------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeE
Q 042348 445 IPNGSLATAIHGKAGI------------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 512 (686)
+++|+|.+++...... .....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+|
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~k 185 (313)
T 1t46_A 109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITK 185 (313)
T ss_dssp CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEETTTEEE
T ss_pred CCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEcCCCCEE
Confidence 9999999999865421 011258999999999999999999999 8999999999999999999999
Q ss_pred EeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-C
Q 042348 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591 (686)
Q Consensus 513 l~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G 591 (686)
|+|||+++........ .......+|..|+|||.+.+..++.++||||||+++|||+| |
T Consensus 186 l~Dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 244 (313)
T 1t46_A 186 ICDFGLARDIKNDSNY---------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 244 (313)
T ss_dssp ECCCGGGSCTTSCTTS---------------------EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred Eccccccccccccccc---------------------eeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence 9999999865432110 11123345778999999988899999999999999999999 9
Q ss_pred CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 592 KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 592 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+.||........ ............ .. ......+.+++.+||+.||++|||+.|++++|+++..
T Consensus 245 ~~p~~~~~~~~~-----~~~~~~~~~~~~--~~---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 245 SSPYPGMPVDSK-----FYKMIKEGFRML--SP---------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp CCSSTTCCSSHH-----HHHHHHHTCCCC--CC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCcccchhH-----HHHHhccCCCCC--Cc---------ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 999965432221 112222211100 00 1122467899999999999999999999999998754
No 109
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.6e-41 Score=377.75 Aligned_cols=254 Identities=25% Similarity=0.361 Sum_probs=200.7
Q ss_pred ccCccCceEEEEEEeC---CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALN---NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|+++|++++|||||++++++.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 5899999999999864 45679999997653 3356789999999999999999999999976 56899999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++.... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.........
T Consensus 422 L~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 422 LHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp HHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred HHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 999997653 468999999999999999999999 899999999999999999999999999998654322100
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~ 608 (686)
.......++..|+|||++.+..++.++|||||||++|||+| |+.||......+ .
T Consensus 494 --------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----~ 548 (613)
T 2ozo_A 494 --------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----V 548 (613)
T ss_dssp ----------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-----H
T ss_pred --------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----H
Confidence 01112234677999999998899999999999999999998 999996543322 2
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
...+..+. .+. . ...+..++.+++.+||+.||++||++.+|++.|+.+-...+
T Consensus 549 ~~~i~~~~-~~~--~---------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 549 MAFIEQGK-RME--C---------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp HHHHHTTC-CCC--C---------CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHcCC-CCC--C---------CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 22222221 110 0 01123468899999999999999999999999998754433
No 110
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.5e-40 Score=364.90 Aligned_cols=250 Identities=20% Similarity=0.271 Sum_probs=200.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.+||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 46999999999999985 58999999986532 123467889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++...... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 271 ~L~~~l~~~~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~- 344 (543)
T 3c4z_A 271 DIRYHIYNVDED--NPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT- 344 (543)
T ss_dssp BHHHHHHTSSTT--SCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-
T ss_pred CHHHHHHHhhcc--cccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-
Confidence 999999764321 1468999999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ......
T Consensus 345 ----------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~ 401 (543)
T 3c4z_A 345 ----------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKEL 401 (543)
T ss_dssp ----------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHH
T ss_pred ----------------------ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHH
Confidence 112346788999999999999999999999999999999999999654321 122333
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM-----RHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~~~ 664 (686)
.+.+.......+.. ....+.+++.+||+.||++||++ .||.++
T Consensus 402 ~~~i~~~~~~~p~~-------------~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 402 KQRVLEQAVTYPDK-------------FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp HHHHHHCCCCCCTT-------------SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred HHHHhhcccCCCcc-------------cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 44444433222211 12357789999999999999975 566654
No 111
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=8.3e-41 Score=352.27 Aligned_cols=265 Identities=15% Similarity=0.188 Sum_probs=196.9
Q ss_pred cccCccCceEEEEEEeC----CCceEEEEEcCCCCcc-----------chHHHHHHHHHHhccCCCCcceeeEEEEe---
Q 042348 373 FLLGKSTIGIVYKVALN----NEEAVAVRRLGNGGWQ-----------RFKEFQTEAEAIGKIRHPNIVSLRAYFWS--- 434 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--- 434 (686)
..||+|+||.||+|... ++..||||++...... ....+.+|+..++.++||||+++++++..
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~ 122 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK 122 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence 46999999999999976 5678999998654321 12346788899999999999999999988
Q ss_pred -cCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC--Ce
Q 042348 435 -VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM--EP 511 (686)
Q Consensus 435 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~--~~ 511 (686)
.+..++||||+ +++|.+++... ..+++.+++.|+.||+.||+|||+ ++|+||||||+|||++.++ .+
T Consensus 123 ~~~~~~lv~e~~-~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 123 GRSYRFMVMERL-GIDLQKISGQN------GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp SCEEEEEEEECE-EEEHHHHCBGG------GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTSE
T ss_pred CCcEEEEEEecc-CCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCcE
Confidence 67789999999 99999999764 358999999999999999999999 8999999999999999887 99
Q ss_pred EEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhC
Q 042348 512 HISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISG 591 (686)
Q Consensus 512 kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG 591 (686)
||+|||+++.+........ ..........||..|+|||++.+..++.++|||||||++|||+||
T Consensus 193 kL~Dfg~a~~~~~~~~~~~----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g 256 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQ----------------YQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCG 256 (345)
T ss_dssp EECCCTTCEESSGGGCCCC----------------CCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred EEEeCCCceeccccccccc----------------chhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC
Confidence 9999999987654321100 000122345688899999999998999999999999999999999
Q ss_pred CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 592 KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 592 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+.||.................... .+........ ......++.+++.+||+.||++||++.+|++.|+++..
T Consensus 257 ~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 257 KLPWEQNLKDPVAVQTAKTNLLDE---LPQSVLKWAP----SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp SCTTGGGTTCHHHHHHHHHHHHHT---TTHHHHHHSC----TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred CCCccccccccHHHHHHHHhhccc---ccHHHHhhcc----ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 999965333322222222222111 1111110000 00123468899999999999999999999999998764
No 112
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=346.07 Aligned_cols=254 Identities=26% Similarity=0.463 Sum_probs=197.5
Q ss_pred cccCccCceEEEEEEeCC-----CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNN-----EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
+.||+|+||.||+|.... +..||||.+.... ......+.+|++++++++||||+++++++...+..++||||++
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 129 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME 129 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCC
Confidence 479999999999998653 2359999997643 3345678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 130 ~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 130 NGALDKFLREKD-----GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp TEEHHHHHHHTT-----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred CCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 999999998653 468999999999999999999999 899999999999999999999999999998654321
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
... .......+|..|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 202 ~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---- 257 (333)
T 1mqb_A 202 EAT--------------------YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---- 257 (333)
T ss_dssp -----------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----
T ss_pred ccc--------------------cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH----
Confidence 100 01112345678999999998899999999999999999999 99999543321
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
+....+..... ... . ......+.+++.+||+.||++||++.|+++.|+++...
T Consensus 258 -~~~~~~~~~~~-~~~--~---------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 258 -EVMKAINDGFR-LPT--P---------MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp -HHHHHHHTTCC-CCC--C---------TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -HHHHHHHCCCc-CCC--c---------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 22222222211 110 0 11234578899999999999999999999999987643
No 113
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.1e-40 Score=337.63 Aligned_cols=239 Identities=22% Similarity=0.335 Sum_probs=176.9
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+ +++
T Consensus 20 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 98 (275)
T 2eue_A 20 TLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNE 98 (275)
T ss_dssp ---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CEE
T ss_pred EEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CCc
Confidence 5999999999999864 68899999987542 233467899999999999999999999999999999999999 778
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 99 l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 166 (275)
T 2eue_A 99 LFDYIVQR------DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--- 166 (275)
T ss_dssp HHHHHHTS------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCcc---
Confidence 88888765 358999999999999999999999 899999999999999999999999999997554221
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||.+.+..+ +.++|||||||++|||++|+.||.... ....
T Consensus 167 ---------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~ 220 (275)
T 2eue_A 167 ---------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVL 220 (275)
T ss_dssp -----------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-----HHHH
T ss_pred ---------------------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----HHHH
Confidence 1123356788999999987665 789999999999999999999995432 2222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.......+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 221 ~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 221 FKNISNGVYTLPKF-------------LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHHTCCCCCTT-------------SCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHhCCCCCCcc-------------CCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 33333333222221 12357789999999999999999999764
No 114
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1e-40 Score=344.82 Aligned_cols=257 Identities=23% Similarity=0.370 Sum_probs=199.5
Q ss_pred cccCccCceEEEEEEe-----CCCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVAL-----NNEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~ 444 (686)
..||+|+||.||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++++... +..++||||
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 106 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEEC
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEe
Confidence 4699999999999984 35789999999754 333457899999999999999999999999876 668999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 107 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 107 LPSGSLKEYLPKNK-----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp CTTCBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 99999999996543 458999999999999999999999 8999999999999999999999999999986643
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccC-----
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIG----- 599 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~----- 599 (686)
.... ........+|..|+|||.+.+..++.++||||||+++|||+||+.|+....
T Consensus 179 ~~~~--------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 238 (302)
T 4e5w_A 179 DKEY--------------------YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLK 238 (302)
T ss_dssp TCCE--------------------EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred CCcc--------------------eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhh
Confidence 2210 011223456778999999988889999999999999999999999873221
Q ss_pred -----ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 600 -----SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 600 -----~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
................ .... . .......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 239 MIGPTHGQMTVTRLVNTLKEG-KRLP--C---------PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHCSCCGGGHHHHHHHHHHTT-CCCC--C---------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCcccccCHHHHHHHHhcc-CCCC--C---------CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0111111222222111 1110 0 0112346889999999999999999999999998763
No 115
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.9e-40 Score=345.10 Aligned_cols=257 Identities=21% Similarity=0.294 Sum_probs=194.4
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
.||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|.
T Consensus 20 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 99 (316)
T 2ac3_A 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSIL 99 (316)
T ss_dssp CCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred eecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHH
Confidence 6999999999999864 6889999999776555567899999999995 7999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC---eEEeecCcccccccccCC
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME---PHISDFGLARLADIAEET 528 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfGla~~~~~~~~~ 528 (686)
+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||+++........
T Consensus 100 ~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 100 SHIHKR------RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHhcc------CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 999764 358999999999999999999999 89999999999999998776 999999999765422210
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... .........||..|+|||++.+ ..++.++|||||||++|||++|+.||......+.
T Consensus 171 ~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 234 (316)
T 2ac3_A 171 SPI----------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234 (316)
T ss_dssp ---------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS
T ss_pred ccc----------------cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccc
Confidence 000 0011223467889999999864 4578999999999999999999999965432210
Q ss_pred ----------hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 ----------NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ----------~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........+.......+.. .. ......+.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 235 GWDRGEACPACQNMLFESIQEGKYEFPDK---DW------AHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CC----CCHHHHHHHHHHHHHCCCCCCHH---HH------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccccccchhHHHHHHHHHhccCcccCch---hc------ccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0111222222222111110 00 0112357899999999999999999999885
No 116
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.7e-40 Score=349.58 Aligned_cols=261 Identities=25% Similarity=0.341 Sum_probs=204.0
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhc--cCCCCcceeeEEEEecC----ceeEEEecc
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGK--IRHPNIVSLRAYFWSVD----EKLLIYDYI 445 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~lV~e~~ 445 (686)
...||+|+||.||+|... ++.||||.+... ....+.+|++++.. ++||||+++++++...+ ..++||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 357999999999999984 889999998653 34667889998887 79999999999998876 789999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHH--------ccCCCCceecCCCCCCeeecCCCCeEEeecC
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH--------EVSPKRYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
++|+|.+++... .+++.+++.++.|++.||+||| + ++|+||||||+||+++.++.+||+|||
T Consensus 123 ~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 123 EHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp TTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCCcHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCCEEEEECC
Confidence 999999999753 4899999999999999999999 7 899999999999999999999999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC------CCCcchHHHHHHHHHHHHhC
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK------PTQKWDIYSYGVILLEMISG 591 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDVwSlGvvl~elltG 591 (686)
+++......... ........||..|+|||.+.+.. ++.++|||||||++|||+||
T Consensus 193 ~~~~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 193 LAVRHDSATDTI-------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp TCEEEETTTTEE-------------------EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred Cceecccccccc-------------------ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence 998654322100 00123446788999999987652 33689999999999999999
Q ss_pred ----------CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 042348 592 ----------KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661 (686)
Q Consensus 592 ----------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 661 (686)
+.||............+........ ..+.+.......+....+.+++.+||+.||++|||+.||
T Consensus 254 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 327 (342)
T 1b6c_B 254 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327 (342)
T ss_dssp BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC------CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred cCcCCcccccccCccccCcCcccHHHHHHHHHHHH------hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence 7888654443333333333332221 111111111223566789999999999999999999999
Q ss_pred HHHHhccccc
Q 042348 662 CDSLDRVNIS 671 (686)
Q Consensus 662 ~~~L~~i~~~ 671 (686)
+++|+++...
T Consensus 328 ~~~L~~i~~~ 337 (342)
T 1b6c_B 328 KKTLSQLSQQ 337 (342)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999998643
No 117
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=6.8e-41 Score=347.70 Aligned_cols=254 Identities=20% Similarity=0.324 Sum_probs=191.2
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCce----eEEEec
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK----LLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~----~lV~e~ 444 (686)
..||+|+||.||+|.. .+++.||||++..... .....+.+|++++++++||||+++++++...... ++||||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~ 97 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEec
Confidence 4699999999999996 4688999999976422 2345789999999999999999999999876544 999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++|+|.++++.. ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~~g~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 98 VDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp CCEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred CCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 9999999999764 358999999999999999999999 8999999999999999999999999999986543
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.... ........||..|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 169 ~~~~--------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--- 225 (311)
T 3ork_A 169 SGNS--------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--- 225 (311)
T ss_dssp ---------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---
T ss_pred cccc--------------------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---
Confidence 2210 01122346788899999999999999999999999999999999999543321
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH-HHHhccc
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC-DSLDRVN 669 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~-~~L~~i~ 669 (686)
.................. ......+.+++.+||+.||++||++.+++ +.+.++.
T Consensus 226 --~~~~~~~~~~~~~~~~~~---------~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 226 --SVAYQHVREDPIPPSARH---------EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp --HHHHHHHHCCCCCHHHHS---------TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred --HHHHHHhcCCCCCccccc---------CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 122222222211111000 01223577899999999999999766554 5555543
No 118
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1e-40 Score=351.43 Aligned_cols=241 Identities=24% Similarity=0.434 Sum_probs=194.3
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|.. .+++.||||++.... ....+++.+|++++++++||||+++++++...+..++||||+. |
T Consensus 60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g 138 (348)
T 1u5q_A 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G 138 (348)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-C
Confidence 4699999999999986 468899999986542 2234678999999999999999999999999999999999997 6
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 139 ~l~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 139 SASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp EHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 8888886543 468999999999999999999999 89999999999999999999999999999754311
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
....||..|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 208 ------------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~----- 258 (348)
T 1u5q_A 208 ------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----- 258 (348)
T ss_dssp ------------------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----
T ss_pred ------------------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----
Confidence 1245788899999874 56789999999999999999999999954322
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
...+..+.....+. ... ......+.+++.+||+.||++|||+.|++++.
T Consensus 259 ~~~~~~~~~~~~~~--~~~---------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 259 MSALYHIAQNESPA--LQS---------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp HHHHHHHHHSCCCC--CCC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred HHHHHHHHhcCCCC--CCC---------CCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 12223333332211 101 01123577899999999999999999998763
No 119
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=357.69 Aligned_cols=246 Identities=17% Similarity=0.214 Sum_probs=195.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||+++.. +++.||||++.... ....+.+.+|..++.+++||||+++++++.+.+..++||||+++|
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg 146 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGG 146 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCC
Confidence 46999999999999975 68999999986532 123345889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++.......
T Consensus 147 ~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~- 217 (412)
T 2vd5_A 147 DLLTLLSKFG-----ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT- 217 (412)
T ss_dssp BHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC-
T ss_pred cHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCCCc-
Confidence 9999997643 358999999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc-------CCCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-------VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
......+||..|+|||++. ...++.++|||||||++|||++|+.||......
T Consensus 218 ---------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~ 276 (412)
T 2vd5_A 218 ---------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276 (412)
T ss_dssp ---------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ---------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH
Confidence 1122357888999999986 356899999999999999999999999653322
Q ss_pred chhHHHHHHHHHhhc--CCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCC---CCHHHHHHH
Q 042348 602 ELNIVQWIQLILEDR--KPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR---PSMRHVCDS 664 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~--~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~ev~~~ 664 (686)
+....+.... ...+. .+ .. ...++.+++.+||+ +|++| |+++|+++|
T Consensus 277 -----~~~~~i~~~~~~~~~p~-~~----~~-----~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 277 -----ETYGKIVHYKEHLSLPL-VD----EG-----VPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -----HHHHHHHTHHHHCCCC---------C-----CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred -----HHHHHHHhcccCcCCCc-cc----cC-----CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 2223333211 11111 00 01 12357789999999 99998 689999877
No 120
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6e-41 Score=350.75 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=203.1
Q ss_pred cccCccCceEEEEEEe-----CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEe--cCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS--VDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lV~e~~ 445 (686)
..||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 108 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECC
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeec
Confidence 4699999999999984 3578999999987766666789999999999999999999999874 45688999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++|+|.+++.... ..+++..++.|+.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 109 PSGCLRDFLQRHR-----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp TTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred CCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 9999999998643 358999999999999999999999 89999999999999999999999999999865432
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc---
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME--- 602 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~--- 602 (686)
... ........+|..|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 181 ~~~--------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~ 240 (327)
T 3lxl_A 181 KDY--------------------YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM 240 (327)
T ss_dssp CSE--------------------EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH
T ss_pred Ccc--------------------ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh
Confidence 210 011223456778999999988889999999999999999999999985422110
Q ss_pred -------hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 603 -------LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 603 -------~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
......... ........ ........+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~~~-----------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 241 MGCERDVPALSRLLEL-LEEGQRLP-----------APPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp CC----CCHHHHHHHH-HHTTCCCC-----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred cccccccccHHHHHHH-hhcccCCC-----------CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 001111111 11111100 0112234688999999999999999999999999998643
No 121
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.8e-40 Score=356.09 Aligned_cols=246 Identities=20% Similarity=0.343 Sum_probs=188.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEe----cCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWS----VDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~----~~~~~lV~e~~~ 446 (686)
.+||+|+||.||++... +++.||||++.. ...+.+|+.++.++ +||||+++++++.. .+..++|||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 36999999999999876 588999999853 24678899987554 89999999999876 566899999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC---CCCeEEeecCcccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK---NMEPHISDFGLARLAD 523 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~~~ 523 (686)
+|+|.+++..... ..+++.++..|+.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||+++...
T Consensus 143 gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 143 GGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp SEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred CCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 9999999987532 458999999999999999999999 89999999999999997 7899999999998543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... ......||..|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 216 ~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 271 (400)
T 1nxk_A 216 SHN------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 271 (400)
T ss_dssp -----------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS
T ss_pred CCC------------------------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 211 11234678889999999999999999999999999999999999965433221
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. ......+..+...... +.. .....++.+++.+||+.||++|||+.|++++
T Consensus 272 ~-~~~~~~i~~~~~~~~~---~~~------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 272 S-PGMKTRIRMGQYEFPN---PEW------SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp C-CSHHHHHHHTCCCCCT---TTT------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred c-HHHHHHHHcCcccCCC---ccc------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 0011222222211111 100 1123467899999999999999999999986
No 122
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.1e-40 Score=335.17 Aligned_cols=244 Identities=21% Similarity=0.295 Sum_probs=198.0
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|.... +..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (277)
T 3f3z_A 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF 94 (277)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHH
Confidence 469999999999998764 6789999987765556788999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee---cCCCCeEEeecCcccccccccCC
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++.......
T Consensus 95 ~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~-- 163 (277)
T 3f3z_A 95 ERVVHK------RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-- 163 (277)
T ss_dssp HHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS--
T ss_pred HHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc--
Confidence 998764 458999999999999999999999 899999999999999 788999999999997654221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||.+.+. ++.++||||||+++|||++|+.||...... ..
T Consensus 164 ----------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~ 215 (277)
T 3f3z_A 164 ----------------------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS-----EV 215 (277)
T ss_dssp ----------------------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH
T ss_pred ----------------------chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH-----HH
Confidence 11234577889999998654 899999999999999999999999553321 22
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.......+... . ......+.+++.+||+.||++|||+.|++++
T Consensus 216 ~~~~~~~~~~~~~~~---~------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 216 MLKIREGTFTFPEKD---W------LNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHHHCCCCCCHHH---H------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHhCCCCCCchh---h------hcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 233333322211100 0 0122467899999999999999999999864
No 123
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.9e-40 Score=339.83 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=197.7
Q ss_pred cccCccCceEEEEEEeCC----CceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEe-cCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNN----EEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS-VDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|...+ ...||+|.+... .....+.+.+|+.++++++||||+++++++.. .+..++||||++
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~ 110 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 110 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCT
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCC
Confidence 469999999999998643 236899998764 33445779999999999999999999998654 567899999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 111 ~~~L~~~l~~~~-----~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 111 HGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp TCBHHHHHHCTT-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred CCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 999999997654 458999999999999999999999 899999999999999999999999999998654322
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
... ........+|..|+|||.+.+..++.++||||||+++|||++ |..||......+ .
T Consensus 183 ~~~-------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~ 241 (298)
T 3f66_A 183 YYS-------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--I 241 (298)
T ss_dssp GCB-------------------C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--H
T ss_pred hhc-------------------cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--H
Confidence 110 011223456778999999988899999999999999999999 555554332222 1
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
........... .+ ......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 242 ---~~~~~~~~~~~----~~--------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 242 ---TVYLLQGRRLL----QP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp ---HHHHHTTCCCC----CC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---HHHHhcCCCCC----CC--------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 12222222111 01 01123578899999999999999999999999997643
No 124
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-40 Score=340.40 Aligned_cols=256 Identities=22% Similarity=0.367 Sum_probs=200.1
Q ss_pred cccCccCceEEEEEEeCC----CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCce-eEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNN----EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK-LLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~lV~e~~~ 446 (686)
+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+.. ++||||+.
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~ 106 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMC 106 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCT
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEeccc
Confidence 579999999999998543 2369999987643 34457799999999999999999999999877665 99999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 107 ~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 107 HGDLLQFIRSPQ-----RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp TCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred CCCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999998754 468999999999999999999999 899999999999999999999999999998654321
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
... ........+|..|+|||.+.+..++.++||||||+++|||++|..|+...... ....
T Consensus 179 ~~~-------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~ 238 (298)
T 3pls_A 179 YYS-------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLT 238 (298)
T ss_dssp GGC-------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHH
T ss_pred ccc-------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHH
Confidence 100 01122345678899999999999999999999999999999966665332221 1111
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
......... .. . ......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 239 ---~~~~~~~~~-~~--~---------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 239 ---HFLAQGRRL-PQ--P---------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp ---HHHHTTCCC-CC--C---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHhhcCCCC-CC--C---------ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 122222111 00 0 01123578999999999999999999999999997643
No 125
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.5e-40 Score=348.79 Aligned_cols=257 Identities=24% Similarity=0.380 Sum_probs=202.6
Q ss_pred cccCccCceEEEEEEeC--------CCceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEE
Q 042348 373 FLLGKSTIGIVYKVALN--------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 442 (686)
..||+|+||.||+|... ++..||||++.... ....+++.+|+++++++ +||||+++++++...+..++||
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 120 (334)
T 2pvf_A 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120 (334)
T ss_dssp EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEE
T ss_pred eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEE
Confidence 46999999999999863 46789999997643 33456789999999999 8999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeE
Q 042348 443 DYIPNGSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPH 512 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 512 (686)
||+++|+|.+++...... .....+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+|
T Consensus 121 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~k 197 (334)
T 2pvf_A 121 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMK 197 (334)
T ss_dssp ECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEE
T ss_pred ECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEEcCCCCEE
Confidence 999999999999865421 011348999999999999999999999 8999999999999999999999
Q ss_pred EeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-C
Q 042348 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-G 591 (686)
Q Consensus 513 l~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G 591 (686)
|+|||+++........ .......+|..|+|||++.+..++.++|||||||++|||++ |
T Consensus 198 L~Dfg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 256 (334)
T 2pvf_A 198 IADFGLARDINNIDYY---------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256 (334)
T ss_dssp ECCCTTCEECTTTSSE---------------------ECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred Eccccccccccccccc---------------------cccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCC
Confidence 9999999865422110 11123345678999999988889999999999999999999 9
Q ss_pred CCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 592 KLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 592 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+.||..... .+....+...... . .. ......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 257 ~~p~~~~~~-----~~~~~~~~~~~~~-~--~~---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 257 GSPYPGIPV-----EELFKLLKEGHRM-D--KP---------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp CCSSTTCCH-----HHHHHHHHHTCCC-C--CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCcCCH-----HHHHHHHhcCCCC-C--CC---------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999954322 1222222222111 0 00 1122367889999999999999999999999999864
No 126
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=356.27 Aligned_cols=266 Identities=20% Similarity=0.250 Sum_probs=206.2
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecC--ceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD--EKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV~e~~~~g 448 (686)
..||+|+||.||+|.... ++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||+++|
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g 94 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTE
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCC
Confidence 469999999999999764 8899999997543 233567889999999999999999999998765 679999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee----cCCCCeEEeecCccccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL----GKNMEPHISDFGLARLADI 524 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGla~~~~~ 524 (686)
+|.+++...... ..+++..++.++.|++.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++....
T Consensus 95 ~L~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 95 SLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp EHHHHTTSGGGT---TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred CHHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 999999865321 348999999999999999999999 899999999999999 7778899999999986543
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC--------CCCCCcchHHHHHHHHHHHHhCCCCcc
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--------RKPTQKWDIYSYGVILLEMISGKLPMI 596 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDVwSlGvvl~elltG~~P~~ 596 (686)
.. ......||..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 169 ~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~ 224 (396)
T 4eut_A 169 DE------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224 (396)
T ss_dssp GG------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEE
T ss_pred CC------------------------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 21 1123457888999998764 457889999999999999999999996
Q ss_pred ccCccchhHHHHHHHHHhhcCCc-cccc----C------cccc-cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 597 QIGSMELNIVQWIQLILEDRKPM-TDIL----D------PFLA-HDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~----d------~~l~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....... ..+.+..+..+..+. ...+ + ..+. ...-.......+.+++.+||+.||++||++.|+++.
T Consensus 225 ~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 225 PFEGPRR-NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp CTTCTTT-CHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred CCCcccc-hHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 5443222 223344444332210 0000 0 0000 011124566778899999999999999999999999
Q ss_pred Hhccc
Q 042348 665 LDRVN 669 (686)
Q Consensus 665 L~~i~ 669 (686)
++++.
T Consensus 304 l~~il 308 (396)
T 4eut_A 304 TSDIL 308 (396)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98864
No 127
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.8e-40 Score=342.29 Aligned_cols=246 Identities=21% Similarity=0.272 Sum_probs=199.1
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCCc------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEec
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
...||+|+||.||+|... +++.||||.+..... ...+++.+|+.++++++||||+++++++.+.+..++||||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEc
Confidence 346999999999999976 588999999865322 1356799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC----CeEEeecCccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM----EPHISDFGLAR 520 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DfGla~ 520 (686)
+++++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|||+++
T Consensus 97 ~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 97 VSGGELFDFLAQK------ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp CCSCBHHHHHHTC------SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred CCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 9999999999764 358999999999999999999999 8999999999999999887 79999999997
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 223 (321)
T 2a2a_A 168 EIEDGV------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223 (321)
T ss_dssp ECCTTC------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred ecCccc------------------------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH
Confidence 654221 11234578889999999988999999999999999999999999954322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+....+....... ++..... ....+.+++.+||+.||++|||+.|++++
T Consensus 224 -----~~~~~~i~~~~~~~----~~~~~~~-----~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 224 -----QETLANITSVSYDF----DEEFFSH-----TSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp -----HHHHHHHHTTCCCC----CHHHHTT-----CCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred -----HHHHHHHHhccccc----Chhhhcc-----cCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 12223332222111 1111111 12357899999999999999999999986
No 128
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=351.21 Aligned_cols=262 Identities=16% Similarity=0.197 Sum_probs=203.3
Q ss_pred cccCccCceEEEEEEeCC---------CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcce---------------e
Q 042348 373 FLLGKSTIGIVYKVALNN---------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVS---------------L 428 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~---------------l 428 (686)
..||+|+||.||+|.... ++.||||.+... +.+.+|++++++++||||++ +
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~ 122 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTC 122 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCC
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccch
Confidence 469999999999998764 789999998653 46889999999999999988 6
Q ss_pred eEEEEe-cCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC
Q 042348 429 RAYFWS-VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK 507 (686)
Q Consensus 429 ~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~ 507 (686)
++++.. .+..++||||+ +++|.+++..... ..+++.+++.|+.||+.||+|||+ ++|+||||||+|||++.
T Consensus 123 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 123 MGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK----HVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFVDP 194 (352)
T ss_dssp CEEEEETTTEEEEEEECC-CEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEEET
T ss_pred hhccccCCcEEEEEecCC-CcCHHHHHHhCCc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEEcC
Confidence 777776 67789999999 9999999986522 469999999999999999999999 89999999999999999
Q ss_pred CC--CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHH
Q 042348 508 NM--EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVIL 585 (686)
Q Consensus 508 ~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl 585 (686)
++ .+||+|||+++.+......... .........||..|+|||.+.+..++.++|||||||++
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 258 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAY----------------VEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCM 258 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCC----------------CTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred CCCceEEEecCcceeeccCCCccccc----------------cccccccccCCccccCHHHHccCCCCchhhHHHHHHHH
Confidence 98 8999999999876543221100 00112334678899999999998999999999999999
Q ss_pred HHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 586 LEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 586 ~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
|||++|+.||.........+............ ...++... .......+.+++.+||+.||++|||+.||++.|
T Consensus 259 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 331 (352)
T 2jii_A 259 LKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPG---PFVGPCGH----WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNL 331 (352)
T ss_dssp HHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCC---CEECTTSC----EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred HHHHhCCCCcccCCcCHHHHHHHHHhccCChh---hhhhhccc----cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHH
Confidence 99999999997654333333333333322221 11111100 001124688999999999999999999999999
Q ss_pred hcccc
Q 042348 666 DRVNI 670 (686)
Q Consensus 666 ~~i~~ 670 (686)
+++..
T Consensus 332 ~~~~~ 336 (352)
T 2jii_A 332 EALLQ 336 (352)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 129
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4e-40 Score=336.37 Aligned_cols=240 Identities=25% Similarity=0.377 Sum_probs=194.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... ++..||||++.... ......+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 94 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 94 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCC
Confidence 46999999999999876 46789999985432 122456889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~l~~~l~~~------~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~-- 163 (279)
T 3fdn_A 95 TVYRELQKL------SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 163 (279)
T ss_dssp EHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCccc--
Confidence 999999764 358999999999999999999999 899999999999999999999999999986433211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....||..|+|||.+.+..++.++||||||+++|||++|+.||..... ...
T Consensus 164 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~ 215 (279)
T 3fdn_A 164 -----------------------RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QET 215 (279)
T ss_dssp ---------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH
T ss_pred -----------------------ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHH
Confidence 1234567889999999998999999999999999999999999954322 222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.......++. ....+.+++.+||+.||++|||+.|++++
T Consensus 216 ~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 216 YKRISRVEFTFPDF-------------VTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHTCCCCCTT-------------SCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHhCCCCCCCc-------------CCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 23333322222211 12357789999999999999999999987
No 130
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-40 Score=346.13 Aligned_cols=258 Identities=22% Similarity=0.355 Sum_probs=201.2
Q ss_pred cccCccCceEEEEEEeC-----CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEec--CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-----NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~e~ 444 (686)
..||+|+||.||++.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+. ...++||||
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 116 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECC
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEec
Confidence 46999999999998753 57889999997653 23456799999999999999999999999874 567999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++|+|.+++... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 117 ~~~~~L~~~l~~~-------~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 117 VPLGSLRDYLPRH-------SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp CTTCBHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred ccCCcHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 9999999999753 48999999999999999999999 8999999999999999999999999999986643
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc--
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME-- 602 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~-- 602 (686)
.... ........+|..|+|||.+.+..++.++||||||+++|||+||+.||.......
T Consensus 187 ~~~~--------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~ 246 (318)
T 3lxp_A 187 GHEY--------------------YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE 246 (318)
T ss_dssp TCSE--------------------EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred cccc--------------------cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh
Confidence 2110 011223456778999999988889999999999999999999999995432110
Q ss_pred --------hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccc
Q 042348 603 --------LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIST 672 (686)
Q Consensus 603 --------~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 672 (686)
..... +........... . .......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 247 ~~~~~~~~~~~~~-~~~~~~~~~~~~------~-----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 247 LIGIAQGQMTVLR-LTELLERGERLP------R-----PDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp HHCSCCHHHHHHH-HHHHHHTTCCCC------C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hhcccccchhHHH-HHHHHhcccCCC------C-----CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 01111 111111111100 0 0112346889999999999999999999999999886433
No 131
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.1e-40 Score=337.55 Aligned_cols=250 Identities=23% Similarity=0.357 Sum_probs=198.1
Q ss_pred cccCccCceEEEEEEeCC----CceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALNN----EEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|.... +..||||.+... .....+.+.+|+.++++++||||+++++++.+ +..++||||+++
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 96 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPY 96 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCC
Confidence 469999999999998643 346999999765 33445779999999999999999999999864 567899999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
++|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 97 ~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 97 GELGHYLERNK-----NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp CBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred CCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 99999997643 458999999999999999999999 8999999999999999999999999999986542211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~ 606 (686)
.......+|..|+|||.+.+..++.++||||||+++|||+| |+.||......+ ..
T Consensus 169 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~ 224 (281)
T 3cc6_A 169 ----------------------YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VI 224 (281)
T ss_dssp --------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HH
T ss_pred ----------------------cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HH
Confidence 01122345678999999988889999999999999999998 999996443322 22
Q ss_pred HHHHHHHhhcC-CcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 607 QWIQLILEDRK-PMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 607 ~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
........ +... .....+.+++.+||+.||++|||+.|++++|+++...
T Consensus 225 ---~~~~~~~~~~~~~-------------~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 225 ---GVLEKGDRLPKPD-------------LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp ---HHHHHTCCCCCCT-------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHhcCCCCCCCC-------------CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 12222211 1111 1123578899999999999999999999999998654
No 132
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=346.10 Aligned_cols=254 Identities=25% Similarity=0.363 Sum_probs=195.6
Q ss_pred cccCccCceEEEEEEeC-CCc----eEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEE----AVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|... +++ .||+|.+... .....+++.+|+.++++++||||+++++++.... .++|+||++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~ 99 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMP 99 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCS
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecC
Confidence 46999999999999864 344 3578877543 3345678999999999999999999999998754 889999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..++.|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 100 FGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp SCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 999999998754 458999999999999999999999 899999999999999999999999999998654322
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
.. .......+|..|+|||.+.+..++.++|||||||++|||++ |+.||......+ +
T Consensus 172 ~~---------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~ 228 (327)
T 3lzb_A 172 KE---------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--I 228 (327)
T ss_dssp -----------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--H
T ss_pred cc---------------------ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--H
Confidence 11 11122345778999999999999999999999999999999 999996543332 1
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
. ..+... ..... . ......+.+++.+||+.||++||++.|+++.|+++.....
T Consensus 229 ~---~~~~~~-~~~~~--~---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 281 (327)
T 3lzb_A 229 S---SILEKG-ERLPQ--P---------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQ 281 (327)
T ss_dssp H---HHHHTT-CCCCC--C---------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHH
T ss_pred H---HHHHcC-CCCCC--C---------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcC
Confidence 1 112111 11110 0 1122357889999999999999999999999999875543
No 133
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-40 Score=340.73 Aligned_cols=254 Identities=24% Similarity=0.444 Sum_probs=189.8
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|.... .||||.++... ....+.+.+|++++++++||||+++++++ ..+..++||||+++++|
T Consensus 30 ~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L 106 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 106 (289)
T ss_dssp EEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEH
T ss_pred eEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcH
Confidence 469999999999998653 59999986543 33456799999999999999999999965 55678999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 107 ~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-- 176 (289)
T 3og7_A 107 YHHLHASE-----TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS-- 176 (289)
T ss_dssp HHHHTTC--------CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred HHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccccccc--
Confidence 99997654 468999999999999999999999 89999999999999999999999999999754321110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.......||..|+|||.+. +..++.++||||||+++|||++|+.||......+ .
T Consensus 177 -------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~ 233 (289)
T 3og7_A 177 -------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----Q 233 (289)
T ss_dssp --------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH----H
T ss_pred -------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH----H
Confidence 1112345788899999886 5678889999999999999999999996543322 1
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
......... .... ... . .......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 234 ~~~~~~~~~-~~~~-~~~-~-----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 234 IIEMVGRGS-LSPD-LSK-V-----RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHTS-CCCC-TTS-S-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHhcccc-cCcc-hhh-c-----cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 122222221 1111 000 0 01223468899999999999999999999999998764
No 134
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.6e-40 Score=338.70 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=194.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||.+..... ...+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGV 119 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCE
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCC
Confidence 46999999999999975 688999999875422 22467899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 120 ~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 189 (309)
T 2h34_A 120 DLAAMLRRQ------GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL- 189 (309)
T ss_dssp EHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc-
Confidence 999999764 358999999999999999999999 8999999999999999999999999999975542211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.......+|..|+|||.+.+..++.++||||||+++|||++|+.||..... ..
T Consensus 190 ---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~ 242 (309)
T 2h34_A 190 ---------------------TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL------SV 242 (309)
T ss_dssp ----------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH------HH
T ss_pred ---------------------ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH------HH
Confidence 111234578889999999988999999999999999999999999954221 12
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHhcccccc
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRP-SMRHVCDSLDRVNIST 672 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ev~~~L~~i~~~~ 672 (686)
+........+......+ .....+.+++.+||+.||++|| +++++++.|++.....
T Consensus 243 ~~~~~~~~~~~~~~~~~---------~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 243 MGAHINQAIPRPSTVRP---------GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHHHHHSCCCCGGGTST---------TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred HHHHhccCCCCccccCC---------CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 22222222221111111 1123577899999999999999 9999999999876443
No 135
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.8e-40 Score=342.96 Aligned_cols=259 Identities=20% Similarity=0.318 Sum_probs=195.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 117 (310)
T 2wqm_A 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG 117 (310)
T ss_dssp EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSC
T ss_pred EeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCC
Confidence 46999999999999864 6889999998753 2334567899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++...... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 118 ~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 191 (310)
T 2wqm_A 118 DLSRMIKHFKKQ--KRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT- 191 (310)
T ss_dssp BHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CHHHHHHHhccc--ccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc-
Confidence 999999752110 1468999999999999999999999 8999999999999999999999999999876542211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ....
T Consensus 192 ----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~ 246 (310)
T 2wqm_A 192 ----------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSL 246 (310)
T ss_dssp -----------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHH
T ss_pred ----------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHH
Confidence 112345677899999999889999999999999999999999999543222 2222
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
...+.....+ .... ......+.+++.+||+.||++|||+.+|++.|+++.+...
T Consensus 247 ~~~~~~~~~~--~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 247 CKKIEQCDYP--PLPS---------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp HHHHHTTCSC--CCCT---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHhhcccCC--CCcc---------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 3333222111 1100 1122357899999999999999999999999999986544
No 136
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=342.47 Aligned_cols=240 Identities=21% Similarity=0.197 Sum_probs=187.8
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
...||+|+||+||+|... +++.||||++.... .....++..|+..+.++ +||||+++++++.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 346999999999999986 68999999986532 23334566677666666 8999999999999999999999999 7
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
++|.+++.... ..++|..+..|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 141 ~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 141 PSLQQHCEAWG-----ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp CBHHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 79999987654 469999999999999999999999 899999999999999999999999999987553221
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......||..|+|||++.+ .++.++|||||||++|||++|..|+.... .
T Consensus 212 -----------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~--- 260 (311)
T 3p1a_A 212 -----------------------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----G--- 260 (311)
T ss_dssp --------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----H---
T ss_pred -----------------------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----H---
Confidence 1123457888999999876 78999999999999999999977663211 0
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ ..+..... ....+.+++.+||+.||++|||+.|++++
T Consensus 261 -~~~~~~~~------~~~~~~~~-----~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 261 -WQQLRQGY------LPPEFTAG-----LSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -HHHHTTTC------CCHHHHTT-----SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -HHHHhccC------CCcccccC-----CCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 11111111 11111111 22468899999999999999999999864
No 137
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=338.96 Aligned_cols=243 Identities=22% Similarity=0.373 Sum_probs=177.0
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (278)
T 3cok_A 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG 96 (278)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCC
Confidence 4699999999999987 468899999986432 122467899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++........
T Consensus 97 ~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 167 (278)
T 3cok_A 97 EMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE- 167 (278)
T ss_dssp EHHHHHHTCS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred cHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC-
Confidence 9999998654 468999999999999999999999 8999999999999999999999999999976532111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||.+.+..++.++||||||+++|||++|+.||........
T Consensus 168 ----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----- 220 (278)
T 3cok_A 168 ----------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----- 220 (278)
T ss_dssp ----------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------
T ss_pred ----------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----
Confidence 11124567889999999988899999999999999999999999954332211
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....... +..... .....+.+++.+||+.||++|||+.|++++
T Consensus 221 ~~~~~~~--------~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 221 LNKVVLA--------DYEMPS-----FLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ---CCSS--------CCCCCT-----TSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHhhc--------ccCCcc-----ccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0000000 000111 122357799999999999999999999875
No 138
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.2e-40 Score=342.95 Aligned_cols=258 Identities=21% Similarity=0.348 Sum_probs=192.7
Q ss_pred hcccCccCceEEEEEEeC----CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCc-----eeE
Q 042348 372 AFLLGKSTIGIVYKVALN----NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE-----KLL 440 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-----~~l 440 (686)
...||+|+||.||+|... .+..||||.+... .....+.+.+|+.++++++||||+++++++...+. .++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 346999999999999764 2457999998754 23345679999999999999999999999987653 499
Q ss_pred EEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 441 IYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 441 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
||||+++|+|.+++...........+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~~ 195 (313)
T 3brb_A 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSK 195 (313)
T ss_dssp EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEECSCSCC-
T ss_pred EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEeecCcce
Confidence 99999999999999643322222569999999999999999999999 899999999999999999999999999998
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccC
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIG 599 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~ 599 (686)
........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 196 ~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 254 (313)
T 3brb_A 196 KIYSGDYY---------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254 (313)
T ss_dssp ------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred eccccccc---------------------CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 65432110 01122345678999999998899999999999999999999 889985543
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
... . ........... .. ......+.+++.+||+.||++|||+.+++++|+++..
T Consensus 255 ~~~--~---~~~~~~~~~~~-------~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 255 NHE--M---YDYLLHGHRLK-------QP-----EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp GGG--H---HHHHHTTCCCC-------CB-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH--H---HHHHHcCCCCC-------CC-----ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 322 1 22222221110 00 1122468899999999999999999999999998754
No 139
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.8e-40 Score=339.10 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=204.3
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|.... +..||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++++|.
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 97 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 469999999999999864 7889999997643 34578999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 98 ~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---- 166 (288)
T 3kfa_A 98 DYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY---- 166 (288)
T ss_dssp HHHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS----
T ss_pred HHHHhccc----CCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc----
Confidence 99986542 468999999999999999999999 8999999999999999999999999999986542211
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
.......+|..|+|||.+.+..++.++||||||+++|+|++ |..||....... .. .
T Consensus 167 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~---~ 223 (288)
T 3kfa_A 167 ------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VY---E 223 (288)
T ss_dssp ------------------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HH---H
T ss_pred ------------------ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---H
Confidence 11122345677999999988899999999999999999999 999995543222 11 1
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
..... .... .. ......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 224 ~~~~~-~~~~--~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 224 LLEKD-YRME--RP---------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHTT-CCCC--CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcc-CCCC--CC---------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 11111 1100 00 11224678999999999999999999999999987643
No 140
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.8e-40 Score=348.46 Aligned_cols=245 Identities=20% Similarity=0.274 Sum_probs=194.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||++... +++.||||.+..... ...+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 46999999999999876 588999999965432 346788999888 799999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-C---CeEEeecCccccccccc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-M---EPHISDFGLARLADIAE 526 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-~---~~kl~DfGla~~~~~~~ 526 (686)
.+++... ..+++.++..++.||+.||+|||+ ++|+||||||+|||+.++ + .+||+|||+++......
T Consensus 104 ~~~i~~~------~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 104 LDKILRQ------KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp HHHHHTC------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 9999765 358999999999999999999999 899999999999998533 3 49999999998654221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
. ......||..|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 175 ~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~ 229 (342)
T 2qr7_A 175 G-----------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPE 229 (342)
T ss_dssp C-----------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHH
T ss_pred C-----------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHH
Confidence 1 11234678889999999887789999999999999999999999964322 2223
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+....+..+......... ......+.+++.+||+.||++|||+.|++++
T Consensus 230 ~~~~~i~~~~~~~~~~~~---------~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 230 EILARIGSGKFSLSGGYW---------NSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHHHHHHHCCCCCCSTTT---------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHccCCcccCcccc---------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 334444433322211100 1122357789999999999999999999876
No 141
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=345.95 Aligned_cols=267 Identities=23% Similarity=0.325 Sum_probs=201.0
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEe----cCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS----VDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lV~e~~~~ 447 (686)
..||+|+||.||++.. .+++.||||++........+.+.+|++++++++||||+++++++.. ....++||||+++
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~ 114 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKR 114 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTT
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCC
Confidence 4699999999999997 4688999999876655667789999999999999999999999973 3467999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++...... ...+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 115 ~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 115 GTLWNEIERLKDK--GNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp CBHHHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred CcHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 9999999763111 1468999999999999999999999 8999999999999999999999999999875532211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC---CCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK---PTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.... ...........||..|+|||.+.+.. ++.++|||||||++|||++|+.||.........
T Consensus 190 ~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 255 (317)
T 2buj_A 190 GSRQ--------------ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS 255 (317)
T ss_dssp SHHH--------------HHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC
T ss_pred cccc--------------cccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch
Confidence 0000 00001112334678899999987554 689999999999999999999999542211111
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
.... .......+. .......+.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 256 ~~~~----~~~~~~~~~-----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 256 VALA----VQNQLSIPQ-----------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp HHHH----HHCC--CCC-----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred hhHH----hhccCCCCc-----------cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 1111 111111110 01122368899999999999999999999999999875444
No 142
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.8e-40 Score=373.96 Aligned_cols=242 Identities=21% Similarity=0.315 Sum_probs=199.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|+.. +++.||||+++.. .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~g 426 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 426 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCS
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCC
Confidence 47999999999999976 5788999998653 223446788999999988 799999999999999999999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.++++.. ..+++..+..|+.||+.||+|||+ ++||||||||+|||++.++++||+|||+|+......
T Consensus 427 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~- 496 (674)
T 3pfq_A 427 GDLMYHIQQV------GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG- 496 (674)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-
T ss_pred CcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccccCC-
Confidence 9999999865 358999999999999999999999 899999999999999999999999999998532211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.......||+.|+|||++.+..|+.++|||||||++|||++|+.||..... .+
T Consensus 497 ----------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~ 549 (674)
T 3pfq_A 497 ----------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DE 549 (674)
T ss_dssp ----------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HH
T ss_pred ----------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HH
Confidence 112345688899999999999999999999999999999999999954322 33
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSM-----RHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~~~ 664 (686)
..+.+......++.. ...++.+++.+||+.||++||++ +||.++
T Consensus 550 ~~~~i~~~~~~~p~~-------------~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 550 LFQSIMEHNVAYPKS-------------MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHSSCCCCCTT-------------SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHhCCCCCCcc-------------CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 345555443333221 12357789999999999999998 666654
No 143
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=6.4e-40 Score=335.91 Aligned_cols=247 Identities=24% Similarity=0.336 Sum_probs=191.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
+.||+|+||.||++... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 107 (285)
T 3is5_A 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL 107 (285)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBH
T ss_pred ceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcH
Confidence 46999999999999875 57899999986542 33457899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee---cCCCCeEEeecCcccccccccC
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~~~ 527 (686)
.+++...... ...+++..+..|+.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||+++......
T Consensus 108 ~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (285)
T 3is5_A 108 LERIVSAQAR--GKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE- 181 (285)
T ss_dssp HHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred HHHHHhhhhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc-
Confidence 9998653211 1468999999999999999999999 899999999999999 456789999999997654221
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......||..|+|||.+. ..++.++||||||+++|||++|+.||...... .
T Consensus 182 -----------------------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-----~ 232 (285)
T 3is5_A 182 -----------------------HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-----E 232 (285)
T ss_dssp ----------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----H
T ss_pred -----------------------cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-----H
Confidence 112345678899999886 56899999999999999999999999543321 1
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
................. .....+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~----------~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 233 VQQKATYKEPNYAVECR----------PLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHHHHHHCCCCCCC--C----------CCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHhhhccCCcccccccC----------cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 12222222111111000 012357789999999999999999999864
No 144
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-40 Score=374.97 Aligned_cols=250 Identities=23% Similarity=0.304 Sum_probs=197.6
Q ss_pred cccCccCceEEEEEEeC---CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN---NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|++++++++|||||++++++. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 36999999999999653 457899999976432 33578999999999999999999999996 4568999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
|+|.+++... ..+++..+..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++.+.....
T Consensus 454 g~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 454 GPLNKYLQQN------RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp EEHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 9999999754 458999999999999999999999 8999999999999999999999999999987643221
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~ 606 (686)
.. .......+|..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 525 ~~--------------------~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----- 579 (635)
T 4fl3_A 525 YY--------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----- 579 (635)
T ss_dssp ------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----
T ss_pred cc--------------------ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----
Confidence 00 11122345678999999998899999999999999999998 99999554322
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
+....+.... ... . ......++.+++.+||+.||++||++.+|++.|+++-
T Consensus 580 ~~~~~i~~~~-~~~-~----------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 580 EVTAMLEKGE-RMG-C----------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp HHHHHHHTTC-CCC-C----------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCC-CCC-C----------CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 1222222221 110 0 0112346889999999999999999999999998764
No 145
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=351.04 Aligned_cols=246 Identities=21% Similarity=0.317 Sum_probs=190.3
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCC--CccchHHHHHHHHHHhccCC--CCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRH--PNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++...+++.||||++... .....+.+.+|+.++.+++| |||+++++++...+..++||| +.+|
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 93 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 93 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCC
Confidence 469999999999999988999999998653 33345678999999999976 999999999999999999999 5588
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++.++..|+.|++.||+|||+ ++|+||||||+|||++ ++.+||+|||+++........
T Consensus 94 ~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 94 DLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp EHHHHHHHS------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 999999865 468999999999999999999999 8999999999999997 578999999999865432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-----------CCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----------RKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
.......||..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 164 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 164 ---------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp ---------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ---------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 11224567889999999854 6789999999999999999999999954
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.... .............. . .. .. ....+.+++.+||+.||++|||+.|++++-
T Consensus 223 ~~~~----~~~~~~~~~~~~~~-~-~~----~~-----~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 223 IINQ----ISKLHAIIDPNHEI-E-FP----DI-----PEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CCSH----HHHHHHHHCTTSCC-C-CC----CC-----SCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hhhH----HHHHHHHhcCCccc-C-Cc----cc-----CCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 3221 11222222211110 0 00 00 123577899999999999999999998773
No 146
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.1e-40 Score=337.22 Aligned_cols=242 Identities=19% Similarity=0.306 Sum_probs=197.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 100 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 100 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCC
Confidence 46999999999999976 47889999986532 234567889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 101 ~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 170 (294)
T 2rku_A 101 SLLELHKRR------KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 170 (294)
T ss_dssp BHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCcc-
Confidence 999998754 358999999999999999999999 8999999999999999999999999999976532211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||.+.+..++.++||||||+++|||++|+.||..... .+.
T Consensus 171 ----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~ 223 (294)
T 2rku_A 171 ----------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KET 223 (294)
T ss_dssp ----------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH
T ss_pred ----------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHH
Confidence 11234567889999999988899999999999999999999999954322 122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.......+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 224 ~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 224 YLRIKKNEYSIPKH-------------INPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHHTTCCCCCTT-------------SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHhhccCCCccc-------------cCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 22222222221111 12357789999999999999999999876
No 147
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.1e-40 Score=357.89 Aligned_cols=254 Identities=23% Similarity=0.275 Sum_probs=188.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lV~e 443 (686)
..||+|+||.||+|... +++.||||++... .....+++.+|+.++++++|||||++++++...+ ..++|||
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E 147 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEe
Confidence 46999999999999865 5889999999654 3334567889999999999999999999997653 4699999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
||++ +|.+.+. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+|+...
T Consensus 148 ~~~~-~l~~~~~--------~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 148 LMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp CCSE-EHHHHHT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred CCCC-CHHHHHh--------hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 9975 5766664 248899999999999999999999 899999999999999999999999999998553
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... .....+||..|+|||++.+..|+.++|||||||++|||++|+.||..... .
T Consensus 216 ~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~--~ 269 (464)
T 3ttj_A 216 TSF------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY--I 269 (464)
T ss_dssp -CC------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--H
T ss_pred CCc------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH--H
Confidence 211 12345678899999999999999999999999999999999999954332 1
Q ss_pred hHHHHHHHHHh-------------------hcCCcc-----cccCcccccCCC--cHHHHHHHHHHHHhccccCCCCCCC
Q 042348 604 NIVQWIQLILE-------------------DRKPMT-----DILDPFLAHDLD--KEDEIVSVLKIALDCVHKSPDKRPS 657 (686)
Q Consensus 604 ~~~~~~~~~~~-------------------~~~~~~-----~~~d~~l~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs 657 (686)
+....+..... ...... ..+...+..... ......++.+++.+||+.||++|||
T Consensus 270 ~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t 349 (464)
T 3ttj_A 270 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349 (464)
T ss_dssp HHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCC
T ss_pred HHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCC
Confidence 11111111110 000000 000000000000 0112456889999999999999999
Q ss_pred HHHHHHH
Q 042348 658 MRHVCDS 664 (686)
Q Consensus 658 ~~ev~~~ 664 (686)
++|++++
T Consensus 350 a~e~L~H 356 (464)
T 3ttj_A 350 VDDALQH 356 (464)
T ss_dssp HHHHHTS
T ss_pred HHHHhcC
Confidence 9999987
No 148
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.3e-40 Score=343.32 Aligned_cols=259 Identities=25% Similarity=0.343 Sum_probs=201.9
Q ss_pred cccCccCceEEEEEEe------CCCceEEEEEcCCCCc-cchHHHHHHHHHHhcc-CCCCcceeeEEEEecC-ceeEEEe
Q 042348 373 FLLGKSTIGIVYKVAL------NNEEAVAVRRLGNGGW-QRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVD-EKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~-~~~lV~e 443 (686)
+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|++++.++ +||||+++++++...+ ..++|||
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e 112 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 112 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEE
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEE
Confidence 4699999999999974 3467899999976532 3456789999999999 7999999999988765 4899999
Q ss_pred ccCCCCHHHHhhcCCCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEE
Q 042348 444 YIPNGSLATAIHGKAGII----------SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHI 513 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 513 (686)
|+++|+|.+++....... ....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl 189 (316)
T 2xir_A 113 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKI 189 (316)
T ss_dssp CCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEE
Confidence 999999999998754210 01237899999999999999999999 89999999999999999999999
Q ss_pred eecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CC
Q 042348 514 SDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GK 592 (686)
Q Consensus 514 ~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~ 592 (686)
+|||+++........ .......+|..|+|||.+.+..++.++|||||||++|||+| |+
T Consensus 190 ~Dfg~~~~~~~~~~~---------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 190 CDFGLARDIYKDPDY---------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CCCGGGSCTTTCTTS---------------------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCccccccccCccc---------------------eeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 999999865422110 11223445778999999988899999999999999999998 99
Q ss_pred CCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 593 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
.||........ ......... ... . .. .....+.+++.+||+.||++|||+.|++++|+++...
T Consensus 249 ~p~~~~~~~~~----~~~~~~~~~-~~~-~-----~~-----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 249 SPYPGVKIDEE----FCRRLKEGT-RMR-A-----PD-----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp CSSTTCCCSHH----HHHHHHHTC-CCC-C-----CT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcccchhHH----HHHHhccCc-cCC-C-----CC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 99965433221 112222221 110 0 00 1123578899999999999999999999999998643
No 149
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.8e-40 Score=344.34 Aligned_cols=242 Identities=19% Similarity=0.311 Sum_probs=198.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 126 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 126 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCC
Confidence 46999999999999976 4788999998653 2234567899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 127 ~L~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 196 (335)
T 2owb_A 127 SLLELHKRR------KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 196 (335)
T ss_dssp BHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-
Confidence 999998754 358999999999999999999999 8999999999999999999999999999986542211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||++.+..++.++||||||+++|||++|+.||..... .+.
T Consensus 197 ----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~ 249 (335)
T 2owb_A 197 ----------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KET 249 (335)
T ss_dssp ----------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH
T ss_pred ----------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----HHH
Confidence 11234577889999999988899999999999999999999999954322 122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.......... ....+.+++.+||+.||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 250 YLRIKKNEYSIPKH-------------INPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHHHHTCCCCCTT-------------SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHhcCCCCCCcc-------------CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 22233332222211 11357789999999999999999999875
No 150
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.5e-40 Score=342.65 Aligned_cols=258 Identities=21% Similarity=0.336 Sum_probs=203.2
Q ss_pred cccCccCceEEEEEEeC------CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN------NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||||.+.... .....++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 110 (322)
T 1p4o_A 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 110 (322)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeC
Confidence 46999999999999764 36789999997643 234557899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCc----cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGI----ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~----~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
++|+|.+++...... .....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 111 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~ 187 (322)
T 1p4o_A 111 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187 (322)
T ss_dssp TTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECCTTCCCG
T ss_pred CCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEEECcCccccc
Confidence 999999999753210 001357899999999999999999999 8999999999999999999999999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~ 600 (686)
....... .......+|..|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 188 ~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 246 (322)
T 1p4o_A 188 IYETDYY---------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246 (322)
T ss_dssp GGGGGCE---------------------EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred ccccccc---------------------ccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence 5432110 11122345778999999988889999999999999999999 8999854322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
.+....+...... .. .......+.+++.+||+.||++|||+.|++++|+++...
T Consensus 247 -----~~~~~~~~~~~~~--~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 247 -----EQVLRFVMEGGLL--DK----------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp -----HHHHHHHHTTCCC--CC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred -----HHHHHHHHcCCcC--CC----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 1222222222111 10 011223578899999999999999999999999987543
No 151
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.3e-39 Score=333.43 Aligned_cols=245 Identities=23% Similarity=0.331 Sum_probs=197.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 91 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCC
Confidence 46999999999999875 5889999998654 23345678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC---eEEeecCccccccccc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME---PHISDFGLARLADIAE 526 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfGla~~~~~~~ 526 (686)
|.+.+... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||++.......
T Consensus 92 l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 92 LFEDIVAR------EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 99988765 358999999999999999999999 89999999999999986655 9999999997553221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
......||..|+|||.+.+..++.++||||||+++|+|++|+.||..... .
T Consensus 163 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~ 213 (284)
T 3kk8_A 163 ------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----H 213 (284)
T ss_dssp ------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----H
T ss_pred ------------------------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch-----h
Confidence 11234578889999999999999999999999999999999999954322 1
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+.......+. +.. ......+.+++.+||+.||++|||+.|++++
T Consensus 214 ~~~~~~~~~~~~~~~---~~~------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 214 RLYAQIKAGAYDYPS---PEW------DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHHHHHHHTCCCCCT---TTT------TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHhccccCCc---hhh------cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 222333332221111 100 1122357799999999999999999999885
No 152
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=344.53 Aligned_cols=259 Identities=25% Similarity=0.411 Sum_probs=202.4
Q ss_pred cccCccCceEEEEEEe-----CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecC--ceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVAL-----NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD--EKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV~e~~ 445 (686)
..||+|+||.||++++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 126 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCC
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECC
Confidence 4699999999999984 357899999998766666678999999999999999999999987654 679999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++|+|.+++.... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 127 ~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 127 PYGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp TTCBHHHHHHHST-----TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred CCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 9999999998754 358999999999999999999999 89999999999999999999999999999866432
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc----
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM---- 601 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~---- 601 (686)
... ........++..|+|||.+.+..++.++||||||+++|||+||..||......
T Consensus 199 ~~~--------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~ 258 (326)
T 2w1i_A 199 KEY--------------------YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 258 (326)
T ss_dssp CSE--------------------EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHH
T ss_pred ccc--------------------cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHh
Confidence 110 00112234567799999998888999999999999999999999998432100
Q ss_pred ------chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 602 ------ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 602 ------~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.......+........... . ......++.+++.+||+.||++|||+.||++.|+++..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~------~-----~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 259 IGNDKQGQMIVFHLIELLKNNGRLP------R-----PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HCTTCCTHHHHHHHHHHHHTTCCCC------C-----CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccccchhhhHHHHHHHhhcCCCCC------C-----CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0001111111111111110 0 01123468899999999999999999999999998864
No 153
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8.7e-40 Score=336.59 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=194.4
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
+||+|+||.||+|... +++.||||.+........+.+.+|+.++++++||||+++++++...+..++||||+++++|.+
T Consensus 29 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (295)
T 2clq_A 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA 108 (295)
T ss_dssp EEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHH
T ss_pred EEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHH
Confidence 6999999999999864 578999999977655556789999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-CCCeEEeecCcccccccccCCccc
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
++....+. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||+++.......
T Consensus 109 ~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~---- 178 (295)
T 2clq_A 109 LLRSKWGP---LKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP---- 178 (295)
T ss_dssp HHHHTTCC---CTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------
T ss_pred HHHhhccC---CCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC----
Confidence 99865321 356788999999999999999999 89999999999999987 89999999999976532110
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCC--CCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK--PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
......||..|+|||.+.+.. ++.++||||||+++|||++|+.||.......... .
T Consensus 179 -------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~ 236 (295)
T 2clq_A 179 -------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM---F 236 (295)
T ss_dssp ---------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH---H
T ss_pred -------------------cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH---H
Confidence 112345788899999986543 7899999999999999999999996543322111 1
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........ +.+.. .....+.+++.+||+.||++||++.|++++
T Consensus 237 ~~~~~~~~-------~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 237 KVGMFKVH-------PEIPE-----SMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHHHCCC-------CCCCT-----TSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred hhcccccc-------ccccc-----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111110 11111 122357789999999999999999999865
No 154
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.3e-40 Score=351.45 Aligned_cols=245 Identities=21% Similarity=0.330 Sum_probs=191.4
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCC--CccchHHHHHHHHHHhccC--CCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIR--HPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++...+++.||||++... .....+.+.+|+.++++++ ||||+++++++...+..++||| +.++
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~ 140 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 140 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSE
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCC
Confidence 469999999999999888999999998653 3344577999999999996 5999999999999999999999 5688
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++.++..|+.||+.||+|||+ ++|+||||||+|||++ ++.+||+|||+++........
T Consensus 141 ~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 141 DLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp EHHHHHHHC------SSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 999999865 358899999999999999999999 8999999999999995 589999999999865432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-----------CCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----------RKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 211 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 211 ---------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp ------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ---------------------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 11234568889999999865 3689999999999999999999999954
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.... ...+..+....... . . + .. ....+.+++.+||+.||++|||+.|++++
T Consensus 270 ~~~~----~~~~~~~~~~~~~~-~-~-~---~~-----~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 270 IINQ----ISKLHAIIDPNHEI-E-F-P---DI-----PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCH----HHHHHHHHCTTSCC-C-C-C---CC-----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhHH----HHHHHHHhCccccC-C-C-C---cc-----chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 3221 12222333221110 0 0 0 00 12357789999999999999999999876
No 155
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.8e-40 Score=336.51 Aligned_cols=245 Identities=22% Similarity=0.369 Sum_probs=197.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEe----------------c
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS----------------V 435 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----------------~ 435 (686)
+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++.. .
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (284)
T 2a19_B 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKT 92 (284)
T ss_dssp EEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEE
T ss_pred eeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCc
Confidence 46999999999999986 68999999986543 467899999999999999999999865 3
Q ss_pred CceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEee
Q 042348 436 DEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISD 515 (686)
Q Consensus 436 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 515 (686)
...++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 93 KCLFIQMEFCDKGTLEQWIEKRRG----EKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp EEEEEEECCCCSCBHHHHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECC
T ss_pred ceEEEEEeccCCCCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEECc
Confidence 457999999999999999976432 468999999999999999999999 8999999999999999999999999
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
||+++....... .....+|..|+|||.+.+..++.++||||||+++|||++|..|+
T Consensus 166 fg~~~~~~~~~~------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 221 (284)
T 2a19_B 166 FGLVTSLKNDGK------------------------RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 221 (284)
T ss_dssp CTTCEESSCCSC------------------------CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSH
T ss_pred chhheecccccc------------------------ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcc
Confidence 999976542211 12235678899999999888999999999999999999999998
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccchh
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTEQ 674 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 674 (686)
... .......... ..... ....+.+++.+||+.||++|||+.|++++|+.+....+.
T Consensus 222 ~~~-------~~~~~~~~~~--~~~~~-------------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 222 FET-------SKFFTDLRDG--IISDI-------------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp HHH-------HHHHHHHHTT--CCCTT-------------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred hhH-------HHHHHHhhcc--ccccc-------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 321 1112222111 11111 112467899999999999999999999999998866553
No 156
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=345.79 Aligned_cols=235 Identities=17% Similarity=0.270 Sum_probs=193.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
..||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e 109 (335)
T 3dls_A 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME 109 (335)
T ss_dssp EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEE
Confidence 46999999999999864 688999999865421 133467889999999999999999999999999999999
Q ss_pred ccCCC-CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 444 YIPNG-SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 444 ~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
|+.+| +|.+++... ..+++..+..|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 110 ~~~~g~~l~~~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 110 KHGSGLDLFAFIDRH------PRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp CCTTSCBHHHHHHTC------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred eCCCCccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 99777 999999865 358999999999999999999999 89999999999999999999999999999865
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
.... ......||..|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 181 ~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 236 (335)
T 3dls_A 181 ERGK------------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET 236 (335)
T ss_dssp CTTC------------------------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG
T ss_pred CCCC------------------------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH
Confidence 4221 1123457888999999988776 78999999999999999999999542110
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.......+. .....+.+++.+||+.||++|||+.|++++
T Consensus 237 -----------~~~~~~~~~-------------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -----------VEAAIHPPY-------------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----------TTTCCCCSS-------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----------HhhccCCCc-------------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 012357899999999999999999999987
No 157
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=345.54 Aligned_cols=270 Identities=24% Similarity=0.319 Sum_probs=194.5
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHH--HhccCCCCcceeeEEEEec-----CceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEA--IGKIRHPNIVSLRAYFWSV-----DEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~~-----~~~~lV~e~~ 445 (686)
..||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++... ...++||||+
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecC
Confidence 4699999999999987 57899999986532 2344444444 5568999999999866532 2468999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC---------CceecCCCCCCeeecCCCCeEEeec
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK---------RYVHGDLRPSNILLGKNMEPHISDF 516 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~---------~iiHrDlkp~NILl~~~~~~kl~Df 516 (686)
++|+|.+++... ..++..+..|+.|++.||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 95 ~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 95 PNGSLXKYLSLH-------TSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp TTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred CCCcHHHHHhhc-------ccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 999999999754 35899999999999999999999 6 9999999999999999999999999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-------CCCCCcchHHHHHHHHHHHH
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-------RKPTQKWDIYSYGVILLEMI 589 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwSlGvvl~ell 589 (686)
|+++.+........ ...........||..|+|||++.+ ..++.++|||||||++|||+
T Consensus 165 G~a~~~~~~~~~~~---------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell 229 (336)
T 3g2f_A 165 GLSMRLTGNRLVRP---------------GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229 (336)
T ss_dssp TTCEECSSSSCC------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeecccccccCc---------------cccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHH
Confidence 99987653221100 000112234568899999999876 35667899999999999999
Q ss_pred hCCCCccccCccch------------hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC
Q 042348 590 SGKLPMIQIGSMEL------------NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS 657 (686)
Q Consensus 590 tG~~P~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 657 (686)
+|..||........ .................. +.... .........+.+++.+||+.||++|||
T Consensus 230 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps 305 (336)
T 3g2f_A 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPK-FPEAW---KENSLAVRSLKETIEDCWDQDAEARLT 305 (336)
T ss_dssp TTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCC-CCTTC---CCCSHHHHHHHHHHHHHSCSSGGGSCC
T ss_pred hcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCC-CCccc---ccccchHHHHHHHHHHHhcCChhhCcc
Confidence 99888743322110 001111111111111111 11111 112345667999999999999999999
Q ss_pred HHHHHHHHhcccccchhh
Q 042348 658 MRHVCDSLDRVNISTEQQ 675 (686)
Q Consensus 658 ~~ev~~~L~~i~~~~~~~ 675 (686)
+.|+++.|+++...+++.
T Consensus 306 ~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 306 AQXAEERMAELMMIWERN 323 (336)
T ss_dssp HHHHHHHHHHHHHCCCC-
T ss_pred hHHHHHHHHHHHHHHHhc
Confidence 999999999988665543
No 158
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.6e-40 Score=348.41 Aligned_cols=261 Identities=26% Similarity=0.332 Sum_probs=203.8
Q ss_pred hcccCccCceEEEEEEeCC-C-----ceEEEEEcCCCC-ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVALNN-E-----EAVAVRRLGNGG-WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
...||+|+||.||+|.... + ..||+|.+.... ....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 3579999999999998653 2 479999997653 33456799999999999 89999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCc--------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEee
Q 042348 444 YIPNGSLATAIHGKAGI--------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISD 515 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~--------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 515 (686)
|+++|+|.+++...... .....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCCeEEECc
Confidence 99999999999754210 001358999999999999999999999 8999999999999999999999999
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCC
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLP 594 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P 594 (686)
||+++........ .......+|..|+|||.+.+..++.++|||||||++|||+| |..|
T Consensus 208 fg~~~~~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 266 (333)
T 2i1m_A 208 FGLARDIMNDSNY---------------------IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266 (333)
T ss_dssp CGGGCCGGGCTTS---------------------EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cccccccccccce---------------------eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCC
Confidence 9999865422110 11123345678999999988889999999999999999999 9999
Q ss_pred ccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccc
Q 042348 595 MIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIST 672 (686)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 672 (686)
|........ +........... .+ ......+.+++.+||+.||++|||+.||++.|+++....
T Consensus 267 ~~~~~~~~~-----~~~~~~~~~~~~---~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 267 YPGILVNSK-----FYKLVKDGYQMA---QP--------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp STTCCSSHH-----HHHHHHHTCCCC---CC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CcccchhHH-----HHHHHhcCCCCC---CC--------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 965432221 122222221110 00 011235788999999999999999999999999876543
No 159
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-39 Score=345.48 Aligned_cols=252 Identities=22% Similarity=0.281 Sum_probs=195.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC-----CCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-----HPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|... +++.||||++.... ...+.+..|+++++++. ||||+++++++...+..++||||+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 46999999999999974 67899999997532 33466788999999986 999999999999999999999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-------------------
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK------------------- 507 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~------------------- 507 (686)
+++|.+++..... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 119 GPSLYEIITRNNY----NGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred CCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 9999999986542 358999999999999999999999 89999999999999975
Q ss_pred ------CCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHH
Q 042348 508 ------NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSY 581 (686)
Q Consensus 508 ------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSl 581 (686)
++.+||+|||+++..... .....||..|+|||++.+..++.++|||||
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 245 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDY--------------------------HGSIINTRQYRAPEVILNLGWDVSSDMWSF 245 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSC--------------------------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHH
T ss_pred cccccCCCCEEEEeccCceecCCC--------------------------CcCccCcccccCcHHHcCCCCCCccchHHH
Confidence 789999999999753311 123456888999999999999999999999
Q ss_pred HHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccc-------------cC-----cccccCCCcHH--------
Q 042348 582 GVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDI-------------LD-----PFLAHDLDKED-------- 635 (686)
Q Consensus 582 Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~d-----~~l~~~~~~~~-------- 635 (686)
||++|||++|+.||...... +....+.... .+.+.. ++ ...........
T Consensus 246 G~il~ell~g~~pf~~~~~~--~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 320 (360)
T 3llt_A 246 GCVLAELYTGSLLFRTHEHM--EHLAMMESII---QPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKC 320 (360)
T ss_dssp HHHHHHHHHSSCSCCCSSHH--HHHHHHHHHT---CCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCCCCcHH--HHHHHHHHhc---CCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhc
Confidence 99999999999999653322 2222221111 111100 00 00000000000
Q ss_pred -------HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 636 -------EIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 636 -------~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+.+++.+||+.||++|||+.|++++
T Consensus 321 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 321 LPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp CCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 01457799999999999999999999864
No 160
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.1e-39 Score=337.34 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=195.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||++... +++.||+|.+........+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (304)
T 2jam_A 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELF 94 (304)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred eeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHH
Confidence 46999999999999876 68899999997654444567899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee---cCCCCeEEeecCcccccccccCC
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||+++......
T Consensus 95 ~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~-- 163 (304)
T 2jam_A 95 DRILER------GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI-- 163 (304)
T ss_dssp HHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT--
T ss_pred HHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc--
Confidence 998754 358999999999999999999999 899999999999999 788999999999987432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....||..|+|||.+.+..++.++|||||||++|||++|+.||..... ...
T Consensus 164 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~ 215 (304)
T 2jam_A 164 -----------------------MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-----SKL 215 (304)
T ss_dssp -----------------------THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHH
T ss_pred -----------------------cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHH
Confidence 1123467789999999998999999999999999999999999954322 122
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+............ ......+.+++.+||+.||++|||+.|++++
T Consensus 216 ~~~i~~~~~~~~~~~~---------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 216 FEKIKEGYYEFESPFW---------DDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHHHCCCCCCTTTT---------TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHcCCCCCCcccc---------ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 3333333222111100 1122467899999999999999999999875
No 161
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.7e-40 Score=340.24 Aligned_cols=258 Identities=21% Similarity=0.307 Sum_probs=193.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTV 88 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCch
Confidence 46999999999999976 488999999865432 224668899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 l~~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 157 (311)
T 4agu_A 89 LHELDRYQ------RGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-- 157 (311)
T ss_dssp HHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred HHHHHhhh------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc--
Confidence 99988754 358999999999999999999999 8999999999999999999999999999986542211
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||...... +....
T Consensus 158 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~ 214 (311)
T 4agu_A 158 ---------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYL 214 (311)
T ss_dssp -----------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHH
T ss_pred ---------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 1123456788999999876 66899999999999999999999999554322 12222
Q ss_pred HHHHHhhcC-----------Ccc--cccCcccccCC--CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRK-----------PMT--DILDPFLAHDL--DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~-----------~~~--~~~d~~l~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+........ ... ...++...... ........+.+++.+||+.||++|||++|++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 215 IRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred HHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 222111100 000 00000000000 001123457899999999999999999999987
No 162
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.2e-39 Score=335.59 Aligned_cols=260 Identities=17% Similarity=0.202 Sum_probs=198.5
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEE-EecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF-WSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|.. .+++.||||.+..... ..++.+|++++++++|++++..+.++ ...+..++||||+ +++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 4699999999999986 5688999998755432 24688999999999988877776666 5566779999999 9999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee---cCCCCeEEeecCcccccccccC
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~~~ 527 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 92 ~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 92 EDLFNFCS-----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 99998543 459999999999999999999999 899999999999999 7889999999999987653322
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch--hH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL--NI 605 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~--~~ 605 (686)
.... .........||..|+|||.+.+..++.++|||||||++|||++|+.||........ .+
T Consensus 164 ~~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 4hgt_A 164 HQHI----------------PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp CCBC----------------CCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred CccC----------------CCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh
Confidence 1100 00122345678899999999999999999999999999999999999965433221 11
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
......... .+... ... .....+.+++.+||+.||++|||+.+|++.|+++...
T Consensus 228 ~~~~~~~~~--~~~~~-----~~~-----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 228 ERISEKKMS--TPIEV-----LCK-----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHHHHHHHH--SCHHH-----HTT-----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhhccccc--chhhh-----hhc-----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 111111111 01000 000 0123688999999999999999999999999987643
No 163
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=337.46 Aligned_cols=258 Identities=21% Similarity=0.252 Sum_probs=192.5
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCC-----ccchHHHHHHHHHHhccC---CCCcceeeEEEEecC-----ce
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG-----WQRFKEFQTEAEAIGKIR---HPNIVSLRAYFWSVD-----EK 438 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~-----~~ 438 (686)
..||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++ ||||+++++++.... ..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~ 94 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV 94 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence 4699999999999996 468899999985321 112356778888877775 999999999998765 47
Q ss_pred eEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCc
Q 042348 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518 (686)
Q Consensus 439 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 518 (686)
++||||+. |+|.+++..... ..+++.++..|+.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 95 ~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 95 TLVFEHVD-QDLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEECCC-CBHHHHHHTCCT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEehhhh-cCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 99999996 699999987643 348999999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCcccc
Q 042348 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQI 598 (686)
Q Consensus 519 a~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~ 598 (686)
++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 167 a~~~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 167 ARIYSYQM------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp TTTSTTCC------------------------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred ccccCCCc------------------------ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 97553211 112345688899999999899999999999999999999999999553
Q ss_pred CccchhHHHHHHHHHhhcC--CcccccC---cccccC-CCc-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 599 GSMELNIVQWIQLILEDRK--PMTDILD---PFLAHD-LDK-----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~--~~~~~~d---~~l~~~-~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
... +....+........ .+..... ...... ... .+....+.+++.+||+.||++|||+.|++++
T Consensus 223 ~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 223 SEA--DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SHH--HHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CHH--HHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 322 22222222111100 0000000 000000 000 0123467899999999999999999999875
No 164
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-39 Score=344.06 Aligned_cols=257 Identities=18% Similarity=0.268 Sum_probs=194.4
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCC-----CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-----GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
...||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 110 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCC
Confidence 357999999999999875 5788999998543 2344578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCc----------------------------------cccCCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 042348 446 PNGSLATAIHGKAGI----------------------------------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK 491 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~----------------------------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~ 491 (686)
++|+|.+++...... .....+++..+..|+.|++.||+|||+ +
T Consensus 111 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~ 187 (345)
T 3hko_A 111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---Q 187 (345)
T ss_dssp CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---C
Confidence 999999999621100 000124567788999999999999999 8
Q ss_pred CceecCCCCCCeeecCCC--CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC
Q 042348 492 RYVHGDLRPSNILLGKNM--EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV 569 (686)
Q Consensus 492 ~iiHrDlkp~NILl~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 569 (686)
+|+||||||+||+++.++ .+||+|||+++......... ........||..|+|||.+.+
T Consensus 188 ~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~ 248 (345)
T 3hko_A 188 GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE-------------------YYGMTTKAGTPYFVAPEVLNT 248 (345)
T ss_dssp TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC---------------------------CCCGGGCCHHHHTC
T ss_pred CccccCCChhhEEEecCCCceEEEeeccccccccccCccc-------------------cccccccCCCccccCchhhcc
Confidence 999999999999998776 89999999998654322110 011234567888999999865
Q ss_pred --CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhc
Q 042348 570 --RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDC 647 (686)
Q Consensus 570 --~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~c 647 (686)
..++.++|||||||++|||++|+.||...... +....+........ .+.. ......+.+++.+|
T Consensus 249 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~---~~~~------~~~~~~~~~li~~~ 314 (345)
T 3hko_A 249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA-----DTISQVLNKKLCFE---NPNY------NVLSPLARDLLSNL 314 (345)
T ss_dssp SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHCCCCTT---SGGG------GGSCHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH-----HHHHHHHhcccccC---Cccc------ccCCHHHHHHHHHH
Confidence 67899999999999999999999999544322 22333333322211 1111 11224678999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 042348 648 VHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 648 l~~dP~~RPs~~ev~~~ 664 (686)
|+.||++||++.|++++
T Consensus 315 l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 315 LNRNVDERFDAMRALQH 331 (345)
T ss_dssp SCSCTTTSCCHHHHHHS
T ss_pred cCCChhHCCCHHHHhcC
Confidence 99999999999999875
No 165
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.9e-40 Score=337.30 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=197.9
Q ss_pred ccCccCceEEEEEEeC---CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 374 LLGKSTIGIVYKVALN---NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
.||+|+||.||+|... .++.||||.+.... ....+++.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 6999999999999643 36789999997643 22356799999999999999999999999 567789999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 103 ~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 103 PLNKYLQQN------RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CHHHHHHhC------cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 999999864 358999999999999999999999 89999999999999999999999999999865432210
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~ 607 (686)
........++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .
T Consensus 174 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~ 228 (291)
T 1xbb_A 174 --------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----E 228 (291)
T ss_dssp --------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----H
T ss_pred --------------------ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----H
Confidence 011122345678999999988889999999999999999999 99999553321 1
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccc
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIST 672 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 672 (686)
....+...... . .. ......+.+++.+||+.||++||++.|+++.|+++-...
T Consensus 229 ~~~~~~~~~~~--~-~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 229 VTAMLEKGERM--G-CP---------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp HHHHHHTTCCC--C-CC---------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC--C-CC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 12222222111 0 00 112346889999999999999999999999999876433
No 166
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2e-39 Score=334.12 Aligned_cols=260 Identities=17% Similarity=0.198 Sum_probs=198.8
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEE-EecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYF-WSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|.. .+++.||||++..... .+++.+|+.++++++|++++..+.++ ...+..++||||+ +++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCH
Confidence 4699999999999996 5688999999865432 25689999999999988877666665 4566779999999 9999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee---cCCCCeEEeecCcccccccccC
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~~~ 527 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||+++.......
T Consensus 92 ~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 92 EDLFNFCS-----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 99997543 468999999999999999999999 899999999999999 4888999999999987653322
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc-hhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME-LNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~-~~~~ 606 (686)
.... .........||..|+|||.+.+..++.++|||||||++|||++|+.||....... ....
T Consensus 164 ~~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 3uzp_A 164 HQHI----------------PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp CCBC----------------CCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred cccc----------------ccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhh
Confidence 1100 0011234567889999999999899999999999999999999999996543221 1111
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
..+...... .+... +.. .....+.+++.+||+.||++|||+.+|++.|+++..
T Consensus 228 ~~~~~~~~~-~~~~~-----~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 228 ERISEKKMS-TPIEV-----LCK-----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHHHHHHHH-SCHHH-----HTT-----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hhhcccccC-CchHH-----HHh-----hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 111111111 11000 000 112357899999999999999999999999998754
No 167
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.8e-40 Score=348.06 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=196.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... ++..||+|++... .....+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 118 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 118 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCH
Confidence 46999999999999976 5889999998764 233456789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC-CceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK-RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 119 ~~~l~~~------~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 186 (360)
T 3eqc_A 119 DQVLKKA------GRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 186 (360)
T ss_dssp HHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc---
Confidence 9999765 358999999999999999999998 5 89999999999999999999999999997543211
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH---
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV--- 606 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~--- 606 (686)
.....||..|+|||++.+..++.++|||||||++|||++|+.||......+....
T Consensus 187 ----------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 244 (360)
T 3eqc_A 187 ----------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 244 (360)
T ss_dssp --------------------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-
T ss_pred ----------------------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc
Confidence 1234567889999999999999999999999999999999999965432221100
Q ss_pred ----------------------------------HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCC
Q 042348 607 ----------------------------------QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSP 652 (686)
Q Consensus 607 ----------------------------------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP 652 (686)
........... + ..........+.+++.+||+.||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~li~~~L~~dP 313 (360)
T 3eqc_A 245 QVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP-------P----KLPSGVFSLEFQDFVNKCLIKNP 313 (360)
T ss_dssp -----------------------------CCCHHHHHHHHHHSCC-------C----CCCTTTSCHHHHHHHHHHHCSST
T ss_pred cccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCC-------C----CCCcccccHHHHHHHHHHhhcCh
Confidence 00000000000 0 00001123468899999999999
Q ss_pred CCCCCHHHHHHH
Q 042348 653 DKRPSMRHVCDS 664 (686)
Q Consensus 653 ~~RPs~~ev~~~ 664 (686)
++|||+.|++++
T Consensus 314 ~~Rpt~~ell~h 325 (360)
T 3eqc_A 314 AERADLKQLMVH 325 (360)
T ss_dssp TTSCCHHHHHTS
T ss_pred hhCCCHHHHhhC
Confidence 999999999876
No 168
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.3e-39 Score=331.93 Aligned_cols=247 Identities=24% Similarity=0.337 Sum_probs=197.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 92 (276)
T 2yex_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92 (276)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEG
T ss_pred EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcH
Confidence 46999999999999876 68899999986432 23456789999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 93 ~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-- 161 (276)
T 2yex_A 93 FDRIEPD------IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-- 161 (276)
T ss_dssp GGGSBTT------TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE--
T ss_pred HHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch--
Confidence 9998754 358999999999999999999999 89999999999999999999999999999865422110
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......||..|+|||.+.+..+ +.++||||||+++|||++|+.||............+
T Consensus 162 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~- 221 (276)
T 2yex_A 162 -------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW- 221 (276)
T ss_dssp -------------------CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHH-
T ss_pred -------------------hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHh-
Confidence 11223457888999999987665 779999999999999999999996654333222221
Q ss_pred HHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....... .+ .......+.+++.+||+.||++|||+.|++++
T Consensus 222 ---~~~~~~~----~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 222 ---KEKKTYL----NP-------WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ---HTTCTTS----TT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---hhccccc----Cc-------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 1111110 00 01122357789999999999999999999874
No 169
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=9.8e-40 Score=346.92 Aligned_cols=248 Identities=15% Similarity=0.181 Sum_probs=195.9
Q ss_pred cccCccCceEEEEEE------eCCCceEEEEEcCCCCccchHHHHHHHHHHhccC---CCCcceeeEEEEecCceeEEEe
Q 042348 373 FLLGKSTIGIVYKVA------LNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR---HPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lV~e 443 (686)
..||+|+||.||+|. ..+++.||||++.... ..++..|++++.+++ |+||+++++++...+..++|||
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 469999999999994 4468899999997643 456778888888886 9999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-----------CCCeE
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-----------NMEPH 512 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-----------~~~~k 512 (686)
||++|+|.+++...... ....+++..++.|+.||+.||+|||+ ++||||||||+|||++. ++.+|
T Consensus 148 ~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred ccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccccCCEE
Confidence 99999999999753211 11469999999999999999999999 89999999999999998 89999
Q ss_pred EeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCC
Q 042348 513 ISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGK 592 (686)
Q Consensus 513 l~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~ 592 (686)
|+|||+|+.+...... .......||..|+|||++.+..++.++|||||||++|||+||+
T Consensus 224 l~DFG~a~~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~ 282 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKG---------------------TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282 (365)
T ss_dssp ECCCTTCEEGGGSCTT---------------------EEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred EeeCchhhhhhccCCC---------------------ceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence 9999999765422110 1223456888999999999999999999999999999999999
Q ss_pred CCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCC-CCHHHHHHHHhcccc
Q 042348 593 LPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKR-PSMRHVCDSLDRVNI 670 (686)
Q Consensus 593 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~ev~~~L~~i~~ 670 (686)
.||........ .....+. .. . ....+.+++..|++.+|.+| |+++++.+.|+++..
T Consensus 283 ~pf~~~~~~~~--------------~~~~~~~----~~-~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 283 YMKVKNEGGEC--------------KPEGLFR----RL-P---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp CCCEEEETTEE--------------EECSCCT----TC-S---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred CccccCCCCce--------------eechhcc----cc-C---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 99954322111 0011111 11 1 12346678889999999999 678888888887643
No 170
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.9e-39 Score=331.93 Aligned_cols=249 Identities=22% Similarity=0.335 Sum_probs=197.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||+|.+..... ...+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 90 (283)
T 3bhy_A 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELV 90 (283)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeec
Confidence 46999999999999986 588999999865321 23577999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC----CeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM----EPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DfGla~~ 521 (686)
++++|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|||+++.
T Consensus 91 ~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 91 SGGELFDFLAEK------ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp CSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 999999999754 458999999999999999999999 8999999999999998877 899999999976
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
..... ......+|..|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus 162 ~~~~~------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 217 (283)
T 3bhy_A 162 IEAGN------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 217 (283)
T ss_dssp CC--------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ccCCC------------------------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH
Confidence 53221 112345678899999999889999999999999999999999999553321
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hhcc
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS--LDRV 668 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~i 668 (686)
.....+....... ++.... .....+.+++.+||+.||++|||+.|++++ ++.+
T Consensus 218 -----~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 218 -----ETLTNISAVNYDF----DEEYFS-----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp -----HHHHHHHTTCCCC----CHHHHT-----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred -----HHHHHhHhcccCC----cchhcc-----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 1222222221111 111111 112357899999999999999999999985 4444
No 171
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=344.34 Aligned_cols=256 Identities=19% Similarity=0.299 Sum_probs=190.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc-chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ-RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||||++...... ....+.+|++++++++||||+++++++...+..++||||++ |+|
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 86 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDL 86 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCH
Confidence 46999999999999976 6889999998654322 22345689999999999999999999999999999999997 599
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---- 154 (324)
T 3mtl_A 87 KQYLDDCG-----NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---- 154 (324)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCc----
Confidence 99988654 458999999999999999999999 899999999999999999999999999997543211
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWI 609 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~ 609 (686)
.......+|..|+|||++.+ ..++.++|||||||++|||++|+.||..... .+....+
T Consensus 155 -------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i 213 (324)
T 3mtl_A 155 -------------------KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV--EEQLHFI 213 (324)
T ss_dssp ---------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH
T ss_pred -------------------cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence 11123456888999999876 5689999999999999999999999965432 2222223
Q ss_pred HHHHhhcCCcccccCccccc---------C--CC-----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 610 QLILEDRKPMTDILDPFLAH---------D--LD-----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 610 ~~~~~~~~~~~~~~d~~l~~---------~--~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...... +........... . .. .......+.+++.+||+.||++|||+.|++++
T Consensus 214 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 214 FRILGT--PTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHCC--CCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHhCC--CChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 222221 111111100000 0 00 00122457899999999999999999999886
No 172
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=9.1e-40 Score=341.79 Aligned_cols=257 Identities=25% Similarity=0.388 Sum_probs=198.4
Q ss_pred cccCccCceEEEEEEeC-CCce--EEEEEcCCC-CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEA--VAVRRLGNG-GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~ 447 (686)
..||+|+||.||+|... ++.. ||||.+... .....+.+.+|+++++++ +||||+++++++.+.+..++||||+++
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 110 (327)
T 1fvr_A 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 110 (327)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCC
Confidence 46999999999999865 4554 599988653 233456789999999999 899999999999999999999999999
Q ss_pred CCHHHHhhcCCCc----------cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecC
Q 042348 448 GSLATAIHGKAGI----------ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 448 gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
|+|.+++...... .....+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 111 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kL~Dfg 187 (327)
T 1fvr_A 111 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 187 (327)
T ss_dssp CBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTT
T ss_pred CCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeEEEcccC
Confidence 9999999865300 011468999999999999999999999 899999999999999999999999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCcc
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMI 596 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~ 596 (686)
+++...... ......++..|+|||.+.+..++.++|||||||++|||+| |+.||.
T Consensus 188 ~~~~~~~~~------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~ 243 (327)
T 1fvr_A 188 LSRGQEVYV------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 243 (327)
T ss_dssp CEESSCEEC------------------------CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cCccccccc------------------------cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCC
Confidence 987432111 0112334667999999988889999999999999999998 999995
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
..... .....+.... ... .. ......+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 244 ~~~~~-----~~~~~~~~~~-~~~------~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 244 GMTCA-----ELYEKLPQGY-RLE------KP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp TCCHH-----HHHHHGGGTC-CCC------CC-----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCcHH-----HHHHHhhcCC-CCC------CC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 43221 1122221111 100 00 0122467899999999999999999999999998765444
No 173
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7e-40 Score=342.85 Aligned_cols=255 Identities=23% Similarity=0.280 Sum_probs=186.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++ |+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 118 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-ND 118 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CC
Confidence 46999999999999865 688999999975432 224567899999999999999999999999999999999997 59
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec-----CCCCeEEeecCccccccc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG-----KNMEPHISDFGLARLADI 524 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~-----~~~~~kl~DfGla~~~~~ 524 (686)
|.+++... ..+++..+..|+.|++.||+|||+ ++|+||||||+|||++ .++.+||+|||+++....
T Consensus 119 L~~~~~~~------~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 119 LKKYMDKN------PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp HHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred HHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 99999865 358999999999999999999999 8999999999999994 455699999999986542
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... ......+|..|+|||++.+. .++.++|||||||++|||++|+.||......
T Consensus 190 ~~~-----------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-- 244 (329)
T 3gbz_A 190 PIR-----------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-- 244 (329)
T ss_dssp ---------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred ccc-----------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH--
Confidence 211 11234567889999998774 4899999999999999999999999553321
Q ss_pred hHHHHHHHHHhhcCCcccccC-----cccccCC------CcH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILD-----PFLAHDL------DKE-----DEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d-----~~l~~~~------~~~-----~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+....+..... .+...... +...... ... ....++.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 245 DQLFKIFEVLG--LPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp HHHHHHHHHHC--CCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHhC--CCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 11111111111 11000000 0000000 000 022467899999999999999999999874
No 174
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.5e-40 Score=335.16 Aligned_cols=245 Identities=24% Similarity=0.403 Sum_probs=192.2
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEec-CceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-DEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||++... ++.||||.+.... ..+.+.+|++++++++||||+++++++... +..++||||+++|+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103 (278)
T ss_dssp EEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHH
T ss_pred eEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHH
Confidence 46999999999999875 7899999997643 457799999999999999999999997654 4789999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 104 ~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----- 171 (278)
T 1byg_A 104 DYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 171 (278)
T ss_dssp HHHHHHHH----HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred HHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc-----
Confidence 99975431 248899999999999999999999 899999999999999999999999999987543211
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 610 (686)
....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+ . ..
T Consensus 172 ---------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~---~~ 225 (278)
T 1byg_A 172 ---------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--V---VP 225 (278)
T ss_dssp -------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--H---HH
T ss_pred ---------------------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--H---HH
Confidence 11234667999999988889999999999999999998 999996543222 1 11
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
.+.... . +... ......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 226 ~~~~~~-~------~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 226 RVEKGY-K------MDAP-----DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HHTTTC-C------CCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcCC-C------CCCc-----ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 221111 1 0010 1123467889999999999999999999999999864
No 175
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9e-40 Score=350.13 Aligned_cols=280 Identities=24% Similarity=0.308 Sum_probs=189.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccC-CCCcceeeEEEEecC--ceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVD--EKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~~~lV~e~~~ 446 (686)
..||+|+||.||+|... +++.||||++... .....+++.+|+.++.++. ||||+++++++...+ ..++|||||+
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~ 94 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME 94 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC
Confidence 46999999999999865 6889999998653 3344567889999999997 999999999998654 6799999997
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+|+......
T Consensus 95 -~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 95 -TDLHAVIRAN-------ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp -EEHHHHHHHT-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred -cCHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 6999999753 58999999999999999999999 899999999999999999999999999998764321
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
....... ....................+||..|+|||++.+ ..++.++|||||||++|||++|+.||...... +.
T Consensus 164 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~ 239 (388)
T 3oz6_A 164 RVTNNIP--LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM--NQ 239 (388)
T ss_dssp CCCCCGG--GCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HH
T ss_pred ccccccc--ccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH--HH
Confidence 1100000 0000000000001122345688999999999876 67899999999999999999999999654321 11
Q ss_pred HHHHHHHHhhcCCccccc----Cc------------------ccccCC-----------CcHHHHHHHHHHHHhccccCC
Q 042348 606 VQWIQLILEDRKPMTDIL----DP------------------FLAHDL-----------DKEDEIVSVLKIALDCVHKSP 652 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~----d~------------------~l~~~~-----------~~~~~~~~l~~l~~~cl~~dP 652 (686)
...+..... .+..+.+ .+ .....+ ........+.+++.+||+.||
T Consensus 240 ~~~i~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 240 LERIIGVID--FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHHHHHHHC--CCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHhcC--CCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 111111111 0100000 00 000000 000123467899999999999
Q ss_pred CCCCCHHHHHHH--Hhccc
Q 042348 653 DKRPSMRHVCDS--LDRVN 669 (686)
Q Consensus 653 ~~RPs~~ev~~~--L~~i~ 669 (686)
++|||+.|++++ +..+.
T Consensus 318 ~~R~t~~e~l~Hp~~~~~~ 336 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIFH 336 (388)
T ss_dssp GGSCCHHHHTTSTTTTTTC
T ss_pred ccCCCHHHHhCCHHHHHhc
Confidence 999999999988 55554
No 176
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=343.46 Aligned_cols=256 Identities=21% Similarity=0.299 Sum_probs=193.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc-----chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ-----RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
..||+|+||.||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 95 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME 95 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCC
Confidence 46999999999999975 5889999998753221 12468899999999999999999999999999999999997
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+ +|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 96 ~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 96 T-DLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp E-EHHHHHTTCC-----SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred C-CHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 5 8999887654 468899999999999999999999 899999999999999999999999999998653211
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
. ......+|..|+|||++.+. .++.++|||||||++|||++|..||...... +.
T Consensus 167 ~-----------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~--~~ 221 (346)
T 1ua2_A 167 R-----------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL--DQ 221 (346)
T ss_dssp C-----------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH
T ss_pred c-----------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--HH
Confidence 1 11234578889999998654 5899999999999999999999998543321 11
Q ss_pred HHHHHHHHhh-cCCc----cccc---CcccccC---CCc----HHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 606 VQWIQLILED-RKPM----TDIL---DPFLAHD---LDK----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 606 ~~~~~~~~~~-~~~~----~~~~---d~~l~~~---~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
+..+... ..+. .+.. +...... ... ......+.+++.+||+.||++|||+.|++++-
T Consensus 222 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 222 ---LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp ---HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred ---HHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 2222221 1110 0000 0000000 000 11234688999999999999999999999863
No 177
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.1e-39 Score=338.95 Aligned_cols=247 Identities=22% Similarity=0.306 Sum_probs=196.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||+|... +++.||||.+... .......+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 56999999999999876 5889999998653 233457899999999999 5699999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC---CCCeEEeecCcccccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK---NMEPHISDFGLARLADIA 525 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~~~~~ 525 (686)
+|.+++..... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||+++.....
T Consensus 115 ~L~~~~~~~~~----~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 115 EIFSLCLPELA----EMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred cHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 99999865432 468999999999999999999999 89999999999999987 789999999999865422
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
. ......||..|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 188 ~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--- 240 (327)
T 3lm5_A 188 C------------------------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--- 240 (327)
T ss_dssp ------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---
T ss_pred c------------------------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH---
Confidence 1 1123457888999999999999999999999999999999999995533221
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+............ ......+.+++.+||+.||++|||+.|++++
T Consensus 241 --~~~~i~~~~~~~~~~~~---------~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 241 --TYLNISQVNVDYSEETF---------SSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp --HHHHHHHTCCCCCTTTT---------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --HHHHHHhcccccCchhh---------cccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 12222222111111000 1123357789999999999999999999876
No 178
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=345.80 Aligned_cols=253 Identities=22% Similarity=0.325 Sum_probs=189.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lV~e 443 (686)
..||+|+||.||+|... +++.||||++... .....+++.+|++++++++||||+++++++...+ ..++|||
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e 110 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP 110 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence 46999999999999874 6899999998653 2233567899999999999999999999998653 4599999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+ +++|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~~-~~~L~~~~~~-------~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 111 FM-GTDLGKLMKH-------EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CC-SEEHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred cC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 99 8899999975 248999999999999999999999 899999999999999999999999999998543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.. .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 180 ~~--------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-- 231 (367)
T 1cm8_A 180 SE--------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-- 231 (367)
T ss_dssp SS--------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred cc--------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH--
Confidence 11 123467888999999876 6799999999999999999999999954332
Q ss_pred hhHHHHHHHHHhhc-CCccc-------------------ccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 042348 603 LNIVQWIQLILEDR-KPMTD-------------------ILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC 662 (686)
Q Consensus 603 ~~~~~~~~~~~~~~-~~~~~-------------------~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 662 (686)
.+. +..+.... .+..+ .....+.... ......+.+++.+||+.||++|||+.|++
T Consensus 232 ~~~---l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~mL~~dP~~R~t~~e~l 306 (367)
T 1cm8_A 232 LDQ---LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASIL--TNASPLAVNLLEKMLVLDAEQRVTAGEAL 306 (367)
T ss_dssp HHH---HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTC--TTCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred HHH---HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHC--CCCCHHHHHHHHHHccCChhHCCCHHHHh
Confidence 111 11111110 00000 0000000000 11234678999999999999999999999
Q ss_pred HH--Hhccc
Q 042348 663 DS--LDRVN 669 (686)
Q Consensus 663 ~~--L~~i~ 669 (686)
++ ++.+.
T Consensus 307 ~hp~f~~~~ 315 (367)
T 1cm8_A 307 AHPYFESLH 315 (367)
T ss_dssp HSGGGTTTC
T ss_pred cChHHHhhc
Confidence 86 45544
No 179
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.9e-39 Score=330.75 Aligned_cols=241 Identities=24% Similarity=0.365 Sum_probs=190.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG 96 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCC
Confidence 46999999999999976 68899999986532 223467899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 165 (276)
T 2h6d_A 97 ELFDYICKH------GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 165 (276)
T ss_dssp BHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred cHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence 999999764 358999999999999999999999 899999999999999999999999999997653221
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
......+|..|+|||.+.+..+ +.++||||||+++|||++|+.||..... ..
T Consensus 166 ----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~ 218 (276)
T 2h6d_A 166 ----------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PT 218 (276)
T ss_dssp ---------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HH
T ss_pred ----------------------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HH
Confidence 0122356778999999987665 6899999999999999999999954321 22
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+.......+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 219 ~~~~~~~~~~~~~~~-------------~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 219 LFKKIRGGVFYIPEY-------------LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHHHHCCCCCCTT-------------SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHhhcCcccCchh-------------cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 233333322221111 12357789999999999999999999985
No 180
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.1e-39 Score=331.96 Aligned_cols=240 Identities=21% Similarity=0.333 Sum_probs=196.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 99 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG 99 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCC
Confidence 46999999999999876 57789999985431 122467899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 100 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 168 (284)
T 2vgo_A 100 ELYKELQKH------GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168 (284)
T ss_dssp EHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence 999999764 358999999999999999999999 899999999999999999999999999986543111
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ..
T Consensus 169 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~ 220 (284)
T 2vgo_A 169 -----------------------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ET 220 (284)
T ss_dssp -----------------------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HH
T ss_pred -----------------------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HH
Confidence 12345678899999999988999999999999999999999999543321 22
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.......+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 221 ~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 221 HRRIVNVDLKFPPF-------------LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp HHHHHTTCCCCCTT-------------SCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred HHHHhccccCCCCc-------------CCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 22333222211111 12357789999999999999999999875
No 181
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1e-39 Score=337.38 Aligned_cols=246 Identities=23% Similarity=0.365 Sum_probs=194.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 104 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD 104 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHH
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHH
Confidence 36999999999999986 48899999998766666788999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 171 (302)
T 2j7t_A 105 AIMLELD-----RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL----- 171 (302)
T ss_dssp HHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-----
T ss_pred HHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc-----
Confidence 9987643 458999999999999999999999 899999999999999999999999999986432111
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccc-----cCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-----KVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
.......||..|+|||.+ ....++.++||||||+++|||++|+.||......
T Consensus 172 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----- 228 (302)
T 2j7t_A 172 ------------------QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----- 228 (302)
T ss_dssp ------------------HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----
T ss_pred ------------------cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-----
Confidence 011234567889999987 4667899999999999999999999999543321
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...........+ .... .......+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~--~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 229 RVLLKIAKSDPP--TLLT--------PSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHHHHSCCC--CCSS--------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHHhccCCc--ccCC--------ccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 222222222211 1111 11123467899999999999999999999875
No 182
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.4e-39 Score=330.62 Aligned_cols=242 Identities=24% Similarity=0.382 Sum_probs=191.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec----CceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV----DEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----~~~~lV~e~~ 445 (686)
..||+|+||.||+|... ++..||+|.+... .....+.+.+|+.++++++||||+++++++... ...++||||+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 111 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence 36999999999999875 5778999998653 233456789999999999999999999998763 4579999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC--ceecCCCCCCeeec-CCCCeEEeecCccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR--YVHGDLRPSNILLG-KNMEPHISDFGLARLA 522 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--iiHrDlkp~NILl~-~~~~~kl~DfGla~~~ 522 (686)
++|+|.+++... ..+++..+..|+.|++.||+|||+ ++ |+||||||+||+++ .++.+||+|||++...
T Consensus 112 ~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 112 TSGTLKTYLKRF------KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp CSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred CCCCHHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999764 358999999999999999999999 77 99999999999997 7899999999999643
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
... ......||..|+|||.+. ..++.++|||||||++|+|++|+.||......
T Consensus 183 ~~~-------------------------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~- 235 (290)
T 1t4h_A 183 RAS-------------------------FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA- 235 (290)
T ss_dssp CTT-------------------------SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-
T ss_pred ccc-------------------------ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-
Confidence 311 112345678899999887 45899999999999999999999999553322
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
............+ ...+ .. ....+.+++.+||+.||++|||+.|++++
T Consensus 236 ---~~~~~~~~~~~~~--~~~~----~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 236 ---AQIYRRVTSGVKP--ASFD----KV-----AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---HHHHHHHTTTCCC--GGGG----GC-----CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---HHHHHHHhccCCc--cccC----CC-----CCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1222222222111 1111 11 12357899999999999999999999864
No 183
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.7e-40 Score=354.11 Aligned_cols=246 Identities=21% Similarity=0.307 Sum_probs=185.4
Q ss_pred hcccCccCceEEEEEEeC-CCceEEEEEcCCCC--------ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEE
Q 042348 372 AFLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--------WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 442 (686)
.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++. .+..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEE
Confidence 346999999999999875 57899999986431 112235889999999999999999999975 45679999
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC---CCeEEeecCcc
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN---MEPHISDFGLA 519 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DfGla 519 (686)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.+ +.+||+|||++
T Consensus 219 e~~~~g~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 219 ELMEGGELFDKVVGN------KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp ECCTTCBGGGGTSSS------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EcCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 999999999998754 468999999999999999999999 899999999999999754 45999999999
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC---CCCCCcchHHHHHHHHHHHHhCCCCcc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV---RKPTQKWDIYSYGVILLEMISGKLPMI 596 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlGvvl~elltG~~P~~ 596 (686)
+...... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 290 ~~~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~ 345 (419)
T 3i6u_A 290 KILGETS------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345 (419)
T ss_dssp TSCC-----------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eecCCCc------------------------cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 8654221 1123467888999999853 568889999999999999999999996
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....... +. ..+........ +.... .....+.+++.+||+.||++|||+.|++++
T Consensus 346 ~~~~~~~-~~---~~i~~~~~~~~----~~~~~-----~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 346 EHRTQVS-LK---DQITSGKYNFI----PEVWA-----EVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCSSSCC-HH---HHHHTTCCCCC----HHHHT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCcchHH-HH---HHHhcCCCCCC----chhhc-----ccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 5433221 11 11122211110 10000 123467899999999999999999999986
No 184
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-39 Score=341.30 Aligned_cols=258 Identities=23% Similarity=0.307 Sum_probs=198.7
Q ss_pred cccCccCceEEEEEEe------CCCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVAL------NNEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|.. .++..||||.+... ......++.+|+.++++++||||+++++++...+..++||||+
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 115 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM 115 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecC
Confidence 4699999999999984 24678999999754 3344567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCcc-ccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC---CCCeEEeecCcccc
Q 042348 446 PNGSLATAIHGKAGII-SYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK---NMEPHISDFGLARL 521 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~ 521 (686)
++|+|.+++....... ....+++.+++.++.|++.||+|||+ ++|+||||||+||+++. +..+||+|||+++.
T Consensus 116 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~ 192 (327)
T 2yfx_A 116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192 (327)
T ss_dssp TTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEECccccccc
Confidence 9999999998654211 11358999999999999999999999 89999999999999984 44699999999975
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~ 600 (686)
....... .......+|..|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 193 ~~~~~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 251 (327)
T 2yfx_A 193 IYRASYY---------------------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251 (327)
T ss_dssp HHC---------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ccccccc---------------------ccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH
Confidence 5322110 01122345778999999988889999999999999999998 9999954322
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
......+....... .. ......+.+++.+||+.||++||++.|++++|+.+...
T Consensus 252 -----~~~~~~~~~~~~~~---~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 252 -----QEVLEFVTSGGRMD---PP---------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp -----HHHHHHHHTTCCCC---CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----HHHHHHHhcCCCCC---CC---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 12222222221110 00 11223678899999999999999999999999987643
No 185
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.8e-39 Score=355.57 Aligned_cols=244 Identities=25% Similarity=0.375 Sum_probs=196.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||||++... .......+.+|++++++++||||+++++++.+.+..++|||||++|+
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~ 107 (486)
T 3mwu_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107 (486)
T ss_dssp EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCc
Confidence 46999999999999876 6889999998542 22345678999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec---CCCCeEEeecCccccccccc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG---KNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~~~~~~~ 526 (686)
|.+.+... ..+++..+..|+.|++.||+|||+ ++|+||||||+|||++ .++.+||+|||+++......
T Consensus 108 L~~~~~~~------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 108 LFDEIIKR------KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 99998765 358999999999999999999999 8999999999999995 55679999999997654221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .
T Consensus 179 ------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~ 228 (486)
T 3mwu_A 179 ------------------------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----Y 228 (486)
T ss_dssp ---------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----H
T ss_pred ------------------------ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----H
Confidence 1123467889999999875 589999999999999999999999954322 2
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+....+......... +.. ......+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~~~~i~~~~~~~~~---~~~------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 229 DILKRVETGKYAFDL---PQW------RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHHHHHTCCCSCS---GGG------GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHHHHHhCCCCCCC---ccc------CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 223333333222110 111 1122457899999999999999999999986
No 186
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.7e-39 Score=340.62 Aligned_cols=262 Identities=18% Similarity=0.268 Sum_probs=195.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEec--------CceeEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV--------DEKLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------~~~~lV 441 (686)
..||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++... +..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 102 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 102 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEE
Confidence 46999999999999974 688999999865432 2345788999999999999999999999874 457999
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|||+++ +|.+.+.... ..+++.++..|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 103 FDFCEH-DLAGLLSNVL-----VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp EECCSE-EHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EeccCC-CHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 999975 8888877654 458999999999999999999999 8999999999999999999999999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
......... .......||..|+|||++.+ ..++.++|||||||++|||+||+.||.....
T Consensus 174 ~~~~~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 234 (351)
T 3mi9_A 174 FSLAKNSQP-------------------NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 234 (351)
T ss_dssp CCCCSSSSC-------------------CCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccc-------------------cccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 643221100 12234567889999998876 4589999999999999999999999965332
Q ss_pred cchhHHHHHHHHHhhcCC--cccccCccc-------cc-CCCcHHH------HHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRKP--MTDILDPFL-------AH-DLDKEDE------IVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~--~~~~~d~~l-------~~-~~~~~~~------~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+........+ .....+... .. .....+. ...+.+++.+||+.||++|||+.|++++
T Consensus 235 --~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 235 --QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp --HHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --HHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 2222222222221110 000000000 00 0000111 2347899999999999999999999986
No 187
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.5e-39 Score=339.00 Aligned_cols=258 Identities=21% Similarity=0.326 Sum_probs=193.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 110 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI 110 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcch
Confidence 46999999999999976 488999999855432 234568899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 111 l~~~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 179 (331)
T 4aaa_A 111 LDDLELFP------NGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-- 179 (331)
T ss_dssp HHHHHHST------TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred HHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc--
Confidence 99887654 358999999999999999999999 8999999999999999999999999999976542211
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......||..|+|||.+.+. .++.++|||||||++|||++|+.||......+ ....
T Consensus 180 ---------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~ 236 (331)
T 4aaa_A 180 ---------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID--QLYH 236 (331)
T ss_dssp -------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH
T ss_pred ---------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHH
Confidence 11234567889999998775 78999999999999999999999995543221 1111
Q ss_pred HHHHH-----------hhcCCcccccCcccccCCCc----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLIL-----------EDRKPMTDILDPFLAHDLDK----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~-----------~~~~~~~~~~d~~l~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+.... ...........+.+...... +.....+.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 237 IMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11111 11000011111111111000 1123468899999999999999999999876
No 188
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.3e-39 Score=355.76 Aligned_cols=244 Identities=23% Similarity=0.351 Sum_probs=193.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... ++..||||.+.... ......+.+|+.++++++|||||++++++.+.+..++|||||++|+
T Consensus 43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 122 (494)
T 3lij_A 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGE 122 (494)
T ss_dssp EEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCc
Confidence 46999999999999976 57899999986542 2335678999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC---CCCeEEeecCccccccccc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK---NMEPHISDFGLARLADIAE 526 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~~~~~~ 526 (686)
|.+.+... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||+++......
T Consensus 123 L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~ 193 (494)
T 3lij_A 123 LFDEIIHR------MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193 (494)
T ss_dssp HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence 99988765 358999999999999999999999 89999999999999976 4559999999998654221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... .
T Consensus 194 ------------------------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~ 243 (494)
T 3lij_A 194 ------------------------KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-----Q 243 (494)
T ss_dssp ------------------------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----H
T ss_pred ------------------------cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-----H
Confidence 112346788899999886 5689999999999999999999999954332 2
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+....+........ .+... .....+.+++.+||+.||++|||+.|++++
T Consensus 244 ~~~~~i~~~~~~~~---~~~~~------~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 244 EILRKVEKGKYTFD---SPEWK------NVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHHHHHTCCCCC---SGGGT------TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHHHHhCCCCCC---chhcc------cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 23333333332211 11111 122357799999999999999999999875
No 189
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.2e-39 Score=357.58 Aligned_cols=244 Identities=26% Similarity=0.388 Sum_probs=198.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+.+|
T Consensus 32 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 111 (484)
T 3nyv_A 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 111 (484)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCC
Confidence 46999999999999976 68899999985432 334577999999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee---cCCCCeEEeecCcccccccc
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~ 525 (686)
+|.+++... ..+++..+..|+.|++.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 112 ~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 182 (484)
T 3nyv_A 112 ELFDEIISR------KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182 (484)
T ss_dssp BHHHHHHTC------SCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence 999999765 358999999999999999999999 899999999999999 56789999999999865422
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhH
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNI 605 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~ 605 (686)
. ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.....
T Consensus 183 ~------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~----- 232 (484)
T 3nyv_A 183 K------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE----- 232 (484)
T ss_dssp C------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----
T ss_pred c------------------------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-----
Confidence 1 1123457888999999876 689999999999999999999999954332
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+....+........ .+.. ......+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~i~~~~~~~~---~~~~------~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 233 YDILKKVEKGKYTFE---LPQW------KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HHHHHHHHHCCCCCC---SGGG------GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCCCCC---Cccc------ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 222333333322211 0111 1123467899999999999999999999875
No 190
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.8e-39 Score=341.17 Aligned_cols=245 Identities=23% Similarity=0.395 Sum_probs=195.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--------cchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--------QRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 442 (686)
..||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++++ +||||+++++++...+..++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 57999999999999986 689999999865421 1135678999999999 7999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++..+
T Consensus 180 e~~~g~~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 180 DLMRKGELFDYLTEK------VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp CCCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EeCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 999999999999754 358999999999999999999999 89999999999999999999999999999765
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC------CCCCCcchHHHHHHHHHHHHhCCCCcc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV------RKPTQKWDIYSYGVILLEMISGKLPMI 596 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDVwSlGvvl~elltG~~P~~ 596 (686)
.... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 251 ~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 306 (365)
T 2y7j_A 251 EPGE------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW 306 (365)
T ss_dssp CTTC------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCc------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCC
Confidence 4221 1123467888999998753 358899999999999999999999995
Q ss_pred ccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 597 QIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.... ......+........ .+... .....+.+++.+||+.||++|||+.|++++
T Consensus 307 ~~~~-----~~~~~~i~~~~~~~~---~~~~~------~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 307 HRRQ-----ILMLRMIMEGQYQFS---SPEWD------DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CSSH-----HHHHHHHHHTCCCCC---HHHHS------SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCH-----HHHHHHHHhCCCCCC---Ccccc------cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 4321 122222332221111 01000 112357899999999999999999999874
No 191
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.9e-41 Score=356.09 Aligned_cols=239 Identities=16% Similarity=0.175 Sum_probs=182.4
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCC---CccchHHHHHHH---HHHhccCCCCcceee-------EEEEecCc-
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNG---GWQRFKEFQTEA---EAIGKIRHPNIVSLR-------AYFWSVDE- 437 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~~~~~~~- 437 (686)
..||+|+||.||+|.. .+++.||||++... .....+.+.+|+ +++++++|||||+++ +++...+.
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 158 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 158 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSC
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCc
Confidence 4699999999999996 46899999998632 333457789999 555666899999998 66665532
Q ss_pred ----------------eeEEEeccCCCCHHHHhhcCCCccc-cCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCC
Q 042348 438 ----------------KLLIYDYIPNGSLATAIHGKAGIIS-YRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRP 500 (686)
Q Consensus 438 ----------------~~lV~e~~~~gsL~~~l~~~~~~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp 500 (686)
.++||||+ +|+|.+++........ ...+++..+..|+.||+.||+|||+ ++|+||||||
T Consensus 159 ~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDikp 234 (377)
T 3byv_A 159 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRP 234 (377)
T ss_dssp SEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred cccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence 78999999 6899999986421100 1234568889999999999999999 8999999999
Q ss_pred CCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC----------
Q 042348 501 SNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR---------- 570 (686)
Q Consensus 501 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---------- 570 (686)
+|||++.++.+||+|||+|+.... ......| ..|+|||++.+.
T Consensus 235 ~NIll~~~~~~kL~DFG~a~~~~~--------------------------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~ 287 (377)
T 3byv_A 235 VDIVLDQRGGVFLTGFEHLVRDGA--------------------------RVVSSVS-RGFEPPELEARRATISYHRDRR 287 (377)
T ss_dssp GGEEECTTCCEEECCGGGCEETTC--------------------------EEECCCC-TTCCCHHHHHHHTSTHHHHCCE
T ss_pred HHEEEcCCCCEEEEechhheecCC--------------------------cccCCCC-cCccChhhhccccccccccccc
Confidence 999999999999999999984321 1122345 679999999877
Q ss_pred -CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccc
Q 042348 571 -KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVH 649 (686)
Q Consensus 571 -~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~ 649 (686)
.++.++|||||||++|||++|+.||........ ...+... . . .....+.+++.+||+
T Consensus 288 ~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~---------------~~~~~~~-~-~-----~~~~~~~~li~~~L~ 345 (377)
T 3byv_A 288 TLMTFSFDAWALGLVIYWIWCADLPITKDAALGG---------------SEWIFRS-C-K-----NIPQPVRALLEGFLR 345 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHHHSSCCC------CC---------------SGGGGSS-C-C-----CCCHHHHHHHHHHTC
T ss_pred ccCChhhhHHHHHHHHHHHHHCCCCCcccccccc---------------hhhhhhh-c-c-----CCCHHHHHHHHHHcC
Confidence 799999999999999999999999954322110 1111110 0 0 112357889999999
Q ss_pred cCCCCCCCHHHHHHH
Q 042348 650 KSPDKRPSMRHVCDS 664 (686)
Q Consensus 650 ~dP~~RPs~~ev~~~ 664 (686)
.||++|||+.|++++
T Consensus 346 ~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 346 YPKEDRLLPLQAMET 360 (377)
T ss_dssp SSGGGCCCHHHHHTS
T ss_pred CCchhCCCHHHHhhC
Confidence 999999999999874
No 192
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=333.53 Aligned_cols=244 Identities=24% Similarity=0.394 Sum_probs=193.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
..||+|+||.||+|... +++.||||.+.... ..+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (314)
T 3com_A 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112 (314)
T ss_dssp EECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHH
Confidence 46999999999999876 48899999987643 3467899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPEV 531 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 531 (686)
+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 113 ~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---- 180 (314)
T 3com_A 113 DIIRLRN-----KTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA---- 180 (314)
T ss_dssp HHHHHHT-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS----
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc----
Confidence 9997433 468999999999999999999999 8999999999999999999999999999976532211
Q ss_pred cccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHH
Q 042348 532 HWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQL 611 (686)
Q Consensus 532 ~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 611 (686)
......||..|+|||.+.+..++.++||||||+++|||++|+.||...... .....
T Consensus 181 -------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~ 236 (314)
T 3com_A 181 -------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-----RAIFM 236 (314)
T ss_dssp -------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH
T ss_pred -------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-----HHHHH
Confidence 112345778899999999888999999999999999999999999543321 11112
Q ss_pred HHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 612 ILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 612 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+ ....+ ......+.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~--~~~~~--------~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 237 IPTNPPP--TFRKP--------ELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HHHSCCC--CCSSG--------GGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HhcCCCc--ccCCc--------ccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 2222111 11011 1122467899999999999999999999875
No 193
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.3e-39 Score=331.15 Aligned_cols=243 Identities=23% Similarity=0.401 Sum_probs=198.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 107 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA 107 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcH
Confidence 46999999999999865 58899999986543 33457899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++........
T Consensus 108 ~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--- 174 (303)
T 3a7i_A 108 LDLLEP-------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--- 174 (303)
T ss_dssp HHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC---
T ss_pred HHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCcccc---
Confidence 999864 358999999999999999999999 8999999999999999999999999999976542211
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHH
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQ 610 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~ 610 (686)
......||..|+|||.+.+..++.++||||||+++|||++|+.||...... ....
T Consensus 175 --------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~ 229 (303)
T 3a7i_A 175 --------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLF 229 (303)
T ss_dssp --------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHH
T ss_pred --------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHH
Confidence 112345788899999999889999999999999999999999999543221 1122
Q ss_pred HHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 042348 611 LILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSL 665 (686)
Q Consensus 611 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 665 (686)
.+.....+ .+... ....+.+++.+||+.||++|||+.|++++.
T Consensus 230 ~~~~~~~~-------~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 230 LIPKNNPP-------TLEGN-----YSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp HHHHSCCC-------CCCSS-----CCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred HhhcCCCC-------CCccc-----cCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 22222111 11111 123578999999999999999999998864
No 194
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.2e-39 Score=332.67 Aligned_cols=252 Identities=20% Similarity=0.305 Sum_probs=196.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEe--cCceeEEEeccCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS--VDEKLLIYDYIPN 447 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lV~e~~~~ 447 (686)
..||+|+||.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.. .+..++||||+++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~ 91 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 91 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTT
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCC
Confidence 46999999999999876 68899999986542 3345678999999999999999999998864 5678999999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC-----ceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR-----YVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-----iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
|+|.+++...... ...+++..+..++.|++.||+|||+ ++ |+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 92 GDLASVITKGTKE--RQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp EEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCHHHHHHhhccc--CCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 9999999754211 1358999999999999999999999 66 999999999999999999999999999865
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
..... ......||..|+|||.+.+..++.++||||||+++|||++|+.||.....
T Consensus 167 ~~~~~-----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-- 221 (279)
T 2w5a_A 167 NHDTS-----------------------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-- 221 (279)
T ss_dssp ---CH-----------------------HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred ccccc-----------------------cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--
Confidence 42110 11123467789999999988899999999999999999999999954432
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
......+.....+ . +. . .....+.+++.+||+.||++|||+.||++++....
T Consensus 222 ---~~~~~~i~~~~~~--~-~~----~-----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 222 ---KELAGKIREGKFR--R-IP----Y-----RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp ---HHHHHHHHHTCCC--C-CC----T-----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred ---HHHHHHHhhcccc--c-CC----c-----ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 1222233332211 1 01 0 12236788999999999999999999998776543
No 195
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=351.13 Aligned_cols=264 Identities=21% Similarity=0.293 Sum_probs=181.3
Q ss_pred hcccCccCceEEEEEEeC---CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEe--cCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALN---NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS--VDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lV~e~~~ 446 (686)
+..||+|+||.||+|... +++.||||++..... ...+.+|++++++++|||||++++++.. ....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 346999999999999975 478899999976432 3578899999999999999999999965 567899999996
Q ss_pred CCCHHHHhhcCCCc---cccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee----cCCCCeEEeecCcc
Q 042348 447 NGSLATAIHGKAGI---ISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL----GKNMEPHISDFGLA 519 (686)
Q Consensus 447 ~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGla 519 (686)
|+|.+++...... .....+++..++.|+.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+|
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 5888887632210 011358999999999999999999999 899999999999999 67889999999999
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCcccc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQI 598 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~ 598 (686)
+........ ........||..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 180 ~~~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 180 RLFNSPLKP--------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp C------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred eecCCCCcc--------------------cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 865422110 0122345678899999998774 5899999999999999999999999543
Q ss_pred Cccc-------hhHHHHHHHHHhhcCCcccccCccccc-----------------CCCcHH--------HHHHHHHHHHh
Q 042348 599 GSME-------LNIVQWIQLILEDRKPMTDILDPFLAH-----------------DLDKED--------EIVSVLKIALD 646 (686)
Q Consensus 599 ~~~~-------~~~~~~~~~~~~~~~~~~~~~d~~l~~-----------------~~~~~~--------~~~~l~~l~~~ 646 (686)
.... .+....+..... .+..... +.+.. ...... ....+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~l~~i~~~~g--~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 316 (405)
T 3rgf_A 240 QEDIKTSNPYHHDQLDRIFNVMG--FPADKDW-EDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQK 316 (405)
T ss_dssp C------CCCCHHHHHHHHHHHC--CCCTTTC-GGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHH
T ss_pred cccccccccchHHHHHHHHHhhC--CCChhhc-chhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHH
Confidence 3210 111111111111 0100000 00000 000000 02357799999
Q ss_pred ccccCCCCCCCHHHHHHH
Q 042348 647 CVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 647 cl~~dP~~RPs~~ev~~~ 664 (686)
||+.||++|||+.|++++
T Consensus 317 ~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 317 LLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HSCSSGGGSCCHHHHHTS
T ss_pred HccCCcccCCCHHHHhcC
Confidence 999999999999999987
No 196
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6.5e-39 Score=330.80 Aligned_cols=256 Identities=21% Similarity=0.304 Sum_probs=193.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 87 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD 87 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CC
Confidence 46999999999999976 68899999986542 2234678899999999999999999999999999999999997 69
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETP 529 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 529 (686)
|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 88 L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-- 158 (299)
T 2r3i_A 88 LKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-- 158 (299)
T ss_dssp HHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB--
T ss_pred HHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc--
Confidence 9999976542 358999999999999999999999 8999999999999999999999999999976532110
Q ss_pred cccccccccCCCCCCCccccccccCCCCCccccCcccccCCC-CCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 530 EVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK-PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 530 ~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
......+|..|+|||.+.+.. ++.++|||||||++|||+||+.||...... + .
T Consensus 159 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~---~ 212 (299)
T 2r3i_A 159 ---------------------TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--D---Q 212 (299)
T ss_dssp ---------------------CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--H---H
T ss_pred ---------------------ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH--H---H
Confidence 112335677899999987765 799999999999999999999999653321 1 1
Q ss_pred HHHHHhhcCCcccc----------cCcccccCCC------cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 609 IQLILEDRKPMTDI----------LDPFLAHDLD------KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 609 ~~~~~~~~~~~~~~----------~d~~l~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+........+. ..+....... ......++.+++.+||+.||++|||+.|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 213 LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 12222211110000 0000000000 00122467899999999999999999999874
No 197
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7.5e-40 Score=336.37 Aligned_cols=254 Identities=24% Similarity=0.385 Sum_probs=191.6
Q ss_pred cccCccCceEEEEEEeC--CCc--eEEEEEcCCC---CccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN--NEE--AVAVRRLGNG---GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|.+. ++. .||||.++.. .....+++.+|++++++++||||+++++++...+ .++||||+
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~ 102 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELA 102 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECC
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecc
Confidence 46999999999999863 233 6899988654 2234577899999999999999999999998654 88999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 103 ~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 103 PLGSLLDRLRKHQ-----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp TTCBHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred cCCCHHHHHHhcc-----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 9999999998653 358999999999999999999999 89999999999999999999999999999865432
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~ 604 (686)
... ........+|..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 175 ~~~--------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---- 230 (291)
T 1u46_A 175 DDH--------------------YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---- 230 (291)
T ss_dssp CCE--------------------EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH----
T ss_pred ccc--------------------hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH----
Confidence 210 011123445778999999988888999999999999999999 9999954432
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccccc
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIS 671 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 671 (686)
.+....+......... .......+.+++.+||+.||++|||+.++++.|+++...
T Consensus 231 -~~~~~~~~~~~~~~~~-----------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 231 -SQILHKIDKEGERLPR-----------PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -HHHHHHHHTSCCCCCC-----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -HHHHHHHHccCCCCCC-----------CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 2223333322211110 011234688999999999999999999999999988743
No 198
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.5e-39 Score=330.65 Aligned_cols=240 Identities=20% Similarity=0.255 Sum_probs=190.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|... +++.||||++... ......++.+|+..+.++ +||||+++++++.+.+..++||||+++|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 96 (289)
T 1x8b_A 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG 96 (289)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred hhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCC
Confidence 46999999999999976 6899999998653 233456788999999999 9999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-------------------C
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-------------------M 509 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-------------------~ 509 (686)
+|.+++...... ...+++..+..|+.|++.||+|||+ ++|+||||||+||+++.+ .
T Consensus 97 ~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 97 SLADAISENYRI--MSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp BHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------------------CC
T ss_pred cHHHHHHhhccc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999764211 1358999999999999999999999 899999999999999844 4
Q ss_pred CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHH
Q 042348 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEM 588 (686)
Q Consensus 510 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~el 588 (686)
.+||+|||.++..... ....||..|+|||.+.+. .++.++|||||||++|||
T Consensus 172 ~~kl~Dfg~~~~~~~~---------------------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 224 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSP---------------------------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCA 224 (289)
T ss_dssp CEEECCCTTCEETTCS---------------------------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred EEEEcccccccccCCc---------------------------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHH
Confidence 7999999998755321 123467789999998765 567899999999999999
Q ss_pred HhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 589 ISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 589 ltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
++|..|+... .. ...+..... .. +... ....+.+++.+||+.||++|||+.|++++
T Consensus 225 ~~~~~~~~~~-----~~---~~~~~~~~~--~~-----~~~~-----~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 225 AGAEPLPRNG-----DQ---WHEIRQGRL--PR-----IPQV-----LSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TTCCCCCSSS-----HH---HHHHHTTCC--CC-----CSSC-----CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred hcCCCCCcch-----hH---HHHHHcCCC--CC-----CCcc-----cCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 9999776321 11 112222211 11 1111 12357889999999999999999999875
No 199
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9e-39 Score=334.64 Aligned_cols=253 Identities=19% Similarity=0.276 Sum_probs=192.7
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEEEe--cCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWS--VDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--~~~~~lV~e~~~~g 448 (686)
+.||+|+||.||+|.. .+++.||||.+... ..+.+.+|++++++++ ||||+++++++.. ....++||||++++
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 4699999999999986 46889999999753 3467899999999997 9999999999988 56789999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC-CeEEeecCcccccccccC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM-EPHISDFGLARLADIAEE 527 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~~~ 527 (686)
+|.+++. .+++.++..++.|++.||+|||+ ++|+||||||+|||++.++ .+||+|||+++.......
T Consensus 119 ~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 119 DFKQLYQ---------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp CHHHHGG---------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred hHHHHHH---------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999884 37899999999999999999999 8999999999999999776 899999999986542211
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
.....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.........+.
T Consensus 187 ------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~ 242 (330)
T 3nsz_A 187 ------------------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242 (330)
T ss_dssp ------------------------CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred ------------------------cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHH
Confidence 123456778999999877 6789999999999999999999999955433322222
Q ss_pred HHHHHH---------HhhcCCcccccC--------cc---cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLI---------LEDRKPMTDILD--------PF---LAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~---------~~~~~~~~~~~d--------~~---l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...... ...........+ .. .............+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111110 000000000000 00 00000011123568899999999999999999999875
No 200
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.1e-39 Score=354.45 Aligned_cols=244 Identities=23% Similarity=0.333 Sum_probs=193.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-------------cchHHHHHHHHHHhccCCCCcceeeEEEEecCce
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-------------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK 438 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 438 (686)
..||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 121 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF 121 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 46999999999999976 578999999865321 2346789999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC---CeEEee
Q 042348 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM---EPHISD 515 (686)
Q Consensus 439 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~D 515 (686)
++|||||++|+|.+++... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||++.++ .+||+|
T Consensus 122 ~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 122 YLVTEFYEGGELFEQIINR------HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp EEEEECCTTCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 9999999999999998764 358999999999999999999999 8999999999999998775 699999
Q ss_pred cCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 516 FGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 516 fGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||
T Consensus 193 fg~a~~~~~~~------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf 247 (504)
T 3q5i_A 193 FGLSSFFSKDY------------------------KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPF 247 (504)
T ss_dssp CTTCEECCTTS------------------------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCCCEEcCCCC------------------------ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCC
Confidence 99998654221 112346788899999987 46899999999999999999999999
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... .+.+..+......... +.. ......+.+++.+||+.||.+|||+.|++++
T Consensus 248 ~~~~~-----~~~~~~i~~~~~~~~~---~~~------~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 248 GGQND-----QDIIKKVEKGKYYFDF---NDW------KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCSSH-----HHHHHHHHHCCCCCCH---HHH------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCH-----HHHHHHHHcCCCCCCc---ccc------CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 54332 2223333333221110 000 0112357899999999999999999999876
No 201
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-39 Score=355.14 Aligned_cols=209 Identities=19% Similarity=0.308 Sum_probs=149.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec-----CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-----DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lV~e~ 444 (686)
..||+|+||.||+|... +++.||||++... .....+++.+|+++|++++|||||++++++... +..++||||
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 138 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI 138 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECC
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEec
Confidence 46999999999999865 6889999998653 333457789999999999999999999999543 568999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+ +|+|.+++... ..+++..+..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+....
T Consensus 139 ~-~~~L~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 139 A-DSDFKKLFRTP------VYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp C-SEEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred c-ccchhhhcccC------CCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 8 57999999764 459999999999999999999999 8999999999999999999999999999987653
Q ss_pred ccCCccccccc-cccC---CCCCCCccccccccCCCCCccccCcccc-cCCCCCCcchHHHHHHHHHHHHhC
Q 042348 525 AEETPEVHWEQ-STTG---TPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISG 591 (686)
Q Consensus 525 ~~~~~~~~~~~-~~~g---~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwSlGvvl~elltG 591 (686)
........... .... ................+||..|+|||++ ....++.++|||||||++|||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 32110000000 0000 0000000001233456789999999976 556799999999999999999993
No 202
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.1e-38 Score=348.46 Aligned_cols=260 Identities=18% Similarity=0.245 Sum_probs=199.6
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCC-CCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRH-PNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|.. .+++.||||++..... ..++.+|+++++.++| ++|+.+..++...+..++||||+ +++|
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 3699999999999986 4688999998765432 2468899999999976 56666666777778889999999 9999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee---cCCCCeEEeecCcccccccccC
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL---GKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~~~ 527 (686)
.+++.... ..+++.+++.|+.||+.||+|||+ ++||||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 90 ~~ll~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 90 EDLFNFCS-----RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 99998543 469999999999999999999999 899999999999999 6889999999999987653321
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.... .+.......||..|+|||++.+..++.++|||||||++|||++|+.||........ ..
T Consensus 162 ~~~~----------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~ 223 (483)
T 3sv0_A 162 HQHI----------------PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQ 223 (483)
T ss_dssp CCBC----------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HH
T ss_pred cccc----------------ccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HH
Confidence 1100 01122346788999999999999999999999999999999999999965443221 11
Q ss_pred HHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhccc
Q 042348 608 WIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVN 669 (686)
Q Consensus 608 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 669 (686)
.+..+..... ..... .+.. ....++.+++..||+.+|++||++.+|++.|+++.
T Consensus 224 ~~~~i~~~~~--~~~~~-~l~~-----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 224 KYEKISEKKV--ATSIE-ALCR-----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HHHHHHHHHH--HSCHH-HHHT-----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHhhccc--cccHH-HHhc-----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 1222211110 00000 0000 11246889999999999999999999999998874
No 203
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8e-39 Score=346.58 Aligned_cols=191 Identities=20% Similarity=0.298 Sum_probs=164.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc------CCCCcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI------RHPNIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||||++.... ...+++.+|+++++.+ .|+||+++++++...+..++||||+
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 47999999999999865 47899999997642 2345678899888887 5779999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC--eEEeecCcccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME--PHISDFGLARLAD 523 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~--~kl~DfGla~~~~ 523 (686)
. ++|.+++..... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||++.++. +||+|||+++...
T Consensus 182 ~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 182 S-MNLYELIKKNKF----QGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp C-CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred C-CCHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 5 699999986542 458999999999999999999999 89999999999999999887 9999999997532
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCcccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQI 598 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~ 598 (686)
.. .....||..|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 254 ~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 254 QR--------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CC--------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cc--------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 11 12346788899999999989999999999999999999999999654
No 204
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-38 Score=335.00 Aligned_cols=255 Identities=21% Similarity=0.287 Sum_probs=196.6
Q ss_pred cccCccCceEEEEEEe--CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCC------CcceeeEEEEecCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVAL--NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHP------NIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~------nIv~l~~~~~~~~~~~lV~e~ 444 (686)
..||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++|+ +|+++++++...+..++||||
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 98 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFEL 98 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcC
Confidence 4699999999999986 357899999997543 3346788999999998765 499999999999999999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-----------------
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK----------------- 507 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~----------------- 507 (686)
+ +++|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.
T Consensus 99 ~-~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 99 L-GLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp C-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred C-CCCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9 8899999986542 368999999999999999999999 89999999999999987
Q ss_pred --CCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHH
Q 042348 508 --NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVIL 585 (686)
Q Consensus 508 --~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl 585 (686)
++.+||+|||+++..... .....||..|+|||++.+..++.++|||||||++
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 224 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEH--------------------------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCIL 224 (339)
T ss_dssp ESCCCEEECCCSSCEETTSC--------------------------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccc--------------------------cccccCCccccChHHhhCCCCCcchhhHHHHHHH
Confidence 678999999999753311 1234578889999999998999999999999999
Q ss_pred HHHHhCCCCccccCccchhHHHHHHHHHhhcCC-------ccc---------------------ccCcccccCCCcHHHH
Q 042348 586 LEMISGKLPMIQIGSMELNIVQWIQLILEDRKP-------MTD---------------------ILDPFLAHDLDKEDEI 637 (686)
Q Consensus 586 ~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------------~~d~~l~~~~~~~~~~ 637 (686)
|||++|+.||...... +....+......... ... ...+............
T Consensus 225 ~el~~g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (339)
T 1z57_A 225 IEYYLGFTVFPTHDSK--EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302 (339)
T ss_dssp HHHHHSSCSCCCSCHH--HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHH
T ss_pred HHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhH
Confidence 9999999999654322 222222222111000 000 0000000011123456
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 638 VSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 638 ~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+.+++.+||+.||++|||+.|++++
T Consensus 303 ~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 303 ERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 678999999999999999999999876
No 205
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=328.85 Aligned_cols=245 Identities=20% Similarity=0.291 Sum_probs=191.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC----ccchHHHHHHHHHHhccCCCCcceeeEEEE--ecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG----WQRFKEFQTEAEAIGKIRHPNIVSLRAYFW--SVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~~~~lV~e~~ 445 (686)
..||+|+||.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++. +.+..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC 90 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhc
Confidence 46999999999999975 57899999987532 233567999999999999999999999985 445789999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
+++ |.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~~~-l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 91 VCG-MQEMLDSVPE----KRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp SEE-HHHHHHHSTT----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred cCC-HHHHHHhCcc----cccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 876 7777765432 468999999999999999999999 89999999999999999999999999999865422
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCC--CCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRK--PTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... .......||..|+|||++.+.. ++.++||||||+++|||++|+.||....
T Consensus 163 ~~~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---- 217 (305)
T 2wtk_C 163 AAD---------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN---- 217 (305)
T ss_dssp CSS---------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS----
T ss_pred ccc---------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch----
Confidence 110 1112345788899999987644 3779999999999999999999995432
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.......+......... .....+.+++.+||+.||++|||+.|++++
T Consensus 218 -~~~~~~~i~~~~~~~~~-------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 218 -IYKLFENIGKGSYAIPG-------------DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -HHHHHHHHHHCCCCCCS-------------SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -HHHHHHHHhcCCCCCCC-------------ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22223333333222111 112357789999999999999999999976
No 206
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.4e-39 Score=346.58 Aligned_cols=248 Identities=13% Similarity=0.057 Sum_probs=174.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhcc--CCCCcceee-------EEEEecC---
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKI--RHPNIVSLR-------AYFWSVD--- 436 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~H~nIv~l~-------~~~~~~~--- 436 (686)
..||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.+ +||||++++ +++...+
T Consensus 68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~ 147 (371)
T 3q60_A 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPP 147 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCS
T ss_pred eeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCC
Confidence 46999999999999975 688999999977532 3345677885544444 699988755 4554332
Q ss_pred --------------ceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHH------HHHHHHHHHHHHHHHccCCCCceec
Q 042348 437 --------------EKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDR------LRIIKGVAKGIAFLHEVSPKRYVHG 496 (686)
Q Consensus 437 --------------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~------~~i~~~ia~gL~~LH~~~~~~iiHr 496 (686)
..++|||||+ |+|.+++.... ..+++..+ ..++.||+.||+|||+ ++|+||
T Consensus 148 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivHr 218 (371)
T 3q60_A 148 FAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-----FVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVHG 218 (371)
T ss_dssp SSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEET
T ss_pred eeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-----cccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCccC
Confidence 3799999998 89999998653 23566666 7888999999999999 899999
Q ss_pred CCCCCCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCC
Q 042348 497 DLRPSNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQ 574 (686)
Q Consensus 497 Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ 574 (686)
||||+|||++.++.+||+|||+|+...... ....+|..|+|||++.+ ..++.
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~--------------------------~~~~~t~~y~aPE~~~~~~~~~~~ 272 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRG--------------------------PASSVPVTYAPREFLNASTATFTH 272 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEE--------------------------EGGGSCGGGCCHHHHTCSEEECCH
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCc--------------------------cCccCCcCCcChhhccCCCCCcCc
Confidence 999999999999999999999998543211 12334578999999987 67999
Q ss_pred cchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCC
Q 042348 575 KWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDK 654 (686)
Q Consensus 575 ~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~ 654 (686)
++|||||||++|||+||+.||.......... ................. ........+.+++.+||+.||++
T Consensus 273 ~~DiwSlG~il~elltg~~Pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~ 343 (371)
T 3q60_A 273 ALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS--------WKRPSLRVPGTDSLAFG-SCTPLPDFVKTLIGRFLNFDRRR 343 (371)
T ss_dssp HHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC--------CCBCCTTSCCCCSCCCT-TSSCCCHHHHHHHHHHTCSSTTT
T ss_pred cccHHHHHHHHHHHHhCCCCCCCcCcccccc--------hhhhhhhhccccccchh-hccCCCHHHHHHHHHHcCCChhh
Confidence 9999999999999999999996543221100 00000000000000000 00112346889999999999999
Q ss_pred CCCHHHHHHH
Q 042348 655 RPSMRHVCDS 664 (686)
Q Consensus 655 RPs~~ev~~~ 664 (686)
|||+.|++++
T Consensus 344 Rpt~~e~l~h 353 (371)
T 3q60_A 344 RLLPLEAMET 353 (371)
T ss_dssp CCCHHHHTTS
T ss_pred CCCHHHHhcC
Confidence 9999999864
No 207
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=337.91 Aligned_cols=260 Identities=19% Similarity=0.264 Sum_probs=181.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEEEe--------cCceeEEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWS--------VDEKLLIY 442 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--------~~~~~lV~ 442 (686)
..||+|+||.||+|... +++.||||++........+.+.+|+.++.++. ||||+++++++.. ....++||
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~ 113 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLT 113 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEE
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEE
Confidence 46999999999999975 68899999986665556678999999999996 9999999999953 23478999
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCC--ceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKR--YVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
||+. |+|.+++...... ..+++.+++.|+.|++.||+|||+ ++ |+||||||+|||++.++.+||+|||+++
T Consensus 114 e~~~-g~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 114 ELCK-GQLVEFLKKMESR---GPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp ECCS-EEHHHHHHHHHTT---CSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EecC-CCHHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 9995 7999988752211 469999999999999999999999 77 9999999999999999999999999998
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccc---cCCCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS---KVRKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
............. ............+|..|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 187 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 187 TISHYPDYSWSAQ-----------RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp CCSSCC------------------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred eccccCccccccc-----------ccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 7653221100000 00000111234578889999998 566789999999999999999999999953
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
..... .......... ... ....+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 256 ~~~~~---------~~~~~~~~~~------~~~-----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 256 GAKLR---------IVNGKYSIPP------HDT-----QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -------------------CCCCT------TCC-----SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhHHH---------hhcCcccCCc------ccc-----cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22111 1111111000 000 11236689999999999999999999999998764
No 208
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.1e-39 Score=340.86 Aligned_cols=251 Identities=23% Similarity=0.294 Sum_probs=186.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lV~e 443 (686)
..||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e 110 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEE
Confidence 46999999999999865 5889999998653 2334567889999999999999999999998665 6799999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|++ |+|.+.+. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 111 ~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 111 LMD-ANLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp CCS-EEHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred cCC-CCHHHHHh--------hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 997 58888885 248899999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... ......||..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 179 ~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-- 232 (371)
T 2xrw_A 179 TSF------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-- 232 (371)
T ss_dssp -----------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred ccc------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 211 112346788899999999989999999999999999999999999653321
Q ss_pred hHHHHHHHHHhhc-CCcccc--------------------------cCcccccCCC--cHHHHHHHHHHHHhccccCCCC
Q 042348 604 NIVQWIQLILEDR-KPMTDI--------------------------LDPFLAHDLD--KEDEIVSVLKIALDCVHKSPDK 654 (686)
Q Consensus 604 ~~~~~~~~~~~~~-~~~~~~--------------------------~d~~l~~~~~--~~~~~~~l~~l~~~cl~~dP~~ 654 (686)
..+..+.... .+.++. +......... .......+.+++.+||+.||++
T Consensus 233 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 309 (371)
T 2xrw_A 233 ---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 309 (371)
T ss_dssp ---HHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGG
T ss_pred ---HHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhh
Confidence 1112221110 000000 0000000000 1123557889999999999999
Q ss_pred CCCHHHHHHH
Q 042348 655 RPSMRHVCDS 664 (686)
Q Consensus 655 RPs~~ev~~~ 664 (686)
|||++|++++
T Consensus 310 R~t~~e~l~h 319 (371)
T 2xrw_A 310 RISVDEALQH 319 (371)
T ss_dssp SCCHHHHHHS
T ss_pred CCCHHHHhCC
Confidence 9999999986
No 209
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.6e-39 Score=335.85 Aligned_cols=261 Identities=25% Similarity=0.402 Sum_probs=180.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|... +++.||||++.... ....+++.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 100 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBH
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCch
Confidence 46999999999999864 67899999986542 23356788999999999999999999999999999999999999999
Q ss_pred HHHhhcCC--CccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 451 ATAIHGKA--GIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 451 ~~~l~~~~--~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
.+++.... +......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 177 (303)
T 2vwi_A 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177 (303)
T ss_dssp HHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----
T ss_pred HHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCc
Confidence 99987411 00011458999999999999999999999 89999999999999999999999999999865432210
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQ 607 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~ 607 (686)
.. ........||..|+|||.+.+ ..++.++||||||+++|||++|+.||........
T Consensus 178 ~~------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---- 235 (303)
T 2vwi_A 178 TR------------------NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV---- 235 (303)
T ss_dssp ----------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH----
T ss_pred cc------------------hhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH----
Confidence 00 011123457888999999865 5689999999999999999999999965433221
Q ss_pred HHHHHHhhcCCc-cc-ccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 608 WIQLILEDRKPM-TD-ILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 608 ~~~~~~~~~~~~-~~-~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.........+. .. ..++.... .....+.+++.+||+.||++|||+.|++++
T Consensus 236 -~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 236 -LMLTLQNDPPSLETGVQDKEMLK-----KYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -HHHHHTSSCCCTTC-----CCCC-----CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -HHHHhccCCCccccccccchhhh-----hhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11122221111 00 01111111 122357889999999999999999999875
No 210
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.9e-39 Score=337.03 Aligned_cols=247 Identities=19% Similarity=0.310 Sum_probs=191.2
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCC-ccchHHHHHHHHH-HhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGG-WQRFKEFQTEAEA-IGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|.. .+++.||||++.... .....++..|+.+ ++.++||||+++++++...+..++||||+++ +
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 135 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-S 135 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-E
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-c
Confidence 3699999999999986 468899999997642 2334556666666 7788999999999999999999999999975 9
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC-CceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK-RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
|.+++..... ....+++..+..|+.||+.||+|||+ + +|+||||||+|||++.++.+||+|||+++......
T Consensus 136 L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-- 208 (340)
T 3an0_A 136 LDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV-- 208 (340)
T ss_dssp HHHHHHHHHH--TSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHH--
T ss_pred HHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceeccccc--
Confidence 9998864210 01469999999999999999999998 6 99999999999999999999999999998653211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc----CCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK----VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
......||..|+|||++. ...++.++|||||||++|||+||+.||.......
T Consensus 209 ----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~-- 264 (340)
T 3an0_A 209 ----------------------AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-- 264 (340)
T ss_dssp ----------------------HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH--
T ss_pred ----------------------ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH--
Confidence 111235778899999964 3468999999999999999999999996533221
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+........+. .. ......++.+++.+||+.||++|||+.|++++
T Consensus 265 --~~~~~~~~~~~~~--~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 265 --QQLKQVVEEPSPQ--LP---------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp --HHHHHHHHSCCCC--CC---------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --HHHHHHhcCCCCC--CC---------cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1122222222111 00 01123468899999999999999999999875
No 211
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8.9e-39 Score=343.55 Aligned_cols=257 Identities=19% Similarity=0.220 Sum_probs=193.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC--------CCCcceeeEEEE----ecCcee
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR--------HPNIVSLRAYFW----SVDEKL 439 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~----~~~~~~ 439 (686)
..||+|+||.||+|... +++.||||++.... ...+.+.+|++++++++ |+||+++++++. .....+
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 46999999999999864 57899999997542 33467889999999995 788999999998 456789
Q ss_pred EEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC-CceecCCCCCCeeecCCC---------
Q 042348 440 LIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK-RYVHGDLRPSNILLGKNM--------- 509 (686)
Q Consensus 440 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~iiHrDlkp~NILl~~~~--------- 509 (686)
+||||+ +++|.+.+..... ..+++..++.|+.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp EEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred EEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhhhhh
Confidence 999999 5677666654432 468999999999999999999999 8 999999999999999775
Q ss_pred ----------------------------------------CeEEeecCcccccccccCCccccccccccCCCCCCCcccc
Q 042348 510 ----------------------------------------EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEF 549 (686)
Q Consensus 510 ----------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 549 (686)
.+||+|||+++.....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~------------------------ 249 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH------------------------ 249 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC------------------------
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc------------------------
Confidence 8999999999765321
Q ss_pred ccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccc----hhHHHHHHHHHhhc--------C
Q 042348 550 TALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSME----LNIVQWIQLILEDR--------K 617 (686)
Q Consensus 550 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~----~~~~~~~~~~~~~~--------~ 617 (686)
.....||..|+|||++.+..++.++|||||||++|||+||+.||....... .+....+....... .
T Consensus 250 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 327 (397)
T 1wak_A 250 --FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGK 327 (397)
T ss_dssp --SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCT
T ss_pred --CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccc
Confidence 123457888999999999899999999999999999999999996544322 11111111111110 0
Q ss_pred CcccccCcc--c----------------ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 618 PMTDILDPF--L----------------AHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 618 ~~~~~~d~~--l----------------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
...+.+... + ............+.+++.+||+.||++|||+.|++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 328 YSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp TGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred ccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000000000 0 0001124456678999999999999999999999864
No 212
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.8e-39 Score=333.31 Aligned_cols=247 Identities=18% Similarity=0.284 Sum_probs=179.8
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc-cc-hHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-QR-FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||||++..... .. .+.+.++...++.++||||+++++++.+.+..++||||++ |+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 91 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TS 91 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EE
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cc
Confidence 46999999999999974 688999999976422 22 2334455556888899999999999999999999999997 58
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC-CceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK-RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
|.+++..... ....+++..+..|+.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 l~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 165 (290)
T 3fme_A 92 LDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA- 165 (290)
T ss_dssp HHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred hHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc-
Confidence 8888764211 01469999999999999999999999 7 999999999999999999999999999976542211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccc----cCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS----KVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.....||..|+|||.+ .+..++.++|||||||++|||+||+.||........
T Consensus 166 -----------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~- 221 (290)
T 3fme_A 166 -----------------------KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ- 221 (290)
T ss_dssp ---------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-
T ss_pred -----------------------ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-
Confidence 1123567789999995 556789999999999999999999999964333222
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+........+ .... ......+.+++.+||+.||++|||+.|++++
T Consensus 222 ---~~~~~~~~~~~--~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 222 ---QLKQVVEEPSP--QLPA---------DKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp ---HHHHHHHSCCC--CCCT---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---HHHHHhccCCC--Cccc---------ccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 12222222111 1100 1122357899999999999999999999874
No 213
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2e-38 Score=326.88 Aligned_cols=245 Identities=24% Similarity=0.367 Sum_probs=195.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC---------ccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG---------WQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV 441 (686)
..||+|+||.||+|... +++.||||.+.... ....+.+.+|+++++++. ||||+++++++...+..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEE
Confidence 46999999999999976 57899999986532 112356889999999995 99999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 442 YDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 442 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 103 FDLMKKGELFDYLTEK------VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EECCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EeccCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 9999999999999764 358999999999999999999999 8999999999999999999999999999976
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc------CCCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK------VRKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
..... ......+|..|+|||++. ...++.++||||||+++|||++|+.||
T Consensus 174 ~~~~~------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 229 (298)
T 1phk_A 174 LDPGE------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229 (298)
T ss_dssp CCTTC------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCCCc------------------------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCC
Confidence 54221 112345678899999874 456889999999999999999999999
Q ss_pred cccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... ......+........ .+. .......+.+++.+||+.||++|||+.|++++
T Consensus 230 ~~~~~-----~~~~~~~~~~~~~~~---~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 230 WHRKQ-----MLMLRMIMSGNYQFG---SPE------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp CCSSH-----HHHHHHHHHTCCCCC---TTT------GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred cCccH-----HHHHHHHhcCCcccC---ccc------ccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 54322 122233333222111 110 01223468899999999999999999999864
No 214
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.4e-39 Score=341.27 Aligned_cols=251 Identities=21% Similarity=0.327 Sum_probs=176.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec------CceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV------DEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lV~e 443 (686)
..||+|+||.||+|... +++.||||++... .....+++.+|++++++++||||+++++++... ...++|||
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e 114 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 114 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEec
Confidence 46999999999999864 6889999999653 233456788999999999999999999999754 56799999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+ +++|.+++.. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 115 ~~-~~~L~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 115 LM-GADLNNIVKC-------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CC-CEECC------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred cc-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 99 7899998864 358999999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.. .....||..|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 184 ~~--------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-- 235 (367)
T 2fst_X 184 DE--------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-- 235 (367)
T ss_dssp ---------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--
T ss_pred cc--------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--
Confidence 11 123467888999999876 6789999999999999999999999954332
Q ss_pred hhHHHHHHHHHhhcCCcccccCcc-----------ccc--CCCc----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPF-----------LAH--DLDK----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~-----------l~~--~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+....+...... +..+..... +.. .... ......+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~l~~i~~~~g~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 236 IDQLKLILRLVGT--PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHHHHCS--CCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHhCC--CCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 2222222221111 100000000 000 0000 0112457899999999999999999999987
No 215
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=333.25 Aligned_cols=245 Identities=24% Similarity=0.369 Sum_probs=189.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEe------cCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWS------VDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~------~~~~~lV~e~ 444 (686)
..||+|+||.||+|... +++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. .+..++||||
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 46999999999999974 68899999986543 2347789999999999 89999999999987 4578999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++|+|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.....
T Consensus 109 ~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 109 CGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181 (326)
T ss_dssp CTTEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred CCCCcHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence 999999999986532 468999999999999999999999 8999999999999999999999999999875532
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCccccC
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGKLPMIQIG 599 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~ 599 (686)
... ......||..|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 182 ~~~-----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 238 (326)
T 2x7f_A 182 TVG-----------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238 (326)
T ss_dssp --------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred Ccc-----------------------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 110 112345788899999986 5668999999999999999999999995433
Q ss_pred ccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 600 SMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.. .....+..... .....+ .....+.+++.+||+.||++||++.|++++
T Consensus 239 ~~-----~~~~~~~~~~~--~~~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 239 PM-----RALFLIPRNPA--PRLKSK---------KWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HH-----HHHHHHHHSCC--CCCSCS---------CSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HH-----HHHHHhhcCcc--ccCCcc---------ccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 21 11122222211 111111 112367889999999999999999999885
No 216
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.9e-39 Score=334.85 Aligned_cols=245 Identities=21% Similarity=0.320 Sum_probs=188.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc--------cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW--------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
..||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++...+ .++|||
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e 94 (322)
T 2ycf_A 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLE 94 (322)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEE
T ss_pred eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEe
Confidence 46999999999999875 578999999865321 22346889999999999999999999987654 899999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC---eEEeecCccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME---PHISDFGLAR 520 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfGla~ 520 (686)
|+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||+++
T Consensus 95 ~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 95 LMEGGELFDKVVGN------KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp CCTTEETHHHHSTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred cCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 99999999998754 468999999999999999999999 89999999999999987654 9999999998
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
...... ......||..|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 166 ~~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 221 (322)
T 2ycf_A 166 ILGETS------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221 (322)
T ss_dssp ECCCCH------------------------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred eccccc------------------------ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 653211 111234677899999863 56789999999999999999999999965
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... .+.. .+....... .+.... .....+.+++.+||+.||++|||+.|++++
T Consensus 222 ~~~~~-~~~~---~~~~~~~~~----~~~~~~-----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 222 HRTQV-SLKD---QITSGKYNF----IPEVWA-----EVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp TTCSS-CHHH---HHHHTCCCC----CHHHHT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchHH-HHHH---HHHhCcccc----Cchhhh-----hcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 43322 1111 111221111 011101 122467899999999999999999999865
No 217
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.5e-38 Score=345.01 Aligned_cols=212 Identities=24% Similarity=0.334 Sum_probs=160.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC--CccchHHHHHHHHHHhccCCCCcceeeEEEEec-----CceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-----DEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lV~e~ 444 (686)
..||+|+||.||+|... +++.||||++... .....+++.+|++++++++||||+++++++... +..++||||
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~ 111 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI 111 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEEC
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEec
Confidence 46999999999999875 5788999999753 333456789999999999999999999999876 568999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
++ |+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+....
T Consensus 112 ~~-~~L~~~~~~~------~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 112 AD-SDLKKLFKTP------IFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp CS-EEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred CC-cCHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 96 6999999764 458999999999999999999999 8999999999999999999999999999987653
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccc-cCCCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS-KVRKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
.......... .....+..............+||..|+|||++ ....++.++|||||||++|||++|..||
T Consensus 182 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 182 EKDTNIVNDL-EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccc-cccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 3211000000 00000000000001223567889999999986 5567999999999999999999865554
No 218
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.5e-39 Score=363.67 Aligned_cols=251 Identities=21% Similarity=0.304 Sum_probs=198.5
Q ss_pred hcccCccCceEEEEEEeCC----CceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccC
Q 042348 372 AFLLGKSTIGIVYKVALNN----EEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIP 446 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~ 446 (686)
...||+|+||.||+|.... +..||||++.... ....+.+.+|+.++++++||||+++++++. .+..++||||++
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~ 473 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT 473 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCC
Confidence 4579999999999998743 4579999987643 333467999999999999999999999984 567899999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAE 526 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 526 (686)
+|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 474 ~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 474 LGELRSFLQVRK-----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TCBHHHHHHHTT-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 999999998653 358999999999999999999999 899999999999999999999999999998654221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCccccCccchhH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSMELNI 605 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~~~~ 605 (686)
. .......+|..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 546 ~----------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---- 599 (656)
T 2j0j_A 546 Y----------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---- 599 (656)
T ss_dssp ------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----
T ss_pred c----------------------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH----
Confidence 1 01122345678999999988899999999999999999997 99999543322
Q ss_pred HHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccc
Q 042348 606 VQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNI 670 (686)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 670 (686)
+....+...... . .. ......+.+++.+||+.||++|||+.||++.|+++..
T Consensus 600 -~~~~~i~~~~~~-~--~~---------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 600 -DVIGRIENGERL-P--MP---------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -HHHHHHHHTCCC-C--CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHcCCCC-C--CC---------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 222233222211 0 00 1122467899999999999999999999999998753
No 219
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=332.07 Aligned_cols=255 Identities=22% Similarity=0.307 Sum_probs=193.5
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
..||+|+||.||+|...+ .||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|
T Consensus 39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L 116 (319)
T 2y4i_B 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116 (319)
T ss_dssp CBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEH
T ss_pred eEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcH
Confidence 469999999999998864 49999986532 23346688999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCCcc
Q 042348 451 ATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEETPE 530 (686)
Q Consensus 451 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 530 (686)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++ ++.+||+|||+++.........
T Consensus 117 ~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~- 186 (319)
T 2y4i_B 117 YSVVRDAK-----IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR- 186 (319)
T ss_dssp HHHTTSSC-----CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccccccccc-
Confidence 99997653 468999999999999999999999 8999999999999998 6799999999987553221100
Q ss_pred ccccccccCCCCCCCccccccccCCCCCccccCcccccC---------CCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 531 VHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV---------RKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 531 ~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
.........||..|+|||.+.. ..++.++|||||||++|||++|+.||......
T Consensus 187 -----------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 249 (319)
T 2y4i_B 187 -----------------REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE 249 (319)
T ss_dssp ------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH
T ss_pred -----------------cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0011223457888999998864 45788999999999999999999999543321
Q ss_pred chhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccc
Q 042348 602 ELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNIST 672 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 672 (686)
...........+ ..... . ....+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 250 -----~~~~~~~~~~~~--~~~~~----~-----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 250 -----AIIWQMGTGMKP--NLSQI----G-----MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp -----HHHHHHHTTCCC--CCCCS----S-----CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred -----HHHHHhccCCCC--CCCcC----C-----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 122222222211 11110 0 1124778999999999999999999999999987544
No 220
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.9e-39 Score=332.59 Aligned_cols=256 Identities=21% Similarity=0.334 Sum_probs=186.7
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEE--------------ecCc
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFW--------------SVDE 437 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--------------~~~~ 437 (686)
..||+|+||.||+|.... ++.||||++........+++.+|++++++++||||+++++++. ..+.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS 96 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence 469999999999999864 8899999997766666778999999999999999999999874 3356
Q ss_pred eeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec-CCCCeEEeec
Q 042348 438 KLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG-KNMEPHISDF 516 (686)
Q Consensus 438 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~Df 516 (686)
.++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++ +++.+||+||
T Consensus 97 ~~lv~e~~~-~~L~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 97 VYIVQEYME-TDLANVLEQ-------GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp EEEEEECCS-EEHHHHHTT-------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeeccC-CCHHHHhhc-------CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEccC
Confidence 799999997 699999864 358999999999999999999999 8999999999999997 5679999999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
|+++......... .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||
T Consensus 166 g~~~~~~~~~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf 225 (320)
T 2i6l_A 166 GLARIMDPHYSHK--------------------GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225 (320)
T ss_dssp TTCBCC----------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccccccCCCcccc--------------------cccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCC
Confidence 9998654221100 01123345778999998765 67899999999999999999999999
Q ss_pred cccCccchhHHHHHHHHHhhcCCccc------------ccCcccccCCCc-----HHHHHHHHHHHHhccccCCCCCCCH
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMTD------------ILDPFLAHDLDK-----EDEIVSVLKIALDCVHKSPDKRPSM 658 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~d~~l~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~ 658 (686)
...... .....+......... ............ ......+.+++.+||+.||++|||+
T Consensus 226 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 300 (320)
T 2i6l_A 226 AGAHEL-----EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300 (320)
T ss_dssp CCSSHH-----HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCH
T ss_pred CCCCHH-----HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCH
Confidence 654321 112222221110000 000000000000 0123468899999999999999999
Q ss_pred HHHHHH
Q 042348 659 RHVCDS 664 (686)
Q Consensus 659 ~ev~~~ 664 (686)
.|++++
T Consensus 301 ~ell~h 306 (320)
T 2i6l_A 301 EEALSH 306 (320)
T ss_dssp HHHHTS
T ss_pred HHHhCC
Confidence 999875
No 221
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.3e-38 Score=341.26 Aligned_cols=261 Identities=20% Similarity=0.333 Sum_probs=188.2
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCc------eeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE------KLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~lV~e~~~ 446 (686)
..||+|+||.||+|+...+..||+|++.... ....+|++++++++||||+++++++...+. .++||||++
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~ 121 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCS
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccC
Confidence 4699999999999998877779999885432 223479999999999999999999976543 789999998
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec-CCCCeEEeecCcccccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG-KNMEPHISDFGLARLADIA 525 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~~~ 525 (686)
++.+....+.... ...+++..+..++.|++.||+|||+ ++|+||||||+|||++ .++.+||+|||+|+.....
T Consensus 122 ~~l~~~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 122 ETVYRASRHYAKL---KQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp EEHHHHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred ccHHHHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 7544333321110 1468999999999999999999999 8999999999999999 7999999999999865422
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.. .....+|..|+|||++.+. .++.++|||||||++|||++|+.||......+ .
T Consensus 196 ~~------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~ 250 (394)
T 4e7w_A 196 EP------------------------NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-Q 250 (394)
T ss_dssp CC------------------------CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred CC------------------------CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 11 1234568889999998764 58999999999999999999999996543221 1
Q ss_pred HHHHHHHHHhh---------cCCcccccCcccccCC----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hhccc
Q 042348 605 IVQWIQLILED---------RKPMTDILDPFLAHDL----DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS--LDRVN 669 (686)
Q Consensus 605 ~~~~~~~~~~~---------~~~~~~~~d~~l~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~i~ 669 (686)
+...+. .... .....+..-+...... .......++.+++.+||+.||++|||+.|++++ +++++
T Consensus 251 l~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 251 LVEIIK-VLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHHHH-HHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HHHHHH-HhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 111111 1100 0000000000000000 000123468899999999999999999999987 55543
No 222
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1e-38 Score=344.97 Aligned_cols=257 Identities=22% Similarity=0.334 Sum_probs=186.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecC------ceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD------EKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lV~e~~ 445 (686)
+.||+|+||.||+|... +++.||||++.... ..+.+|++++++++|||||+++++|.... ..++||||+
T Consensus 60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~ 135 (420)
T 1j1b_A 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135 (420)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECC
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcc
Confidence 46999999999999986 58999999986532 23457999999999999999999986532 257999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-CCeEEeecCccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-MEPHISDFGLARLADI 524 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~~~~ 524 (686)
++ +|.+.+..... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+++.+..
T Consensus 136 ~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 136 PE-TVYRVARHYSR--AKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cc-cHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 75 67666543110 01469999999999999999999999 899999999999999965 5689999999986542
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... .....+|..|+|||++.+. .++.++|||||||++|||++|+.||......+
T Consensus 210 ~~~------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~- 264 (420)
T 1j1b_A 210 GEP------------------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD- 264 (420)
T ss_dssp TCC------------------------CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred CCC------------------------ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 211 1234568889999998764 78999999999999999999999996543211
Q ss_pred hHHHHHHHH--------HhhcCCcccccCcccccCC----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLI--------LEDRKPMTDILDPFLAHDL----DKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~--------~~~~~~~~~~~d~~l~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+...+... ........+..-+.+.... .......++.+|+.+||+.||++|||+.|++++
T Consensus 265 ~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 265 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 122222110 0000001111011110000 000123468899999999999999999999876
No 223
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.8e-38 Score=333.06 Aligned_cols=257 Identities=23% Similarity=0.341 Sum_probs=193.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEec-----CceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-----DEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...++||||+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~ 112 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECC
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEccc
Confidence 46999999999999865 57889999997543 23346789999999999999999999999765 3679999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
+ |+|.+++... .+++.++..|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~-~~L~~~l~~~-------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 113 E-TDLYKLLKTQ-------HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp S-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred C-cCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 7 5999998653 48999999999999999999999 89999999999999999999999999999866432
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||......+
T Consensus 182 ~~~~--------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-- 239 (364)
T 3qyz_A 182 HDHT--------------------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-- 239 (364)
T ss_dssp GCBC--------------------CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG--
T ss_pred CCcc--------------------ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH--
Confidence 2100 11234567889999998654 558999999999999999999999996543322
Q ss_pred HHHHHHHHHhhcCCcccccCc-----------cc--ccCCCc----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDP-----------FL--AHDLDK----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~-----------~l--~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
....+...... +..+.... .. ...... ......+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 240 QLNHILGILGS--PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHHHCS--CCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHhCC--CCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 22222111111 00000000 00 000000 0112457899999999999999999999986
No 224
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.3e-38 Score=336.99 Aligned_cols=254 Identities=23% Similarity=0.314 Sum_probs=191.1
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCce------eEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEK------LLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~------~lV~e 443 (686)
..||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+.. ++|||
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 127 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 127 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEc
Confidence 46999999999999865 58899999997642 23356788999999999999999999999877654 99999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+. ++|.+++. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 128 ~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 128 FMQ-TDLQKIMG--------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCC-EEHHHHTT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred ccc-ccHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 997 68988874 348999999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.. .....+|..|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 196 ~~--------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~- 248 (371)
T 4exu_A 196 AE--------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL- 248 (371)
T ss_dssp ------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred cC--------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-
Confidence 21 123456788999999877 67899999999999999999999999543321
Q ss_pred hhHHHHHHHHHhhc-CCcccccCcc-----------cccCC--C----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDR-KPMTDILDPF-----------LAHDL--D----KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~-~~~~~~~d~~-----------l~~~~--~----~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+.+..+.... .+..+..+.. +.... . .......+.+++.+||+.||++|||+.|++++
T Consensus 249 ----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 249 ----DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp ----HHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ----HHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 1111221110 0000000000 00000 0 00123468899999999999999999999987
Q ss_pred --Hhccc
Q 042348 665 --LDRVN 669 (686)
Q Consensus 665 --L~~i~ 669 (686)
++.+.
T Consensus 325 p~f~~~~ 331 (371)
T 4exu_A 325 PFFEPFR 331 (371)
T ss_dssp GGGTTTC
T ss_pred cccccCC
Confidence 44443
No 225
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.2e-38 Score=346.01 Aligned_cols=253 Identities=24% Similarity=0.305 Sum_probs=185.8
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
.+||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+.+..++|||||. |+|.
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 469999999998777778999999998653 235678999999987 89999999999999999999999995 6999
Q ss_pred HHhhcCCCcccc-CCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC-------------CCeEEeecC
Q 042348 452 TAIHGKAGIISY-RPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN-------------MEPHISDFG 517 (686)
Q Consensus 452 ~~l~~~~~~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~-------------~~~kl~DfG 517 (686)
+++......... ...++..+..|+.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 999865421110 112445668899999999999999 899999999999999754 489999999
Q ss_pred cccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-------CCCCCcchHHHHHHHHHHHHh
Q 042348 518 LARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-------RKPTQKWDIYSYGVILLEMIS 590 (686)
Q Consensus 518 la~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwSlGvvl~ellt 590 (686)
+++......... ........||..|+|||++.+ ..++.++|||||||++|||+|
T Consensus 174 ~a~~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt 234 (434)
T 2rio_A 174 LCKKLDSGQSSF-------------------RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234 (434)
T ss_dssp TCEECCC---------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cceecCCCCccc-------------------eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHh
Confidence 998765322100 011224567889999999865 568999999999999999999
Q ss_pred -CCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 591 -GKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 591 -G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
|+.||....... ..+.......... ..........++.+++.+||+.||++|||+.||+++
T Consensus 235 ~g~~Pf~~~~~~~-------~~i~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 235 KGKHPFGDKYSRE-------SNIIRGIFSLDEM------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp TSCCTTCSTTTHH-------HHHHHTCCCCCCC------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCCchhhH-------HHHhcCCCCcccc------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 999995433221 1122222211111 111223455678899999999999999999999874
No 226
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.3e-38 Score=336.12 Aligned_cols=256 Identities=24% Similarity=0.290 Sum_probs=186.8
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCcc-----------chHHHHHHHHHHhccCCCCcceeeEEEEecC-----
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ-----------RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVD----- 436 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----- 436 (686)
..||+|+||.||+|...++..||||++...... ..+.+.+|++++++++||||+++++++...+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 107 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMH 107 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCC
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcc
Confidence 469999999999999888999999998543211 1367899999999999999999999996533
Q ss_pred ceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeec
Q 042348 437 EKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDF 516 (686)
Q Consensus 437 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 516 (686)
..++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Df 178 (362)
T 3pg1_A 108 KLYLVTELMR-TDLAQVIHDQR-----IVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDF 178 (362)
T ss_dssp EEEEEEECCS-EEHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCT
T ss_pred eEEEEEccCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEEEec
Confidence 4699999997 69999887654 468999999999999999999999 89999999999999999999999999
Q ss_pred CcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 517 GLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 517 Gla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
|+++...... ......+|..|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 179 g~~~~~~~~~------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 234 (362)
T 3pg1_A 179 NLAREDTADA------------------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234 (362)
T ss_dssp TC---------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred Cccccccccc------------------------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCC
Confidence 9997433211 1123456788999998876 67899999999999999999999999
Q ss_pred cccCccchhHHHHHHHHHhhcCCcc-----------cccCcccccCCC------cHHHHHHHHHHHHhccccCCCCCCCH
Q 042348 596 IQIGSMELNIVQWIQLILEDRKPMT-----------DILDPFLAHDLD------KEDEIVSVLKIALDCVHKSPDKRPSM 658 (686)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~d~~l~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPs~ 658 (686)
...... .....+...... .... +........... .......+.+++.+||+.||++|||+
T Consensus 235 ~~~~~~--~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 311 (362)
T 3pg1_A 235 RGSTFY--NQLNKIVEVVGT-PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST 311 (362)
T ss_dssp CCSSHH--HHHHHHHHHHCC-CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCHH--HHHHHHHHHcCC-CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCH
Confidence 553321 111111111100 0000 000000000000 00113457899999999999999999
Q ss_pred HHHHHH
Q 042348 659 RHVCDS 664 (686)
Q Consensus 659 ~ev~~~ 664 (686)
.|++++
T Consensus 312 ~ell~h 317 (362)
T 3pg1_A 312 EQALRH 317 (362)
T ss_dssp HHHHTS
T ss_pred HHHHcC
Confidence 999986
No 227
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.8e-38 Score=334.95 Aligned_cols=256 Identities=20% Similarity=0.246 Sum_probs=196.6
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccc-----------------hHHHHHHHHHHhccCCCCcceeeEEEEec
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQR-----------------FKEFQTEAEAIGKIRHPNIVSLRAYFWSV 435 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 435 (686)
..||+|+||.||+|.. +++.||||.+....... .+.+.+|++++++++||||+++++++.+.
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 115 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY 115 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence 4699999999999999 89999999986432111 17899999999999999999999999999
Q ss_pred CceeEEEeccCCCCHHHH------hhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC
Q 042348 436 DEKLLIYDYIPNGSLATA------IHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM 509 (686)
Q Consensus 436 ~~~~lV~e~~~~gsL~~~------l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~ 509 (686)
+..++||||+++|+|.++ +.... ...+++..+..++.|++.||+|||+. ++|+||||||+||+++.++
T Consensus 116 ~~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 116 DEVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNG 189 (348)
T ss_dssp SEEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCCCCGGGEEECTTS
T ss_pred CeEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecCCChHhEEEcCCC
Confidence 999999999999999999 54421 15699999999999999999999962 5899999999999999999
Q ss_pred CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCC-cchHHHHHHHHHH
Q 042348 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQ-KWDIYSYGVILLE 587 (686)
Q Consensus 510 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDVwSlGvvl~e 587 (686)
.+||+|||+++..... ......||..|+|||.+.+. .++. ++|||||||++||
T Consensus 190 ~~kl~dfg~~~~~~~~-------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~ 244 (348)
T 2pml_X 190 RVKLSDFGESEYMVDK-------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYV 244 (348)
T ss_dssp CEEECCCTTCEECBTT-------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHH
T ss_pred cEEEeccccccccccc-------------------------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHH
Confidence 9999999999765321 11234567889999999877 5666 9999999999999
Q ss_pred HHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccC------CCcHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 042348 588 MISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHD------LDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661 (686)
Q Consensus 588 lltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 661 (686)
|++|+.||...... ......+.......+.......... .........+.+++.+||+.||++|||+.|+
T Consensus 245 l~~g~~pf~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~ 320 (348)
T 2pml_X 245 MFYNVVPFSLKISL----VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA 320 (348)
T ss_dssp HHHSSCSSCCSSCS----HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred HHhCCCCCCCCCcH----HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence 99999999654331 1222222222221111000000000 0001123467899999999999999999999
Q ss_pred HHH
Q 042348 662 CDS 664 (686)
Q Consensus 662 ~~~ 664 (686)
+++
T Consensus 321 l~h 323 (348)
T 2pml_X 321 LKH 323 (348)
T ss_dssp HTS
T ss_pred hcC
Confidence 985
No 228
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4e-38 Score=325.21 Aligned_cols=258 Identities=22% Similarity=0.368 Sum_probs=187.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEe-------------cCce
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS-------------VDEK 438 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-------------~~~~ 438 (686)
..||+|+||.||+|... +++.||||.+... ....+.+.+|+.++++++||||+++++++.+ .+..
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (303)
T 1zy4_A 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL 90 (303)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEE
T ss_pred heeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCce
Confidence 46999999999999975 6889999998543 2345678999999999999999999999865 3457
Q ss_pred eEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCc
Q 042348 439 LLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGL 518 (686)
Q Consensus 439 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 518 (686)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 91 FIQMEYCENGTLYDLIHSEN-----LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEECCCSCBHHHHHHHSC-----GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred EEEEecCCCCCHHHhhhccc-----cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 99999999999999998643 357889999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 519 ARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 519 a~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
++............. .. .+..........||..|+|||.+.+. .++.++|||||||++|||++ ||..
T Consensus 163 ~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 163 AKNVHRSLDILKLDS----QN-----LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CSCTTC----------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred hhhcccccchhcccc----cc-----ccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 986543211000000 00 00000122345678889999998764 68999999999999999998 5522
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. .+...............+..+. ......+.+++.+||+.||++|||+.|++++
T Consensus 231 ~----~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 231 G----MERVNILKKLRSVSIEFPPDFD---------DNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp H----HHHHHHHHHHHSTTCCCCTTCC---------TTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred c----hhHHHHHHhccccccccCcccc---------ccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1 1112222332222221111111 1123457789999999999999999999986
No 229
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4e-38 Score=329.07 Aligned_cols=256 Identities=23% Similarity=0.270 Sum_probs=192.1
Q ss_pred cccCccCceEEEEEEe--CCCceEEEEEcCCCC--ccchHHHHHHHHHHhcc---CCCCcceeeEEEE-----ecCceeE
Q 042348 373 FLLGKSTIGIVYKVAL--NNEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKI---RHPNIVSLRAYFW-----SVDEKLL 440 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~-----~~~~~~l 440 (686)
..||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++++ +||||+++++++. .....++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 96 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEE
Confidence 4699999999999997 357899999886432 12234677888887776 8999999999997 4567899
Q ss_pred EEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 441 IYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 441 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
||||++ |+|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 97 v~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 97 VFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEECCS-CBHHHHHHHSCT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred EEecCC-CCHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 999997 699999986542 358999999999999999999999 899999999999999999999999999997
Q ss_pred ccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 521 LADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 169 ~~~~~~------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 224 (326)
T 1blx_A 169 IYSFQM------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224 (326)
T ss_dssp CCCGGG------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccCCC------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 553211 11234567889999999988999999999999999999999999964332
Q ss_pred cchhHHHHHHHHHhhcC--Ccccc-------cC----cccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRK--PMTDI-------LD----PFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~--~~~~~-------~d----~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
......+........ .+... +. ..+... .......+.+++.+||+.||++|||+.|++++
T Consensus 225 --~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 225 --VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF--VTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp --HHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGT--CCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --HHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhc--cccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 112211111111000 00000 00 000000 01123457799999999999999999999965
No 230
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.1e-38 Score=337.50 Aligned_cols=256 Identities=22% Similarity=0.307 Sum_probs=186.2
Q ss_pred cccCccCceEEEEEEe-CCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEec----------------
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV---------------- 435 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~---------------- 435 (686)
..||+|+||.||+|.. .+++.||||++.... ....+|++++++++|||||++++++...
T Consensus 13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
T 3eb0_A 13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNK 88 (383)
T ss_dssp EEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------------
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccc
Confidence 4699999999999986 468999999986532 2335799999999999999999998543
Q ss_pred ----------------------CceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCc
Q 042348 436 ----------------------DEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRY 493 (686)
Q Consensus 436 ----------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~i 493 (686)
...++||||++ |+|.+.+..... ....+++..+..++.|++.||+|||+ ++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~gi 162 (383)
T 3eb0_A 89 LGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR--SGRSIPMNLISIYIYQLFRAVGFIHS---LGI 162 (383)
T ss_dssp ---------------------CCEEEEEECCCS-EEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHT---TTE
T ss_pred ccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CcC
Confidence 23789999998 588877764211 01469999999999999999999999 899
Q ss_pred eecCCCCCCeeec-CCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-C
Q 042348 494 VHGDLRPSNILLG-KNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-K 571 (686)
Q Consensus 494 iHrDlkp~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~ 571 (686)
+||||||+|||++ .++.+||+|||+|+....... .....+|..|+|||.+.+. .
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~------------------------~~~~~~t~~y~aPE~~~~~~~ 218 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP------------------------SVAYICSRFYRAPELMLGATE 218 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC------------------------CCCCCCCSSCCCHHHHTTCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC------------------------CcCcccCCCccCHHHhcCCCC
Confidence 9999999999998 688999999999986543221 1234567789999998764 4
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhh---------cCCcccccCcccccCC----CcHHHHH
Q 042348 572 PTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILED---------RKPMTDILDPFLAHDL----DKEDEIV 638 (686)
Q Consensus 572 ~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~~l~~~~----~~~~~~~ 638 (686)
++.++||||+||++|||++|+.||......+ .+...+ ..... .....+..-+...... .......
T Consensus 219 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~-~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (383)
T 3eb0_A 219 YTPSIDLWSIGCVFGELILGKPLFSGETSID-QLVRII-QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPS 296 (383)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH-HHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCH
T ss_pred CCcchhhhhHHHHHHHHHhCCCCCCCCChHH-HHHHHH-HHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCH
Confidence 8999999999999999999999996543221 111111 11110 0000000000000000 0011234
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 639 SVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 639 ~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+.+++.+||+.||++|||+.|++++
T Consensus 297 ~~~~li~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 297 LAIDLLEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcC
Confidence 58899999999999999999999875
No 231
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.3e-38 Score=334.52 Aligned_cols=193 Identities=24% Similarity=0.323 Sum_probs=162.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC-CC-----CcceeeEEEEecCceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HP-----NIVSLRAYFWSVDEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~~~~~~~~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||||++.... ....++..|+++++.++ |+ +|+++++++...+..++||||+
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 46999999999999876 57889999997542 33467788999998885 55 4999999999999999999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec--CCCCeEEeecCcccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG--KNMEPHISDFGLARLAD 523 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~--~~~~~kl~DfGla~~~~ 523 (686)
+ |+|.+++..... ..+++..+..++.|++.||+|||+.. .+|+||||||+|||++ .++.+||+|||+++...
T Consensus 139 ~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~ 212 (382)
T 2vx3_A 139 S-YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212 (382)
T ss_dssp C-CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred C-CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence 6 599999986542 45899999999999999999999421 6899999999999994 57889999999997653
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCcccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQI 598 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~ 598 (686)
.. .....||..|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 213 ~~--------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 213 QR--------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CC--------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc--------------------------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11 12345678899999999999999999999999999999999999654
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=6.7e-38 Score=321.27 Aligned_cols=244 Identities=25% Similarity=0.373 Sum_probs=194.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 107 (287)
T 2wei_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107 (287)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCC
Confidence 46999999999999976 68899999986532 2345789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCC---CCeEEeecCccccccccc
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKN---MEPHISDFGLARLADIAE 526 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DfGla~~~~~~~ 526 (686)
|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.+ +.+||+|||+++......
T Consensus 108 L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 108 LFDEIIKR------KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 99988754 358999999999999999999999 899999999999999754 479999999997653221
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHH
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIV 606 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~ 606 (686)
. .....+|..|+|||.+.+ .++.++||||||+++|+|++|+.||..... .
T Consensus 179 ~------------------------~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~ 228 (287)
T 2wei_A 179 K------------------------MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----Y 228 (287)
T ss_dssp S------------------------CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----H
T ss_pred c------------------------cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-----H
Confidence 1 112345778999998875 489999999999999999999999955322 1
Q ss_pred HHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 607 QWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 607 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.....+........ .+.. ......+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~~---~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 229 DILKRVETGKYAFD---LPQW------RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHHHHHCCCCCC---SGGG------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHcCCCCCC---chhh------hhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 22333333322111 0000 0122357899999999999999999999985
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.7e-38 Score=334.22 Aligned_cols=264 Identities=20% Similarity=0.266 Sum_probs=181.3
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCcceeeEEEEecCc-------eeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE-------KLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-------~~lV~e~ 444 (686)
..||+|+||.||+|... +++.||||++.... .....+.+|++.++.++||||+++++++...+. .++||||
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~ 107 (360)
T 3e3p_A 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107 (360)
T ss_dssp ----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeec
Confidence 36999999999999975 58899999885542 223567788889999999999999999976544 7899999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHH--ccCCCCceecCCCCCCeeecC-CCCeEEeecCcccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH--EVSPKRYVHGDLRPSNILLGK-NMEPHISDFGLARL 521 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~ 521 (686)
+++ +|.+.+..... ....+++..+..++.|++.||+||| + ++|+||||||+|||++. ++.+||+|||+++.
T Consensus 108 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 108 VPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp CSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred ccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 976 55544432110 0146899999999999999999999 7 89999999999999996 89999999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVR-KPTQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
...... .....||..|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 182 ~~~~~~------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 237 (360)
T 3e3p_A 182 LSPSEP------------------------NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237 (360)
T ss_dssp CCTTSC------------------------CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cCCCCC------------------------cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh
Confidence 542211 1234568889999998664 489999999999999999999999965432
Q ss_pred cchhHHHHHHHHHhhc--------CCcccccCcccccCCC--------cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDR--------KPMTDILDPFLAHDLD--------KEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~--------~~~~~~~d~~l~~~~~--------~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.. ....+....... .+.....+........ .......+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 238 AG--QLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HH--HHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HH--HHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 21 111111111000 0000000000000000 01134578899999999999999999999987
Q ss_pred --Hhccc
Q 042348 665 --LDRVN 669 (686)
Q Consensus 665 --L~~i~ 669 (686)
++++.
T Consensus 316 p~f~~~~ 322 (360)
T 3e3p_A 316 PYFDELH 322 (360)
T ss_dssp GGGGGGG
T ss_pred ccccccC
Confidence 45543
No 234
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=8.2e-38 Score=330.62 Aligned_cols=255 Identities=20% Similarity=0.260 Sum_probs=194.1
Q ss_pred cccCccCceEEEEEEeC-CC-ceEEEEEcCCCCccchHHHHHHHHHHhccCCCC------cceeeEEEEecCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NE-EAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPN------IVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~~~lV~e~ 444 (686)
..||+|+||.||+|... ++ ..||||++.... ...+.+.+|++++++++|++ ++.+++++...+..++||||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 103 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFEL 103 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEEC
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEec
Confidence 46999999999999875 33 689999997542 33467889999999997765 99999999999999999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeee-------------------
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILL------------------- 505 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl------------------- 505 (686)
+ +++|.+++..... ..+++.++..++.||+.||+|||+ ++|+||||||+|||+
T Consensus 104 ~-~~~l~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 104 L-GKNTFEFLKENNF----QPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp C-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred c-CCChHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccccccc
Confidence 9 6677777765432 468999999999999999999999 899999999999999
Q ss_pred cCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHH
Q 042348 506 GKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVIL 585 (686)
Q Consensus 506 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl 585 (686)
+.++.+||+|||+++..... .....||..|+|||++.+..++.++|||||||++
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 229 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEH--------------------------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCIL 229 (355)
T ss_dssp ESCCCEEECCCTTCEETTSC--------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred cCCCcEEEeecCcccccccc--------------------------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHH
Confidence 56789999999999753211 1234578889999999999999999999999999
Q ss_pred HHHHhCCCCccccCccchhHHHHHHHHHhhcCC-------ccc---------------------ccCcccccCCCcHHHH
Q 042348 586 LEMISGKLPMIQIGSMELNIVQWIQLILEDRKP-------MTD---------------------ILDPFLAHDLDKEDEI 637 (686)
Q Consensus 586 ~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------------~~d~~l~~~~~~~~~~ 637 (686)
|||++|+.||...... .....+......... ... ...+............
T Consensus 230 ~el~~g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (355)
T 2eu9_A 230 FEYYRGFTLFQTHENR--EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 307 (355)
T ss_dssp HHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHH
T ss_pred HHHHhCCCCCCCCCHH--HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhH
Confidence 9999999999654322 222222222111000 000 0000000011122345
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 638 VSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 638 ~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..+.+++.+||+.||++|||+.|++++
T Consensus 308 ~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 308 VQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 678899999999999999999999875
No 235
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.9e-38 Score=329.58 Aligned_cols=245 Identities=21% Similarity=0.310 Sum_probs=189.0
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCC--CccchHHHHHHHHHHhccC--CCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNG--GWQRFKEFQTEAEAIGKIR--HPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||++...+++.||||.+... .....+.+.+|++++.+++ ||||+++++++...+..++||| +.++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 112 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 112 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCC
Confidence 369999999999999888999999998653 2334577899999999997 5999999999999999999999 5688
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++ +.+||+|||+++........
T Consensus 113 ~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 113 DLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp EHHHHHHHC------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 999999865 358999999999999999999999 89999999999999964 89999999999865432110
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccC-----------CCCCCcchHHHHHHHHHHHHhCCCCccc
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-----------RKPTQKWDIYSYGVILLEMISGKLPMIQ 597 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDVwSlGvvl~elltG~~P~~~ 597 (686)
.......||..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 183 ---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (313)
T 3cek_A 183 ---------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241 (313)
T ss_dssp ----------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ---------------------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence 01123457888999999865 4688899999999999999999999954
Q ss_pred cCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 598 IGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... ..+.......... . .... ....+.+++.+||+.||++||++.|++++
T Consensus 242 ~~~~~----~~~~~~~~~~~~~-~-----~~~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 242 IINQI----SKLHAIIDPNHEI-E-----FPDI-----PEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CCSHH----HHHHHHHCTTSCC-C-----CCCC-----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHH----HHHHHHHhccccc-C-----Cccc-----chHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 33221 1122222211110 0 0000 12357789999999999999999999876
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=329.77 Aligned_cols=255 Identities=21% Similarity=0.265 Sum_probs=190.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEecCc------eeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE------KLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~lV~e 443 (686)
..||+|+||.||+|... +++.||||++.... ....+++.+|+.++++++||||+++++++...+. .++|||
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 109 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 109 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEec
Confidence 46999999999999875 58899999986542 2334678899999999999999999999987654 499999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|++ |+|.+++. ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 110 ~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 110 FMQ-TDLQKIMG--------LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CCS-EEGGGTTT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred ccc-CCHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 997 68888774 348999999999999999999999 899999999999999999999999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSME 602 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~ 602 (686)
.. .....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||......
T Consensus 178 ~~--------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~- 230 (353)
T 3coi_A 178 AE--------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL- 230 (353)
T ss_dssp --------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-
T ss_pred CC--------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 11 123456788999999876 67899999999999999999999999653321
Q ss_pred hhHHHHHHHHHhhcC-----------------CcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH-
Q 042348 603 LNIVQWIQLILEDRK-----------------PMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS- 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~-----------------~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~- 664 (686)
+....+........ .......+.+... .......+.+++.+||+.||++|||+.|++++
T Consensus 231 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 231 -DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQL--FPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp -HHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTT--CTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred -HHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHh--cCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 11111111110000 0000000000000 01223468899999999999999999999976
Q ss_pred -Hhccc
Q 042348 665 -LDRVN 669 (686)
Q Consensus 665 -L~~i~ 669 (686)
++.+.
T Consensus 308 ~f~~~~ 313 (353)
T 3coi_A 308 FFEPFR 313 (353)
T ss_dssp GGTTTC
T ss_pred chhhcc
Confidence 44443
No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.1e-38 Score=331.24 Aligned_cols=245 Identities=19% Similarity=0.317 Sum_probs=167.4
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHH-HHHhccCCCCcceeeEEEEe----cCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEA-EAIGKIRHPNIVSLRAYFWS----VDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~H~nIv~l~~~~~~----~~~~~lV~e~~~ 446 (686)
.+||+|+||.||+|... +++.||||++... ....+|+ ..++.+.||||+++++++.. ....++||||++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 36999999999999976 5889999998653 2223333 34566799999999999986 445799999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC---CCCeEEeecCcccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK---NMEPHISDFGLARLAD 523 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~~~ 523 (686)
+|+|.+++..... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||+++...
T Consensus 110 gg~L~~~l~~~~~----~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 110 GGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp TEEHHHHHHTC-C----CCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred CCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 9999999987542 469999999999999999999999 89999999999999976 4559999999997543
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
... .....+|..|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 183 ~~~-------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 237 (336)
T 3fhr_A 183 QNA-------------------------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI 237 (336)
T ss_dssp ----------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred ccc-------------------------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh
Confidence 211 1233567789999999888899999999999999999999999954432211
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. ............... .+ ........+.+++.+||+.||++|||+.|++++
T Consensus 238 ~-~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 238 S-PGMKRRIRLGQYGFP---NP------EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp --------------CCC---TT------TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred h-hhHHHhhhccccccC---ch------hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 000111111110000 00 001123467899999999999999999999985
No 238
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.9e-38 Score=334.90 Aligned_cols=257 Identities=18% Similarity=0.235 Sum_probs=192.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC-----------CCCcceeeEEEEecC----
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-----------HPNIVSLRAYFWSVD---- 436 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~~~~~---- 436 (686)
..||+|+||.||+|... +++.||||.+.... ...+.+.+|++++++++ ||||+++++++...+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 46999999999999864 68899999997542 33467889999999886 899999999998654
Q ss_pred ceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC-CceecCCCCCCeeec------CCC
Q 042348 437 EKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK-RYVHGDLRPSNILLG------KNM 509 (686)
Q Consensus 437 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~iiHrDlkp~NILl~------~~~ 509 (686)
..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+ + +|+||||||+|||++ ..+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYEH----RGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred eEEEEEecC-CCCHHHHHHHhhc----cCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCcc
Confidence 679999999 8999999986542 458999999999999999999999 8 999999999999994 445
Q ss_pred CeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHH
Q 042348 510 EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMI 589 (686)
Q Consensus 510 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~ell 589 (686)
.+||+|||+++..... .....||..|+|||++.+..++.++|||||||++|||+
T Consensus 176 ~~kl~Dfg~a~~~~~~--------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 229 (373)
T 1q8y_A 176 QIKIADLGNACWYDEH--------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 229 (373)
T ss_dssp EEEECCCTTCEETTBC--------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHH
T ss_pred eEEEcccccccccCCC--------------------------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHH
Confidence 7999999999765321 12335688899999999989999999999999999999
Q ss_pred hCCCCccccCccch-hHHHHHHHHHhhcCCcccc-----------cCc-----------------ccc-cCCCcHHHHHH
Q 042348 590 SGKLPMIQIGSMEL-NIVQWIQLILEDRKPMTDI-----------LDP-----------------FLA-HDLDKEDEIVS 639 (686)
Q Consensus 590 tG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------~d~-----------------~l~-~~~~~~~~~~~ 639 (686)
||+.||........ .....+..+.......+.. ++. .+. ...........
T Consensus 230 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
T 1q8y_A 230 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 309 (373)
T ss_dssp HSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHH
T ss_pred hCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHH
Confidence 99999965432110 0011111111110000000 000 000 00112345678
Q ss_pred HHHHHHhccccCCCCCCCHHHHHHH
Q 042348 640 VLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 640 l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
+.+++.+||+.||++|||+.|++++
T Consensus 310 ~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 310 ISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred HHHHHHHHhccCccccCCHHHHhhC
Confidence 8999999999999999999999986
No 239
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=339.82 Aligned_cols=245 Identities=24% Similarity=0.349 Sum_probs=183.1
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
.+||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+.+..++|||||+ |+|.
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 47999999997666666789999999966432 3467899999999 79999999999999999999999996 6999
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC-----CCCeEEeecCccccccccc
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK-----NMEPHISDFGLARLADIAE 526 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DfGla~~~~~~~ 526 (686)
+++.... ..+.+..+..++.||+.||+|||+ ++|+||||||+|||++. ...+||+|||+|+......
T Consensus 106 ~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 106 EYVEQKD-----FAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp HHHHSSS-----CCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred HHHHhcC-----CCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 9998764 235556678999999999999999 89999999999999953 3368899999998664322
Q ss_pred CCccccccccccCCCCCCCccccccccCCCCCccccCccccc---CCCCCCcchHHHHHHHHHHHHh-CCCCccccCccc
Q 042348 527 ETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK---VRKPTQKWDIYSYGVILLEMIS-GKLPMIQIGSME 602 (686)
Q Consensus 527 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlGvvl~ellt-G~~P~~~~~~~~ 602 (686)
.. ........||..|+|||++. ...++.++|||||||++|||+| |..||.......
T Consensus 178 ~~--------------------~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~ 237 (432)
T 3p23_A 178 HS--------------------FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ 237 (432)
T ss_dssp ----------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH
T ss_pred cc--------------------eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH
Confidence 10 01123456888999999987 4567889999999999999999 999984322211
Q ss_pred hhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 603 LNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.. ........ .... ........+.+++.+||+.||++|||+.||+++
T Consensus 238 ------~~-~~~~~~~~-~~~~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 238 ------AN-ILLGACSL-DCLH-------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp ------HH-HHTTCCCC-TTSC-------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------HH-HHhccCCc-cccC-------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 11 11111111 1111 111234457789999999999999999999864
No 240
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.3e-37 Score=328.99 Aligned_cols=270 Identities=21% Similarity=0.279 Sum_probs=195.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEec-----CceeEEEecc
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSV-----DEKLLIYDYI 445 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lV~e~~ 445 (686)
..||+|+||.||+|... +++.||||++.... .....++.+|++++++++||||+++++++... ...++||||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 96 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM 96 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCC
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEecc
Confidence 46999999999999976 58899999996543 23346788999999999999999999998764 6789999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccc
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIA 525 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 525 (686)
. |+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~-~~L~~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 97 Q-TDLHRVIST-------QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp S-EEHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred C-ccHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 7 699999875 358999999999999999999999 89999999999999999999999999999876532
Q ss_pred cCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 526 EETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV-RKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 526 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
...... ..+ .........||..|+|||++.+ ..++.++|||||||++|||++|+.||...... .
T Consensus 166 ~~~~~~-----~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~ 230 (353)
T 2b9h_A 166 AADNSE-----PTG--------QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR--H 230 (353)
T ss_dssp ---------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--H
T ss_pred cccccC-----ccc--------cccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH--H
Confidence 211000 000 0011234567899999998754 67899999999999999999999999654321 1
Q ss_pred HHHHHHHHHhhcCCccccc----Ccc-------ccc-CCCc-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH--H
Q 042348 605 IVQWIQLILEDRKPMTDIL----DPF-------LAH-DLDK-----EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS--L 665 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~----d~~-------l~~-~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L 665 (686)
....+...... ....... .+. +.. .... ......+.+++.+||+.||++|||+.|++++ +
T Consensus 231 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 309 (353)
T 2b9h_A 231 QLLLIFGIIGT-PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309 (353)
T ss_dssp HHHHHHHHHCC-CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred HHHHHHHHhCC-CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence 11111111111 0000000 000 000 0000 0123467899999999999999999999986 4
Q ss_pred hccc
Q 042348 666 DRVN 669 (686)
Q Consensus 666 ~~i~ 669 (686)
+.+.
T Consensus 310 ~~~~ 313 (353)
T 2b9h_A 310 QTYH 313 (353)
T ss_dssp TTTC
T ss_pred cccC
Confidence 4443
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.6e-38 Score=326.49 Aligned_cols=234 Identities=19% Similarity=0.274 Sum_probs=189.7
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc------chHHHHHHHHHHhccC--CCCcceeeEEEEecCceeEEEe
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ------RFKEFQTEAEAIGKIR--HPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lV~e 443 (686)
..||+|+||.||+|... +++.||||.+...... ..+.+.+|+.++++++ ||||+++++++...+..++|||
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e 128 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 128 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEE
Confidence 46999999999999864 6889999998654221 2345778999999996 5999999999999999999999
Q ss_pred ccCC-CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec-CCCCeEEeecCcccc
Q 042348 444 YIPN-GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG-KNMEPHISDFGLARL 521 (686)
Q Consensus 444 ~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla~~ 521 (686)
|+.+ ++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++ +++.+||+|||+++.
T Consensus 129 ~~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 129 RPEPVQDLFDFITER------GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp CCSSEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred cCCCCccHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 9976 8999999764 358999999999999999999999 8999999999999999 788999999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCccccCc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQIGS 600 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~~~ 600 (686)
..... .....||..|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 200 ~~~~~-------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~- 253 (320)
T 3a99_A 200 LKDTV-------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE- 253 (320)
T ss_dssp CCSSC-------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-
T ss_pred ccccc-------------------------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-
Confidence 54211 123457888999999876665 688999999999999999999994321
Q ss_pred cchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 601 MELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
........... . ....+.+++.+||+.||++|||+.|++++
T Consensus 254 ----------~~~~~~~~~~~--------~-----~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 254 ----------EIIRGQVFFRQ--------R-----VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----------HHHHCCCCCSS--------C-----CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----------hhhcccccccc--------c-----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11112111111 1 12357789999999999999999999885
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.2e-38 Score=324.28 Aligned_cols=234 Identities=22% Similarity=0.328 Sum_probs=184.6
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc------cchHHHHHHHHHHhcc----CCCCcceeeEEEEecCceeEE
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW------QRFKEFQTEAEAIGKI----RHPNIVSLRAYFWSVDEKLLI 441 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~H~nIv~l~~~~~~~~~~~lV 441 (686)
..||+|+||.||+|... +++.||||++..... .....+.+|+.++.++ +||||+++++++...+..++|
T Consensus 37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v 116 (312)
T 2iwi_A 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV 116 (312)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEE
T ss_pred eEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEE
Confidence 46999999999999864 678999999965432 1234567899999998 899999999999999999999
Q ss_pred Eec-cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeec-CCCCeEEeecCcc
Q 042348 442 YDY-IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLG-KNMEPHISDFGLA 519 (686)
Q Consensus 442 ~e~-~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla 519 (686)
||| +.+++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++ .++.+||+|||++
T Consensus 117 ~e~~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 117 LERPLPAQDLFDYITEK------GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EECCSSEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999 7899999999764 358999999999999999999999 8999999999999999 8899999999999
Q ss_pred cccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCcccc
Q 042348 520 RLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKP-TQKWDIYSYGVILLEMISGKLPMIQI 598 (686)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlGvvl~elltG~~P~~~~ 598 (686)
+...... .....||..|+|||++.+..+ +.++|||||||++|||++|+.||...
T Consensus 188 ~~~~~~~-------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 242 (312)
T 2iwi_A 188 ALLHDEP-------------------------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD 242 (312)
T ss_dssp EECCSSC-------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred hhcccCc-------------------------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh
Confidence 8654211 123456788999999876665 45899999999999999999999431
Q ss_pred CccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 599 GSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
. ........... .....+.+++.+||+.||++|||+.|++++
T Consensus 243 ~-----------~~~~~~~~~~~-------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 243 Q-----------EILEAELHFPA-------------HVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp H-----------HHHHTCCCCCT-------------TSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred H-----------HHhhhccCCcc-------------cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 11112111111 112357789999999999999999999985
No 243
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.2e-37 Score=323.66 Aligned_cols=251 Identities=19% Similarity=0.279 Sum_probs=172.9
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCC-ccchHHHHHHHH-HHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGG-WQRFKEFQTEAE-AIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||||++.... .....++..|+. +++.++||||+++++++...+..++||||+++ +
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~ 106 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-S 106 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-E
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-C
Confidence 36999999999999975 68899999987642 233445666666 77778999999999999999999999999975 8
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC-CceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK-RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
|.+++...... ....+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 181 (327)
T 3aln_A 107 FDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA- 181 (327)
T ss_dssp HHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred hHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc-
Confidence 88877631100 01468999999999999999999999 7 999999999999999999999999999976532210
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccc----cCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS----KVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
.....||..|+|||++ .+..++.++|||||||++|||++|+.||........
T Consensus 182 -----------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~- 237 (327)
T 3aln_A 182 -----------------------KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD- 237 (327)
T ss_dssp -----------------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------
T ss_pred -----------------------cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-
Confidence 1123567889999998 456789999999999999999999999954322110
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
.+...... ..+.+... ........+.+++.+||+.||++|||+.|++++
T Consensus 238 ---~~~~~~~~-------~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 238 ---QLTQVVKG-------DPPQLSNS-EEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -----CCCCCS-------CCCCCCCC-SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---HHHHHhcC-------CCCCCCCc-ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00000000 00111100 001123468899999999999999999999875
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.5e-37 Score=319.23 Aligned_cols=245 Identities=19% Similarity=0.316 Sum_probs=175.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCcc-c-hHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCCC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQ-R-FKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
..||+|+||.||+|... +++.||||.+...... . .+.+..+..+++.++||||+++++++...+..++||||+ ++.
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 109 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTC 109 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEE
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCc
Confidence 36999999999999986 6889999998654322 2 233445556788889999999999999999999999999 556
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCC-CceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPK-RYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+..+..... ..+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++.......
T Consensus 110 ~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (318)
T 2dyl_A 110 AEKLKKRMQ-----GPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA- 180 (318)
T ss_dssp HHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred HHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc-
Confidence 666554332 468999999999999999999998 6 899999999999999999999999999975532211
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASK-----VRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
.....+|..|+|||.+. ...++.++|||||||++|||++|+.||......
T Consensus 181 -----------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 235 (318)
T 2dyl_A 181 -----------------------KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-- 235 (318)
T ss_dssp -----------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--
T ss_pred -----------------------ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--
Confidence 11235677899999984 456899999999999999999999999643222
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
............+... ... .....+.+++.+||+.||++||++.|++++
T Consensus 236 --~~~~~~~~~~~~~~~~-------~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 236 --FEVLTKVLQEEPPLLP-------GHM---GFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --HHHHHHHHHSCCCCCC-------SSS---CCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --HHHHHHHhccCCCCCC-------ccC---CCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1223333333221110 000 112357789999999999999999999875
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.2e-36 Score=309.38 Aligned_cols=228 Identities=13% Similarity=0.127 Sum_probs=177.1
Q ss_pred cccCccCceEEEEEEeCC-CceEEEEEcCCCCc---cchHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEeccCCC
Q 042348 373 FLLGKSTIGIVYKVALNN-EEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYDYIPNG 448 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e~~~~g 448 (686)
..||+|+||.||+|.... ++.||||.+..... ...+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 116 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGG 116 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEE
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCC
Confidence 369999999999999764 88999999976532 23467999999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccCC
Q 042348 449 SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEET 528 (686)
Q Consensus 449 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 528 (686)
+|.+++... ....++.+|+.|++.||+|||+ ++|+||||||+|||++.++.+||+++|
T Consensus 117 ~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 117 SLQEVADTS--------PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp EHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred CHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 999999532 3455788999999999999999 899999999999999999999998544
Q ss_pred ccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHH
Q 042348 529 PEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQW 608 (686)
Q Consensus 529 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~ 608 (686)
|++| ++.++|||||||++|||+||+.||...........
T Consensus 175 --------------------------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-- 213 (286)
T 3uqc_A 175 --------------------------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-- 213 (286)
T ss_dssp --------------------------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--
T ss_pred --------------------------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--
Confidence 4443 58899999999999999999999965433211000
Q ss_pred HHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcccccch
Q 042348 609 IQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVCDSLDRVNISTE 673 (686)
Q Consensus 609 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 673 (686)
............. ... ......+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 214 ~~~~~~~~~~~~~----~~~-----~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 214 AERDTAGQPIEPA----DID-----RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp CCBCTTSCBCCHH----HHC-----TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHhccCCCChh----hcc-----cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 0000000000000 000 1123457899999999999999 99999999999875443
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.3e-37 Score=342.16 Aligned_cols=255 Identities=24% Similarity=0.278 Sum_probs=191.0
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCC-CccchHHHHHHHHHHhccCCCCcceeeEEEEe------cCceeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNG-GWQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS------VDEKLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~~~lV~e~ 444 (686)
..||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++.. .+..++||||
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy 99 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEEC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEe
Confidence 46999999999999874 5889999998764 33445679999999999999999999999765 5677999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCC---eEEeecCcccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNME---PHISDFGLARL 521 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfGla~~ 521 (686)
+++|+|.+++...... ..+++..+..|+.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++.
T Consensus 100 ~~ggsL~~~L~~~~~~---~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 100 CEGGDLRKYLNQFENC---CGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CSSCBHHHHHHSSSCT---TCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred CCCCCHHHHHHhcccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 9999999999875421 358999999999999999999999 89999999999999997765 89999999986
Q ss_pred cccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCcc
Q 042348 522 ADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSM 601 (686)
Q Consensus 522 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~ 601 (686)
..... ......||..|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 174 ~~~~~------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~- 228 (676)
T 3qa8_A 174 LDQGE------------------------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ- 228 (676)
T ss_dssp TTSCC------------------------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-
T ss_pred ccccc------------------------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-
Confidence 54221 11234678889999999999999999999999999999999999954211
Q ss_pred chhHHHHHHHHHhhc---CCcccccC------cccc-cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 042348 602 ELNIVQWIQLILEDR---KPMTDILD------PFLA-HDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHV 661 (686)
Q Consensus 602 ~~~~~~~~~~~~~~~---~~~~~~~d------~~l~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 661 (686)
...|........ ....+... ..+. ...........+.+++.+||+.||++|||+.|+
T Consensus 229 ---~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 229 ---PVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ---HHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred ---hhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 111110000000 00000000 0000 000112345678899999999999999999873
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-36 Score=345.56 Aligned_cols=233 Identities=19% Similarity=0.251 Sum_probs=185.0
Q ss_pred cccCccCceEEEEEEeC--CCceEEEEEcCCCC-ccchHHHHHHHHHHhccCCCCcceeeEEEEecCc-----eeEEEec
Q 042348 373 FLLGKSTIGIVYKVALN--NEEAVAVRRLGNGG-WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDE-----KLLIYDY 444 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-----~~lV~e~ 444 (686)
..||+|+||.||+|... +++.||||++.... ......+.+|++++++++|||||++++++...+. .++||||
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~ 165 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEY 165 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEe
Confidence 46999999999999975 58899999986543 3345678999999999999999999999998766 6999999
Q ss_pred cCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccccc
Q 042348 445 IPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADI 524 (686)
Q Consensus 445 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 524 (686)
+++++|.+++.. .+++.+++.|+.||+.||+|||+ ++||||||||+|||++.+ .+||+|||+++....
T Consensus 166 ~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 166 VGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp CCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred CCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999987653 48999999999999999999999 899999999999999886 899999999975432
Q ss_pred ccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccchh
Q 042348 525 AEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMELN 604 (686)
Q Consensus 525 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~ 604 (686)
. ....||..|+|||++.+. ++.++|||||||++|||++|..||.......
T Consensus 234 ~---------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-- 283 (681)
T 2pzi_A 234 F---------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG-- 283 (681)
T ss_dssp C---------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS--
T ss_pred C---------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc--
Confidence 1 234578889999998765 4889999999999999999998884321110
Q ss_pred HHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhccccCCCCCCC-HHHHHHHHhccc
Q 042348 605 IVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPS-MRHVCDSLDRVN 669 (686)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ev~~~L~~i~ 669 (686)
.. ...........+.+++.+||+.||++||+ ++++.+.|..+.
T Consensus 284 --------------~~--------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 284 --------------LP--------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp --------------CC--------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred --------------cc--------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 00 00011122346789999999999999995 666666676553
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8.7e-36 Score=307.42 Aligned_cols=222 Identities=20% Similarity=0.338 Sum_probs=173.2
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHH-hccCCCCcceeeEEEEe----cCceeEEEeccC
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAI-GKIRHPNIVSLRAYFWS----VDEKLLIYDYIP 446 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~----~~~~~lV~e~~~ 446 (686)
.+||+|+||.||+|... +++.||+|++.. ...+.+|+.++ +..+||||+++++++.. .+..++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 46999999999999874 688999999854 25678899988 55599999999999987 667899999999
Q ss_pred CCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecC---CCCeEEeecCcccccc
Q 042348 447 NGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGK---NMEPHISDFGLARLAD 523 (686)
Q Consensus 447 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~~~ 523 (686)
+|+|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||+++...
T Consensus 99 ~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 99 GGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp SCBHHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred CCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 9999999987542 468999999999999999999999 89999999999999998 7899999999986322
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCccccCccch
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPMIQIGSMEL 603 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~ 603 (686)
+..++.++|||||||++|||+||+.||........
T Consensus 172 ---------------------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 206 (299)
T 3m2w_A 172 ---------------------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 206 (299)
T ss_dssp ---------------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------
T ss_pred ---------------------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh
Confidence 12357789999999999999999999954322110
Q ss_pred hHHHHHHHHHhhcCCcccccCcccccCCCc---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 042348 604 NIVQWIQLILEDRKPMTDILDPFLAHDLDK---EDEIVSVLKIALDCVHKSPDKRPSMRHVCDS 664 (686)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~---~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 664 (686)
..... ........ .... .....++.+++.+||+.||++|||+.|++++
T Consensus 207 ---------~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 207 ---------SPGMK--TRIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp ----------CCSC--CSSCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------hHHHH--HHHhhccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000 00000000 0000 1123468899999999999999999999985
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-36 Score=326.55 Aligned_cols=239 Identities=16% Similarity=0.135 Sum_probs=173.5
Q ss_pred cccCccCceEEEEEEeC-CCceEEEEEcCCCCc---cchHHHHHHHHHHhccCC-CCcce--------------------
Q 042348 373 FLLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW---QRFKEFQTEAEAIGKIRH-PNIVS-------------------- 427 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H-~nIv~-------------------- 427 (686)
++||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++| +|...
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 163 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC--
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCC
Confidence 47999999999999954 688999999874322 235789999999999987 32211
Q ss_pred -eeEEEEe-----cCceeEEEeccCCCCHHHHhhcCCC-ccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCC
Q 042348 428 -LRAYFWS-----VDEKLLIYDYIPNGSLATAIHGKAG-IISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRP 500 (686)
Q Consensus 428 -l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp 500 (686)
+..++.. ....+++|+++ +++|.+++..... ......+++..++.|+.|++.||+|||+ ++|+||||||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrDiKp 239 (413)
T 3dzo_A 164 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRP 239 (413)
T ss_dssp -------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred ccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCccc
Confidence 1111111 12356777766 6899999852100 0001458899999999999999999999 8999999999
Q ss_pred CCeeecCCCCeEEeecCcccccccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccc----------cCC
Q 042348 501 SNILLGKNMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEAS----------KVR 570 (686)
Q Consensus 501 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~ 570 (686)
+|||++.++.+||+|||+++..... .....| ..|+|||++ ...
T Consensus 240 ~NILl~~~~~~kL~DFG~a~~~~~~--------------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~ 292 (413)
T 3dzo_A 240 VDIVLDQRGGVFLTGFEHLVRDGAS--------------------------AVSPIG-RGFAPPETTAERMLPFGQHHPT 292 (413)
T ss_dssp GGEEECTTCCEEECCGGGCEETTEE--------------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCE
T ss_pred ceEEEecCCeEEEEeccceeecCCc--------------------------cccCCC-CceeCchhhhccccccccccCc
Confidence 9999999999999999998754321 122345 679999998 555
Q ss_pred CCCCcchHHHHHHHHHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccccCcccccCCCcHHHHHHHHHHHHhcccc
Q 042348 571 KPTQKWDIYSYGVILLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDILDPFLAHDLDKEDEIVSVLKIALDCVHK 650 (686)
Q Consensus 571 ~~~~~sDVwSlGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~ 650 (686)
.++.++|||||||++|||+||+.||......+. ...++. .... ....+.+++.+||+.
T Consensus 293 ~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~---------------~~~~~~----~~~~---~~~~~~~li~~~l~~ 350 (413)
T 3dzo_A 293 LMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG---------------SEWIFR----SCKN---IPQPVRALLEGFLRY 350 (413)
T ss_dssp EECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC---------------SGGGGS----SCCC---CCHHHHHHHHHHTCS
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh---------------HHHHHh----hccc---CCHHHHHHHHHHccC
Confidence 688999999999999999999999954322111 111111 0001 124588999999999
Q ss_pred CCCCCCCHHHHHHH
Q 042348 651 SPDKRPSMRHVCDS 664 (686)
Q Consensus 651 dP~~RPs~~ev~~~ 664 (686)
||++||++.|++++
T Consensus 351 dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 351 PKEDRLLPLQAMET 364 (413)
T ss_dssp SGGGSCCHHHHTTS
T ss_pred ChhhCcCHHHHHhC
Confidence 99999998888654
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.4e-35 Score=311.26 Aligned_cols=238 Identities=15% Similarity=0.165 Sum_probs=177.6
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCC--------ccchHHHHHHHHHHhccC---------CCCcceeeEEEE-
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGG--------WQRFKEFQTEAEAIGKIR---------HPNIVSLRAYFW- 433 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~nIv~l~~~~~- 433 (686)
...||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++ |||||++.+.+.
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 45799999999999998 67999999986542 223477899999999886 777777766643
Q ss_pred ----------------e-------------cCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHH
Q 042348 434 ----------------S-------------VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAF 484 (686)
Q Consensus 434 ----------------~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~ 484 (686)
+ .+..++|||||++|++.+.+.. ..+++.+++.|+.||+.||+|
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-------~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-------KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-------TCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-------cCCCHHHHHHHHHHHHHHHHH
Confidence 2 6788999999999977666643 348999999999999999999
Q ss_pred HH-ccCCCCceecCCCCCCeeecCCC--------------------CeEEeecCcccccccccCCccccccccccCCCCC
Q 042348 485 LH-EVSPKRYVHGDLRPSNILLGKNM--------------------EPHISDFGLARLADIAEETPEVHWEQSTTGTPLQ 543 (686)
Q Consensus 485 LH-~~~~~~iiHrDlkp~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~ 543 (686)
|| + ++|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 177 lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------------------ 235 (336)
T 2vuw_A 177 AEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------------------ 235 (336)
T ss_dssp HHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------------------
T ss_pred HHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------------------
Confidence 99 8 8999999999999999887 8999999999865421
Q ss_pred CCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHH-HHHHHhCCCCccccCccchhHHHHHHHHHhhcCCcccc
Q 042348 544 SSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVI-LLEMISGKLPMIQIGSMELNIVQWIQLILEDRKPMTDI 622 (686)
Q Consensus 544 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvv-l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (686)
...||..|+|||++.+.. +.++||||+|++ .+++++|..||.... ............. .....
T Consensus 236 ----------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~-~~~~~ 299 (336)
T 2vuw_A 236 ----------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL----WLHYLTDKMLKQM-TFKTK 299 (336)
T ss_dssp ----------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH----HHHHHHHHHHHTC-CCSSC
T ss_pred ----------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh----hhhHHHHhhhhhh-ccCcc
Confidence 125677899999998766 889999998777 788889999983210 0011111222111 11110
Q ss_pred cCcccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH-HH
Q 042348 623 LDPFLAHDLDKEDEIVSVLKIALDCVHKSPDKRPSMRHVC-DS 664 (686)
Q Consensus 623 ~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~-~~ 664 (686)
..+ ........++.+++.+||++| |++|++ ++
T Consensus 300 ~~~-----~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 300 CNT-----PAMKQIKRKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp CCS-----HHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred cch-----hhhhhcCHHHHHHHHHHhccC-----CHHHHHhcC
Confidence 000 012345667899999999976 999988 54
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.8e-33 Score=288.47 Aligned_cols=233 Identities=28% Similarity=0.531 Sum_probs=183.2
Q ss_pred CChhHHHHHHHHHHhccCCCCC-CCCCCCCCCCcc--eeeeEecC----CCEEEEEeCCCCccc--cCCcCcCCCCCCCE
Q 042348 15 SANDEGLALLSFKQAIRNFPEG-NNWNNSNEDPCS--WNGITCRE----GQVFSLIIPNKKLTG--FIPADLGSLSAIGR 85 (686)
Q Consensus 15 ~~~~~~~~l~~~k~~~~~~~~~-~~w~~~~~~~c~--w~gv~c~~----~~~~~l~l~~n~l~g--~~p~~l~~l~~L~~ 85 (686)
+..+|..||++||+++. +|.. .+|+. +.+||. |.||+|+. ++|+.|+|++|+++| .+|..|+.+++|++
T Consensus 3 c~~~~~~aL~~~k~~~~-~~~~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLG-NPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCGGGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCHHHHHHHHHHHHhcC-CcccccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 56789999999999995 4433 68875 468998 99999985 789999999999999 89999999999999
Q ss_pred EEccC-CCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccc
Q 042348 86 VNLRN-NNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNS 164 (686)
Q Consensus 86 L~L~~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (686)
|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|+.+++|++|+|++|.+++.+|..+..+++|++|+|++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 99999999999999999999999999998899999999999999999999988888888888888888888888
Q ss_pred cCCCCchhhhhcCc-ccceecccccccCCCCchhhhcc-----------------------cccccc-------------
Q 042348 165 FTGPLPDGFATNLT-ALQKLDLSFNNLSGLIPNDIANL-----------------------SRLRLL------------- 207 (686)
Q Consensus 165 l~~~~p~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----------------------~~L~~l------------- 207 (686)
+++.+|..+. .++ +|+.|+|++|++++.+|..+..+ ++|+.|
T Consensus 161 l~~~~p~~l~-~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 239 (313)
T 1ogq_A 161 ISGAIPDSYG-SFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239 (313)
T ss_dssp CEEECCGGGG-CCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG
T ss_pred ccCcCCHHHh-hhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc
Confidence 8877887764 455 66666666666665555444332 222111
Q ss_pred ----------------------------cccccccccCCCCCCCcccccccccCCcccccCCCCCCCCCCC
Q 042348 208 ----------------------------AQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGPPLK 250 (686)
Q Consensus 208 ----------------------------~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~~ 250 (686)
+++.+|++++|+++|.+|....+.++....+.+|+++||.|+.
T Consensus 240 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 1233455666666666665555666677778888888887664
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=7e-31 Score=292.75 Aligned_cols=185 Identities=11% Similarity=0.031 Sum_probs=129.5
Q ss_pred cCccCceEEEEEE-eCCCceEEEEEcCCCC----------ccchHHHHHHHHHHhcc-CCCCcceeeEEEEecCceeEEE
Q 042348 375 LGKSTIGIVYKVA-LNNEEAVAVRRLGNGG----------WQRFKEFQTEAEAIGKI-RHPNIVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 375 iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 442 (686)
.+.|+.|.++.++ .-.|+.++||.+.... ....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566777666654 3347889999986531 12345799999999999 7999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCccccc
Q 042348 443 DYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 443 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
||++||+|.++|.... +++.. +|+.||+.||+|+|+ +|||||||||+|||+++++.+||+|||+|+..
T Consensus 322 Eyv~G~~L~d~i~~~~------~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE------EIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp ECCCSEEHHHHHHTTC------CCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred ecCCCCcHHHHHHhCC------CCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999998653 45543 589999999999999 99999999999999999999999999999865
Q ss_pred ccccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 523 DIAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 523 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
.... ......+||++|+|||++.+ .+..++|+||+|++++++.++..|+
T Consensus 390 ~~~~-----------------------~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 390 PQDC-----------------------SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp C--------------------------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCC-----------------------ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 4321 11234568899999999875 4677899999999988887665544
No 253
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=3.7e-28 Score=281.38 Aligned_cols=217 Identities=18% Similarity=0.283 Sum_probs=185.4
Q ss_pred CChhHHHHHHHHHHhccCCCCCCCCCCCC----CCC--cce------------eeeEec-CCCEEEEEeCCCCccccCCc
Q 042348 15 SANDEGLALLSFKQAIRNFPEGNNWNNSN----EDP--CSW------------NGITCR-EGQVFSLIIPNKKLTGFIPA 75 (686)
Q Consensus 15 ~~~~~~~~l~~~k~~~~~~~~~~~w~~~~----~~~--c~w------------~gv~c~-~~~~~~l~l~~n~l~g~~p~ 75 (686)
...+|..||+.||+++. +| +|+.++ .+| |.| .||+|+ .++|+.|+|++|+|+|.+|+
T Consensus 266 ~~~~d~~ALl~~k~~l~-~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALD-GK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTT-GG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcC-CC---CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 34579999999999994 34 687664 467 999 999998 58999999999999999999
Q ss_pred CcCCCCCCCEEEc-cCCCCccc----------------------------------------------------------
Q 042348 76 DLGSLSAIGRVNL-RNNNFSGS---------------------------------------------------------- 96 (686)
Q Consensus 76 ~l~~l~~L~~L~L-~~N~l~g~---------------------------------------------------------- 96 (686)
.|++|++|+.|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 9999999999999 88866554
Q ss_pred ------------------CCccccCCCCCcEEEccCCCCCC-----------------CCccccc--CCCCCCEEeccCC
Q 042348 97 ------------------LPVELFNASNLQSLILSGNSFSG-----------------PVPMQIG--KLKYLQVLDLSQN 139 (686)
Q Consensus 97 ------------------~p~~~~~l~~L~~L~L~~N~l~g-----------------~~p~~~~--~l~~L~~L~ls~N 139 (686)
+|.+|+++++|++|+|++|+|+| .+|..++ ++++|++|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 88899999999999999999998 3999988 9999999999999
Q ss_pred CCCCCCChhhhhccccccccccccc-cCC-CCchhhhhcCc-------ccceecccccccCCCCch--hhhccccccccc
Q 042348 140 SFSSSIPSSIVQCKRLKTVVLNQNS-FTG-PLPDGFATNLT-------ALQKLDLSFNNLSGLIPN--DIANLSRLRLLA 208 (686)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~l~ 208 (686)
++.+.+|..+.++++|+.|+|++|+ ++| .+|..+. .++ +|+.|+|++|+++ .+|. .++++++|+.|
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~-~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L- 578 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWT-RLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLL- 578 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHH-HHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEE-
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHH-hhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEE-
Confidence 9999999999999999999999998 998 8898774 555 9999999999999 7787 88888887765
Q ss_pred ccccccccCCCCCCCcccccccccCCcccccCCCCC
Q 042348 209 QRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 209 ~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
+|++|+++ .+|....+.++..+.+.+|...
T Consensus 579 -----~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 579 -----DCVHNKVR-HLEAFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp -----ECTTSCCC-BCCCCCTTSEESEEECCSSCCS
T ss_pred -----ECCCCCcc-cchhhcCCCcceEEECcCCccc
Confidence 78888887 5664444555556666666544
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=9.9e-28 Score=279.01 Aligned_cols=192 Identities=37% Similarity=0.585 Sum_probs=157.3
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccc-----------
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQI----------- 125 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~----------- 125 (686)
..++.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+.++++|+.|+|++|+++|.+|..+
T Consensus 490 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~ 569 (768)
T 3rgz_A 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCST
T ss_pred CCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhc
Confidence 456777777777777777777777777777777777777777777777777777777777776666543
Q ss_pred -----------------------------------------------------------cCCCCCCEEeccCCCCCCCCC
Q 042348 126 -----------------------------------------------------------GKLKYLQVLDLSQNSFSSSIP 146 (686)
Q Consensus 126 -----------------------------------------------------------~~l~~L~~L~ls~N~l~~~~p 146 (686)
+.+++|+.|||++|+++|.+|
T Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip 649 (768)
T 3rgz_A 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649 (768)
T ss_dssp TCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCC
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCC
Confidence 234667888888888888888
Q ss_pred hhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCccc
Q 042348 147 SSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQ 226 (686)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~ 226 (686)
..++.+++|+.|+|++|+++|.+|..+. ++++|+.||||+|+++|.+|..++++++|+.| |+++|+|+|.+|+
T Consensus 650 ~~l~~l~~L~~L~Ls~N~l~g~ip~~l~-~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L------~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 650 KEIGSMPYLFILNLGHNDISGSIPDEVG-DLRGLNILDLSSNKLDGRIPQAMSALTMLTEI------DLSNNNLSGPIPE 722 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGG-GCTTCCEEECCSSCCEECCCGGGGGCCCCSEE------ECCSSEEEEECCS
T ss_pred HHHhccccCCEEeCcCCccCCCCChHHh-CCCCCCEEECCCCcccCcCChHHhCCCCCCEE------ECcCCcccccCCC
Confidence 8888888888888888888888888874 78888888888888888888888888777655 9999999999999
Q ss_pred ccccccCCcccccCCCCCCCCCCCCCCCCC
Q 042348 227 NAALLSLGPTAFIGNPFLCGPPLKVSCPSS 256 (686)
Q Consensus 227 ~~~~~~~~~~~~~~n~~~c~~p~~~~c~~~ 256 (686)
..++.++....|.|||.+||+|+. +|...
T Consensus 723 ~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 723 MGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp SSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred chhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 999999999999999999999986 78654
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=1.1e-27 Score=278.48 Aligned_cols=220 Identities=29% Similarity=0.399 Sum_probs=158.2
Q ss_pred hhcCCChhHHHHHHHHHHhccCCCCC-CCCCCCCCCCcceeeeEecCCCEEEEEeCCCCcccc---CC------------
Q 042348 11 ALMGSANDEGLALLSFKQAIRNFPEG-NNWNNSNEDPCSWNGITCREGQVFSLIIPNKKLTGF---IP------------ 74 (686)
Q Consensus 11 ~~~~~~~~~~~~l~~~k~~~~~~~~~-~~w~~~~~~~c~w~gv~c~~~~~~~l~l~~n~l~g~---~p------------ 74 (686)
++.++.++|+.||++||+++. +|.. .+|+. +.+||+|.||+|+.++|+.|+|+++.+.|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~-~~~~l~~W~~-~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP-DKNLLPDWSS-NKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS-CTTSSTTCCT-TSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred ccccCCHHHHHHHHHHHhhCC-CcccccCCCC-CCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 345567789999999999996 4534 78974 578999999999989999999999999987 44
Q ss_pred -----------cCcCCCCCCCEEEccCCCCcccCCc--cccCCCCCcEEEccCCCCCCCCcccc-cCCCCCCEEeccCCC
Q 042348 75 -----------ADLGSLSAIGRVNLRNNNFSGSLPV--ELFNASNLQSLILSGNSFSGPVPMQI-GKLKYLQVLDLSQNS 140 (686)
Q Consensus 75 -----------~~l~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~ls~N~ 140 (686)
..|+.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|.
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 5677778888888888888888887 78888888888888888887777765 678888888888888
Q ss_pred CCCCCChh---hhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccC
Q 042348 141 FSSSIPSS---IVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTY 217 (686)
Q Consensus 141 l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~ 217 (686)
+++..|.. +.++++|++|+|++|++++.+|. ..+++|++|+|++|++++.+|. ++++++|+.| ++++
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L------~Ls~ 232 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHL------DISG 232 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEE------ECCS
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEE------ECcC
Confidence 87777665 56666677777776666665543 3566667777777776666665 5555555443 6666
Q ss_pred CCCCCCcccccc-cccCCcccccCCC
Q 042348 218 NNLSGLIPQNAA-LLSLGPTAFIGNP 242 (686)
Q Consensus 218 N~l~~~~p~~~~-~~~~~~~~~~~n~ 242 (686)
|++++.+|..+. +.++..+.+.+|.
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~ 258 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQ 258 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSC
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCc
Confidence 666655554332 3334444444443
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.94 E-value=1e-27 Score=272.62 Aligned_cols=217 Identities=19% Similarity=0.361 Sum_probs=188.4
Q ss_pred hhHHHHHHHHHHhccCCCCC---------CCCCCCCCCCcce---eeeEecC-CCEEEEEeCCCCccccCCcCcCCCCCC
Q 042348 17 NDEGLALLSFKQAIRNFPEG---------NNWNNSNEDPCSW---NGITCRE-GQVFSLIIPNKKLTGFIPADLGSLSAI 83 (686)
Q Consensus 17 ~~~~~~l~~~k~~~~~~~~~---------~~w~~~~~~~c~w---~gv~c~~-~~~~~l~l~~n~l~g~~p~~l~~l~~L 83 (686)
..|..||..+++++..+.+. .+|+.+ .++|.| .||+|+. ++|+.|+|++|+|+|.+|+.|++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 35899999999998654433 368864 789999 9999964 699999999999999999999999999
Q ss_pred CEEEccCCC-----------------------------------------------------------------------
Q 042348 84 GRVNLRNNN----------------------------------------------------------------------- 92 (686)
Q Consensus 84 ~~L~L~~N~----------------------------------------------------------------------- 92 (686)
+.|+|++|.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 999999884
Q ss_pred -------CcccCCccccCCCCCcEEEccCCCCCCC-----------------Cccccc--CCCCCCEEeccCCCCCCCCC
Q 042348 93 -------FSGSLPVELFNASNLQSLILSGNSFSGP-----------------VPMQIG--KLKYLQVLDLSQNSFSSSIP 146 (686)
Q Consensus 93 -------l~g~~p~~~~~l~~L~~L~L~~N~l~g~-----------------~p~~~~--~l~~L~~L~ls~N~l~~~~p 146 (686)
|+| +|.+++++++|++|+|++|.|+|. +|..++ ++++|++|+|++|.+.+.+|
T Consensus 188 l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 188 IGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266 (636)
T ss_dssp TTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC
T ss_pred hccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh
Confidence 445 899999999999999999999986 999999 99999999999999999999
Q ss_pred hhhhhccccccccccccc-cCC-CCchhhhhcC------cccceecccccccCCCCch--hhhccccccccccccccccc
Q 042348 147 SSIVQCKRLKTVVLNQNS-FTG-PLPDGFATNL------TALQKLDLSFNNLSGLIPN--DIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~l~~~~~l~l~ 216 (686)
..+.++++|++|+|++|+ ++| .+|..+. .+ ++|++|+|++|+++ .+|. .++++++|+.| +++
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~-~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L------~L~ 338 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQ-ALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGML------ECL 338 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHH-HHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEE------ECC
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHH-hhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEE------eCc
Confidence 999999999999999999 998 8998885 55 99999999999999 7787 89988888765 888
Q ss_pred CCCCCCCcccccccccCCcccccCCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNPF 243 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~~ 243 (686)
+|+++|.+|....+.++..+.+.+|..
T Consensus 339 ~N~l~g~ip~~~~l~~L~~L~L~~N~l 365 (636)
T 4eco_A 339 YNQLEGKLPAFGSEIKLASLNLAYNQI 365 (636)
T ss_dssp SCCCEEECCCCEEEEEESEEECCSSEE
T ss_pred CCcCccchhhhCCCCCCCEEECCCCcc
Confidence 999888888444455566666666643
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=3.4e-27 Score=245.99 Aligned_cols=220 Identities=18% Similarity=0.231 Sum_probs=189.2
Q ss_pred CCChhHHHHHHHHHHhccCCCCC--CCCC---CCCCCCcceeeeEec----------CCCEEEEEeCCCCccccCCcCcC
Q 042348 14 GSANDEGLALLSFKQAIRNFPEG--NNWN---NSNEDPCSWNGITCR----------EGQVFSLIIPNKKLTGFIPADLG 78 (686)
Q Consensus 14 ~~~~~~~~~l~~~k~~~~~~~~~--~~w~---~~~~~~c~w~gv~c~----------~~~~~~l~l~~n~l~g~~p~~l~ 78 (686)
....+|..||+.||+.+..++.. ..|. ..+.++|.|.|+.|. ..+++.|+|++|+++ .+|..++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 34567899999999999777755 5674 345688999999995 378999999999999 7899999
Q ss_pred CCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhh-------
Q 042348 79 SLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQ------- 151 (686)
Q Consensus 79 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~------- 151 (686)
.+++|++|+|++|.|+ .+|..+.++++|++|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..+..
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 9999999999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred --ccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCccccc-
Q 042348 152 --CKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNA- 228 (686)
Q Consensus 152 --l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~- 228 (686)
+++|++|+|++|+++ .+|..+ ..+++|++|+|++|++++ +|..+..+++|+.| ++++|++.+.+|..+
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l-~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L------~Ls~n~~~~~~p~~~~ 250 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASI-ANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL------DLRGCTALRNYPPIFG 250 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGG-GGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE------ECTTCTTCCBCCCCTT
T ss_pred ccCCCCCEEECcCCCcC-cchHhh-cCCCCCCEEEccCCCCCc-CchhhccCCCCCEE------ECcCCcchhhhHHHhc
Confidence 999999999999999 788887 489999999999999997 45568887777655 999999998888754
Q ss_pred ccccCCcccccCCCCCC
Q 042348 229 ALLSLGPTAFIGNPFLC 245 (686)
Q Consensus 229 ~~~~~~~~~~~~n~~~c 245 (686)
.+.++..+.+.+|....
T Consensus 251 ~l~~L~~L~L~~n~~~~ 267 (328)
T 4fcg_A 251 GRAPLKRLILKDCSNLL 267 (328)
T ss_dssp CCCCCCEEECTTCTTCC
T ss_pred CCCCCCEEECCCCCchh
Confidence 35566667777776543
No 258
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.2e-26 Score=257.05 Aligned_cols=188 Identities=18% Similarity=0.239 Sum_probs=145.1
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCcc--------chHHHHHHHHHHhccCCCCcceeeEEEEecCceeEEEe
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ--------RFKEFQTEAEAIGKIRHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
.+.||+|+||.||++... +..+++|+....... ..+++.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 457999999999999544 677888876442211 13458999999999999999977777778888899999
Q ss_pred ccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 444 YIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 444 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
|+++|+|.+++.. +..|+.|++.||+|||+ ++|+||||||+|||++. .+||+|||+++...
T Consensus 420 ~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 420 YINGKLAKDVIED--------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp CCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred CCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 9999999999864 45799999999999999 89999999999999998 99999999998765
Q ss_pred cccCCccccccccccCCCCCCCccccccccCCCCCccccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 524 IAEETPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKV--RKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 524 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
........ .........||..|+|||++.. ..|+..+|+||..+-.++-+.++.+|
T Consensus 481 ~~~~~~~~----------------~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVD----------------LIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHH----------------HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred Cccccccc----------------hhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 32210000 0001124567889999999976 56788899999999999988888776
No 259
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.3e-24 Score=220.13 Aligned_cols=183 Identities=22% Similarity=0.270 Sum_probs=145.4
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEecc
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLS 137 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 137 (686)
.++.|+|++|++++..+..|..+++|++|+|++|.|+...+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 46778888888887766788888888888888888885555556788888888888888886666677888888888888
Q ss_pred CCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccC
Q 042348 138 QNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTY 217 (686)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~ 217 (686)
+|.+++..|..+..+++|++|+|++|++++ +|...+..+++|+.|+|++|++++..+..+.++++|+.| ++++
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L------~L~~ 190 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTL------KLDN 190 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE------ECCS
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCc-cCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEE------ECCC
Confidence 888887777778888888888888888884 555544578888889999888888777777777777655 8999
Q ss_pred CCCCCCccccc-ccccCCcccccCCCCCCCC
Q 042348 218 NNLSGLIPQNA-ALLSLGPTAFIGNPFLCGP 247 (686)
Q Consensus 218 N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~~ 247 (686)
|++++.++..+ .+.++..+.+.+||+.|.+
T Consensus 191 N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 191 NQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred CcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 99988766544 3566777888899988854
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.1e-23 Score=210.86 Aligned_cols=191 Identities=23% Similarity=0.293 Sum_probs=163.6
Q ss_pred CCcceeeeEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCccc
Q 042348 45 DPCSWNGITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQ 124 (686)
Q Consensus 45 ~~c~w~gv~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 124 (686)
+||.|.|++|.. ..+.++++++.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|..
T Consensus 3 ~Cp~~~gC~C~~-~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 78 (251)
T 3m19_A 3 TCETVTGCTCNE-GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78 (251)
T ss_dssp -CHHHHSSEEEG-GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cCCCCCceEcCC-CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhH
Confidence 467899999963 2357899999998 4777665 68999999999999888888999999999999999999888888
Q ss_pred ccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccc
Q 042348 125 IGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRL 204 (686)
Q Consensus 125 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 204 (686)
|..+++|++|+|++|++++..+..+..+++|++|+|++|++++ +|...+..+++|+.|+|++|+|++..+..+..+++|
T Consensus 79 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 157 (251)
T 3m19_A 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157 (251)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCC-cChhHhccCCcccEEECcCCcCCccCHHHcCcCcCC
Confidence 9999999999999999998777888999999999999999995 555554689999999999999998888788888887
Q ss_pred ccccccccccccCCCCCCCccccc-ccccCCcccccCCCCCCC
Q 042348 205 RLLAQRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFLCG 246 (686)
Q Consensus 205 ~~l~~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~ 246 (686)
+.| +|++|++++.++..+ .+.++..+.+.+|++.|.
T Consensus 158 ~~L------~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 158 QTL------SLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CEE------ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CEE------ECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 765 999999998887554 456777888999999874
No 261
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.89 E-value=7.4e-23 Score=207.95 Aligned_cols=190 Identities=24% Similarity=0.234 Sum_probs=158.4
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35899999999999988889999999999999999999877888999999999999999999888889999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCC-CCchhhhhcCcccceecccccccCCCCchhhhccccccccc-------
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG-PLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLA------- 208 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~------- 208 (686)
++|.+++..+..+..+++|++|+|++|++++ .+|..+ ..+++|++|+|++|++++..+..+..+.+|+.+.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF-SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG-GGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhh-ccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 9999998777789999999999999999986 357777 4899999999999999998888888877765321
Q ss_pred --------------ccccccccCCCCCCCccccc-ccccCCcccccCCCCCCCC
Q 042348 209 --------------QRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFLCGP 247 (686)
Q Consensus 209 --------------~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~~ 247 (686)
++..|++++|++++.++..+ .+.++..+.+.+|++.|.+
T Consensus 187 n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 187 NPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp SCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred CcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 34556677777776655443 3455566667777777654
No 262
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=8.6e-23 Score=208.66 Aligned_cols=181 Identities=27% Similarity=0.277 Sum_probs=160.4
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|.+++..|..|..+++|+.|+|++|.|++..+ . ..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 478899999999999999999999999999999999995433 3 78999999999999998 78989999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|++++..|..|..+++|++|+|++|++++ +|...+..+++|+.|+|++|+|++..+..+..+++|+.| +|+
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L------~L~ 180 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL------LLQ 180 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE------ECC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCc-cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE------ECC
Confidence 9999998778889999999999999999995 565555689999999999999998877777888887765 999
Q ss_pred CCCCCCCcccccccccCCcccccCCCCCCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNPFLCGP 247 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 247 (686)
+|+|+..++..+....+..+.+.+|||.|.+
T Consensus 181 ~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 181 ENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 9999977666666777788889999999864
No 263
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=2.1e-23 Score=211.88 Aligned_cols=128 Identities=16% Similarity=0.216 Sum_probs=106.6
Q ss_pred cccCccCceEEEEEEeCCCceEEEEEcCCCCc------------------cchHHHHHHHHHHhccCCCCcceeeEEEEe
Q 042348 373 FLLGKSTIGIVYKVALNNEEAVAVRRLGNGGW------------------QRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 434 (686)
..||+|+||.||+|...+++.||||.++.... .....+.+|++++++++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 57999999999999997789999999864321 12456899999999999 4 666665543
Q ss_pred cCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEe
Q 042348 435 VDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHIS 514 (686)
Q Consensus 435 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 514 (686)
+..++||||+++|+|.+ +.. .....++.|++.||+|||+ ++|+||||||+|||++ ++.+||+
T Consensus 173 -~~~~lvmE~~~g~~L~~-l~~------------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 173 -EGNAVLMELIDAKELYR-VRV------------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp -ETTEEEEECCCCEEGGG-CCC------------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEEC
T ss_pred -cceEEEEEecCCCcHHH-cch------------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEE
Confidence 56799999999999998 421 2345799999999999999 8999999999999999 9999999
Q ss_pred ecCcccc
Q 042348 515 DFGLARL 521 (686)
Q Consensus 515 DfGla~~ 521 (686)
|||+|+.
T Consensus 235 DFG~a~~ 241 (282)
T 1zar_A 235 DFPQSVE 241 (282)
T ss_dssp CCTTCEE
T ss_pred ECCCCeE
Confidence 9999973
No 264
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.4e-22 Score=201.06 Aligned_cols=172 Identities=22% Similarity=0.247 Sum_probs=152.2
Q ss_pred ceeeeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCC
Q 042348 48 SWNGITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNS 116 (686)
Q Consensus 48 ~w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~ 116 (686)
.|..|.|.. ..++.|+|++|++++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 356677752 468899999999999999999999999999999999998888889999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCch
Q 042348 117 FSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPN 196 (686)
Q Consensus 117 l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~ 196 (686)
+++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++ +|...+..+++|++|+|++|+|++.+|.
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc-cCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 998778889999999999999999997777778999999999999999995 5554346899999999999999999888
Q ss_pred hhhcccccccccccccccccCCCCCCCccc
Q 042348 197 DIANLSRLRLLAQRVYVDLTYNNLSGLIPQ 226 (686)
Q Consensus 197 ~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~ 226 (686)
.+..+++|+.| ++++|.+++....
T Consensus 174 ~~~~l~~L~~L------~l~~N~~~c~~~~ 197 (251)
T 3m19_A 174 AFDRLGKLQTI------TLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTCTTCCEE------ECCSCCBCTTSTT
T ss_pred HHhCCCCCCEE------EeeCCceeCCccc
Confidence 88888887755 9999999987443
No 265
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.87 E-value=2.6e-22 Score=204.88 Aligned_cols=188 Identities=21% Similarity=0.246 Sum_probs=112.8
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCC-CCCCCcccccCCCCCCEEec
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNS-FSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~l 136 (686)
.++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..|..+++|++|+|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 56667777777766655666666777777777776666666666666666677666665 55444666666666666666
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccc---------
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL--------- 207 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l--------- 207 (686)
++|.+++..|..+..+++|++|+|++|++++ +|...+..+++|+.|+|++|++++..+..+..+++|+.|
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccc-cCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 6666666556666666666666666666663 333322456666666666666665555555555554433
Q ss_pred ---------cccccccccCCCCCCCccccc-ccccCCcccccCCCCCCC
Q 042348 208 ---------AQRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFLCG 246 (686)
Q Consensus 208 ---------~~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~ 246 (686)
+++..|++++|++++.++..+ .+.++..+.+.+|++.|.
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 112234666666665544422 234455555666666654
No 266
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.86 E-value=4e-22 Score=210.12 Aligned_cols=179 Identities=21% Similarity=0.269 Sum_probs=149.7
Q ss_pred CCCcceeeeEec-------------CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEE
Q 042348 44 EDPCSWNGITCR-------------EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSL 110 (686)
Q Consensus 44 ~~~c~w~gv~c~-------------~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 110 (686)
..+|.|.|+ |+ ...++.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 467999988 65 1378999999999998777799999999999999999998888899999999999
Q ss_pred EccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCC-hhhhhccccccccccccc-cCCCCchhhhhcCcccceeccccc
Q 042348 111 ILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIP-SSIVQCKRLKTVVLNQNS-FTGPLPDGFATNLTALQKLDLSFN 188 (686)
Q Consensus 111 ~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~~l~~L~~L~Ls~N 188 (686)
+|++|++++..+..|+.+++|++|+|++|++++..+ ..+..+++|++|+|++|+ ++ .++...+..+++|++|+|++|
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc-ccCHHHccCCCCCCEEECCCC
Confidence 999999996666669999999999999999995433 478899999999999995 55 454443468999999999999
Q ss_pred ccCCCCchhhhcccccccc------------------cccccccccCCCCCCCc
Q 042348 189 NLSGLIPNDIANLSRLRLL------------------AQRVYVDLTYNNLSGLI 224 (686)
Q Consensus 189 ~l~~~~p~~~~~l~~L~~l------------------~~~~~l~l~~N~l~~~~ 224 (686)
++++..|..+.++++|+.| +.+..|++++|++++..
T Consensus 185 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 238 (353)
T 2z80_A 185 DLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFH 238 (353)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCC
T ss_pred CcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccc
Confidence 9999889888888777553 34566777777777643
No 267
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.8e-21 Score=188.77 Aligned_cols=170 Identities=25% Similarity=0.291 Sum_probs=142.4
Q ss_pred CcceeeeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccC
Q 042348 46 PCSWNGITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSG 114 (686)
Q Consensus 46 ~c~w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 114 (686)
.|+|.+|.|.. .+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 47899999973 3588999999999987777789999999999999999966666678999999999999
Q ss_pred CCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCC
Q 042348 115 NSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLI 194 (686)
Q Consensus 115 N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 194 (686)
|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++++ +|...+..+++|+.|+|++|.+.+..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccce-eCHHHhccCCCccEEEecCCCeecCC
Confidence 99997666678899999999999999997777778899999999999999995 55554468999999999999888653
Q ss_pred chhhhcccccccccccccccccCCCCCCCcccccc
Q 042348 195 PNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAA 229 (686)
Q Consensus 195 p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~ 229 (686)
| +|+ +|+++.|+++|.+|....
T Consensus 165 ~-------~l~------~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 165 P-------GIR------YLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp T-------TTH------HHHHHHHHCTTTBBCTTS
T ss_pred C-------CHH------HHHHHHHhCCceeeccCc
Confidence 3 343 448999999999987543
No 268
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.86 E-value=1.6e-21 Score=212.77 Aligned_cols=198 Identities=22% Similarity=0.232 Sum_probs=156.2
Q ss_pred eeeeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCC
Q 042348 49 WNGITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSF 117 (686)
Q Consensus 49 w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l 117 (686)
|..|.|.. ..++.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 56788863 3688999999999999999999999999999999999988889999999999999999999
Q ss_pred CCCCcccccCCCCCCEEeccCCCCCCCCChhh-------------------------hhccccccccccccccCCCCchh
Q 042348 118 SGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSI-------------------------VQCKRLKTVVLNQNSFTGPLPDG 172 (686)
Q Consensus 118 ~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-------------------------~~l~~L~~L~L~~N~l~~~~p~~ 172 (686)
++..+..|..+++|++|+|++|++++..+..+ ..+++|++|+|++|++++ +|.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~- 213 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPN- 213 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCC-
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-ccc-
Confidence 97777779999999999999999885544344 445556666666666663 342
Q ss_pred hhhcCcccceecccccccCCCCchhhhcccccccc------------------cccccccccCCCCCCCcccccc-cccC
Q 042348 173 FATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL------------------AQRVYVDLTYNNLSGLIPQNAA-LLSL 233 (686)
Q Consensus 173 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l------------------~~~~~l~l~~N~l~~~~p~~~~-~~~~ 233 (686)
+ ..+++|+.|+|++|+|++..|..+.++++|+.| +++..|||++|+|++.++..+. +.++
T Consensus 214 ~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 214 L-TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp C-TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred c-cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCC
Confidence 2 356777777788888887778777777766543 3456778999999887776543 5567
Q ss_pred CcccccCCCCCCCCCC
Q 042348 234 GPTAFIGNPFLCGPPL 249 (686)
Q Consensus 234 ~~~~~~~n~~~c~~p~ 249 (686)
..+.+.+|||.|.+.+
T Consensus 293 ~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 293 VELHLHHNPWNCDCDI 308 (452)
T ss_dssp CEEECCSSCEECSTTT
T ss_pred CEEEccCCCcCCCCCc
Confidence 7788899999998754
No 269
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=1.2e-21 Score=203.93 Aligned_cols=179 Identities=20% Similarity=0.257 Sum_probs=160.7
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccC---------
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGK--------- 127 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~--------- 127 (686)
.++++|+|++|.++ .+|..++.+++|++|+|++|+|+ .+|..+.++++|++|+|++|++.+.+|..++.
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 57899999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred CCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccc
Q 042348 128 LKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL 207 (686)
Q Consensus 128 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 207 (686)
+++|++|+|++|.++ .+|..+..+++|++|+|++|++++ +|..+ ..+++|+.|+|++|.+.+.+|..++++++|+.|
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l-~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAI-HHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGG-GGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhh-ccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 999999999999999 899999999999999999999995 77766 489999999999999999999999988888765
Q ss_pred cccccccccCCCCCCCccccc-ccccCCcccccCCCCCCC
Q 042348 208 AQRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFLCG 246 (686)
Q Consensus 208 ~~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~ 246 (686)
++++|++.+.+|... .+.++..+.+.+|+....
T Consensus 259 ------~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 292 (328)
T 4fcg_A 259 ------ILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292 (328)
T ss_dssp ------ECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC
T ss_pred ------ECCCCCchhhcchhhhcCCCCCEEeCCCCCchhh
Confidence 999999999988654 456677778888876643
No 270
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=5.9e-21 Score=187.99 Aligned_cols=162 Identities=25% Similarity=0.294 Sum_probs=134.2
Q ss_pred CCCCcceeeeEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCc
Q 042348 43 NEDPCSWNGITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVP 122 (686)
Q Consensus 43 ~~~~c~w~gv~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 122 (686)
+...|+|.+|.|.. ++++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+
T Consensus 15 ~~~~Cs~~~v~c~~----------~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~ 81 (229)
T 3e6j_A 15 SQCSCSGTTVDCRS----------KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPV 81 (229)
T ss_dssp TTCEEETTEEECTT----------SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCEEeCCEeEccC----------CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcCh
Confidence 35789999999964 3444 4565554 889999999999998888889999999999999999986556
Q ss_pred ccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccc
Q 042348 123 MQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLS 202 (686)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 202 (686)
..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+|+ .+|..+ ..+++|++|+|++|+|++..+..+..++
T Consensus 82 ~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 159 (229)
T 3e6j_A 82 GVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGI-ERLTHLTHLALDQNQLKSIPHGAFDRLS 159 (229)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTG-GGCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred hhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCccc-ccCCCCCEEECCCCcCCccCHHHHhCCC
Confidence 66789999999999999999777777888999999999999998 788877 4889999999999999988777787777
Q ss_pred ccccccccccccccCCCCCCCcc
Q 042348 203 RLRLLAQRVYVDLTYNNLSGLIP 225 (686)
Q Consensus 203 ~L~~l~~~~~l~l~~N~l~~~~p 225 (686)
+|+.| ++++|.+.+..+
T Consensus 160 ~L~~L------~l~~N~~~c~c~ 176 (229)
T 3e6j_A 160 SLTHA------YLFGNPWDCECR 176 (229)
T ss_dssp TCCEE------ECTTSCBCTTBG
T ss_pred CCCEE------EeeCCCccCCcc
Confidence 77655 888888887655
No 271
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.85 E-value=3.2e-21 Score=209.58 Aligned_cols=198 Identities=22% Similarity=0.236 Sum_probs=153.5
Q ss_pred eeeeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCC
Q 042348 49 WNGITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSF 117 (686)
Q Consensus 49 w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l 117 (686)
|..|.|.. ..++.|+|++|++++..+..|.++++|+.|+|++|.|++..|..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 66888873 3578899999999998889999999999999999999987788899999999999999999
Q ss_pred CCCCcccccCCCCCCEEeccCCCCCCCCChhh-------------------------hhccccccccccccccCCCCchh
Q 042348 118 SGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSI-------------------------VQCKRLKTVVLNQNSFTGPLPDG 172 (686)
Q Consensus 118 ~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-------------------------~~l~~L~~L~L~~N~l~~~~p~~ 172 (686)
++..+..|..+++|+.|+|++|.+++..+..+ .++++|++|+|++|+++ .+|.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~- 202 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN- 202 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-
Confidence 86666678889999999999988875544444 44555556666666665 3443
Q ss_pred hhhcCcccceecccccccCCCCchhhhcccccccc------------------cccccccccCCCCCCCccccc-ccccC
Q 042348 173 FATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL------------------AQRVYVDLTYNNLSGLIPQNA-ALLSL 233 (686)
Q Consensus 173 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l------------------~~~~~l~l~~N~l~~~~p~~~-~~~~~ 233 (686)
+ ..+++|+.|+|++|++++..|..+.++++|+.| +++..|||++|+|++.++..+ .+.++
T Consensus 203 ~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 203 L-TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp C-TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred c-CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 2 356777778888888887778788777776544 346678999999998777654 35667
Q ss_pred CcccccCCCCCCCCCC
Q 042348 234 GPTAFIGNPFLCGPPL 249 (686)
Q Consensus 234 ~~~~~~~n~~~c~~p~ 249 (686)
..+.+.+|||.|++.+
T Consensus 282 ~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 282 ERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CEEECCSSCEECSSTT
T ss_pred CEEEcCCCCccCCCCc
Confidence 7788999999997653
No 272
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.85 E-value=3.6e-21 Score=196.39 Aligned_cols=182 Identities=26% Similarity=0.283 Sum_probs=152.4
Q ss_pred EecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCC
Q 042348 53 TCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQ 132 (686)
Q Consensus 53 ~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 132 (686)
+|.....+.++.++++++. +|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|+
T Consensus 7 ~C~~~~~~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 83 (285)
T 1ozn_A 7 VCYNEPKVTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83 (285)
T ss_dssp EEECSSSCEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred eECCCCCeEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCC
Confidence 4665555778888999885 56544 47899999999999987778899999999999999999988899999999999
Q ss_pred EEeccCCC-CCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccc
Q 042348 133 VLDLSQNS-FSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRV 211 (686)
Q Consensus 133 ~L~ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~ 211 (686)
+|+|++|. ++...|..+..+++|++|+|++|++++..|..+ ..+++|++|+|++|++++..+..++.+++|+.|
T Consensus 84 ~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L---- 158 (285)
T 1ozn_A 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLF-RGLAALQYLYLQDNALQALPDDTFRDLGNLTHL---- 158 (285)
T ss_dssp EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT-TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE----
T ss_pred EEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHh-hCCcCCCEEECCCCcccccCHhHhccCCCccEE----
Confidence 99999998 887668899999999999999999997556555 589999999999999999888888888887765
Q ss_pred cccccCCCCCCCccccc-ccccCCcccccCCCCC
Q 042348 212 YVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFL 244 (686)
Q Consensus 212 ~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~ 244 (686)
++++|++++.++..+ .+.++..+.+.+|...
T Consensus 159 --~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 159 --FLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp --ECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred --ECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 899998887666533 3556666677777543
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.85 E-value=8.2e-21 Score=192.30 Aligned_cols=181 Identities=27% Similarity=0.345 Sum_probs=143.1
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|++++|.++. + +.+..+++|+.|+|++|.+++ + ..+.++++|++|+|++|.+++..+..|+.+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 567888888888874 2 357888888899999888885 3 47888888999999999888777777888888999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|++++..|..+..+++|++|+|++|++++ +|...+..+++|+.|+|++|++++.+|..+..+++|+.| +++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L------~L~ 189 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL------RLY 189 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE------ECC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCc-cCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE------ECC
Confidence 9888887777778888889999999888885 444444578888999999998888877777777777655 888
Q ss_pred CCCCCCCccccc-ccccCCcccccCCCCCCCCC
Q 042348 217 YNNLSGLIPQNA-ALLSLGPTAFIGNPFLCGPP 248 (686)
Q Consensus 217 ~N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~~p 248 (686)
+|++++.+|..+ .+.++..+.+.+|++.|.+|
T Consensus 190 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 190 QNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 888888777643 45667777888888877543
No 274
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.83 E-value=5.1e-21 Score=214.21 Aligned_cols=161 Identities=19% Similarity=0.262 Sum_probs=146.1
Q ss_pred CcceeeeEecC-------------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEc
Q 042348 46 PCSWNGITCRE-------------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLIL 112 (686)
Q Consensus 46 ~c~w~gv~c~~-------------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 112 (686)
+|.|.|+ |+. ..++.|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5899998 862 37999999999999999999999999999999999999888899999999999999
Q ss_pred cCCCCCCCCcccccCCCCCCEEeccCCCCCC-CCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccC
Q 042348 113 SGNSFSGPVPMQIGKLKYLQVLDLSQNSFSS-SIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLS 191 (686)
Q Consensus 113 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 191 (686)
++|++++..|..|+.+++|++|+|++|.+++ .+|..+..+++|++|+|++|++.+.+|...+.++++|++|+|++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999998888889999999999999999996 367889999999999999999766787655568999999999999999
Q ss_pred CCCchhhhcccccccc
Q 042348 192 GLIPNDIANLSRLRLL 207 (686)
Q Consensus 192 ~~~p~~~~~l~~L~~l 207 (686)
+.+|..++++++|+.|
T Consensus 162 ~~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHL 177 (549)
T ss_dssp EECTTTTTTCSEEEEE
T ss_pred ccChhhhhccccCceE
Confidence 9999999988887655
No 275
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=222.08 Aligned_cols=190 Identities=25% Similarity=0.306 Sum_probs=109.2
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEecc
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLS 137 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 137 (686)
.++.|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|.+++..+..|..+++|+.|+|+
T Consensus 291 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 370 (844)
T 3j0a_A 291 DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLR 370 (844)
T ss_dssp CCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEE
T ss_pred CCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECC
Confidence 45555666666665555556666666666666666655555566666666666666666655555556666666666666
Q ss_pred CCCCCCCC------------------C----------------------hhhhhccccccccccccccCCCCch------
Q 042348 138 QNSFSSSI------------------P----------------------SSIVQCKRLKTVVLNQNSFTGPLPD------ 171 (686)
Q Consensus 138 ~N~l~~~~------------------p----------------------~~~~~l~~L~~L~L~~N~l~~~~p~------ 171 (686)
+|.+++.. | ..+..+++|+.|+|++|++++..+.
T Consensus 371 ~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 450 (844)
T 3j0a_A 371 DNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSEN 450 (844)
T ss_dssp TCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSC
T ss_pred CCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccC
Confidence 66554310 0 0122344444455555544421111
Q ss_pred -----------------------hhhhcCcccceecccccccCCCCchhhhcccccccc----------------ccccc
Q 042348 172 -----------------------GFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL----------------AQRVY 212 (686)
Q Consensus 172 -----------------------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l----------------~~~~~ 212 (686)
..+.++++|+.|+|++|+|++.+|..+.++++|+.| +++..
T Consensus 451 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~ 530 (844)
T 3j0a_A 451 PSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEI 530 (844)
T ss_dssp TTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCE
T ss_pred CccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccE
Confidence 112355667777777777777777667666666544 12345
Q ss_pred ccccCCCCCCCcccccccccCCcccccCCCCCCCCCC
Q 042348 213 VDLTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGPPL 249 (686)
Q Consensus 213 l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~ 249 (686)
|||++|+|++.+|..+ .++..+.+.+||+.|.++.
T Consensus 531 L~Ls~N~l~~~~~~~~--~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 531 LDISRNQLLAPNPDVF--VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp EEEEEECCCCCCSCCC--SSCCEEEEEEECCCCSSSC
T ss_pred EECCCCcCCCCChhHh--CCcCEEEecCCCccccccc
Confidence 5666666666666543 3566678899999997654
No 276
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.83 E-value=1.6e-20 Score=212.92 Aligned_cols=197 Identities=21% Similarity=0.243 Sum_probs=171.2
Q ss_pred CCCccee----eeEec-----------CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCc
Q 042348 44 EDPCSWN----GITCR-----------EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQ 108 (686)
Q Consensus 44 ~~~c~w~----gv~c~-----------~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 108 (686)
.+||.|. .|.|. ...++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 3577663 57775 25789999999999999998999999999999999999988899999999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCC-CCchhhhhcCcccceecccc
Q 042348 109 SLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG-PLPDGFATNLTALQKLDLSF 187 (686)
Q Consensus 109 ~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~l~~L~~L~Ls~ 187 (686)
+|+|++|.+++..|..|+++++|++|+|++|.+++..|..+..+++|++|+|++|++++ .+|..+ .++++|++|+|++
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~-~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYF-SNLTNLVHVDLSY 162 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGG-GTCTTCCEEECCS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhH-hhcCCCCEEEccC
Confidence 99999999998889999999999999999999998777889999999999999999986 578877 4899999999999
Q ss_pred cccCCCCchhhhcccccccccccccccccCCCCCCCcccccccccCCcccccCCCC
Q 042348 188 NNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPF 243 (686)
Q Consensus 188 N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 243 (686)
|++++..|..++.+.+|+.+ +..+++++|++++..+..+...++....+.+|..
T Consensus 163 n~l~~~~~~~~~~l~~L~~~--l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~ 216 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQV--NLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFN 216 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTC--CCEEECTTCCCCEECTTTTTTCEEEEEEEESCCS
T ss_pred CcceecChhhhhhhhccccc--cceeeccCCCcceeCcccccCceeeeeeccCCcc
Confidence 99999999989888887631 3467999999998877766655666667777754
No 277
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=184.42 Aligned_cols=155 Identities=21% Similarity=0.221 Sum_probs=135.1
Q ss_pred EEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCC-ccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCC
Q 042348 61 SLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLP-VELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQN 139 (686)
Q Consensus 61 ~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (686)
.+++++|.|+. +|..+. ..++.|+|++|+|++..| ..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 57778888885 677664 456899999999997755 45789999999999999999877789999999999999999
Q ss_pred CCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCC
Q 042348 140 SFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNN 219 (686)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~ 219 (686)
.+++..|..+..+++|++|+|++|++++..|..+ ..+++|+.|+|++|+|++.+|..+..+++|+.| ++++|.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------~L~~N~ 164 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSF-IGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTL------NLLANP 164 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSS-TTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEE------ECCSCC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHc-CCCccCCEEECCCCcCCEECHHHhcCCCCCCEE------EecCcC
Confidence 9998888889999999999999999997667666 589999999999999999999999988887765 999999
Q ss_pred CCCCcc
Q 042348 220 LSGLIP 225 (686)
Q Consensus 220 l~~~~p 225 (686)
+++..+
T Consensus 165 l~c~c~ 170 (220)
T 2v70_A 165 FNCNCY 170 (220)
T ss_dssp EECSGG
T ss_pred CcCCCc
Confidence 987655
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.83 E-value=4.6e-21 Score=197.77 Aligned_cols=183 Identities=21% Similarity=0.262 Sum_probs=127.3
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCC-ccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLP-VELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
..++.|+|++|.+++ +|..+..+++|++|+|++|++++..+ ..+.++++|++|+|++|.+++..|..+..+++|++|+
T Consensus 78 ~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 456667777777764 55567777777777777777775444 4667777777777777777777777777777777777
Q ss_pred ccCCCCCC-CCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccc
Q 042348 136 LSQNSFSS-SIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVD 214 (686)
Q Consensus 136 ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~ 214 (686)
|++|.+++ .+|..+..+++|++|+|++|++++..|..+ ..+++|+.|+|++|++++..+..+..+++|+.| |
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------~ 229 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF-NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL------D 229 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT-TTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE------E
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHh-cCCCCCCEEECCCCccCccChhhccCcccCCEe------E
Confidence 77777765 466777777777777777777775545544 467777777777777777666666666665544 7
Q ss_pred ccCCCCCCCcccccc-c-ccCCcccccCCCCCCCC
Q 042348 215 LTYNNLSGLIPQNAA-L-LSLGPTAFIGNPFLCGP 247 (686)
Q Consensus 215 l~~N~l~~~~p~~~~-~-~~~~~~~~~~n~~~c~~ 247 (686)
+++|++++.+|.... + .++..+.+.+|++.|.+
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 888888877765543 2 25566677777777643
No 279
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.82 E-value=2.4e-20 Score=212.43 Aligned_cols=183 Identities=25% Similarity=0.275 Sum_probs=156.7
Q ss_pred CCccee----eeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcE
Q 042348 45 DPCSWN----GITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQS 109 (686)
Q Consensus 45 ~~c~w~----gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 109 (686)
+||.+. .|.|.. ..++.|+|++|+|++..|.+|.++++|++|+|++|+|++..|.+|.++++|++
T Consensus 25 ~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~ 104 (635)
T 4g8a_A 25 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 104 (635)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCE
Confidence 467543 467862 46899999999999988889999999999999999999888888999999999
Q ss_pred EEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCC-CchhhhhcCcccceeccccc
Q 042348 110 LILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGP-LPDGFATNLTALQKLDLSFN 188 (686)
Q Consensus 110 L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~~l~~L~~L~Ls~N 188 (686)
|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++. +|..+ ..+++|++|+|++|
T Consensus 105 L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~-~~l~~L~~L~L~~N 183 (635)
T 4g8a_A 105 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF-SNLTNLEHLDLSSN 183 (635)
T ss_dssp EECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG-GGCTTCCEEECCSS
T ss_pred EEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhh-ccchhhhhhcccCc
Confidence 99999999977778899999999999999999987777899999999999999999864 45555 58999999999999
Q ss_pred ccCCCCchhhhcccccccccccccccccCCCCCCCccccccc
Q 042348 189 NLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAAL 230 (686)
Q Consensus 189 ~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~ 230 (686)
+|++..|..+..+.++..+ ...++++.|.++...+.....
T Consensus 184 ~l~~~~~~~l~~L~~l~~~--~~~~~ls~n~l~~i~~~~~~~ 223 (635)
T 4g8a_A 184 KIQSIYCTDLRVLHQMPLL--NLSLDLSLNPMNFIQPGAFKE 223 (635)
T ss_dssp CCCEECGGGGHHHHTCTTC--CCEEECTTCCCCEECTTTTTT
T ss_pred cccccccccccchhhhhhh--hhhhhcccCcccccCcccccc
Confidence 9999999998888776543 235689999998776655443
No 280
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.82 E-value=5.6e-20 Score=186.13 Aligned_cols=162 Identities=23% Similarity=0.240 Sum_probs=144.7
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
...++.|+|++|.+++. +.+..+++|++|+|++|.+++..|..+.++++|++|+|++|++++..+..|+.+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 36899999999999973 5899999999999999999987788889999999999999999988888899999999999
Q ss_pred ccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccc
Q 042348 136 LSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDL 215 (686)
Q Consensus 136 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l 215 (686)
|++|++++..|..+..+++|+.|+|++|++++. |...+..+++|++|+|++|++++.+|..+..+++|+.| ++
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------~l 212 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL-PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYI------WL 212 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC-CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE------EC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCcc-CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEE------Ec
Confidence 999999987777889999999999999999964 44444689999999999999999988888888887765 89
Q ss_pred cCCCCCCCccc
Q 042348 216 TYNNLSGLIPQ 226 (686)
Q Consensus 216 ~~N~l~~~~p~ 226 (686)
++|.+.+..|.
T Consensus 213 ~~N~~~~~~~~ 223 (272)
T 3rfs_A 213 HDNPWDCTCPG 223 (272)
T ss_dssp CSSCBCCCTTT
T ss_pred cCCCccccCcH
Confidence 99999888774
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.82 E-value=1.5e-20 Score=205.30 Aligned_cols=158 Identities=21% Similarity=0.287 Sum_probs=140.9
Q ss_pred CCCcceee--eEecC----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccC-CccccCCCCCcEE
Q 042348 44 EDPCSWNG--ITCRE----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSL-PVELFNASNLQSL 110 (686)
Q Consensus 44 ~~~c~w~g--v~c~~----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L 110 (686)
...|.|.+ |.|.. .++++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|
T Consensus 5 ~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 5 TSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp --CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred cceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 34577766 88873 45899999999999999999999999999999999998666 5678999999999
Q ss_pred EccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChh--hhhccccccccccccccCCCCchhhhhcCcccceeccccc
Q 042348 111 ILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSS--IVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFN 188 (686)
Q Consensus 111 ~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N 188 (686)
+|++|++++..|..|+++++|++|+|++|.+++.+|.. +..+++|++|+|++|++++..|..++.++++|++|+|++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999999888999999999999999999999866655 8999999999999999998778875678999999999999
Q ss_pred ccCCCCchhhhcc
Q 042348 189 NLSGLIPNDIANL 201 (686)
Q Consensus 189 ~l~~~~p~~~~~l 201 (686)
++++..|..+..+
T Consensus 165 ~l~~~~~~~l~~l 177 (455)
T 3v47_A 165 KVKSICEEDLLNF 177 (455)
T ss_dssp CBSCCCTTTSGGG
T ss_pred cccccChhhhhcc
Confidence 9999999888776
No 282
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.82 E-value=1.1e-20 Score=214.18 Aligned_cols=185 Identities=18% Similarity=0.150 Sum_probs=151.8
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCC-ccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLP-VELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
..++.|+|++|.+++ +|..+..+++|+.|+|++|++.+..| ..+.++++|++|+|++|.+++.+|..++.+++|++|+
T Consensus 376 ~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 454 (606)
T 3vq2_A 376 NSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLK 454 (606)
T ss_dssp SCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred CcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEE
Confidence 466777777777775 56788888888888888888887777 6788889999999999999888888888999999999
Q ss_pred ccCCCCCC-CCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccc
Q 042348 136 LSQNSFSS-SIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVD 214 (686)
Q Consensus 136 ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~ 214 (686)
|++|.+++ .+|..+..+++|+.|+|++|++++..|..+ ..+++|+.|+|++|++++.+|..+.++++|+.| |
T Consensus 455 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L------~ 527 (606)
T 3vq2_A 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF-DTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL------D 527 (606)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT-TTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE------E
T ss_pred CCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhh-cccccCCEEECCCCcCCCcCHHHccCCCcCCEE------E
Confidence 99999887 378888889999999999999987666666 578999999999999999888888888887765 9
Q ss_pred ccCCCCCCCcccccccc-cCCcccccCCCCCCCCCC
Q 042348 215 LTYNNLSGLIPQNAALL-SLGPTAFIGNPFLCGPPL 249 (686)
Q Consensus 215 l~~N~l~~~~p~~~~~~-~~~~~~~~~n~~~c~~p~ 249 (686)
+++|+++..++....+. ++..+.+.+||+.|+++.
T Consensus 528 l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 528 CSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CCCCcCcccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999996544433444 377788999999997664
No 283
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.82 E-value=2.2e-20 Score=203.91 Aligned_cols=120 Identities=26% Similarity=0.286 Sum_probs=68.1
Q ss_pred cccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcc
Q 042348 122 PMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANL 201 (686)
Q Consensus 122 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 201 (686)
|..++.+++|+.|+|++|.+++..|..+..+++|++|+|++|++++..|..+ ..+++|+.|+|++|++++.+|..+.++
T Consensus 292 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 292 KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMF-ENLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGG-TTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred hhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHh-cCcccCCEEECCCCcccccChhhcccc
Confidence 3444455555555555555555555555555555555555555554333333 355555666666665555555555555
Q ss_pred cccccccccccccccCCCCCCCccccc-ccccCCcccccCCCCCCCCC
Q 042348 202 SRLRLLAQRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFLCGPP 248 (686)
Q Consensus 202 ~~L~~l~~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~~p 248 (686)
++|+. |++++|++++.++..+ .+.++..+.+.+|++.|.+|
T Consensus 371 ~~L~~------L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 371 PNLKE------LALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCE------EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccE------EECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 55443 3777777777655543 35556666777777777544
No 284
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=4.3e-20 Score=180.53 Aligned_cols=151 Identities=25% Similarity=0.250 Sum_probs=122.8
Q ss_pred EEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCC
Q 042348 62 LIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSF 141 (686)
Q Consensus 62 l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 141 (686)
+++++++|+ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|++
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 334466666 3666654 6889999999999977777889999999999999999988888999999999999999999
Q ss_pred CCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCC
Q 042348 142 SSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLS 221 (686)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~ 221 (686)
++..+..|..+++|+.|+|++|++++..|..+ ..+++|+.|+|++|+|++..+..+..+++|+.| ++++|.+.
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------~L~~N~~~ 165 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAF-QDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTM------HLAQNPFI 165 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE------ECCSSCEE
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHc-CCCCCCCEEECCCCcCCEECHHHHhCCCCCCEE------EeCCCCcC
Confidence 96666667889999999999999987656555 588999999999999998888778877776654 67766665
Q ss_pred C
Q 042348 222 G 222 (686)
Q Consensus 222 ~ 222 (686)
.
T Consensus 166 c 166 (220)
T 2v9t_B 166 C 166 (220)
T ss_dssp C
T ss_pred C
Confidence 3
No 285
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.82 E-value=1.6e-20 Score=193.79 Aligned_cols=189 Identities=22% Similarity=0.301 Sum_probs=133.6
Q ss_pred cceeeeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcc--cCCccccCCCCCcEEEcc
Q 042348 47 CSWNGITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSG--SLPVELFNASNLQSLILS 113 (686)
Q Consensus 47 c~w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~L~ 113 (686)
|.|.+|.|.. ..++.|+|++|+++...+..|..+++|+.|+|++|.++. ..|..+..+++|++|+|+
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 7899999973 368899999999996555568999999999999999973 336667778888888888
Q ss_pred CCCCCCCCcccccCCCCCCEEeccCCCCCCCCC-hhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCC
Q 042348 114 GNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIP-SSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSG 192 (686)
Q Consensus 114 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 192 (686)
+|.++ .+|..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..+ ..+++|++|+|++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF-NGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTT-TTCTTCCEEECTTCEEGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhc-ccCcCCCEEECCCCcccc
Confidence 88877 566667777778888887777775444 466777777777777777775555444 467777777777777765
Q ss_pred -CCchhhhcccccccccccccccccCCCCCCCccccc-ccccCCcccccCCCC
Q 042348 193 -LIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPF 243 (686)
Q Consensus 193 -~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~ 243 (686)
.+|..+..+++|+.| ++++|++++.+|..+ .+.++..+.+.+|..
T Consensus 165 ~~~~~~~~~l~~L~~L------~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 165 NFLPDIFTELRNLTFL------DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp GEECSCCTTCTTCCEE------ECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred ccchhHHhhCcCCCEE------ECCCCCcCCcCHHHhcCCCCCCEEECCCCcc
Confidence 456666666655544 666666666555433 233444455555543
No 286
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.81 E-value=4.3e-20 Score=209.34 Aligned_cols=184 Identities=21% Similarity=0.234 Sum_probs=143.6
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcc-ccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVE-LFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
.+++.|+|++|.+++..|..+..+++|+.|+|++|++.+..|.. +.++++|++|+|++|.+++..|..++.+++|+.|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 46777888888888777778888888888888888887666544 77788888888888888877777788888888888
Q ss_pred ccCCCCCCC---CChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccc
Q 042348 136 LSQNSFSSS---IPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVY 212 (686)
Q Consensus 136 ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~ 212 (686)
|++|.+++. .+..+..+++|+.|+|++|++++..|..+ ..+++|+.|+|++|++++.+|..+.++++| .|
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L----- 528 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAF-TSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YL----- 528 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTT-TTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EE-----
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhh-ccccCCCEEECCCCccCcCChhHhCccccc-EE-----
Confidence 888888752 33567788888888888888886666655 478888888888888888888877777666 44
Q ss_pred ccccCCCCCCCccccc-ccccCCcccccCCCCCCCCC
Q 042348 213 VDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFLCGPP 248 (686)
Q Consensus 213 l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~~p 248 (686)
|+++|++++.+|..+ .+.++..+.+.+||+.|.++
T Consensus 529 -~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 529 -NLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp -ECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred -ECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 999999998888754 35677788899999998543
No 287
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.81 E-value=5.6e-20 Score=201.99 Aligned_cols=189 Identities=20% Similarity=0.229 Sum_probs=164.9
Q ss_pred eeeeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCC
Q 042348 49 WNGITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSF 117 (686)
Q Consensus 49 w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l 117 (686)
|..|.|.. ..++.|+|++|+|++..|..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 67888863 3678999999999999999999999999999999999988899999999999999999999
Q ss_pred CCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchh
Q 042348 118 SGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPND 197 (686)
Q Consensus 118 ~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 197 (686)
++..+..|.++++|++|+|++|.+++..|..+..+++|+.|+|++|++++..|..+ .++++|+.|+|++|++++..+..
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAF-SGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSS-TTCTTCCEEEEESCCCSSCCHHH
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhc-cCCCCCCEEECCCCcCcccChhH
Confidence 96666678999999999999999999889999999999999999999997666665 58999999999999999988888
Q ss_pred hhcccccccccccccccccCCCCCCCccccc-ccccCCcccccCCCCC
Q 042348 198 IANLSRLRLLAQRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFL 244 (686)
Q Consensus 198 ~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~ 244 (686)
+.++++|+.| ++++|++++..+..+ .+.++..+.+.+|+.+
T Consensus 172 l~~l~~L~~L------~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~ 213 (477)
T 2id5_A 172 LSHLHGLIVL------RLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 213 (477)
T ss_dssp HTTCTTCCEE------EEESCCCCEECTTCSCSCTTCCEEEEECCTTC
T ss_pred hcccCCCcEE------eCCCCcCcEeChhhcccCcccceeeCCCCccc
Confidence 9888888765 999999998766544 3445566666676554
No 288
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.81 E-value=1.1e-20 Score=195.46 Aligned_cols=178 Identities=22% Similarity=0.252 Sum_probs=135.1
Q ss_pred CCEEEEEeCCCCccccCCcCc--CCCCCCCEEEccCCCCcccCCccccCC-----CCCcEEEccCCCCCCCCcccccCCC
Q 042348 57 GQVFSLIIPNKKLTGFIPADL--GSLSAIGRVNLRNNNFSGSLPVELFNA-----SNLQSLILSGNSFSGPVPMQIGKLK 129 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l--~~l~~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~l~ 129 (686)
.+++.|+|++|++++.+|..+ ..+++|++|+|++|+|++. |..+.++ ++|++|+|++|++++..|..|+.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 578889999999998888876 8889999999999999876 7777766 8899999999999887778888999
Q ss_pred CCCEEeccCCCCCCC--CChhh--hhccccccccccccccCC--CCchhhhhcCcccceecccccccCCCCc-hhhhccc
Q 042348 130 YLQVLDLSQNSFSSS--IPSSI--VQCKRLKTVVLNQNSFTG--PLPDGFATNLTALQKLDLSFNNLSGLIP-NDIANLS 202 (686)
Q Consensus 130 ~L~~L~ls~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~--~~p~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~ 202 (686)
+|++|+|++|++.+. +|..+ ..+++|++|+|++|++++ .++..++.++++|+.|||++|++++.+| ..+..++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 999999999988765 34444 778889999999998873 3344555577889999999999988775 3444455
Q ss_pred ccccccccccccccCCCCCCCcccccccccCCcccccCCCC
Q 042348 203 RLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPF 243 (686)
Q Consensus 203 ~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 243 (686)
+|+. |++++|+++ .+|.... .++..+++.+|..
T Consensus 254 ~L~~------L~Ls~N~l~-~ip~~~~-~~L~~L~Ls~N~l 286 (312)
T 1wwl_A 254 QLNS------LNLSFTGLK-QVPKGLP-AKLSVLDLSYNRL 286 (312)
T ss_dssp TCCE------EECTTSCCS-SCCSSCC-SEEEEEECCSSCC
T ss_pred CCCE------EECCCCccC-hhhhhcc-CCceEEECCCCCC
Confidence 5554 488888888 4444333 4455556666654
No 289
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.81 E-value=1.7e-20 Score=194.05 Aligned_cols=164 Identities=24% Similarity=0.341 Sum_probs=120.2
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCC-CCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNAS-NLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
..+++|+|++|.+++.+|..+..+++|++|+|++|+|+|.+|..+.+++ +|+.|+|++|++++.+|..+..+. |+.|+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEE
T ss_pred CCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEE
Confidence 5788888888888888888888888888888888888888888888887 888888888888877777777776 77777
Q ss_pred ccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccc--------
Q 042348 136 LSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL-------- 207 (686)
Q Consensus 136 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l-------- 207 (686)
|++|.+++.+|..+..+++|+.|+|++|++++.+|. + ..+++|++|+|++|++++.+|..+..+++|+.|
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~-~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-V-GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-C-CCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-c-cccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccc
Confidence 777777766676666677777777766666654444 2 356666666666666666666666666555433
Q ss_pred ---------cccccccccCCC-CCCC
Q 042348 208 ---------AQRVYVDLTYNN-LSGL 223 (686)
Q Consensus 208 ---------~~~~~l~l~~N~-l~~~ 223 (686)
+.+..+++++|. +.|.
T Consensus 282 ~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 282 GEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp EECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred ccCCCCccccccChHHhcCCCCccCC
Confidence 234567999997 6664
No 290
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=6.1e-20 Score=193.85 Aligned_cols=177 Identities=25% Similarity=0.256 Sum_probs=112.7
Q ss_pred EEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccc-CCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCC
Q 042348 61 SLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELF-NASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQN 139 (686)
Q Consensus 61 ~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (686)
.+++++++|+. +|..+. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45556666664 555543 3467777777777765565565 7777777777777777666666777777777777777
Q ss_pred CCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhh---hccccccccccccccccc
Q 042348 140 SFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDI---ANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~l~~~~~l~l~ 216 (686)
+|++..+..|..+++|+.|+|++|++++..|..+ ..+++|+.|+|++|+|++..+..+ ..+++|+ .|||+
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~------~L~L~ 171 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAF-EDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLM------LLDLS 171 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT-TTCTTCCEEECCSSCCCSCCGGGTC----CTTCC------EEECC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHh-CCcccCCEEECCCCcCCeeCHHHhcCcccCCcCC------EEECC
Confidence 7776556667777777777777777775444444 467777777777777776554444 2344443 34777
Q ss_pred CCCCCCCccccccc-cc--CCcccccCCCCCCCC
Q 042348 217 YNNLSGLIPQNAAL-LS--LGPTAFIGNPFLCGP 247 (686)
Q Consensus 217 ~N~l~~~~p~~~~~-~~--~~~~~~~~n~~~c~~ 247 (686)
+|+|++.++..+.. .. +..+.+.+|||.|.+
T Consensus 172 ~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 172 SNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp SSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 77777655443321 11 234567777777754
No 291
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=5.4e-20 Score=194.27 Aligned_cols=172 Identities=23% Similarity=0.234 Sum_probs=150.8
Q ss_pred cceeeeEecC-----------CCEEEEEeCCCCccccCCcCcC-CCCCCCEEEccCCCCcccCCccccCCCCCcEEEccC
Q 042348 47 CSWNGITCRE-----------GQVFSLIIPNKKLTGFIPADLG-SLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSG 114 (686)
Q Consensus 47 c~w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 114 (686)
|.|..|.|.. ..++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 6788889973 3477899999999998888888 999999999999999988888899999999999999
Q ss_pred CCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhh---hcCcccceecccccccC
Q 042348 115 NSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFA---TNLTALQKLDLSFNNLS 191 (686)
Q Consensus 115 N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---~~l~~L~~L~Ls~N~l~ 191 (686)
|+|++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|+ .+|..++ ..+++|+.|||++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9999777778999999999999999999888999999999999999999999 4777664 46999999999999999
Q ss_pred CCCchhhhcccccccccccccccccCCCCCCC
Q 042348 192 GLIPNDIANLSRLRLLAQRVYVDLTYNNLSGL 223 (686)
Q Consensus 192 ~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~ 223 (686)
+..+..+..++.+. +..|+|++|.+...
T Consensus 177 ~l~~~~~~~l~~~~----l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 177 KLPLTDLQKLPAWV----KNGLYLHNNPLECD 204 (361)
T ss_dssp CCCHHHHHHSCHHH----HTTEECCSSCEECC
T ss_pred ccCHHHhhhccHhh----cceEEecCCCccCC
Confidence 88888888887641 13459999999754
No 292
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.81 E-value=9.5e-20 Score=209.38 Aligned_cols=186 Identities=24% Similarity=0.261 Sum_probs=126.9
Q ss_pred CCEEEEEeCCCCccccCC-cCcCCCCCCCEEEccCCCCcc--------------------------cCCccccCCCCCcE
Q 042348 57 GQVFSLIIPNKKLTGFIP-ADLGSLSAIGRVNLRNNNFSG--------------------------SLPVELFNASNLQS 109 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p-~~l~~l~~L~~L~L~~N~l~g--------------------------~~p~~~~~l~~L~~ 109 (686)
..++.|+|++|.+++.+| ..+.++++|+.|+|++|++.+ .+|..+.++++|+.
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 456667777777766555 456666666666666666543 45555666666666
Q ss_pred EEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCC--------ChhhhhccccccccccccccCCCCchhhhhcCcccc
Q 042348 110 LILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSI--------PSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQ 181 (686)
Q Consensus 110 L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~--------p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~ 181 (686)
|+|++|++++..|..|..+++|+.|+|++|++++.. +..+..+++|+.|+|++|+++ .+|...+.++++|+
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELK 563 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCC
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcc
Confidence 666666666555555666666777777776666421 122566677777777777776 46655445777777
Q ss_pred eecccccccCCCCchhhhcccccccccccccccccCCCCCCCccccc--ccccCCcccccCCCCCCCCCC
Q 042348 182 KLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNA--ALLSLGPTAFIGNPFLCGPPL 249 (686)
Q Consensus 182 ~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~--~~~~~~~~~~~~n~~~c~~p~ 249 (686)
.|||++|++++.++..+.++++|+.| ++++|++++.+|..+ .+.++..+.+.+|||.|+++.
T Consensus 564 ~L~Ls~N~l~~l~~~~~~~l~~L~~L------~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 564 IIDLGLNNLNTLPASVFNNQVSLKSL------NLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEE------ECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred eeECCCCCCCcCCHhHhCCCCCCCEE------ECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 77887777777666666676666654 999999999888755 366778889999999997653
No 293
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.80 E-value=1.4e-20 Score=194.53 Aligned_cols=178 Identities=24% Similarity=0.277 Sum_probs=148.5
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCC-----CCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCC--Ccccc--c
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSL-----SAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGP--VPMQI--G 126 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l-----~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~--~p~~~--~ 126 (686)
...++.|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|.++++|++|+|++|++.|. +|..+ +
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 46799999999999997 8888877 9999999999999988889999999999999999999876 34455 8
Q ss_pred CCCCCCEEeccCCCCCC--CCC-hhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccc
Q 042348 127 KLKYLQVLDLSQNSFSS--SIP-SSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSR 203 (686)
Q Consensus 127 ~l~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 203 (686)
.+++|++|+|++|++++ .++ ..+..+++|++|+|++|++++.+|...+..+++|++|+|++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 99999999999999984 222 334577999999999999998776554457899999999999999 6677665 55
Q ss_pred cccccccccccccCCCCCCCcccccccccCCcccccCCCCC
Q 042348 204 LRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 204 L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
|+ +||+++|+|++. |....+.++..+.+.+|++.
T Consensus 276 L~------~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 276 LS------VLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp EE------EEECCSSCCCSC-CCTTTSCEEEEEECTTCTTT
T ss_pred ce------EEECCCCCCCCC-hhHhhCCCCCEEeccCCCCC
Confidence 55 459999999988 55555666777788888764
No 294
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=1.9e-20 Score=205.54 Aligned_cols=177 Identities=19% Similarity=0.176 Sum_probs=110.4
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcc--------------
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPM-------------- 123 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~-------------- 123 (686)
+++.|+|++|.+++..|..|+.+++|+.|+|++|.|++..| +.++++|++|+|++|.|++..+.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 46666666666666555666666666666666666665444 55555555555555554421110
Q ss_pred --cccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcc
Q 042348 124 --QIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANL 201 (686)
Q Consensus 124 --~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 201 (686)
....+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++.+|..+...+++|+.|+|++|.|++..+ ...+
T Consensus 113 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l 190 (487)
T 3oja_A 113 RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVF 190 (487)
T ss_dssp CEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCC
T ss_pred CCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccC
Confidence 012356777777777777777777777778888888888888776666665567777777777777776522 2234
Q ss_pred cccccccccccccccCCCCCCCcccccccccCCcccccCCCCC
Q 042348 202 SRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 202 ~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
++|+ +|+|++|+|++.+|....+.++..+++.+|...
T Consensus 191 ~~L~------~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 191 AKLK------TLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp TTCC------EEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred CCCC------EEECCCCCCCCCCHhHcCCCCccEEEecCCcCc
Confidence 4443 347777777776666545555666666666543
No 295
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=1.4e-20 Score=215.98 Aligned_cols=204 Identities=21% Similarity=0.219 Sum_probs=127.5
Q ss_pred ChhHHHHHHHHHHhccCCCCC--CCCCCCCCCCcceeeeEecCCCEEEEEeCCCCccc----------------------
Q 042348 16 ANDEGLALLSFKQAIRNFPEG--NNWNNSNEDPCSWNGITCREGQVFSLIIPNKKLTG---------------------- 71 (686)
Q Consensus 16 ~~~~~~~l~~~k~~~~~~~~~--~~w~~~~~~~c~w~gv~c~~~~~~~l~l~~n~l~g---------------------- 71 (686)
...+..+|+.+.+.+....+. ..|......++.|.++++...+++.|.|.+|.+..
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 345678999998877443333 45655444557899988887666666665444332
Q ss_pred -----cCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCC
Q 042348 72 -----FIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIP 146 (686)
Q Consensus 72 -----~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p 146 (686)
..|..+..+..|+.|+|++|.|. .+|..++++++|++|+|++|.|+ .+|..|+.|++|++|+|++|.|+ .+|
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 23566778888888888888887 78888888888888888888888 78888888888888888888888 678
Q ss_pred hhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCccc
Q 042348 147 SSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQ 226 (686)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~ 226 (686)
..+..|++|++|+|++|.|+ .+|..+ ..|++|+.|+|++|.|++.+|..+..+.... ..++|++|.++|.+|.
T Consensus 287 ~~~~~l~~L~~L~L~~N~l~-~lp~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~-----~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 287 AELGSCFQLKYFYFFDNMVT-TLPWEF-GNLCNLQFLGVEGNPLEKQFLKILTEKSVTG-----LIFYLRDNRPEIPLPH 359 (727)
T ss_dssp SSGGGGTTCSEEECCSSCCC-CCCSST-TSCTTCCCEECTTSCCCSHHHHHHHHHHHHH-----HHHHHHHCCCCCCCCC
T ss_pred hhhcCCCCCCEEECCCCCCC-ccChhh-hcCCCccEEeCCCCccCCCChHHHhhcchhh-----hHHhhccCcccCcCcc
Confidence 88888888888888888887 678775 4788888888888888888888776654321 1357888888888887
Q ss_pred ccc
Q 042348 227 NAA 229 (686)
Q Consensus 227 ~~~ 229 (686)
...
T Consensus 360 ~l~ 362 (727)
T 4b8c_D 360 ERR 362 (727)
T ss_dssp C--
T ss_pred ccc
Confidence 554
No 296
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.80 E-value=5.9e-20 Score=189.78 Aligned_cols=182 Identities=17% Similarity=0.197 Sum_probs=147.1
Q ss_pred CCEEEEEeCCCCccccCCcCc--CCCCCCCEEEccCCCCcccCC----ccccCCCCCcEEEccCCCCCCCCcccccCCCC
Q 042348 57 GQVFSLIIPNKKLTGFIPADL--GSLSAIGRVNLRNNNFSGSLP----VELFNASNLQSLILSGNSFSGPVPMQIGKLKY 130 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l--~~l~~L~~L~L~~N~l~g~~p----~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 130 (686)
.+++.|+|++|.+++..|..+ ..+++|+.|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 358999999999999999998 999999999999999998766 45568999999999999999888899999999
Q ss_pred CCEEeccCCCCCCC--C--ChhhhhccccccccccccccCCCCchh---hhhcCcccceecccccccCCCCchhhhcccc
Q 042348 131 LQVLDLSQNSFSSS--I--PSSIVQCKRLKTVVLNQNSFTGPLPDG---FATNLTALQKLDLSFNNLSGLIPNDIANLSR 203 (686)
Q Consensus 131 L~~L~ls~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 203 (686)
|++|+|++|++.+. + +..+..+++|++|+|++|+++ .++.. ++..+++|++|||++|++++.+|..+..+..
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 99999999998752 2 223468899999999999997 34442 4457899999999999999998888777642
Q ss_pred cccccccccccccCCCCCCCcccccccccCCcccccCCCCC
Q 042348 204 LRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 204 L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
+ +++.+|+|++|+|+. +|.... .++..+.+.+|...
T Consensus 250 ~---~~L~~L~Ls~N~l~~-lp~~~~-~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 250 S---SALNSLNLSFAGLEQ-VPKGLP-AKLRVLDLSSNRLN 285 (310)
T ss_dssp C---TTCCCEECCSSCCCS-CCSCCC-SCCSCEECCSCCCC
T ss_pred c---CcCCEEECCCCCCCc-hhhhhc-CCCCEEECCCCcCC
Confidence 2 223455999999994 454432 56666777777654
No 297
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.80 E-value=2.6e-20 Score=211.65 Aligned_cols=167 Identities=16% Similarity=0.296 Sum_probs=144.9
Q ss_pred CccccCCcCcCCCCCCCEEEccCCCCccc-----------------CCcccc--CCCCCcEEEccCCCCCCCCcccccCC
Q 042348 68 KLTGFIPADLGSLSAIGRVNLRNNNFSGS-----------------LPVELF--NASNLQSLILSGNSFSGPVPMQIGKL 128 (686)
Q Consensus 68 ~l~g~~p~~l~~l~~L~~L~L~~N~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l 128 (686)
+|+| +|..|+++++|++|+|++|.|+|. +|..++ ++++|++|+|++|++.|.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4556 899999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCCEEeccCCC-CCC-CCChhhhhc------cccccccccccccCCCCch--hhhhcCcccceecccccccCCCCchhh
Q 042348 129 KYLQVLDLSQNS-FSS-SIPSSIVQC------KRLKTVVLNQNSFTGPLPD--GFATNLTALQKLDLSFNNLSGLIPNDI 198 (686)
Q Consensus 129 ~~L~~L~ls~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 198 (686)
++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .+ .++++|++|+|++|+++|.+| .+
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l-~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL-QKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH-TTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh-ccCCCCCEEeCcCCcCccchh-hh
Confidence 999999999998 998 899999887 99999999999999 7888 66 589999999999999999999 88
Q ss_pred hcccccccccccccccccCCCCCCCccccccccc-CCcccccCCCCC
Q 042348 199 ANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLS-LGPTAFIGNPFL 244 (686)
Q Consensus 199 ~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~-~~~~~~~~n~~~ 244 (686)
+++++|+.| ++++|+++..+.....+.+ +..+.+.+|...
T Consensus 350 ~~l~~L~~L------~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~ 390 (636)
T 4eco_A 350 GSEIKLASL------NLAYNQITEIPANFCGFTEQVENLSFAHNKLK 390 (636)
T ss_dssp EEEEEESEE------ECCSSEEEECCTTSEEECTTCCEEECCSSCCS
T ss_pred CCCCCCCEE------ECCCCccccccHhhhhhcccCcEEEccCCcCc
Confidence 888777655 8888888843333344555 666777777654
No 298
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.80 E-value=4.7e-19 Score=184.89 Aligned_cols=188 Identities=19% Similarity=0.254 Sum_probs=137.4
Q ss_pred cceeeeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCC
Q 042348 47 CSWNGITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGN 115 (686)
Q Consensus 47 c~w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 115 (686)
|.|..+.|.. ..++.|+|++|.+++..|..|.++++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 6899999972 36889999999999988889999999999999999999888999999999999999999
Q ss_pred CCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCC--CCchhhhhcC----------------
Q 042348 116 SFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG--PLPDGFATNL---------------- 177 (686)
Q Consensus 116 ~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~~l---------------- 177 (686)
+++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|+|++|.++. ..|..+ ..+
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~l~L~~L~l~~n~l~~l~ 188 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF-DGLKLNYLRISEAKLTGIP 188 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSS-CSCCCSCCBCCSSBCSSCC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccc-cCCccCEEECcCCCCCccC
Confidence 998 6666554 677788888877776555567777777777777776642 223222 122
Q ss_pred ----cccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCccccc-ccccCCcccccCCCCC
Q 042348 178 ----TALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFL 244 (686)
Q Consensus 178 ----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~ 244 (686)
++|+.|+|++|++++..|..+..+++|+. |++++|++++..|..+ .+.++..+.+.+|...
T Consensus 189 ~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~------L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 189 KDLPETLNELHLDHNKIQAIELEDLLRYSKLYR------LGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp SSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSC------CBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred ccccCCCCEEECCCCcCCccCHHHhcCCCCCCE------EECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 35666666666666665566666655554 4777777777666433 3445555666666544
No 299
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.80 E-value=1.2e-19 Score=179.99 Aligned_cols=178 Identities=13% Similarity=0.159 Sum_probs=148.2
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCC-CcccCCccccCCCCCcEEEccC-CCCCCCCcccccCCCCCCEE
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNN-FSGSLPVELFNASNLQSLILSG-NSFSGPVPMQIGKLKYLQVL 134 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L 134 (686)
..++.|+|++|++++..+..|..+++|+.|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 578999999999999888899999999999999997 8866677899999999999999 99997777889999999999
Q ss_pred eccCCCCCCCCChhhhhccccc---ccccccc-ccCCCCchhhhhcCcccc-eecccccccCCCCchhhhcccccccccc
Q 042348 135 DLSQNSFSSSIPSSIVQCKRLK---TVVLNQN-SFTGPLPDGFATNLTALQ-KLDLSFNNLSGLIPNDIANLSRLRLLAQ 209 (686)
Q Consensus 135 ~ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~l~~ 209 (686)
+|++|.+++ +|. +..+++|+ +|+|++| ++++ +|...+..+++|+ .|+|++|+++...+..+.. ++|+.|
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~-i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L-- 184 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTS-IPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAV-- 184 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCE-ECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEE--
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhh-cCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEE--
Confidence 999999996 776 88888888 9999999 9984 5555446899999 9999999999544444444 666654
Q ss_pred cccccccCC-CCCCCcccccc-c-ccCCcccccCCCCC
Q 042348 210 RVYVDLTYN-NLSGLIPQNAA-L-LSLGPTAFIGNPFL 244 (686)
Q Consensus 210 ~~~l~l~~N-~l~~~~p~~~~-~-~~~~~~~~~~n~~~ 244 (686)
++++| ++++..+..+. + .++..+.+.+|+..
T Consensus 185 ----~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 185 ----YLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp ----ECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred ----EcCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 99999 49977666554 3 46667777777654
No 300
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.80 E-value=3.8e-19 Score=179.79 Aligned_cols=162 Identities=22% Similarity=0.243 Sum_probs=143.5
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.+++.|+|++|.++...+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 57999999999999776677899999999999999999777777899999999999999999888888999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|.+++..+..+..+++|+.|+|++|++++ +|...+..+++|++|+|++|++++..+..+..+++|+.| +++
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------~l~ 213 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKML------QLQ 213 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE------ECC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcE-eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEE------Eec
Confidence 9999997777778999999999999999996 555444689999999999999998887778888877655 999
Q ss_pred CCCCCCCcc
Q 042348 217 YNNLSGLIP 225 (686)
Q Consensus 217 ~N~l~~~~p 225 (686)
+|.+....+
T Consensus 214 ~N~~~c~c~ 222 (270)
T 2o6q_A 214 ENPWDCTCN 222 (270)
T ss_dssp SSCBCCSSS
T ss_pred CCCeeCCCc
Confidence 999976544
No 301
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.9e-19 Score=175.98 Aligned_cols=148 Identities=20% Similarity=0.266 Sum_probs=134.4
Q ss_pred cceeeeEecC-----------CCEEEEEeCCCCccccCCc-CcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccC
Q 042348 47 CSWNGITCRE-----------GQVFSLIIPNKKLTGFIPA-DLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSG 114 (686)
Q Consensus 47 c~w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~-~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 114 (686)
|.|..+.|.. ..++.|+|++|+|++..|. .|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 6799999973 2467899999999998664 589999999999999999988888999999999999999
Q ss_pred CCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCC
Q 042348 115 NSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLI 194 (686)
Q Consensus 115 N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 194 (686)
|++++..|..|..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..|..+ ..+++|+.|+|++|.++...
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF-DTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT-TTCTTCCEEECCSCCEECSG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh-cCCCCCCEEEecCcCCcCCC
Confidence 99998888889999999999999999999889999999999999999999998767766 58999999999999999754
Q ss_pred c
Q 042348 195 P 195 (686)
Q Consensus 195 p 195 (686)
+
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 4
No 302
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.79 E-value=1.5e-19 Score=204.84 Aligned_cols=181 Identities=18% Similarity=0.135 Sum_probs=160.4
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47899999999999999999999999999999999999989999999999999999999999888999999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|.+++..|..+..+++|++|+|++|++++..++.+. .+++|++|+|++|.+++..|..++.+++|+.+ .++++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l----~L~l~ 187 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF-PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNL----SLNLN 187 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTC-CCTTCCEEECCSSCCCEECHHHHHTTTTCCSE----EEECT
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCccccc-CCcccCEEEcccCcccccChhhhhhhccccee----EEecC
Confidence 99999987688899999999999999999973333443 59999999999999999999999999888743 45999
Q ss_pred CCCCCCCcccccccccCCcccccCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNP 242 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~ 242 (686)
+|++++.+|..+....+....+.+|.
T Consensus 188 ~n~l~~~~~~~~~~~~L~~L~l~~~~ 213 (606)
T 3t6q_A 188 GNDIAGIEPGAFDSAVFQSLNFGGTQ 213 (606)
T ss_dssp TCCCCEECTTTTTTCEEEEEECTTCS
T ss_pred CCccCccChhHhhhccccccccCCch
Confidence 99999998887765555555565554
No 303
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.8e-19 Score=180.72 Aligned_cols=132 Identities=18% Similarity=0.175 Sum_probs=103.7
Q ss_pred cccCccCceEEEEEEe-CCCce--EEEEEcCCCCcc------------------------chHHHHHHHHHHhccCCCCc
Q 042348 373 FLLGKSTIGIVYKVAL-NNEEA--VAVRRLGNGGWQ------------------------RFKEFQTEAEAIGKIRHPNI 425 (686)
Q Consensus 373 ~~iG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H~nI 425 (686)
..||+|+||.||+|.. .+|+. ||||.++..... ....+.+|++++.+++|++|
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 132 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV 132 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4699999999999998 67888 999987543111 01357899999999988864
Q ss_pred --ceeeEEEEecCceeEEEeccCC-C----CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHH-ccCCCCceecC
Q 042348 426 --VSLRAYFWSVDEKLLIYDYIPN-G----SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLH-EVSPKRYVHGD 497 (686)
Q Consensus 426 --v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH-~~~~~~iiHrD 497 (686)
+..+++ +..++||||+.+ | +|.++... .++..+..++.|++.||+||| + .+|+|||
T Consensus 133 ~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~~---~givHrD 196 (258)
T 1zth_A 133 SVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQE---AELVHAD 196 (258)
T ss_dssp CCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred CCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence 344432 367899999942 4 67766432 234567899999999999999 8 8999999
Q ss_pred CCCCCeeecCCCCeEEeecCccccc
Q 042348 498 LRPSNILLGKNMEPHISDFGLARLA 522 (686)
Q Consensus 498 lkp~NILl~~~~~~kl~DfGla~~~ 522 (686)
|||+|||+++ .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999988 9999999999754
No 304
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.79 E-value=1.2e-19 Score=203.66 Aligned_cols=161 Identities=27% Similarity=0.332 Sum_probs=132.2
Q ss_pred CCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCC--CCcccccCCCCCCEEeccCCCCCCCCCh-hhhhccc
Q 042348 78 GSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSG--PVPMQIGKLKYLQVLDLSQNSFSSSIPS-SIVQCKR 154 (686)
Q Consensus 78 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~ 154 (686)
..+++|+.|+|++|++++.+|..+.++++|+.|+|++|++++ .+|..++.+++|+.|+|++|.+++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 678899999999999998899999999999999999999986 3456788999999999999999975665 4778899
Q ss_pred cccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCccc-ccccccC
Q 042348 155 LKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQ-NAALLSL 233 (686)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~-~~~~~~~ 233 (686)
|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+.++++|+.| ++++|++++.++. ...+..+
T Consensus 430 L~~L~l~~n~l~~~~~~~l~---~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L------~L~~N~l~~l~~~~~~~l~~L 499 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP---PKVKVLDLHNNRIM-SIPKDVTHLQALQEL------NVASNQLKSVPDGVFDRLTSL 499 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC---TTCSEEECCSSCCC-CCCTTTTSSCCCSEE------ECCSSCCCCCCTTSTTTCTTC
T ss_pred CCEEECCCCCCCcchhhhhc---CcCCEEECCCCcCc-ccChhhcCCCCCCEE------ECCCCCCCCCCHHHHhcCCCC
Confidence 99999999999876665431 68999999999999 567766677777655 9999999976555 3456677
Q ss_pred CcccccCCCCCCCCC
Q 042348 234 GPTAFIGNPFLCGPP 248 (686)
Q Consensus 234 ~~~~~~~n~~~c~~p 248 (686)
..+.+.+||+.|.++
T Consensus 500 ~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 500 QYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCEECCSCCBCCCHH
T ss_pred CEEEecCCCcCCCcc
Confidence 778899999998654
No 305
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.79 E-value=9.3e-19 Score=182.50 Aligned_cols=189 Identities=21% Similarity=0.287 Sum_probs=128.1
Q ss_pred CcceeeeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccC
Q 042348 46 PCSWNGITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSG 114 (686)
Q Consensus 46 ~c~w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 114 (686)
.|.|..+.|.. ..++.|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 36799999972 3678899999999998888999999999999999999988899999999999999999
Q ss_pred CCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCC--CCchhhhhcCcc-------------
Q 042348 115 NSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG--PLPDGFATNLTA------------- 179 (686)
Q Consensus 115 N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~~l~~------------- 179 (686)
|+++ .+|..+. ++|+.|++++|.+++..+..+..+++|+.|+|++|+++. ..+..+ ..+++
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF-QGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG-GGCTTCCEEECCSSCCCS
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhc-cCCCCcCEEECCCCcccc
Confidence 9987 5665443 566666666666665555555555666666666555532 223333 24444
Q ss_pred --------cceecccccccCCCCchhhhcccccccccccccccccCCCCCCCccccc-ccccCCcccccCCCCC
Q 042348 180 --------LQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFL 244 (686)
Q Consensus 180 --------L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~ 244 (686)
|+.|+|++|++++..|..+..+++|+ .|++++|++++..+..+ .+.++..+.+.+|...
T Consensus 186 l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~------~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 186 IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLA------KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp CCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCC------EEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred CCccccccCCEEECCCCcCCccCHHHhcCCCCCC------EEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 44455555555554455555554444 33777777776655332 3445555566666543
No 306
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.79 E-value=9.5e-20 Score=202.49 Aligned_cols=161 Identities=25% Similarity=0.315 Sum_probs=113.2
Q ss_pred CCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCC--CCcccccCCCCCCEEeccCCCCCCCCChh-hhhccc
Q 042348 78 GSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSG--PVPMQIGKLKYLQVLDLSQNSFSSSIPSS-IVQCKR 154 (686)
Q Consensus 78 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~ 154 (686)
..+++|+.|+|++|++++.+|..+.++++|++|+|++|++++ .+|..++.+++|++|+|++|.+++.+|.. +..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 566777777777777777777777777777777777777775 45566777777777777777777655543 666777
Q ss_pred cccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCccc-ccccccC
Q 042348 155 LKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQ-NAALLSL 233 (686)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~-~~~~~~~ 233 (686)
|+.|+|++|++++.+|..+. ++|+.|||++|+++ .+|..+..+++|+.| ++++|+++..++. ...+.++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~---~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L------~L~~N~l~~l~~~~~~~l~~L 470 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP---PRIKVLDLHSNKIK-SIPKQVVKLEALQEL------NVASNQLKSVPDGIFDRLTSL 470 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC---TTCCEEECCSSCCC-CCCGGGGGCTTCCEE------ECCSSCCCCCCTTTTTTCTTC
T ss_pred CCEEECcCCCCCcchhhhhc---ccCCEEECCCCccc-ccchhhhcCCCCCEE------ECCCCcCCccCHHHhccCCcc
Confidence 77777777777765554331 57788888888887 566666666666654 8888888865444 2345566
Q ss_pred CcccccCCCCCCCCC
Q 042348 234 GPTAFIGNPFLCGPP 248 (686)
Q Consensus 234 ~~~~~~~n~~~c~~p 248 (686)
..+.+.+|++.|.++
T Consensus 471 ~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 471 QKIWLHTNPWDCSCP 485 (520)
T ss_dssp CEEECCSSCBCCCHH
T ss_pred cEEECcCCCCcccCC
Confidence 777788888887543
No 307
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.79 E-value=3.6e-19 Score=200.97 Aligned_cols=142 Identities=23% Similarity=0.208 Sum_probs=108.1
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEecc
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLS 137 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 137 (686)
.+..|++++|.++...+..+..+++|+.|+|++|.|++..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 45677888888877655667778888888888888887777788888888888888888887777777888888888888
Q ss_pred CCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhc
Q 042348 138 QNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIAN 200 (686)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 200 (686)
+|.+++..+..|..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+..+.+
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~l~~ 193 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF-QATTSLQNLQLSSNRLTHVDLSLIPS 193 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT-TTCTTCCEEECTTSCCSBCCGGGCTT
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh-hcCCcCcEEECcCCCCCCcChhhhhh
Confidence 888886555556788888888888888886555555 47888888888888888764444333
No 308
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=2.7e-19 Score=174.92 Aligned_cols=155 Identities=26% Similarity=0.379 Sum_probs=137.5
Q ss_pred CEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhcccccccccccc
Q 042348 84 GRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQN 163 (686)
Q Consensus 84 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (686)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 47899999998 7887665 78999999999999777778999999999999999999888999999999999999999
Q ss_pred ccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCcccccc-cccCCcccccCCC
Q 042348 164 SFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAA-LLSLGPTAFIGNP 242 (686)
Q Consensus 164 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~ 242 (686)
+|+ .+|...+..+++|+.|+|++|+|++..|..+.++++|+.| +|++|++++..+..+. +.++..+.+.+|+
T Consensus 91 ~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 163 (220)
T 2v9t_B 91 KIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLL------SLYDNKLQTIAKGTFSPLRAIQTMHLAQNP 163 (220)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE------ECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEE------ECCCCcCCEECHHHHhCCCCCCEEEeCCCC
Confidence 999 5777766789999999999999999999999998888765 9999999998886543 5677788899999
Q ss_pred CCCCCC
Q 042348 243 FLCGPP 248 (686)
Q Consensus 243 ~~c~~p 248 (686)
+.|.+.
T Consensus 164 ~~c~c~ 169 (220)
T 2v9t_B 164 FICDCH 169 (220)
T ss_dssp EECSGG
T ss_pred cCCCCc
Confidence 998643
No 309
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.78 E-value=4.1e-19 Score=200.47 Aligned_cols=111 Identities=18% Similarity=0.146 Sum_probs=102.7
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|.+++..|..|+.+++|+.|+|++|.|++..|..|.++++|++|+|++|.|++..+..|+.+++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 47889999999999988889999999999999999999888888999999999999999999665666799999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCC
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG 167 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 167 (686)
++|.+++..|..+..+++|+.|+|++|.+++
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 9999998888899999999999999999985
No 310
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.78 E-value=3.9e-19 Score=208.78 Aligned_cols=175 Identities=17% Similarity=0.164 Sum_probs=153.9
Q ss_pred cceeeeEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccC-CccccCCCCCcEEEccCCCCCCCCcccc
Q 042348 47 CSWNGITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSL-PVELFNASNLQSLILSGNSFSGPVPMQI 125 (686)
Q Consensus 47 c~w~gv~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~g~~p~~~ 125 (686)
|.|..|-+....++.|+|++|.+++..|..|.++++|+.|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 346666665678999999999999999999999999999999999777676 7889999999999999999998889999
Q ss_pred cCCCCCCEEeccCCCCCCCCChh--hhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcc--
Q 042348 126 GKLKYLQVLDLSQNSFSSSIPSS--IVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANL-- 201 (686)
Q Consensus 126 ~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-- 201 (686)
+++++|++|+|++|.+++.+|.. +..+++|++|+|++|.+++..+...+.++++|++|+|++|.+++..|..+..+
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~ 173 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQG 173 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccC
Confidence 99999999999999999877765 89999999999999999977665444699999999999999999999998887
Q ss_pred cccccccccccccccCCCCCCCcccc
Q 042348 202 SRLRLLAQRVYVDLTYNNLSGLIPQN 227 (686)
Q Consensus 202 ~~L~~l~~~~~l~l~~N~l~~~~p~~ 227 (686)
++|+ .|++++|.+++..|..
T Consensus 174 ~~L~------~L~L~~n~l~~~~~~~ 193 (844)
T 3j0a_A 174 KTLS------FFSLAANSLYSRVSVD 193 (844)
T ss_dssp CSSC------CCEECCSBSCCCCCCC
T ss_pred Cccc------eEECCCCccccccccc
Confidence 5555 4488888888876653
No 311
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.78 E-value=2.1e-19 Score=197.38 Aligned_cols=93 Identities=22% Similarity=0.274 Sum_probs=59.1
Q ss_pred ccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccc------------------cccccccccC
Q 042348 156 KTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL------------------AQRVYVDLTY 217 (686)
Q Consensus 156 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l------------------~~~~~l~l~~ 217 (686)
+.|+|++|+++ .+|...+..+++|+.|+|++|.+++..+..+.++++|+.| +.+..|+|++
T Consensus 227 ~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (477)
T 2id5_A 227 TSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 305 (477)
T ss_dssp SEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCS
T ss_pred cEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCC
Confidence 33333444444 3443334566777777777777776666666655555433 2345668999
Q ss_pred CCCCCCccccc-ccccCCcccccCCCCCCCCCC
Q 042348 218 NNLSGLIPQNA-ALLSLGPTAFIGNPFLCGPPL 249 (686)
Q Consensus 218 N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~~p~ 249 (686)
|++++..+..+ .+.++..+.+.+|++.|.++.
T Consensus 306 N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 306 NQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp SCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred CcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 99988777654 356677788899999887543
No 312
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.78 E-value=6.2e-19 Score=180.00 Aligned_cols=175 Identities=25% Similarity=0.269 Sum_probs=150.5
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.+++++|+|+. +|..+. +.|+.|+|++|.|++..|..|.++++|+.|+|++|.+++ ++.. +.+++|++|+|
T Consensus 10 ~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~L 84 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDL 84 (290)
T ss_dssp TTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEEC
T ss_pred CCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEEC
Confidence 568899999999995 676664 789999999999998888999999999999999999985 4443 88999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|.++ .+|..+..+++|++|+|++|++++..|..+ ..+++|++|+|++|+|++.++..+..+++|+.| +|+
T Consensus 85 s~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------~L~ 156 (290)
T 1p9a_G 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGAL-RGLGELQELYLKGNELKTLPPGLLTPTPKLEKL------SLA 156 (290)
T ss_dssp CSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTT-TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE------ECT
T ss_pred CCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHH-cCCCCCCEEECCCCCCCccChhhcccccCCCEE------ECC
Confidence 999999 788899999999999999999996444444 689999999999999999888888888887765 999
Q ss_pred CCCCCCCcccccc-cccCCcccccCCCCC
Q 042348 217 YNNLSGLIPQNAA-LLSLGPTAFIGNPFL 244 (686)
Q Consensus 217 ~N~l~~~~p~~~~-~~~~~~~~~~~n~~~ 244 (686)
+|+|++.++..+. +.++..+.+.+|...
T Consensus 157 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 157 NNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 9999987776543 667777788888764
No 313
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.77 E-value=3.3e-19 Score=197.52 Aligned_cols=153 Identities=25% Similarity=0.380 Sum_probs=115.6
Q ss_pred CCCCCCCCCc-----ceeee-EecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEE
Q 042348 38 NWNNSNEDPC-----SWNGI-TCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLI 111 (686)
Q Consensus 38 ~w~~~~~~~c-----~w~gv-~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 111 (686)
+|.. +.+|| .|.|+ .|..++++.|+|++|+|++ +|..+. ++|+.|+|++|+|+ .+| ..+++|++|+
T Consensus 35 ~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~ 106 (571)
T 3cvr_A 35 KWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLD 106 (571)
T ss_dssp HHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEE
T ss_pred HHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEE
Confidence 4654 35788 79999 7988899999999999998 787664 78999999999998 677 4578899999
Q ss_pred ccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccC
Q 042348 112 LSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLS 191 (686)
Q Consensus 112 L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 191 (686)
|++|+|++ +|. +.. +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+
T Consensus 107 Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 107 ACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE----LPTSLEVLSVRNNQLT 173 (571)
T ss_dssp CCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCS
T ss_pred ccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC----cCCCcCEEECCCCCCC
Confidence 99999986 776 655 88888888888886 665 57788888888888875 665 4667777777777777
Q ss_pred CCCchhhhcccccccccccccccccCCCCC
Q 042348 192 GLIPNDIANLSRLRLLAQRVYVDLTYNNLS 221 (686)
Q Consensus 192 ~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~ 221 (686)
+ +|. +. ++|+. |+|++|+|+
T Consensus 174 ~-lp~-l~--~~L~~------L~Ls~N~L~ 193 (571)
T 3cvr_A 174 F-LPE-LP--ESLEA------LDVSTNLLE 193 (571)
T ss_dssp C-CCC-CC--TTCCE------EECCSSCCS
T ss_pred C-cch-hh--CCCCE------EECcCCCCC
Confidence 6 444 43 33332 355555555
No 314
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.77 E-value=3.3e-19 Score=176.81 Aligned_cols=171 Identities=19% Similarity=0.188 Sum_probs=146.4
Q ss_pred CCEEEEEeCCCC-ccccCCcCcCCCCCCCEEEccC-CCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCC--
Q 042348 57 GQVFSLIIPNKK-LTGFIPADLGSLSAIGRVNLRN-NNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQ-- 132 (686)
Q Consensus 57 ~~~~~l~l~~n~-l~g~~p~~l~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~-- 132 (686)
.+++.|+|++|+ +++..+..|..+++|++|+|++ |+|++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 579999999997 8887777999999999999999 99997777889999999999999999996 776 89999999
Q ss_pred -EEeccCC-CCCCCCChhhhhccccc-cccccccccCCCCchhhhhcCcccceecccccc-cCCCCchhhhcc-cccccc
Q 042348 133 -VLDLSQN-SFSSSIPSSIVQCKRLK-TVVLNQNSFTGPLPDGFATNLTALQKLDLSFNN-LSGLIPNDIANL-SRLRLL 207 (686)
Q Consensus 133 -~L~ls~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~l 207 (686)
.|++++| .+++..+..+..+++|+ .|+|++|+++ .+|...+.. ++|+.|+|++|+ +++..+..+.++ ++|+.|
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 9999999 99977777899999999 9999999999 788776644 899999999995 998888888888 777755
Q ss_pred cccccccccCCCCCCCcccccccccCCccccc
Q 042348 208 AQRVYVDLTYNNLSGLIPQNAALLSLGPTAFI 239 (686)
Q Consensus 208 ~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~ 239 (686)
|+++|++++.++. .+..+..+.+.
T Consensus 211 ------~l~~N~l~~l~~~--~~~~L~~L~l~ 234 (239)
T 2xwt_C 211 ------DVSQTSVTALPSK--GLEHLKELIAR 234 (239)
T ss_dssp ------ECTTCCCCCCCCT--TCTTCSEEECT
T ss_pred ------ECCCCccccCChh--HhccCceeecc
Confidence 9999999976554 33344434333
No 315
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=2.5e-19 Score=207.52 Aligned_cols=177 Identities=23% Similarity=0.320 Sum_probs=154.6
Q ss_pred CCCEEEEEeCCCCccc-----------------cCCcCcC--CCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCC
Q 042348 56 EGQVFSLIIPNKKLTG-----------------FIPADLG--SLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNS 116 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g-----------------~~p~~l~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~ 116 (686)
-..++.|+|++|+|+| .+|..++ +|++|+.|+|++|.+.|.+|..|.++++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3689999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred -CCC-CCcccccCCC-------CCCEEeccCCCCCCCCCh--hhhhccccccccccccccCCCCchhhhhcCcccceecc
Q 042348 117 -FSG-PVPMQIGKLK-------YLQVLDLSQNSFSSSIPS--SIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDL 185 (686)
Q Consensus 117 -l~g-~~p~~~~~l~-------~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L 185 (686)
++| .+|..++.++ +|+.|+|++|.++ .+|. .+..+++|+.|+|++|+++ .+| .+ ..+++|+.|+|
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~-~~L~~L~~L~L 602 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AF-GTNVKLTDLKL 602 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CC-CTTSEESEEEC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hh-cCCCcceEEEC
Confidence 998 8998777665 9999999999999 8998 9999999999999999999 899 55 58999999999
Q ss_pred cccccCCCCchhhhcccc-cccccccccccccCCCCCCCccccccccc---CCcccccCCCCC
Q 042348 186 SFNNLSGLIPNDIANLSR-LRLLAQRVYVDLTYNNLSGLIPQNAALLS---LGPTAFIGNPFL 244 (686)
Q Consensus 186 s~N~l~~~~p~~~~~l~~-L~~l~~~~~l~l~~N~l~~~~p~~~~~~~---~~~~~~~~n~~~ 244 (686)
++|+++ .+|..+.++++ |+.| +|++|+++ .+|....... +..+.+.+|...
T Consensus 603 s~N~l~-~lp~~l~~l~~~L~~L------~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~ 657 (876)
T 4ecn_A 603 DYNQIE-EIPEDFCAFTDQVEGL------GFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIG 657 (876)
T ss_dssp CSSCCS-CCCTTSCEECTTCCEE------ECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTT
T ss_pred cCCccc-cchHHHhhccccCCEE------ECcCCCCC-cCchhhhccccCCCCEEECcCCcCC
Confidence 999999 78888888887 7765 99999999 5665543322 445566666543
No 316
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.77 E-value=3.3e-18 Score=165.73 Aligned_cols=157 Identities=24% Similarity=0.278 Sum_probs=135.1
Q ss_pred EEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCC
Q 042348 60 FSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQN 139 (686)
Q Consensus 60 ~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (686)
+.++++++.++. +|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 467889999885 56554 468999999999999777777899999999999999999776677899999999999999
Q ss_pred CCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCC
Q 042348 140 SFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNN 219 (686)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~ 219 (686)
++++..+..+..+++|++|+|++|++++ +|...+..+++|++|+|++|++++..+..+..+++|+.| ++++|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L------~l~~N~ 159 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYI------WLHDNP 159 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE------ECCSCC
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcc-cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEE------EecCCC
Confidence 9997777778999999999999999995 555544689999999999999998887778888877755 999999
Q ss_pred CCCCccc
Q 042348 220 LSGLIPQ 226 (686)
Q Consensus 220 l~~~~p~ 226 (686)
+.+..|.
T Consensus 160 ~~~~~~~ 166 (208)
T 2o6s_A 160 WDCTCPG 166 (208)
T ss_dssp BCCCTTT
T ss_pred eecCCCC
Confidence 9987764
No 317
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.77 E-value=1e-18 Score=196.35 Aligned_cols=182 Identities=24% Similarity=0.249 Sum_probs=159.2
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 47899999999999998899999999999999999999888889999999999999999999888889999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCC-CCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG-PLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDL 215 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l 215 (686)
++|++++..+..+..+++|++|+|++|.+++ .+|..+ .++++|++|+|++|++++..|..++.+.+|..+ ...+++
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~--~~~L~l 184 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF-SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL--NLSLDL 184 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGG-GGCTTCCEEECTTSCCCEECGGGGHHHHTCTTC--CCEEEC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhh-cccCCCCEEeCcCCccceecHHHccchhccchh--hhhccc
Confidence 9999997666679999999999999999987 478877 489999999999999999989889888877322 135699
Q ss_pred cCCCCCCCcccccccccCCcccccCC
Q 042348 216 TYNNLSGLIPQNAALLSLGPTAFIGN 241 (686)
Q Consensus 216 ~~N~l~~~~p~~~~~~~~~~~~~~~n 241 (686)
++|.+++..|..+...++..+.+.+|
T Consensus 185 ~~n~l~~~~~~~~~~~~L~~L~l~~n 210 (570)
T 2z63_A 185 SLNPMNFIQPGAFKEIRLHKLTLRNN 210 (570)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCceecCHHHhccCcceeEecccc
Confidence 99999998887665545555555555
No 318
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.77 E-value=9.3e-19 Score=186.99 Aligned_cols=142 Identities=23% Similarity=0.207 Sum_probs=112.3
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|++++|.++...+..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 45677888888888655555788888999999999888777778888889999999999988777778888899999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhh
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIA 199 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 199 (686)
++|.++...+..+..+++|++|+|++|++++..|..+ ..+++|+.|+|++|++++.....+.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~l~ 186 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF-QATTSLQNLQLSSNRLTHVDLSLIP 186 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT-SSCTTCCEEECCSSCCSBCCGGGCT
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhc-cCCCCCCEEECCCCcCCcccccccc
Confidence 9998885444446888889999999998886545444 5788888888888888876443333
No 319
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.76 E-value=2e-18 Score=184.44 Aligned_cols=111 Identities=18% Similarity=0.146 Sum_probs=94.3
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.++++|+|++|.+++..+..|..+++|+.|+|++|.+++..|..|.++++|++|+|++|.++...+..|..+++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 57888999999998887788999999999999999998777888889999999999999998444444688899999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCC
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG 167 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 167 (686)
++|.+++..|..+..+++|++|+|++|++++
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 9999987777788888889999998888874
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.76 E-value=1.1e-19 Score=188.38 Aligned_cols=169 Identities=18% Similarity=0.172 Sum_probs=92.5
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.+++.|+|++|.+++..| +..+++|++|+|++|+|++.. ..++|++|+|++|++++..+. .+++|+.|+|
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l 127 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYL 127 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEEC
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEEC
Confidence 466677777777766544 666777777777777666321 124444444444444432222 2455666666
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|++++..|..+..+++|++|+|++|++++..|..+...+++|++|+|++|++++. |.. ..+++|+ .|+++
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~-~~l~~L~------~L~Ls 199 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQ-VVFAKLK------TLDLS 199 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECC-CCCTTCC------EEECC
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccc-cccccCC------EEECC
Confidence 666666555556666666666666666666544444444556666666666666644 211 1233333 33566
Q ss_pred CCCCCCCcccccccccCCcccccCCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNPF 243 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~~ 243 (686)
+|++++.++....+.++..+.+.+|..
T Consensus 200 ~N~l~~l~~~~~~l~~L~~L~L~~N~l 226 (317)
T 3o53_A 200 SNKLAFMGPEFQSAAGVTWISLRNNKL 226 (317)
T ss_dssp SSCCCEECGGGGGGTTCSEEECTTSCC
T ss_pred CCcCCcchhhhcccCcccEEECcCCcc
Confidence 666655544433444444555555543
No 321
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=3.2e-18 Score=168.35 Aligned_cols=154 Identities=27% Similarity=0.325 Sum_probs=132.6
Q ss_pred CCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccc
Q 042348 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQ 162 (686)
Q Consensus 83 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (686)
.+.++.++|.+. .+|..+. ++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 457899999997 7887664 8999999999999998899999999999999999999876667789999999999999
Q ss_pred cccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCccccc-ccccCCcccccCC
Q 042348 163 NSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNA-ALLSLGPTAFIGN 241 (686)
Q Consensus 163 N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n 241 (686)
|+|++ +|...+..+++|+.|+|++|+|+ .+|..+..+++|+.| +|++|+|++.++..+ .+.++..+.+.+|
T Consensus 98 N~l~~-l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L------~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 169 (229)
T 3e6j_A 98 NQLTV-LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHL------ALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169 (229)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEE------ECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CcCCc-cChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEE------ECCCCcCCccCHHHHhCCCCCCEEEeeCC
Confidence 99995 55555568999999999999999 578888888877755 999999998877544 3567778889999
Q ss_pred CCCCCC
Q 042348 242 PFLCGP 247 (686)
Q Consensus 242 ~~~c~~ 247 (686)
++.|.+
T Consensus 170 ~~~c~c 175 (229)
T 3e6j_A 170 PWDCEC 175 (229)
T ss_dssp CBCTTB
T ss_pred CccCCc
Confidence 999854
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.76 E-value=2.2e-18 Score=174.75 Aligned_cols=165 Identities=19% Similarity=0.198 Sum_probs=109.7
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.+++.|+|++|.+++..+..|..+++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+..++.+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 45667777777777666666777777777777777776666666666777777777777766555556666667777777
Q ss_pred cCCCCCCC-CChhhhhccccccccccccccCCCCchhhh--------------------------hcCcccceecccccc
Q 042348 137 SQNSFSSS-IPSSIVQCKRLKTVVLNQNSFTGPLPDGFA--------------------------TNLTALQKLDLSFNN 189 (686)
Q Consensus 137 s~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--------------------------~~l~~L~~L~Ls~N~ 189 (686)
++|.+++. +|..+..+++|++|+|++|++++..+..+. ....+|+.|+|++|+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~ 211 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQ 211 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSC
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCc
Confidence 77766642 466666666666666666666643332221 022367778888888
Q ss_pred cCCCCchhhhcccccccccccccccccCCCCCCCcccc
Q 042348 190 LSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQN 227 (686)
Q Consensus 190 l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~ 227 (686)
+++.++..+..+++|+.| ++++|.+++..|..
T Consensus 212 l~~~~~~~~~~l~~L~~L------~l~~N~~~c~c~~l 243 (276)
T 2z62_A 212 LKSVPDGIFDRLTSLQKI------WLHTNPWDCSCPRI 243 (276)
T ss_dssp CSCCCTTTTTTCCSCCEE------ECCSSCBCCCTTTT
T ss_pred eeecCHhHhcccccccEE------EccCCcccccCCch
Confidence 887766666777666654 99999999877643
No 323
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.75 E-value=3.3e-19 Score=200.45 Aligned_cols=184 Identities=23% Similarity=0.228 Sum_probs=155.7
Q ss_pred CCEEEEEeCCCCccccC--CcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCc-ccccCCCCCCE
Q 042348 57 GQVFSLIIPNKKLTGFI--PADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVP-MQIGKLKYLQV 133 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~--p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~ 133 (686)
..++.|+|++|.+++.. |..+..+++|+.|+|++|.+.+. |..+.++++|+.|+|++|.+++..| ..+..+++|+.
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 56788888888888654 67788889999999999998854 4448899999999999999987666 56889999999
Q ss_pred EeccCCCCCCCCChhhhhccccccccccccccC-CCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccc
Q 042348 134 LDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFT-GPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVY 212 (686)
Q Consensus 134 L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~ 212 (686)
|++++|.+++.+|..+..+++|+.|+|++|+++ +.+|..+ ..+++|+.|+|++|++++.+|..+.++++|+.|
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L----- 499 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF-TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL----- 499 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC-TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE-----
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhh-hcccCCCEEECCCCccccCChhhhhcccCCCEE-----
Confidence 999999999888999999999999999999997 5678666 589999999999999999989999888887765
Q ss_pred ccccCCCCCCCccccc-ccccCCcccccCCCCCCCCC
Q 042348 213 VDLTYNNLSGLIPQNA-ALLSLGPTAFIGNPFLCGPP 248 (686)
Q Consensus 213 l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~c~~p 248 (686)
++++|++++.+|..+ .+.++..+.+.+|++.|.+|
T Consensus 500 -~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 500 -NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp -ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred -eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 999999999888654 46677788899999988644
No 324
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.75 E-value=2.1e-18 Score=198.23 Aligned_cols=165 Identities=22% Similarity=0.211 Sum_probs=146.8
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.+++.|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+.+++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47899999999999988888999999999999999999989999999999999999999999655567999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhc--cccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIAN--LSRLRLLAQRVYVD 214 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~l~~~~~l~ 214 (686)
++|.+++..|..+..+++|++|+|++|++++..|..+ .++++|++|+|++|.+++..|..+.. +++|+. |+
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~------L~ 177 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ-VQLENLQELLLSNNKIQALKSEELDIFANSSLKK------LE 177 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSS-SCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESE------EE
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhh-cccccCCEEEccCCcccccCHHHhhccccccccE------EE
Confidence 9999998778899999999999999999998777666 58999999999999999988887653 355554 49
Q ss_pred ccCCCCCCCccccc
Q 042348 215 LTYNNLSGLIPQNA 228 (686)
Q Consensus 215 l~~N~l~~~~p~~~ 228 (686)
+++|++++..|..+
T Consensus 178 L~~n~l~~~~~~~~ 191 (680)
T 1ziw_A 178 LSSNQIKEFSPGCF 191 (680)
T ss_dssp CTTCCCCCBCTTGG
T ss_pred CCCCcccccChhhh
Confidence 99999998877643
No 325
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.75 E-value=3e-18 Score=178.68 Aligned_cols=152 Identities=20% Similarity=0.297 Sum_probs=81.6
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCC--CCcccccCCCCCCEE
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSG--PVPMQIGKLKYLQVL 134 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L 134 (686)
.+++.|+|++|.++ .+|..+. ++|+.|++++|++++..+..+.++++|+.|+|++|.++. ..+..+..+++|+.|
T Consensus 100 ~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 100 VKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp TTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 45666777777666 3454443 566666666666665555555666666666666666642 445555556566665
Q ss_pred eccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccc
Q 042348 135 DLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVD 214 (686)
Q Consensus 135 ~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~ 214 (686)
++++|.++ .+|..+. ++|++|+|++|++++..|..+ ..+++|+.|+|++|++++..+..+..+++|+.| +
T Consensus 177 ~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L------~ 246 (330)
T 1xku_A 177 RIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASL-KGLNNLAKLGLSFNSISAVDNGSLANTPHLREL------H 246 (330)
T ss_dssp ECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGG-TTCTTCCEEECCSSCCCEECTTTGGGSTTCCEE------E
T ss_pred ECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHh-cCCCCCCEEECCCCcCceeChhhccCCCCCCEE------E
Confidence 55555555 2333322 455555555555554333333 345555555555555555544444444444333 4
Q ss_pred ccCCCCC
Q 042348 215 LTYNNLS 221 (686)
Q Consensus 215 l~~N~l~ 221 (686)
+++|+++
T Consensus 247 L~~N~l~ 253 (330)
T 1xku_A 247 LNNNKLV 253 (330)
T ss_dssp CCSSCCS
T ss_pred CCCCcCc
Confidence 5555544
No 326
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.75 E-value=2.2e-18 Score=196.12 Aligned_cols=175 Identities=20% Similarity=0.222 Sum_probs=144.5
Q ss_pred CCCcceeeeEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcc
Q 042348 44 EDPCSWNGITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPM 123 (686)
Q Consensus 44 ~~~c~w~gv~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 123 (686)
.-|..|....|..... +.+-++.+|+ .+|..+. +++++|||++|+|++..|.+|.++++|++|+|++|+|++..|.
T Consensus 19 ~~p~~~~~c~~~~~~~-~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~ 94 (635)
T 4g8a_A 19 SIPESWEPCVEVVPNI-TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG 94 (635)
T ss_dssp ------CCSEEEETTT-EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCCccccCCCC-EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChh
Confidence 3577898877764433 3577888888 5787664 5799999999999987788999999999999999999987788
Q ss_pred cccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCC-Cchhhhccc
Q 042348 124 QIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL-IPNDIANLS 202 (686)
Q Consensus 124 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~ 202 (686)
.|.+|++|++|+|++|+|++..+..|.++++|++|+|++|++++ +|...+.++++|++|+|++|++++. +|..++.++
T Consensus 95 ~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~-l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~ 173 (635)
T 4g8a_A 95 AYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT 173 (635)
T ss_dssp TTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCT
T ss_pred HhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCC-CChhhhhcCcccCeeccccCccccCCCchhhccch
Confidence 89999999999999999997777889999999999999999996 5554446899999999999999874 688888888
Q ss_pred ccccccccccccccCCCCCCCcccccc
Q 042348 203 RLRLLAQRVYVDLTYNNLSGLIPQNAA 229 (686)
Q Consensus 203 ~L~~l~~~~~l~l~~N~l~~~~p~~~~ 229 (686)
+|+.| ++++|++++..|..+.
T Consensus 174 ~L~~L------~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 174 NLEHL------DLSSNKIQSIYCTDLR 194 (635)
T ss_dssp TCCEE------ECCSSCCCEECGGGGH
T ss_pred hhhhh------cccCcccccccccccc
Confidence 88765 9999999998887653
No 327
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=5.3e-18 Score=161.91 Aligned_cols=131 Identities=21% Similarity=0.252 Sum_probs=115.2
Q ss_pred EEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCc-cccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCC
Q 042348 61 SLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPV-ELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQN 139 (686)
Q Consensus 61 ~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (686)
.|++++|+|+ .+|..+.. +|+.|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4566788885 57776654 899999999999976664 4889999999999999999988999999999999999999
Q ss_pred CCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCc
Q 042348 140 SFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIP 195 (686)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p 195 (686)
++++..|..+..+++|++|+|++|++++.+|..+ ..+++|++|+|++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSF-EHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSS-TTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHh-hcCCCCCEEEeCCCCccCcCc
Confidence 9998888889999999999999999998777766 489999999999999998655
No 328
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.74 E-value=5.9e-18 Score=176.55 Aligned_cols=172 Identities=22% Similarity=0.288 Sum_probs=99.6
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCC--CCCcccccCCCCCCEE
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFS--GPVPMQIGKLKYLQVL 134 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~--g~~p~~~~~l~~L~~L 134 (686)
..++.|+|++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|+.|+|++|.++ +..|..+..+ +|+.|
T Consensus 102 ~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L 177 (332)
T 2ft3_A 102 RKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYL 177 (332)
T ss_dssp TTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCC
T ss_pred CCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEE
Confidence 57788888888887 4666554 77888888888888655566778888888888888885 3566666666 56666
Q ss_pred eccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccc
Q 042348 135 DLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVD 214 (686)
Q Consensus 135 ~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~ 214 (686)
++++|.+++ +|..+. ++|++|+|++|++++..|..+ ..+++|+.|+|++|++++..|..+..+++|+.| +
T Consensus 178 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------~ 247 (332)
T 2ft3_A 178 RISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDL-LRYSKLYRLGLGHNQIRMIENGSLSFLPTLREL------H 247 (332)
T ss_dssp BCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSS-TTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEE------E
T ss_pred ECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHh-cCCCCCCEEECCCCcCCcCChhHhhCCCCCCEE------E
Confidence 666655553 443332 455555555555554333333 345555555555555555544445444444433 4
Q ss_pred ccCCCCCCCcccccccccCCcccccCCC
Q 042348 215 LTYNNLSGLIPQNAALLSLGPTAFIGNP 242 (686)
Q Consensus 215 l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 242 (686)
+++|+++..++....+.++..+.+.+|+
T Consensus 248 L~~N~l~~lp~~l~~l~~L~~L~l~~N~ 275 (332)
T 2ft3_A 248 LDNNKLSRVPAGLPDLKLLQVVYLHTNN 275 (332)
T ss_dssp CCSSCCCBCCTTGGGCTTCCEEECCSSC
T ss_pred CCCCcCeecChhhhcCccCCEEECCCCC
Confidence 5555554322222233334444444443
No 329
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.74 E-value=7e-18 Score=173.86 Aligned_cols=170 Identities=22% Similarity=0.330 Sum_probs=122.3
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
..+++.|+|++|.+++..+ +..+++|+.|+|++|++++ +| .+.++++|+.|+|++|++++ ++. +..+++|+.|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 3567888888888876444 7888888888888888874 33 57788888888888888875 443 77888888888
Q ss_pred ccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccc
Q 042348 136 LSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDL 215 (686)
Q Consensus 136 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l 215 (686)
|++|.+++. +. +..+++|+.|+|++|++++ ++. + ..+++|+.|+|++|++++..+ +..+++|+ .|++
T Consensus 136 l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~~-l-~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~------~L~L 202 (308)
T 1h6u_A 136 LDLNQITNI-SP-LAGLTNLQYLSIGNAQVSD-LTP-L-ANLSKLTTLKADDNKISDISP--LASLPNLI------EVHL 202 (308)
T ss_dssp CCSSCCCCC-GG-GGGCTTCCEEECCSSCCCC-CGG-G-TTCTTCCEEECCSSCCCCCGG--GGGCTTCC------EEEC
T ss_pred CCCCccCcC-cc-ccCCCCccEEEccCCcCCC-Chh-h-cCCCCCCEEECCCCccCcChh--hcCCCCCC------EEEc
Confidence 888888754 33 7778888888888888874 444 3 478888888888888886543 55555554 4488
Q ss_pred cCCCCCCCcccccccccCCcccccCCCCCC
Q 042348 216 TYNNLSGLIPQNAALLSLGPTAFIGNPFLC 245 (686)
Q Consensus 216 ~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c 245 (686)
++|++++..| ...+.++..+.+.+|++.+
T Consensus 203 ~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 203 KNNQISDVSP-LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp TTSCCCBCGG-GTTCTTCCEEEEEEEEEEC
T ss_pred cCCccCcccc-ccCCCCCCEEEccCCeeec
Confidence 8888887664 4445566666777777643
No 330
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=5.3e-18 Score=162.70 Aligned_cols=152 Identities=18% Similarity=0.260 Sum_probs=129.0
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.+++.|++++|.++ .+| .+..+++|+.|+|++|.++ .+..+.++++|++|+|++|++++..|..++.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 46889999999999 566 6999999999999999775 3457899999999999999999888999999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|.+++..|..+..+++|++|+|++|++.+.+| .+ ..+++|+.|+|++|++++.. .+..+++|+.| +++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l-~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L------~l~ 189 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PL-KTLPELKSLNIQFDGVHDYR--GIEDFPKLNQL------YAF 189 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GG-GGCSSCCEEECTTBCCCCCT--TGGGCSSCCEE------EEC
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hh-cCCCCCCEEECCCCCCcChH--HhccCCCCCEE------Eee
Confidence 9999998889999999999999999998334676 34 58999999999999999743 56666666654 999
Q ss_pred CCCCCC
Q 042348 217 YNNLSG 222 (686)
Q Consensus 217 ~N~l~~ 222 (686)
+|++.+
T Consensus 190 ~N~i~~ 195 (197)
T 4ezg_A 190 SQTIGG 195 (197)
T ss_dssp BC----
T ss_pred CcccCC
Confidence 999864
No 331
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=7.5e-18 Score=160.88 Aligned_cols=127 Identities=22% Similarity=0.329 Sum_probs=116.4
Q ss_pred cceeeeEecC-----------CCEEEEEeCCCCccccCCc-CcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccC
Q 042348 47 CSWNGITCRE-----------GQVFSLIIPNKKLTGFIPA-DLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSG 114 (686)
Q Consensus 47 c~w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~-~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 114 (686)
|.|..+.|.. ..++.|+|++|+|++..+. .|+.+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 6799999973 3788999999999987765 489999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhh
Q 042348 115 NSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGF 173 (686)
Q Consensus 115 N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 173 (686)
|+|++..|..|..+++|++|+|++|++++.+|..+..+++|++|+|++|.+++..+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~ 146 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 146 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchH
Confidence 99998888889999999999999999999999999999999999999999998766443
No 332
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.72 E-value=1.5e-17 Score=169.82 Aligned_cols=169 Identities=27% Similarity=0.406 Sum_probs=138.1
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.+++.|++++|.++.. + .+..+++|+.|+|++|++++..| +.++++|+.|+|++|++++ +| .+..+++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 4688999999999864 3 48899999999999999986444 8999999999999999985 44 4899999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|++++ + ..+..+++|+.|+|++|++++ + ..+ ..+++|+.|+|++|++++..| +..+++|+.| +++
T Consensus 120 ~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l-~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L------~L~ 186 (291)
T 1h6t_A 120 EHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVL-SRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL------YLS 186 (291)
T ss_dssp TTSCCCC-C-GGGGGCTTCCEEECCSSCCCC-C-GGG-GGCTTCSEEECCSSCCCCCGG--GTTCTTCCEE------ECC
T ss_pred CCCcCCC-C-hhhcCCCCCCEEEccCCcCCc-c-hhh-ccCCCCCEEEccCCccccchh--hcCCCccCEE------ECC
Confidence 9999986 4 468899999999999999986 4 344 589999999999999998755 6676666654 999
Q ss_pred CCCCCCCcccccccccCCcccccCCCCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNPFLC 245 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~~~c 245 (686)
+|++++. |....+.++..+.+.+|+..+
T Consensus 187 ~N~i~~l-~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 187 KNHISDL-RALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SSCCCBC-GGGTTCTTCSEEEEEEEEEEC
T ss_pred CCcCCCC-hhhccCCCCCEEECcCCcccC
Confidence 9999875 445556667777788887543
No 333
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.72 E-value=1e-17 Score=176.39 Aligned_cols=180 Identities=23% Similarity=0.287 Sum_probs=148.4
Q ss_pred eeEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCC
Q 042348 51 GITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKY 130 (686)
Q Consensus 51 gv~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 130 (686)
...|....+ .++++|+++. +|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+++
T Consensus 27 ~~~C~~~~~--c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 101 (353)
T 2z80_A 27 SLSCDRNGI--CKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGS 101 (353)
T ss_dssp CCEECTTSE--EECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CCCCCCCeE--eeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCC
Confidence 567876554 8999999995 677665 58999999999999777778999999999999999999888889999999
Q ss_pred CCEEeccCCCCCCCCChhhhhccccccccccccccCCCCch-hhhhcCcccceeccccc-ccCCCCchhhhccccccccc
Q 042348 131 LQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPD-GFATNLTALQKLDLSFN-NLSGLIPNDIANLSRLRLLA 208 (686)
Q Consensus 131 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~l~ 208 (686)
|++|+|++|++++..+..+..+++|++|+|++|+++ .+|. ..+..+++|++|+|++| .+++..|..+.++++|+.|
T Consensus 102 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L- 179 (353)
T 2z80_A 102 LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL- 179 (353)
T ss_dssp CCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE-
T ss_pred CCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE-
Confidence 999999999999655555899999999999999999 5666 44468999999999999 5787778888888888765
Q ss_pred ccccccccCCCCCCCcccccc-cccCCcccccCCC
Q 042348 209 QRVYVDLTYNNLSGLIPQNAA-LLSLGPTAFIGNP 242 (686)
Q Consensus 209 ~~~~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~ 242 (686)
++++|++++..|..+. +.++..+.+.+|.
T Consensus 180 -----~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 180 -----EIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp -----EEEETTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred -----ECCCCCcCccCHHHHhccccCCeecCCCCc
Confidence 8999999887665543 3334444455543
No 334
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.71 E-value=1.1e-17 Score=185.75 Aligned_cols=160 Identities=24% Similarity=0.258 Sum_probs=141.9
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcc--cCCccccCCCCCcEEEccCCCCCCCCccc-ccCCCCCC
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSG--SLPVELFNASNLQSLILSGNSFSGPVPMQ-IGKLKYLQ 132 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~ 132 (686)
...++.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+.++++|++|+|++|.+++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3578999999999999999999999999999999999996 56788999999999999999999867765 88899999
Q ss_pred EEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccc
Q 042348 133 VLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVY 212 (686)
Q Consensus 133 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~ 212 (686)
.|+|++|.+++.+|..+. ++|+.|+|++|+++ .+|..++ .+++|++|+|++|+|++..+..+..+++|+.|
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L----- 473 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV-KLEALQELNVASNQLKSVPDGIFDRLTSLQKI----- 473 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG-GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE-----
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh-cCCCCCEEECCCCcCCccCHHHhccCCcccEE-----
Confidence 999999999988877654 79999999999999 7998886 89999999999999996544447777777655
Q ss_pred ccccCCCCCCCcc
Q 042348 213 VDLTYNNLSGLIP 225 (686)
Q Consensus 213 l~l~~N~l~~~~p 225 (686)
++++|.+++..+
T Consensus 474 -~l~~N~~~c~c~ 485 (520)
T 2z7x_B 474 -WLHTNPWDCSCP 485 (520)
T ss_dssp -ECCSSCBCCCHH
T ss_pred -ECcCCCCcccCC
Confidence 999999998755
No 335
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.71 E-value=1.5e-17 Score=186.45 Aligned_cols=161 Identities=21% Similarity=0.246 Sum_probs=140.6
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcc--cCCccccCCCCCcEEEccCCCCCCCCcc-cccCCCCCC
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSG--SLPVELFNASNLQSLILSGNSFSGPVPM-QIGKLKYLQ 132 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~ 132 (686)
...++.|+|++|.+++.+|..++.+++|+.|+|++|++++ .+|..+.++++|+.|+|++|++++.+|. .+..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4679999999999999999999999999999999999996 3456789999999999999999985665 488999999
Q ss_pred EEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccc
Q 042348 133 VLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVY 212 (686)
Q Consensus 133 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~ 212 (686)
.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..++ .+++|+.|+|++|+|++..+..+..+++|+.|
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L----- 502 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT-HLQALQELNVASNQLKSVPDGVFDRLTSLQYI----- 502 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT-SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCE-----
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc-CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEE-----
Confidence 999999999987776554 78999999999999 7998886 89999999999999996544447777777654
Q ss_pred ccccCCCCCCCccc
Q 042348 213 VDLTYNNLSGLIPQ 226 (686)
Q Consensus 213 l~l~~N~l~~~~p~ 226 (686)
++++|.+++..|.
T Consensus 503 -~l~~N~~~c~c~~ 515 (562)
T 3a79_B 503 -WLHDNPWDCTCPG 515 (562)
T ss_dssp -ECCSCCBCCCHHH
T ss_pred -EecCCCcCCCcch
Confidence 9999999987663
No 336
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=4.6e-17 Score=153.24 Aligned_cols=135 Identities=29% Similarity=0.369 Sum_probs=113.1
Q ss_pred cceeeeEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCccccc
Q 042348 47 CSWNGITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIG 126 (686)
Q Consensus 47 c~w~gv~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 126 (686)
|+|.+|.|. +|+++. +|..+ .++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|.
T Consensus 7 C~~~~l~~~----------~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 73 (177)
T 2o6r_A 7 CSGTEIRCN----------SKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFD 73 (177)
T ss_dssp EETTEEECC----------SSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTT
T ss_pred eCCCEEEec----------CCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHcc
Confidence 678887775 455653 55444 36899999999999977777789999999999999999977777789
Q ss_pred CCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCc
Q 042348 127 KLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIP 195 (686)
Q Consensus 127 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p 195 (686)
.+++|+.|+|++|++++..+..+..+++|+.|+|++|++++ +|...+..+++|++|+|++|.+++..|
T Consensus 74 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 74 KLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceE-eCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999999999999998777778899999999999999984 666655679999999999999998654
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.70 E-value=6.2e-17 Score=166.76 Aligned_cols=169 Identities=27% Similarity=0.375 Sum_probs=142.2
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.+++.|++++|.++. +| .+..+++|+.|+|++|.+++ +|. +.++++|++|+|++|++++ ++ .+..+++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 578999999999986 45 68999999999999999985 444 9999999999999999985 44 6999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|.+++ +|. +..+++|++|+|++|++++ ++. + ..+++|+.|+|++|++++..+ +..+++|+.| +++
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l-~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L------~l~ 181 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-L-AGLTNLQYLSIGNAQVSDLTP--LANLSKLTTL------KAD 181 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-G-GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE------ECC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-c-cCCCCccEEEccCCcCCCChh--hcCCCCCCEE------ECC
Confidence 9999996 554 8999999999999999995 444 4 589999999999999998644 7777766654 999
Q ss_pred CCCCCCCcccccccccCCcccccCCCCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNPFLC 245 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~~~c 245 (686)
+|++++..+ ...+.++..+.+.+|....
T Consensus 182 ~n~l~~~~~-l~~l~~L~~L~L~~N~l~~ 209 (308)
T 1h6u_A 182 DNKISDISP-LASLPNLIEVHLKNNQISD 209 (308)
T ss_dssp SSCCCCCGG-GGGCTTCCEEECTTSCCCB
T ss_pred CCccCcChh-hcCCCCCCEEEccCCccCc
Confidence 999998765 4556667777788886543
No 338
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.70 E-value=3.3e-17 Score=178.48 Aligned_cols=178 Identities=21% Similarity=0.286 Sum_probs=137.8
Q ss_pred EecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCC
Q 042348 53 TCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQ 132 (686)
Q Consensus 53 ~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 132 (686)
.|.. ....++.++++|+. +|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..|.++++|+
T Consensus 51 ~C~~-~~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 126 (452)
T 3zyi_A 51 SCSN-QFSKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLN 126 (452)
T ss_dssp EECS-SSCEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred EECC-CCcEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCC
Confidence 4753 34568889999984 777665 6899999999999998899999999999999999999988889999999999
Q ss_pred EEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccc-cccCCCCchhhhcccccccccccc
Q 042348 133 VLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSF-NNLSGLIPNDIANLSRLRLLAQRV 211 (686)
Q Consensus 133 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~l~~~~ 211 (686)
+|+|++|++++..+..+..+++|++|+|++|+++ .+|...+.++++|+.|+|++ |.+....+..+.++++|+.|
T Consensus 127 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L---- 201 (452)
T 3zyi_A 127 TLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL---- 201 (452)
T ss_dssp EEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE----
T ss_pred EEECCCCcCCccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE----
Confidence 9999999999777777999999999999999998 45555556888888888888 45554444457776666544
Q ss_pred cccccCCCCCCCcccccccccCCcccccCCC
Q 042348 212 YVDLTYNNLSGLIPQNAALLSLGPTAFIGNP 242 (686)
Q Consensus 212 ~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 242 (686)
+|++|++++. |....+.++..+.+.+|.
T Consensus 202 --~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~ 229 (452)
T 3zyi_A 202 --NLGMCNIKDM-PNLTPLVGLEELEMSGNH 229 (452)
T ss_dssp --ECTTSCCSSC-CCCTTCTTCCEEECTTSC
T ss_pred --ECCCCccccc-ccccccccccEEECcCCc
Confidence 5666666543 333333344444444443
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.70 E-value=8.4e-18 Score=173.56 Aligned_cols=177 Identities=22% Similarity=0.230 Sum_probs=144.8
Q ss_pred CCCEEEEEeCCCCccccCC----cCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCC--Cc--ccccC
Q 042348 56 EGQVFSLIIPNKKLTGFIP----ADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGP--VP--MQIGK 127 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p----~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~--~p--~~~~~ 127 (686)
...++.|+|++|.+++..+ ..+..+++|++|+|++|++.+..|..+.++++|++|+|++|++.+. ++ ..++.
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 3578999999999998766 4566899999999999999988889999999999999999998753 32 33478
Q ss_pred CCCCCEEeccCCCCCCCCCh----hhhhccccccccccccccCCCCchhhhhcC---cccceecccccccCCCCchhhhc
Q 042348 128 LKYLQVLDLSQNSFSSSIPS----SIVQCKRLKTVVLNQNSFTGPLPDGFATNL---TALQKLDLSFNNLSGLIPNDIAN 200 (686)
Q Consensus 128 l~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~ 200 (686)
+++|++|+|++|+++ .+|. .+..+++|++|+|++|++++.+|..+. .+ ++|++|+|++|+|+ .+|..+.
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~~~~~L~~L~Ls~N~l~-~lp~~~~- 271 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAP-RCMWSSALNSLNLSFAGLE-QVPKGLP- 271 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCS-SCCCCTTCCCEECCSSCCC-SCCSCCC-
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHH-hccCcCcCCEEECCCCCCC-chhhhhc-
Confidence 999999999999998 3444 357889999999999999987787664 44 79999999999999 5566553
Q ss_pred ccccccccccccccccCCCCCCCcccccccccCCcccccCCCCC
Q 042348 201 LSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 201 l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
++|+ .|||++|++++. |....+.++..+.+.+|++.
T Consensus 272 -~~L~------~L~Ls~N~l~~~-~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 272 -AKLR------VLDLSSNRLNRA-PQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp -SCCS------CEECCSCCCCSC-CCTTSCCCCSCEECSSTTTS
T ss_pred -CCCC------EEECCCCcCCCC-chhhhCCCccEEECcCCCCC
Confidence 4554 459999999985 33445567778888999874
No 340
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=5e-17 Score=151.58 Aligned_cols=132 Identities=21% Similarity=0.202 Sum_probs=79.1
Q ss_pred CCCCEEEccCCCCc-ccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhcccccccc
Q 042348 81 SAIGRVNLRNNNFS-GSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVV 159 (686)
Q Consensus 81 ~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 159 (686)
++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55666666666665 55666566666666666666666643 5566666666666666666655666665666666666
Q ss_pred ccccccCCCCc--hhhhhcCcccceecccccccCCCCc---hhhhcccccccccccccccccCCCCCC
Q 042348 160 LNQNSFTGPLP--DGFATNLTALQKLDLSFNNLSGLIP---NDIANLSRLRLLAQRVYVDLTYNNLSG 222 (686)
Q Consensus 160 L~~N~l~~~~p--~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~l~~~~~l~l~~N~l~~ 222 (686)
|++|++++ +| ..+ ..+++|++|+|++|.+++..+ ..+..+++|+.| |+++|.+..
T Consensus 102 Ls~N~l~~-~~~~~~l-~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L------~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPL-KKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL------DGYDREDQE 161 (168)
T ss_dssp CBSSSCCS-SGGGGGG-SSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEE------TTEETTSCB
T ss_pred ccCCccCc-chhHHHH-hcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEe------cCCCCChhh
Confidence 66666663 32 233 456666666666666665544 345555554433 666666554
No 341
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.69 E-value=3.5e-17 Score=177.64 Aligned_cols=157 Identities=24% Similarity=0.268 Sum_probs=106.9
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEcc-----------------------
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILS----------------------- 113 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~----------------------- 113 (686)
..++.|+|++|+|++..+..|..+++|+.|+|++|.|++..+..|.++++|+.|+|+
T Consensus 112 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 191 (440)
T 3zyj_A 112 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN 191 (440)
T ss_dssp SSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEE
T ss_pred ccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeec
Confidence 578889999999987777778888889999998888875555455555555555554
Q ss_pred --CCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccC
Q 042348 114 --GNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLS 191 (686)
Q Consensus 114 --~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 191 (686)
+|+++ .+| .+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+ .++++|+.|||++|+|+
T Consensus 192 L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 192 LAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAF-DNLQSLVEINLAHNNLT 268 (440)
T ss_dssp CTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSS-TTCTTCCEEECTTSCCC
T ss_pred CCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhh-cCCCCCCEEECCCCCCC
Confidence 44444 333 24555666666666666666556666667777777777777765444443 46777777777777777
Q ss_pred CCCchhhhcccccccccccccccccCCCCCC
Q 042348 192 GLIPNDIANLSRLRLLAQRVYVDLTYNNLSG 222 (686)
Q Consensus 192 ~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~ 222 (686)
+..+..+..+++|+. |+|++|.+.-
T Consensus 269 ~~~~~~~~~l~~L~~------L~L~~Np~~C 293 (440)
T 3zyj_A 269 LLPHDLFTPLHHLER------IHLHHNPWNC 293 (440)
T ss_dssp CCCTTTTSSCTTCCE------EECCSSCEEC
T ss_pred ccChhHhccccCCCE------EEcCCCCccC
Confidence 766666666666554 5999998864
No 342
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.69 E-value=3.5e-18 Score=187.50 Aligned_cols=174 Identities=20% Similarity=0.206 Sum_probs=147.9
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
...++.|+|++|.|++..+ .++|+.|+|++|.|++..+. .+++|+.|+|++|.+++..|..++.+++|+.|+
T Consensus 79 l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 150 (487)
T 3oja_A 79 LSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150 (487)
T ss_dssp CTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEE
T ss_pred CCCCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEE
Confidence 4689999999999997543 38999999999999976654 468899999999999998899999999999999
Q ss_pred ccCCCCCCCCChhhh-hccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccc
Q 042348 136 LSQNSFSSSIPSSIV-QCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVD 214 (686)
Q Consensus 136 ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~ 214 (686)
|++|.+++.+|..+. .+++|+.|+|++|.|++. |... .+++|+.|+|++|.|++.+|. +..+++|+.| |
T Consensus 151 Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~--~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L------~ 220 (487)
T 3oja_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQV--VFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWI------S 220 (487)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCC--CCTTCCEEECCSSCCCEECGG-GGGGTTCSEE------E
T ss_pred CCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccc--cCCCCCEEECCCCCCCCCCHh-HcCCCCccEE------E
Confidence 999999998888886 799999999999999964 4432 689999999999999986554 7777777655 9
Q ss_pred ccCCCCCCCcccccccccCCcccccCCCCCCCC
Q 042348 215 LTYNNLSGLIPQNAALLSLGPTAFIGNPFLCGP 247 (686)
Q Consensus 215 l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 247 (686)
|++|+|++.++....+.++..+.+.+|++.|+.
T Consensus 221 Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 221 LRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp CTTSCCCEECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred ecCCcCcccchhhccCCCCCEEEcCCCCCcCcc
Confidence 999999986555445667788889999999864
No 343
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.69 E-value=3.2e-17 Score=183.30 Aligned_cols=164 Identities=27% Similarity=0.249 Sum_probs=141.6
Q ss_pred EecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCC
Q 042348 53 TCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQ 132 (686)
Q Consensus 53 ~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 132 (686)
.|....+ .++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+.+++|+
T Consensus 3 ~C~~~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 77 (549)
T 2z81_A 3 SCDASGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLE 77 (549)
T ss_dssp EECTTSE--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cCCCCce--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCC
Confidence 5765555 789999999 5777665 7999999999999988899999999999999999999988889999999999
Q ss_pred EEeccCCCCCCCCChhhhhccccccccccccccCC-CCchhhhhcCcccceecccccccCCCC-chhhhccccccccccc
Q 042348 133 VLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG-PLPDGFATNLTALQKLDLSFNNLSGLI-PNDIANLSRLRLLAQR 210 (686)
Q Consensus 133 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~l~~~ 210 (686)
+|+|++|.+++..|..+..+++|++|+|++|++++ .+|..+ .++++|++|+|++|++.+.+ +..+.++++|+.|
T Consensus 78 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L--- 153 (549)
T 2z81_A 78 HLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF-PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNEL--- 153 (549)
T ss_dssp EEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSC-TTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE---
T ss_pred EEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhh-hccCCccEEECCCCccccccCHhhhhcccccCee---
Confidence 99999999998777789999999999999999986 345555 58999999999999955444 4678888887765
Q ss_pred ccccccCCCCCCCccccc
Q 042348 211 VYVDLTYNNLSGLIPQNA 228 (686)
Q Consensus 211 ~~l~l~~N~l~~~~p~~~ 228 (686)
++++|++++.+|...
T Consensus 154 ---~L~~n~l~~~~~~~l 168 (549)
T 2z81_A 154 ---EIKALSLRNYQSQSL 168 (549)
T ss_dssp ---EEEETTCCEECTTTT
T ss_pred ---eccCCcccccChhhh
Confidence 899999998777553
No 344
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=4.2e-17 Score=152.09 Aligned_cols=134 Identities=25% Similarity=0.190 Sum_probs=120.2
Q ss_pred CCEEEEEeCCCCcc-ccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 57 GQVFSLIIPNKKLT-GFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 57 ~~~~~l~l~~n~l~-g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
..++.|+|++|+++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57899999999999 88999999999999999999999965 7899999999999999999988898888899999999
Q ss_pred ccCCCCCCCC-ChhhhhccccccccccccccCCCCch---hhhhcCcccceecccccccCCC
Q 042348 136 LSQNSFSSSI-PSSIVQCKRLKTVVLNQNSFTGPLPD---GFATNLTALQKLDLSFNNLSGL 193 (686)
Q Consensus 136 ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~---~~~~~l~~L~~L~Ls~N~l~~~ 193 (686)
|++|.+++.. +..+..+++|+.|+|++|++++ +|. ..+..+++|++||+++|.+...
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTN-LNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGT-STTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcc-hHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 9999999642 2788999999999999999996 444 3446899999999999999854
No 345
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.68 E-value=6.6e-17 Score=181.02 Aligned_cols=125 Identities=30% Similarity=0.421 Sum_probs=60.8
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|+|++..| +..|++|+.|+|++|+|++ +| .+.++++|+.|+|++|.|++ + +.+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 344555555555554333 4555555555555555542 22 34555555555555555543 2 23445555555555
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCC
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSG 192 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 192 (686)
++|.+++. ..+..+++|+.|+|++|+|++..| + ..+++|+.|+|++|+|++
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l-~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L-AGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--G-TTCTTCCEEECCSSCCCB
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh--h-ccCCCCCEEECcCCCCCC
Confidence 55555532 344455555555555555553322 2 345555555555555554
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.67 E-value=8.7e-17 Score=168.89 Aligned_cols=171 Identities=20% Similarity=0.225 Sum_probs=118.4
Q ss_pred cceeeeEecC-----------CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCc-cccCCCCCcE-EEcc
Q 042348 47 CSWNGITCRE-----------GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPV-ELFNASNLQS-LILS 113 (686)
Q Consensus 47 c~w~gv~c~~-----------~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~-L~L~ 113 (686)
|+|..|.|+. ..++.|+|++|+|+...+..|.+|++|++|+|++|++.+.+|. .|.++++|+. +.++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 6899999973 3578999999999976667899999999999999999777764 5788988765 6778
Q ss_pred CCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhcccccc--------------------------ccccccccCC
Q 042348 114 GNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKT--------------------------VVLNQNSFTG 167 (686)
Q Consensus 114 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~--------------------------L~L~~N~l~~ 167 (686)
+|+++...|..|..+++|++|++++|++++..+..+....++.. |+|++|+|+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 89999777889999999999999999998665544444444444 445555554
Q ss_pred CCchhhhhcCcccceecccc-cccCCCCchhhhcccccccccccccccccCCCCCCCcc
Q 042348 168 PLPDGFATNLTALQKLDLSF-NNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIP 225 (686)
Q Consensus 168 ~~p~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p 225 (686)
.+|...+ ...+|+.|++++ |.++.+.++.|.++++|+.| ||++|+|+..++
T Consensus 168 ~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~L------dLs~N~l~~lp~ 219 (350)
T 4ay9_X 168 EIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVIL------DISRTRIHSLPS 219 (350)
T ss_dssp EECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEE------ECTTSCCCCCCS
T ss_pred CCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchh------hcCCCCcCccCh
Confidence 2333332 334455555543 33433333344444444433 666666665444
No 347
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=6.1e-17 Score=147.74 Aligned_cols=124 Identities=23% Similarity=0.251 Sum_probs=70.3
Q ss_pred CCCCEEEccCCCCc-ccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhcccccccc
Q 042348 81 SAIGRVNLRNNNFS-GSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVV 159 (686)
Q Consensus 81 ~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 159 (686)
++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555666666665 55555555666666666666666543 4555566666666666666655555555566666666
Q ss_pred ccccccCCC-CchhhhhcCcccceecccccccCCCCc---hhhhcccccccc
Q 042348 160 LNQNSFTGP-LPDGFATNLTALQKLDLSFNNLSGLIP---NDIANLSRLRLL 207 (686)
Q Consensus 160 L~~N~l~~~-~p~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~l 207 (686)
|++|++++. .+..+ ..+++|++|+|++|.+++..+ ..+..+++|+.|
T Consensus 95 ls~N~i~~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 145 (149)
T 2je0_A 95 LSGNKIKDLSTIEPL-KKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYL 145 (149)
T ss_dssp CTTSCCCSHHHHGGG-GGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEE
T ss_pred CCCCcCCChHHHHHH-hhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccc
Confidence 666666531 11333 356666666666666665544 345555555443
No 348
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.67 E-value=1.8e-16 Score=166.27 Aligned_cols=168 Identities=22% Similarity=0.332 Sum_probs=81.3
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCc---------------------cccCCCCCcEEEccCCC
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPV---------------------ELFNASNLQSLILSGNS 116 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~---------------------~~~~l~~L~~L~L~~N~ 116 (686)
.++.|++++|.+.+..+ +..+++|+.|++++|.+.+ ++. .+..+++|+.|+|++|.
T Consensus 156 ~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 156 GLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNK 232 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSC
T ss_pred CCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-cccccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCc
Confidence 45555555555554332 5555555555555555542 222 04444555555555555
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCch
Q 042348 117 FSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPN 196 (686)
Q Consensus 117 l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~ 196 (686)
+++. +. +..+++|+.|++++|.+++ + ..+..+++|+.|+|++|++++ ++ .+ ..+++|+.|+|++|++++..|.
T Consensus 233 l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~-~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 233 ITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VL-NNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GG-GGCTTCSEEECCSSCCCGGGHH
T ss_pred cCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hh-cCCCCCCEEECcCCcCCCcChh
Confidence 5422 22 4555555555555555543 2 234455555555555555553 22 12 3455555555555555555555
Q ss_pred hhhcccccccccccccccccCCCCCCCcccccccccCCcccccCCC
Q 042348 197 DIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPTAFIGNP 242 (686)
Q Consensus 197 ~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 242 (686)
.+..+++|+.| ++++|++++.+| ...+.++..+.+.+|+
T Consensus 306 ~l~~l~~L~~L------~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 306 VIGGLTNLTTL------FLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp HHHTCTTCSEE------ECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred HhhccccCCEE------EccCCccccccC-hhhhhccceeehhhhc
Confidence 55555444433 555555555544 3334444444444443
No 349
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=1e-16 Score=146.23 Aligned_cols=129 Identities=21% Similarity=0.183 Sum_probs=115.1
Q ss_pred CCEEEEEeCCCCcc-ccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 57 GQVFSLIIPNKKLT-GFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 57 ~~~~~l~l~~n~l~-g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
.+++.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+.++++|++|+|++|.+++.+|..++.+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56889999999999 88999999999999999999999965 7889999999999999999988999888999999999
Q ss_pred ccCCCCCCC-CChhhhhccccccccccccccCCCCc--hhhhhcCcccceecccc
Q 042348 136 LSQNSFSSS-IPSSIVQCKRLKTVVLNQNSFTGPLP--DGFATNLTALQKLDLSF 187 (686)
Q Consensus 136 ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~~l~~L~~L~Ls~ 187 (686)
+++|.+++. .|..+..+++|++|+|++|++++..+ ...+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999963 34789999999999999999996444 14446899999999974
No 350
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=1.9e-16 Score=151.18 Aligned_cols=127 Identities=27% Similarity=0.347 Sum_probs=109.7
Q ss_pred EEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCC
Q 042348 61 SLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNS 140 (686)
Q Consensus 61 ~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 140 (686)
.+++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4666788887 4676654 68999999999998 788899999999999999999998888889999999999999999
Q ss_pred CCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCC
Q 042348 141 FSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSG 192 (686)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 192 (686)
+++..|..|..+++|+.|+|++|+|+ .+|...+..+++|+.|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeec
Confidence 99888888999999999999999998 4666555688999999999998875
No 351
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.67 E-value=1.7e-16 Score=161.96 Aligned_cols=150 Identities=28% Similarity=0.350 Sum_probs=128.7
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
..+++.|+|++|++++..+ +..+++|+.|+|++|++++ +| .+.++++|+.|+|++|++++ + ..+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 3689999999999998655 9999999999999999985 44 48999999999999999986 4 4689999999999
Q ss_pred ccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccc
Q 042348 136 LSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDL 215 (686)
Q Consensus 136 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l 215 (686)
|++|.+++. ..+..+++|+.|+|++|++++. +. + ..+++|+.|+|++|.+++. | .+..+++|+ .|++
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~-~~-l-~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~------~L~l 207 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDI-VP-L-AGLTKLQNLYLSKNHISDL-R-ALAGLKNLD------VLEL 207 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GG-G-TTCTTCCEEECCSSCCCBC-G-GGTTCTTCS------EEEE
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccc-hh-h-cCCCccCEEECCCCcCCCC-h-hhccCCCCC------EEEC
Confidence 999999964 6789999999999999999964 44 4 5899999999999999974 4 366666665 4599
Q ss_pred cCCCCCCCc
Q 042348 216 TYNNLSGLI 224 (686)
Q Consensus 216 ~~N~l~~~~ 224 (686)
++|+++...
T Consensus 208 ~~n~i~~~~ 216 (291)
T 1h6t_A 208 FSQECLNKP 216 (291)
T ss_dssp EEEEEECCC
T ss_pred cCCcccCCc
Confidence 999998643
No 352
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.66 E-value=2.2e-16 Score=172.74 Aligned_cols=136 Identities=30% Similarity=0.480 Sum_probs=77.7
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|++++|.+++..| ++.+++|+.|+|++|++++ + ..+..+++|+.|+|++|.+++..| +..+++|+.|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 272 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEEC
Confidence 456667777777666544 5556666666666666653 2 245566666666666666664433 556666666666
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLR 205 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 205 (686)
++|.+++..| +..+++|+.|+|++|++++. +. + ..+++|+.|+|++|++++..| +..+++|+
T Consensus 273 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~-~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 334 (466)
T 1o6v_A 273 GANQISNISP--LAGLTALTNLELNENQLEDI-SP-I-SNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCSCC-GG-G-GGCTTCSEEECCSSCCSCCGG--GGGCTTCC
T ss_pred CCCccCcccc--ccCCCccCeEEcCCCcccCc-hh-h-cCCCCCCEEECcCCcCCCchh--hccCccCC
Confidence 6666664322 55566666666666666542 22 2 355666666666666665544 34444443
No 353
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.66 E-value=1.2e-16 Score=153.28 Aligned_cols=154 Identities=15% Similarity=0.215 Sum_probs=128.2
Q ss_pred cCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccc
Q 042348 77 LGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLK 156 (686)
Q Consensus 77 l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 156 (686)
.+.+++|+.|++++|.++ .+| .+..+++|++|+|++|.++ . +..+..+++|++|++++|.+++..|..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 367789999999999998 777 6899999999999999876 3 34799999999999999999988889999999999
Q ss_pred cccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCcccccccccCCcc
Q 042348 157 TVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQNAALLSLGPT 236 (686)
Q Consensus 157 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~~~~~~~~~~ 236 (686)
+|+|++|++++..|..+ ..+++|++|+|++|.+.+.+| .+..+++|+.| ++++|++++.. ....+.++..+
T Consensus 116 ~L~Ls~n~i~~~~~~~l-~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L------~l~~n~i~~~~-~l~~l~~L~~L 186 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKI-NTLPKVNSIDLSYNGAITDIM-PLKTLPELKSL------NIQFDGVHDYR-GIEDFPKLNQL 186 (197)
T ss_dssp EEECCSSBCBGGGHHHH-TTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEE------ECTTBCCCCCT-TGGGCSSCCEE
T ss_pred EEEecCCccCcHhHHHH-hhCCCCCEEEccCCCCccccH-hhcCCCCCCEE------ECCCCCCcChH-HhccCCCCCEE
Confidence 99999999997777777 589999999999998333455 57777766654 99999999853 45556677777
Q ss_pred cccCCCC
Q 042348 237 AFIGNPF 243 (686)
Q Consensus 237 ~~~~n~~ 243 (686)
.+.+|+.
T Consensus 187 ~l~~N~i 193 (197)
T 4ezg_A 187 YAFSQTI 193 (197)
T ss_dssp EECBC--
T ss_pred EeeCccc
Confidence 7888864
No 354
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.66 E-value=7.7e-17 Score=161.93 Aligned_cols=147 Identities=18% Similarity=0.268 Sum_probs=107.9
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.+++.|++++|+++. +| .+..+++|+.|+|++|+|++. |. +.++++|+.|+|++|++++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 567788888888875 44 677888888888888888754 33 7888888888888888874 44332 2 78888888
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|.+++ +| .+..+++|+.|+|++|++++ ++ .+ ..+++|+.|+|++|++++. ..+..+++|+ .|+++
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l-~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~------~L~l~ 180 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-ML-GFLSKLEVLDLHGNEITNT--GGLTRLKKVN------WIDLT 180 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GG-GGCTTCCEEECTTSCCCBC--TTSTTCCCCC------EEEEE
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HH-ccCCCCCEEECCCCcCcch--HHhccCCCCC------EEeCC
Confidence 8888875 33 57788888888888888874 44 33 4788888888888888876 4455555554 44888
Q ss_pred CCCCCCC
Q 042348 217 YNNLSGL 223 (686)
Q Consensus 217 ~N~l~~~ 223 (686)
+|.+++.
T Consensus 181 ~N~~~~~ 187 (263)
T 1xeu_A 181 GQKCVNE 187 (263)
T ss_dssp EEEEECC
T ss_pred CCcccCC
Confidence 8887765
No 355
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.66 E-value=2e-17 Score=171.33 Aligned_cols=170 Identities=22% Similarity=0.213 Sum_probs=141.0
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
.+++.|+|++|++++..|..|..+++|+.|+|++|++++..| +..+++|++|+|++|++++ +| .+++|++|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-EE----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-cc----CCCCcCEEEC
Confidence 478999999999999888899999999999999999987655 8999999999999999984 33 3489999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhh-cccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIA-NLSRLRLLAQRVYVDL 215 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~l~~~~~l~l 215 (686)
++|++++..+. .+++|+.|+|++|++++..|..+ ..+++|++|+|++|.+++..|..+. .+++|+.| ++
T Consensus 107 ~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L------~L 176 (317)
T 3o53_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDE-GCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL------NL 176 (317)
T ss_dssp CSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCT-GGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE------EC
T ss_pred CCCccCCcCcc---ccCCCCEEECCCCCCCCccchhh-hccCCCCEEECCCCCCCcccHHHHhhccCcCCEE------EC
Confidence 99999975544 36789999999999996545455 5899999999999999998777764 66666654 99
Q ss_pred cCCCCCCCcccccccccCCcccccCCCCC
Q 042348 216 TYNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 216 ~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
++|++++. |....+.++..+.+.+|...
T Consensus 177 ~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 177 QYNFIYDV-KGQVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp TTSCCCEE-ECCCCCTTCCEEECCSSCCC
T ss_pred CCCcCccc-ccccccccCCEEECCCCcCC
Confidence 99999976 43334666777778887654
No 356
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.65 E-value=2.1e-16 Score=175.07 Aligned_cols=164 Identities=21% Similarity=0.301 Sum_probs=120.2
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 46889999999998 567 457889999999999986 777 665 89999999999986 666 6788899999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccc-ccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRL-RLLAQRVYVDL 215 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-~~l~~~~~l~l 215 (686)
++|.|++ +|. .+++|+.|+|++|+|++ +|. +. ++|+.|+|++|+|+. +|. +.. +| ...+.+..|+|
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~---~~L~~L~Ls~N~L~~-lp~-~~~--~L~~~~~~L~~L~L 214 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP---ESLEALDVSTNLLES-LPA-VPV--RNHHSEETEIFFRC 214 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC---TTCCEEECCSSCCSS-CCC-CC----------CCEEEEC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh---CCCCEEECcCCCCCc-hhh-HHH--hhhcccccceEEec
Confidence 9998886 665 56788888888888885 776 42 788888888888884 454 443 34 00111245588
Q ss_pred cCCCCCCCcccccccccCCcccccCCCCCC
Q 042348 216 TYNNLSGLIPQNAALLSLGPTAFIGNPFLC 245 (686)
Q Consensus 216 ~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c 245 (686)
++|+|+.+++....+.++..+.+.+|+..+
T Consensus 215 s~N~l~~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 215 RENRITHIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CSSCCCCCCGGGGGSCTTEEEECCSSSCCH
T ss_pred CCCcceecCHHHhcCCCCCEEEeeCCcCCC
Confidence 888888655545556666667777887654
No 357
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.65 E-value=4.7e-17 Score=186.85 Aligned_cols=141 Identities=20% Similarity=0.219 Sum_probs=124.9
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
...++.|+|++|.+. .+|..+..|++|+.|+|++|.|+ .+|..|.+|++|++|+|++|+|+ .+|..|+.|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 467899999999999 68888889999999999999999 89999999999999999999999 8899999999999999
Q ss_pred ccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhc
Q 042348 136 LSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIAN 200 (686)
Q Consensus 136 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 200 (686)
|++|.|+ .+|..|..+++|+.|+|++|+|++.+|..+...-..+..|+|++|.+++.+|..+..
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~ 363 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRF 363 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccce
Confidence 9999998 789889999999999999999999888776422223345899999999999876543
No 358
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=5.4e-17 Score=168.78 Aligned_cols=133 Identities=13% Similarity=0.091 Sum_probs=96.9
Q ss_pred hcccCccCceEEEEEEeCCCceEEEEEcCCCCcc--------------chH--------HHHHHHHHHhccCCCCcceee
Q 042348 372 AFLLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQ--------------RFK--------EFQTEAEAIGKIRHPNIVSLR 429 (686)
Q Consensus 372 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~--------~~~~E~~~l~~l~H~nIv~l~ 429 (686)
...||+|++|.||+|...+|+.||||.++..... ... ...+|...|.++.+.++....
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 3469999999999999999999999987532100 001 123567777777555443222
Q ss_pred EEEEecCceeEEEeccCCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCC
Q 042348 430 AYFWSVDEKLLIYDYIPNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNM 509 (686)
Q Consensus 430 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~ 509 (686)
-+.. ...++||||+++++|.++.. ......++.|++.+|.|||+ .+||||||||.|||+++++
T Consensus 180 p~~~--~~~~LVME~i~G~~L~~l~~------------~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 180 PIAQ--SRHTIVMSLVDALPMRQVSS------------VPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp EEEE--ETTEEEEECCSCEEGGGCCC------------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred eeec--cCceEEEEecCCccHhhhcc------------cHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 2211 23479999999988876432 12346789999999999999 8999999999999998776
Q ss_pred C----------eEEeecCcccc
Q 042348 510 E----------PHISDFGLARL 521 (686)
Q Consensus 510 ~----------~kl~DfGla~~ 521 (686)
. +.|+||+-+-.
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 3 89999997753
No 359
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=4.5e-16 Score=148.47 Aligned_cols=128 Identities=29% Similarity=0.379 Sum_probs=110.1
Q ss_pred CEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhcccccccccccc
Q 042348 84 GRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQN 163 (686)
Q Consensus 84 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (686)
+.+++++|.|+ .+|..+. ++|+.|+|++|+|+ .+|..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57999999998 7887664 68999999999998 78899999999999999999999888888999999999999999
Q ss_pred ccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCC
Q 042348 164 SFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSG 222 (686)
Q Consensus 164 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~ 222 (686)
+|++..|..+ ..+++|+.|+|++|+|++..+..+..+++|+.| ++++|.+..
T Consensus 89 ~l~~i~~~~f-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTF-DGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL------AIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTT-TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE------ECCSSCEEC
T ss_pred ccCEeCHHHh-CCCCCCCEEECCCCCCCeeChhhhhcCccccEE------EeCCCCeec
Confidence 9996555455 589999999999999998877778887777654 777776654
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.64 E-value=3.8e-16 Score=174.87 Aligned_cols=169 Identities=27% Similarity=0.408 Sum_probs=143.4
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|.+... | .|..|++|+.|+|++|+|++..| +.++++|+.|+|++|+|++ +| .+..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 5788899999999864 4 69999999999999999996554 8999999999999999985 44 7999999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|.+++ + ..+..+++|+.|+|++|++++ + ..+ ..+++|+.|+|++|+|++.+| +..|++|+.| +|+
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l-~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L------~Ls 183 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVL-SRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL------YLS 183 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCC-C-GGG-GSCTTCSEEECCSSCCCCCGG--GTTCTTCCEE------ECC
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCC-c-hhh-cccCCCCEEECcCCcCCCchh--hccCCCCCEE------ECc
Confidence 9999996 4 468999999999999999996 4 344 589999999999999998876 7777777655 999
Q ss_pred CCCCCCCcccccccccCCcccccCCCCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNPFLC 245 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~~~c 245 (686)
+|+|++. |....+.++..+.+.+|+...
T Consensus 184 ~N~i~~l-~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 184 KNHISDL-RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp SSCCCBC-GGGTTCTTCSEEECCSEEEEC
T ss_pred CCCCCCC-hHHccCCCCCEEEccCCcCcC
Confidence 9999985 555566777777788887543
No 361
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=7.3e-16 Score=144.96 Aligned_cols=135 Identities=24% Similarity=0.282 Sum_probs=115.8
Q ss_pred CCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccc
Q 042348 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQ 162 (686)
Q Consensus 83 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (686)
.+.+++++|.++ .+|..+. ++|+.|+|++|++++..+..|+.+++|++|+|++|.+++..+..+..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 468999999998 6776553 7999999999999977777789999999999999999977777789999999999999
Q ss_pred cccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCCCCCCCcccc
Q 042348 163 NSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQN 227 (686)
Q Consensus 163 N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~ 227 (686)
|++++ +|...+..+++|++|+|++|+|++.++..+..+++|+.| ++++|.+++..|..
T Consensus 86 N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L------~l~~N~~~~~~~~l 143 (177)
T 2o6r_A 86 NKLQS-LPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKI------WLHTNPWDCSCPRI 143 (177)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE------ECCSSCBCCCHHHH
T ss_pred CCccc-cCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEE------EecCCCeeccCccH
Confidence 99996 555444689999999999999998877777878777655 99999999987743
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.64 E-value=4.3e-16 Score=156.45 Aligned_cols=167 Identities=22% Similarity=0.279 Sum_probs=137.1
Q ss_pred EEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccC
Q 042348 59 VFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQ 138 (686)
Q Consensus 59 ~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~ 138 (686)
++.+++++|.+++.. .+..+++|+.|+|++|.|+ .+| .+..+++|+.|+|++|++++..+ +..+++|+.|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 445677888888654 6888999999999999998 567 78999999999999999996444 99999999999999
Q ss_pred CCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccccCC
Q 042348 139 NSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLTYN 218 (686)
Q Consensus 139 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~~N 218 (686)
|++++ +|.... .+|+.|+|++|++++ ++ .+ ..+++|+.|+|++|++++. | .+..+++|+. |++++|
T Consensus 95 N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l-~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~------L~L~~N 160 (263)
T 1xeu_A 95 NRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SL-IHLKNLEILSIRNNKLKSI-V-MLGFLSKLEV------LDLHGN 160 (263)
T ss_dssp SCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GG-TTCTTCCEEECTTSCCCBC-G-GGGGCTTCCE------EECTTS
T ss_pred CccCC-cCcccc--CcccEEEccCCccCC-Ch-hh-cCcccccEEECCCCcCCCC-h-HHccCCCCCE------EECCCC
Confidence 99996 554333 899999999999995 54 34 5899999999999999985 3 5666666665 499999
Q ss_pred CCCCCcccccccccCCcccccCCCCCCC
Q 042348 219 NLSGLIPQNAALLSLGPTAFIGNPFLCG 246 (686)
Q Consensus 219 ~l~~~~p~~~~~~~~~~~~~~~n~~~c~ 246 (686)
++++. +....+.++..+.+.+|+..+.
T Consensus 161 ~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 161 EITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred cCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 99987 5455566777788889987665
No 363
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.63 E-value=9.1e-16 Score=167.79 Aligned_cols=168 Identities=30% Similarity=0.429 Sum_probs=125.5
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|++++|.+++. +.+..+++|+.|++++|.+++..| +..+++|+.|+|++|++++ ++ .+..+++|+.|++
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l 250 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDL 250 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEEC
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEEC
Confidence 5688888888888764 347888888888888888886555 6778888888888888874 33 5778888888888
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|.+++..| +..+++|+.|+|++|++++ ++. + ..+++|+.|+|++|++++..| +..+++|+.| +++
T Consensus 251 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~-~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L------~L~ 317 (466)
T 1o6v_A 251 ANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-L-AGLTALTNLELNENQLEDISP--ISNLKNLTYL------TLY 317 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-G-TTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE------ECC
T ss_pred CCCccccchh--hhcCCCCCEEECCCCccCc-ccc-c-cCCCccCeEEcCCCcccCchh--hcCCCCCCEE------ECc
Confidence 8888886544 7788888888888888885 443 3 478888888888888887654 5566655544 888
Q ss_pred CCCCCCCcccccccccCCcccccCCCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
+|++++..| ...+.++..+.+.+|...
T Consensus 318 ~n~l~~~~~-~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 318 FNNISDISP-VSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp SSCCSCCGG-GGGCTTCCEEECCSSCCC
T ss_pred CCcCCCchh-hccCccCCEeECCCCccC
Confidence 888887766 344555666666666543
No 364
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.63 E-value=9.5e-16 Score=166.65 Aligned_cols=149 Identities=19% Similarity=0.175 Sum_probs=89.3
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|++++|...+.+ .++.+++|+.|+|++|++++ +| +..+++|+.|+|++|++++. .++.+++|+.|+|
T Consensus 148 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEEC
Confidence 45667777777555555 36667777777777777764 44 66667777777777777643 3666677777777
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCc-------ccceecccccccCCCCchhhhcccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLT-------ALQKLDLSFNNLSGLIPNDIANLSRLRLLAQ 209 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~ 209 (686)
++|++++ +| +..+++|+.|+|++|++++..+..+ .+|. +|+.|++++|.+.+.+| ++.+++|+.
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l-~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~--- 290 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTL-SKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKE--- 290 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTC-TTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCC---
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHC-CCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCE---
Confidence 7777765 45 5666677777777777765332222 2333 34455555555555544 233444433
Q ss_pred cccccccCCCCCCCcc
Q 042348 210 RVYVDLTYNNLSGLIP 225 (686)
Q Consensus 210 ~~~l~l~~N~l~~~~p 225 (686)
|++++|.+.+.+|
T Consensus 291 ---L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 291 ---LDVTHNTQLYLLD 303 (457)
T ss_dssp ---CCCTTCTTCCEEE
T ss_pred ---EECCCCcccceec
Confidence 3566666555555
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.62 E-value=7.3e-18 Score=187.66 Aligned_cols=157 Identities=22% Similarity=0.252 Sum_probs=124.0
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCC-------------CcccCCccccCC--------------------
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNN-------------FSGSLPVELFNA-------------------- 104 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~-------------l~g~~p~~~~~l-------------------- 104 (686)
+++.|+|++|+|+ .+|..+++|++|+.|++++|. +.+.+|..+.++
T Consensus 350 ~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l 428 (567)
T 1dce_A 350 QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSK 428 (567)
T ss_dssp TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhh
Confidence 3446778888887 678888888889888887775 444455433221
Q ss_pred ------------CCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchh
Q 042348 105 ------------SNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDG 172 (686)
Q Consensus 105 ------------~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 172 (686)
..|+.|+|++|+|++ +|. |+.+++|+.|+|++|.|+ .+|..++.+++|+.|+|++|+|++ +| .
T Consensus 429 ~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~ 503 (567)
T 1dce_A 429 FLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-G 503 (567)
T ss_dssp HHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-G
T ss_pred hhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-c
Confidence 247788899999985 676 888999999999999998 788889999999999999999986 77 5
Q ss_pred hhhcCcccceecccccccCCCC-chhhhcccccccccccccccccCCCCCCCcccc
Q 042348 173 FATNLTALQKLDLSFNNLSGLI-PNDIANLSRLRLLAQRVYVDLTYNNLSGLIPQN 227 (686)
Q Consensus 173 ~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~~ 227 (686)
+ ..+++|+.|+|++|+|++.+ |..++.|++|+.| +|++|+|++.+|..
T Consensus 504 l-~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L------~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 504 V-ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL------NLQGNSLCQEEGIQ 552 (567)
T ss_dssp G-TTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE------ECTTSGGGGSSSCT
T ss_pred c-CCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE------EecCCcCCCCccHH
Confidence 5 57899999999999999887 8888888877755 89999998877654
No 366
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.61 E-value=3.1e-15 Score=162.60 Aligned_cols=146 Identities=22% Similarity=0.218 Sum_probs=112.8
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|+|++|++++ +| ++.+++|+.|+|++|+|++ +| +.++++|++|+|++|...+.+ .++.+++|+.|++
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 578899999999998 44 8899999999999999986 43 778888888888888666666 4778888888888
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|++++ +| +..+++|+.|+|++|++++. + + ..+++|+.|+|++|++++ +| +..+++|+. |+++
T Consensus 178 s~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l-~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~------L~l~ 241 (457)
T 3bz5_A 178 SFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--L-NQNIQLTFLDCSSNKLTE-ID--VTPLTQLTY------FDCS 241 (457)
T ss_dssp CSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--C-TTCTTCSEEECCSSCCSC-CC--CTTCTTCSE------EECC
T ss_pred CCCccce-ec--cccCCCCCEEECcCCcCCee-c--c-ccCCCCCEEECcCCcccc-cC--ccccCCCCE------EEee
Confidence 8888886 55 67778888888888888753 3 3 467888888888888887 44 555555554 4788
Q ss_pred CCCCCCCccc
Q 042348 217 YNNLSGLIPQ 226 (686)
Q Consensus 217 ~N~l~~~~p~ 226 (686)
+|++++.++.
T Consensus 242 ~N~l~~~~~~ 251 (457)
T 3bz5_A 242 VNPLTELDVS 251 (457)
T ss_dssp SSCCSCCCCT
T ss_pred CCcCCCcCHH
Confidence 8888776543
No 367
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.61 E-value=5.3e-17 Score=169.55 Aligned_cols=178 Identities=23% Similarity=0.211 Sum_probs=137.0
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCccc-CCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGS-LPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
..++.|++++|.+++..+. +..+++|+.|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5677888888888876655 56789999999999998865 788888899999999999998888888888899999999
Q ss_pred ccCC-CCCCC-CChhhhhcccccccccccc-ccCCC-CchhhhhcCc-ccceeccccc--ccC-CCCchhhhcccccccc
Q 042348 136 LSQN-SFSSS-IPSSIVQCKRLKTVVLNQN-SFTGP-LPDGFATNLT-ALQKLDLSFN--NLS-GLIPNDIANLSRLRLL 207 (686)
Q Consensus 136 ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~l 207 (686)
|++| .+++. +|..+..+++|++|+|++| .+++. ++..+ ..++ +|++|+|++| .++ +.+|..+..+++|+.|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~-~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV-AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH-HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH-HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 9998 67753 6777888999999999999 88753 44444 5788 9999999999 555 4566677777776655
Q ss_pred cccccccccCCC-CCCCcc-cccccccCCcccccCCC
Q 042348 208 AQRVYVDLTYNN-LSGLIP-QNAALLSLGPTAFIGNP 242 (686)
Q Consensus 208 ~~~~~l~l~~N~-l~~~~p-~~~~~~~~~~~~~~~n~ 242 (686)
++++|. +++..+ ....+.++..+.+.+|.
T Consensus 228 ------~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 228 ------DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp ------ECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred ------eCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 899998 665444 33345556666666665
No 368
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.61 E-value=1.7e-15 Score=158.90 Aligned_cols=148 Identities=24% Similarity=0.359 Sum_probs=121.5
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|++++|.+++..+ +..+++|+.|+|++|.+++ +|. +..+++|++|+|++|.+++ + +.+..+++|+.|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred CccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 455666666666665433 7888999999999999985 444 8999999999999999985 4 46899999999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|.+++ + ..+..+++|+.|+|++|++++..|..+ ..+++|+.|+|++|.+++.+| +..+++|+.| |++
T Consensus 273 ~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L------~l~ 341 (347)
T 4fmz_A 273 GSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVI-GGLTNLTTLFLSQNHITDIRP--LASLSKMDSA------DFA 341 (347)
T ss_dssp CSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHH-HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEE------SSS
T ss_pred cCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHh-hccccCCEEEccCCccccccC--hhhhhcccee------ehh
Confidence 9999996 4 458899999999999999997666666 589999999999999998776 7777776655 999
Q ss_pred CCCCC
Q 042348 217 YNNLS 221 (686)
Q Consensus 217 ~N~l~ 221 (686)
+|.++
T Consensus 342 ~N~i~ 346 (347)
T 4fmz_A 342 NQVIK 346 (347)
T ss_dssp CC---
T ss_pred hhccc
Confidence 99886
No 369
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.59 E-value=1.2e-16 Score=166.76 Aligned_cols=176 Identities=21% Similarity=0.231 Sum_probs=144.1
Q ss_pred CCEEEEEeCCCCcccc-CCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCC-CCCC-CCcccccCCCCCCE
Q 042348 57 GQVFSLIIPNKKLTGF-IPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGN-SFSG-PVPMQIGKLKYLQV 133 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~-~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N-~l~g-~~p~~~~~l~~L~~ 133 (686)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++ .++..+..+++|+.
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5789999999999977 8888999999999999999999888999999999999999999 7876 37777899999999
Q ss_pred EeccCC-CCCCC-CChhhhhcc-cccccccccc--ccC-CCCchhhhhcCcccceecccccc-cCCCCchhhhccccccc
Q 042348 134 LDLSQN-SFSSS-IPSSIVQCK-RLKTVVLNQN--SFT-GPLPDGFATNLTALQKLDLSFNN-LSGLIPNDIANLSRLRL 206 (686)
Q Consensus 134 L~ls~N-~l~~~-~p~~~~~l~-~L~~L~L~~N--~l~-~~~p~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~ 206 (686)
|+|++| .+++. ++..+..++ +|++|+|++| .++ +.+|..+ ..+++|+.|+|++|. +++..+..+..+++|+.
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~-~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLV-RRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHH-HHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHH-hhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 999999 99864 678889999 9999999999 555 3456555 579999999999999 77777778887777765
Q ss_pred ccccccccccCCCCCCCccc----ccccccCCcccccCC
Q 042348 207 LAQRVYVDLTYNNLSGLIPQ----NAALLSLGPTAFIGN 241 (686)
Q Consensus 207 l~~~~~l~l~~N~l~~~~p~----~~~~~~~~~~~~~~n 241 (686)
| ++++|. +..+. ...+.++..+.+.+|
T Consensus 252 L------~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 252 L------SLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp E------ECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred e------eCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 5 999996 33333 223444555555555
No 370
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.58 E-value=4.1e-17 Score=173.92 Aligned_cols=159 Identities=23% Similarity=0.264 Sum_probs=80.7
Q ss_pred CCEEEEEeCCC---CccccCCcCc-------CCCCCCCEEEccCCCCcc----cCCccccCCCCCcEEEccCCCCCCCCc
Q 042348 57 GQVFSLIIPNK---KLTGFIPADL-------GSLSAIGRVNLRNNNFSG----SLPVELFNASNLQSLILSGNSFSGPVP 122 (686)
Q Consensus 57 ~~~~~l~l~~n---~l~g~~p~~l-------~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~~p 122 (686)
..++.|+|++| ++++.+|..+ ..+++|++|+|++|.|++ .+|..+.++++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 35556666553 4444445443 455666666666666654 345555556666666666666543222
Q ss_pred ccc----cCC---------CCCCEEeccCCCCC-CCCC---hhhhhccccccccccccccC--C---CCchhhhhcCccc
Q 042348 123 MQI----GKL---------KYLQVLDLSQNSFS-SSIP---SSIVQCKRLKTVVLNQNSFT--G---PLPDGFATNLTAL 180 (686)
Q Consensus 123 ~~~----~~l---------~~L~~L~ls~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~~l~~L 180 (686)
..+ ..+ ++|++|+|++|+++ +.+| ..+..+++|+.|+|++|+++ | .+|..+ ..+++|
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l-~~~~~L 218 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGL-AYCQEL 218 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTG-GGCTTC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHh-hcCCCc
Confidence 222 222 55666666666655 2333 24445555666666666554 1 111122 345556
Q ss_pred ceecccccccC----CCCchhhhcccccccccccccccccCCCCCC
Q 042348 181 QKLDLSFNNLS----GLIPNDIANLSRLRLLAQRVYVDLTYNNLSG 222 (686)
Q Consensus 181 ~~L~Ls~N~l~----~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~ 222 (686)
+.|+|++|.++ +.+|..+..+++|+.| +|++|++++
T Consensus 219 ~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L------~L~~n~i~~ 258 (386)
T 2ca6_A 219 KVLDLQDNTFTHLGSSALAIALKSWPNLREL------GLNDCLLSA 258 (386)
T ss_dssp CEEECCSSCCHHHHHHHHHHHGGGCTTCCEE------ECTTCCCCH
T ss_pred cEEECcCCCCCcHHHHHHHHHHccCCCcCEE------ECCCCCCch
Confidence 66666666554 3344444444444332 555555544
No 371
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.58 E-value=2.1e-15 Score=169.14 Aligned_cols=164 Identities=26% Similarity=0.353 Sum_probs=119.8
Q ss_pred CCCCCCCCCcceeee--------EecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcE
Q 042348 38 NWNNSNEDPCSWNGI--------TCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQS 109 (686)
Q Consensus 38 ~w~~~~~~~c~w~gv--------~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 109 (686)
.|.. +.+||.|.|. .|....++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. .+++|++
T Consensus 14 ~W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~ 85 (622)
T 3g06_A 14 AWRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRT 85 (622)
T ss_dssp HHHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCE
T ss_pred HHHh-cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCE
Confidence 3554 3567888654 344557889999999998 6787776 78999999999998 5776 5788999
Q ss_pred EEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccc
Q 042348 110 LILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNN 189 (686)
Q Consensus 110 L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~ 189 (686)
|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+.+|+.|+|++|++++ +|. .+++|++|+|++|+
T Consensus 86 L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~----~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 86 LEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPV----LPPGLQELSVSDNQ 152 (622)
T ss_dssp EEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSC
T ss_pred EEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCC----CCCCCCEEECcCCc
Confidence 999999998 5665 67889999999999885 555 56788888888888884 664 35788888888888
Q ss_pred cCCCCchhhhccccc-----------ccccccccccccCCCCCCC
Q 042348 190 LSGLIPNDIANLSRL-----------RLLAQRVYVDLTYNNLSGL 223 (686)
Q Consensus 190 l~~~~p~~~~~l~~L-----------~~l~~~~~l~l~~N~l~~~ 223 (686)
+++. |..+.+|..| ..++.+..|++++|++++.
T Consensus 153 l~~l-~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~l 196 (622)
T 3g06_A 153 LASL-PALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASL 196 (622)
T ss_dssp CSCC-CCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCC
T ss_pred CCCc-CCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCCC
Confidence 8863 4333333332 0114455667777777763
No 372
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.57 E-value=2.9e-16 Score=165.69 Aligned_cols=186 Identities=24% Similarity=0.204 Sum_probs=128.5
Q ss_pred CCCEEEEEeCCCCccccCC----cCcCCCC-CCCEEEccCCCCcccCCccccCC-----CCCcEEEccCCCCCCCCcccc
Q 042348 56 EGQVFSLIIPNKKLTGFIP----ADLGSLS-AIGRVNLRNNNFSGSLPVELFNA-----SNLQSLILSGNSFSGPVPMQI 125 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p----~~l~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~ 125 (686)
...++.|+|++|.+++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|.+++..+..+
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 3458889999998887666 6777888 88999999998887777777664 889999999998887766654
Q ss_pred cC----C-CCCCEEeccCCCCCCCCChhhhh-----ccccccccccccccCCCCchhhh---hcCc-ccceecccccccC
Q 042348 126 GK----L-KYLQVLDLSQNSFSSSIPSSIVQ-----CKRLKTVVLNQNSFTGPLPDGFA---TNLT-ALQKLDLSFNNLS 191 (686)
Q Consensus 126 ~~----l-~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~~~---~~l~-~L~~L~Ls~N~l~ 191 (686)
.. + ++|+.|+|++|.+++..+..+.. ..+|++|+|++|+++..-+..+. ..++ +|++|+|++|+++
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 43 3 78899999999888766655544 35888999999988853333221 2344 8889999999988
Q ss_pred CCCchhhhcccccccc-cccccccccCCCCCCC----cccccc--cccCCcccccCCCC
Q 042348 192 GLIPNDIANLSRLRLL-AQRVYVDLTYNNLSGL----IPQNAA--LLSLGPTAFIGNPF 243 (686)
Q Consensus 192 ~~~p~~~~~l~~L~~l-~~~~~l~l~~N~l~~~----~p~~~~--~~~~~~~~~~~n~~ 243 (686)
+..+..+... |... ..+..|||++|+++.. ++.... ..++..+++.+|..
T Consensus 181 ~~~~~~l~~~--l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 237 (362)
T 3goz_A 181 SKNCAELAKF--LASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCL 237 (362)
T ss_dssp GSCHHHHHHH--HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCC
T ss_pred hhhHHHHHHH--HHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCC
Confidence 8777666543 1111 1233458999988863 222221 12455566666643
No 373
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=2.9e-15 Score=140.67 Aligned_cols=132 Identities=18% Similarity=0.188 Sum_probs=79.1
Q ss_pred cCCCCCCCEEEccCCCCcccCCccccCC-CCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhcccc
Q 042348 77 LGSLSAIGRVNLRNNNFSGSLPVELFNA-SNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRL 155 (686)
Q Consensus 77 l~~l~~L~~L~L~~N~l~g~~p~~~~~l-~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 155 (686)
+.++.+|+.|+|++|+++ .+|. +..+ ++|++|+|++|.+++. ..++.+++|++|+|++|.+++..|..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 445566666666666666 3443 3333 3677777777766643 456666677777777777664434444666677
Q ss_pred ccccccccccCCCCch--hhhhcCcccceecccccccCCCCch----hhhcccccccccccccccccCCCCC
Q 042348 156 KTVVLNQNSFTGPLPD--GFATNLTALQKLDLSFNNLSGLIPN----DIANLSRLRLLAQRVYVDLTYNNLS 221 (686)
Q Consensus 156 ~~L~L~~N~l~~~~p~--~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~l~~~~~l~l~~N~l~ 221 (686)
++|+|++|+++ .+|. .+ ..+++|+.|+|++|.++.. |. .+..+++|+.| |++.|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l-~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~L------d~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPL-ASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVL------DFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGG-GGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEE------TTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhh-hcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCcccee------CCCcCCHH
Confidence 77777777665 4554 33 3566777777777777643 33 25555555433 66666554
No 374
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=4.5e-15 Score=139.41 Aligned_cols=131 Identities=17% Similarity=0.135 Sum_probs=112.3
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCC-CCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEE
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLS-AIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVL 134 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 134 (686)
...++.|+|++|+++. +|. +..+. +|+.|+|++|.|++. ..+.++++|++|+|++|++++..+..+..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 3578999999999995 454 55555 999999999999965 688999999999999999996544556999999999
Q ss_pred eccCCCCCCCCCh--hhhhccccccccccccccCCCCchh---hhhcCcccceecccccccCC
Q 042348 135 DLSQNSFSSSIPS--SIVQCKRLKTVVLNQNSFTGPLPDG---FATNLTALQKLDLSFNNLSG 192 (686)
Q Consensus 135 ~ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~---~~~~l~~L~~L~Ls~N~l~~ 192 (686)
+|++|+++ .+|. .+..+++|+.|+|++|.++ .+|.. ....+++|+.||+++|.+..
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999997 5776 8899999999999999998 56764 34589999999999998763
No 375
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.56 E-value=1.2e-14 Score=157.77 Aligned_cols=159 Identities=25% Similarity=0.303 Sum_probs=106.3
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.|++++|++++ +|.. .++|++|+|++|++++ +| ++.++++|++|+|++|++++ +|..+ .+|++|++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 355666666666654 2221 1578888888888885 77 58888888888888888874 56543 47888888
Q ss_pred cCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDLT 216 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l~ 216 (686)
++|++++ +| .+..+++|++|++++|++++ +|.. .++|+.|+|++|+++ .+|. ++.+++|+.| +++
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L------~l~ 245 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL----PLSLESIVAGNNILE-ELPE-LQNLPFLTTI------YAD 245 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC----CTTCCEEECCSSCCS-SCCC-CTTCTTCCEE------ECC
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC----cCcccEEECcCCcCC-cccc-cCCCCCCCEE------ECC
Confidence 8888885 56 57788888888888888875 5542 357888888888887 4553 6666665544 777
Q ss_pred CCCCCCCcccccccccCCcccccCCCC
Q 042348 217 YNNLSGLIPQNAALLSLGPTAFIGNPF 243 (686)
Q Consensus 217 ~N~l~~~~p~~~~~~~~~~~~~~~n~~ 243 (686)
+|++++. |.. ..++....+.+|..
T Consensus 246 ~N~l~~l-~~~--~~~L~~L~l~~N~l 269 (454)
T 1jl5_A 246 NNLLKTL-PDL--PPSLEALNVRDNYL 269 (454)
T ss_dssp SSCCSSC-CSC--CTTCCEEECCSSCC
T ss_pred CCcCCcc-ccc--ccccCEEECCCCcc
Confidence 7777763 322 13344455555543
No 376
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.56 E-value=1.5e-14 Score=156.97 Aligned_cols=161 Identities=22% Similarity=0.284 Sum_probs=126.8
Q ss_pred CCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEe
Q 042348 56 EGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLD 135 (686)
Q Consensus 56 ~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 135 (686)
...++.|+|++|.+++ +|.. +++|+.|++++|++++ +|.. .++|++|+|++|++++ +| .|+.+++|++|+
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 3578889999999887 6653 4788999999999884 4432 2689999999999996 78 699999999999
Q ss_pred ccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccccccccccc
Q 042348 136 LSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVYVDL 215 (686)
Q Consensus 136 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~l~l 215 (686)
+++|++++ +|..+ .+|++|+|++|++++ +| .+ .++++|+.|++++|++++ +|... ++|+ .|++
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~-~~l~~L~~L~l~~N~l~~-l~~~~---~~L~------~L~l 222 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-EL-QNLPFLTAIYADNNSLKK-LPDLP---LSLE------SIVA 222 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CC-TTCTTCCEEECCSSCCSS-CCCCC---TTCC------EEEC
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cc-cCCCCCCEEECCCCcCCc-CCCCc---Cccc------EEEC
Confidence 99999996 66543 589999999999996 77 44 589999999999999997 44433 2343 4599
Q ss_pred cCCCCCCCcccccccccCCcccccCCCCC
Q 042348 216 TYNNLSGLIPQNAALLSLGPTAFIGNPFL 244 (686)
Q Consensus 216 ~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 244 (686)
++|+++ .+|....+..+....+.+|...
T Consensus 223 ~~n~l~-~lp~~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 223 GNNILE-ELPELQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp CSSCCS-SCCCCTTCTTCCEEECCSSCCS
T ss_pred cCCcCC-cccccCCCCCCCEEECCCCcCC
Confidence 999999 5666555666777778887654
No 377
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=1.3e-17 Score=160.11 Aligned_cols=134 Identities=24% Similarity=0.258 Sum_probs=101.1
Q ss_pred CCEEEEEeCCCCccccCCc------CcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCC
Q 042348 57 GQVFSLIIPNKKLTGFIPA------DLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKY 130 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~------~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 130 (686)
..++.++++++.++|.+|. .+..+++|+.|+|++|.|++ +| .+.++++|++|+|++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 4556666777777777766 78888888888888888875 66 7778888888888888887 67777777788
Q ss_pred CCEEeccCCCCCCCCChhhhhccccccccccccccCCCCch-hhhhcCcccceecccccccCCCCch
Q 042348 131 LQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPD-GFATNLTALQKLDLSFNNLSGLIPN 196 (686)
Q Consensus 131 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~l~~L~~L~Ls~N~l~~~~p~ 196 (686)
|+.|+|++|++++ +| .+..+++|+.|+|++|++++ ++. .....+++|++|+|++|.+++.+|.
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 8888888888885 45 57788888888888888874 333 2335788888888888888776554
No 378
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.56 E-value=1e-15 Score=161.56 Aligned_cols=180 Identities=19% Similarity=0.186 Sum_probs=139.0
Q ss_pred EEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCC----ccccCCC-CCcEEEccCCCCCCCCcccccCC-----CC
Q 042348 61 SLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLP----VELFNAS-NLQSLILSGNSFSGPVPMQIGKL-----KY 130 (686)
Q Consensus 61 ~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p----~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~ 130 (686)
.+.|++|+++|.+|..+...++|+.|+|++|.|++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46789999999999988888889999999999997666 6788898 99999999999998888888775 99
Q ss_pred CCEEeccCCCCCCCCChhhhhc-----cccccccccccccCCCCchhhhh---c-CcccceecccccccCCCCchhhhcc
Q 042348 131 LQVLDLSQNSFSSSIPSSIVQC-----KRLKTVVLNQNSFTGPLPDGFAT---N-LTALQKLDLSFNNLSGLIPNDIANL 201 (686)
Q Consensus 131 L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~---~-l~~L~~L~Ls~N~l~~~~p~~~~~l 201 (686)
|++|+|++|.+++..+..+... ++|++|+|++|++++..+..+.. . .++|++|+|++|++++..+..+...
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999998777766554 89999999999998665554432 2 3699999999999997655444221
Q ss_pred ccccccc-ccccccccCCCCCCCcccccc-----c-ccCCcccccCCC
Q 042348 202 SRLRLLA-QRVYVDLTYNNLSGLIPQNAA-----L-LSLGPTAFIGNP 242 (686)
Q Consensus 202 ~~L~~l~-~~~~l~l~~N~l~~~~p~~~~-----~-~~~~~~~~~~n~ 242 (686)
+..++ .+..|+|++|++++..+.... . .++..+++.+|.
T Consensus 162 --l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 207 (362)
T 3goz_A 162 --LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANL 207 (362)
T ss_dssp --HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSC
T ss_pred --HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCC
Confidence 11111 334569999999987664322 1 245555566654
No 379
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.55 E-value=3.9e-16 Score=166.35 Aligned_cols=181 Identities=16% Similarity=0.284 Sum_probs=139.8
Q ss_pred CCEEEEEeCCCCcccc----CCcCcCCCCCCCEEEccCC---CCcccCCccc-------cCCCCCcEEEccCCCCCC---
Q 042348 57 GQVFSLIIPNKKLTGF----IPADLGSLSAIGRVNLRNN---NFSGSLPVEL-------FNASNLQSLILSGNSFSG--- 119 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~----~p~~l~~l~~L~~L~L~~N---~l~g~~p~~~-------~~l~~L~~L~L~~N~l~g--- 119 (686)
..++.|+|++|.+++. ++..|..+++|+.|+|++| ++++.+|..+ .++++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 5789999999999987 4455889999999999995 5666777665 789999999999999997
Q ss_pred -CCcccccCCCCCCEEeccCCCCCCCCChhhh----hc---------cccccccccccccC-CCCch--hhhhcCcccce
Q 042348 120 -PVPMQIGKLKYLQVLDLSQNSFSSSIPSSIV----QC---------KRLKTVVLNQNSFT-GPLPD--GFATNLTALQK 182 (686)
Q Consensus 120 -~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p~--~~~~~l~~L~~ 182 (686)
.+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+|. ..+..+++|++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4888899999999999999999754444443 44 89999999999998 44552 22247899999
Q ss_pred ecccccccC--C---CCchhhhcccccccccccccccccCCCCC----CCccccc-ccccCCcccccCCCC
Q 042348 183 LDLSFNNLS--G---LIPNDIANLSRLRLLAQRVYVDLTYNNLS----GLIPQNA-ALLSLGPTAFIGNPF 243 (686)
Q Consensus 183 L~Ls~N~l~--~---~~p~~~~~l~~L~~l~~~~~l~l~~N~l~----~~~p~~~-~~~~~~~~~~~~n~~ 243 (686)
|+|++|+++ | .+|..+..+++|+. |+|++|.++ +.+|... .+.++..+.+.+|..
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~------L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i 256 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKV------LDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLL 256 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCE------EECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccE------EECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCC
Confidence 999999998 3 33435666666654 599999996 4555443 345566666777753
No 380
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=8.4e-15 Score=162.99 Aligned_cols=108 Identities=21% Similarity=0.264 Sum_probs=84.8
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhcccccccccc
Q 042348 82 AIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLN 161 (686)
Q Consensus 82 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~ 161 (686)
.|+.|+|++|+|++ +|. +.++++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 37778888888874 665 788888888888888887 778888888888888888888885 66 77888888888888
Q ss_pred ccccCCCC-chhhhhcCcccceecccccccCCCCc
Q 042348 162 QNSFTGPL-PDGFATNLTALQKLDLSFNNLSGLIP 195 (686)
Q Consensus 162 ~N~l~~~~-p~~~~~~l~~L~~L~Ls~N~l~~~~p 195 (686)
+|+|++.+ |..+ ..+++|+.|+|++|.|++.+|
T Consensus 517 ~N~l~~~~~p~~l-~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPL-VSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGG-GGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHH-hcCCCCCEEEecCCcCCCCcc
Confidence 88888655 6666 378888888888888887655
No 381
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.53 E-value=4.1e-14 Score=158.65 Aligned_cols=54 Identities=22% Similarity=0.361 Sum_probs=31.5
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCC
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFS 118 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 118 (686)
..++.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+++
T Consensus 81 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~ 134 (622)
T 3g06_A 81 PELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT 134 (622)
T ss_dssp TTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS
T ss_pred CCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC
Confidence 467778888888774 454 55666777777776663 333 2334444444444443
No 382
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=3.2e-14 Score=132.64 Aligned_cols=104 Identities=20% Similarity=0.213 Sum_probs=70.4
Q ss_pred EEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCC
Q 042348 61 SLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNS 140 (686)
Q Consensus 61 ~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 140 (686)
.|++++|+|+. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 45666777774 565553 677777777777776667777777777777777777775555556777777777777777
Q ss_pred CCCCCChhhhhccccccccccccccCC
Q 042348 141 FSSSIPSSIVQCKRLKTVVLNQNSFTG 167 (686)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 167 (686)
|++..+..+..+++|+.|+|++|.++.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 775555556666666666666666553
No 383
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=6.4e-14 Score=130.60 Aligned_cols=108 Identities=23% Similarity=0.275 Sum_probs=96.3
Q ss_pred CCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccc
Q 042348 83 IGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQ 162 (686)
Q Consensus 83 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (686)
.+.|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 468999999998 6887764 8999999999999988899999999999999999999987777789999999999999
Q ss_pred cccCCCCchhhhhcCcccceecccccccCCCC
Q 042348 163 NSFTGPLPDGFATNLTALQKLDLSFNNLSGLI 194 (686)
Q Consensus 163 N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 194 (686)
|+|++ +|...+..+++|+.|+|++|.++...
T Consensus 88 N~l~~-~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKS-IPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCE-eCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99995 55554468999999999999999754
No 384
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=6.1e-14 Score=131.18 Aligned_cols=104 Identities=25% Similarity=0.271 Sum_probs=68.5
Q ss_pred EEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCC
Q 042348 60 FSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQN 139 (686)
Q Consensus 60 ~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (686)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 46777777775 4666554 67777777777777666777777777777777777777544445566777777777777
Q ss_pred CCCCCCChhhhhccccccccccccccC
Q 042348 140 SFSSSIPSSIVQCKRLKTVVLNQNSFT 166 (686)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 166 (686)
+|++..+..+..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 776544444555555555555555555
No 385
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.50 E-value=3e-14 Score=149.47 Aligned_cols=142 Identities=13% Similarity=0.098 Sum_probs=106.6
Q ss_pred eEecCCCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcc-cccCCCC
Q 042348 52 ITCREGQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPM-QIGKLKY 130 (686)
Q Consensus 52 v~c~~~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~ 130 (686)
-+|... +++.++++|+ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++
T Consensus 7 C~C~~~---~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 7 CHCSNR---VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp SEEETT---EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred cEeeCC---EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 357543 4678899999 578776 36899999999999955556799999999999999999876664 6788988
Q ss_pred CCE-EeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccc-cccCCCCchhhhc
Q 042348 131 LQV-LDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSF-NNLSGLIPNDIAN 200 (686)
Q Consensus 131 L~~-L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~ 200 (686)
|+. ++++.|+++...|..|..+++|++|++++|++++..+..+ ....++..|++++ |++....+..+..
T Consensus 81 l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~-~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK-IHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp CCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT-CCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hhhhhcccCCcccccCchhhhhccccccccccccccccCCchhh-cccchhhhhhhccccccccccccchhh
Confidence 875 6777899998888899999999999999999985433333 2444555555543 3444444444443
No 386
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=9.2e-14 Score=129.96 Aligned_cols=106 Identities=25% Similarity=0.283 Sum_probs=95.3
Q ss_pred CEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhcccccccccccc
Q 042348 84 GRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQN 163 (686)
Q Consensus 84 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (686)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 7888775 89999999999999888999999999999999999999766667789999999999999
Q ss_pred ccCCCCchhhhhcCcccceecccccccCCC
Q 042348 164 SFTGPLPDGFATNLTALQKLDLSFNNLSGL 193 (686)
Q Consensus 164 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~ 193 (686)
+|++ +|...+..+++|++|+|++|.++..
T Consensus 92 ~l~~-l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKS-IPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCC-CCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccce-eCHHHhccccCCCEEEeCCCCcccc
Confidence 9995 6665446899999999999999964
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.49 E-value=1.8e-16 Score=152.09 Aligned_cols=138 Identities=20% Similarity=0.269 Sum_probs=118.5
Q ss_pred cCCCCCCCEEEccCCCCcccCCc------cccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhh
Q 042348 77 LGSLSAIGRVNLRNNNFSGSLPV------ELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIV 150 (686)
Q Consensus 77 l~~l~~L~~L~L~~N~l~g~~p~------~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 150 (686)
+.....++.++|+.|.++|.+|. .+.++++|++|+|++|.+++ +| .+..+++|+.|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44566788888999999988887 89999999999999999996 77 8999999999999999999 6898888
Q ss_pred hccccccccccccccCCCCchhhhhcCcccceecccccccCCCCc-hhhhcccccccccccccccccCCCCCCCccc
Q 042348 151 QCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIP-NDIANLSRLRLLAQRVYVDLTYNNLSGLIPQ 226 (686)
Q Consensus 151 ~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~l~~~~~l~l~~N~l~~~~p~ 226 (686)
.+++|++|+|++|++++ +| .+ ..+++|++|+|++|++++..+ ..+..+++|+. |++++|.+++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~-~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~------L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GI-EKLVNLRVLYMSNNKITNWGEIDKLAALDKLED------LLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HH-HHHHHSSEEEESEEECCCHHHHHHHTTTTTCSE------EEECSCHHHHHHHT
T ss_pred cCCcCCEEECcCCcCCc-CC-cc-ccCCCCCEEECCCCcCCchhHHHHHhcCCCCCE------EEecCCcccccccc
Confidence 99999999999999996 66 45 479999999999999997543 45666666654 49999999988775
No 388
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=1.2e-13 Score=144.77 Aligned_cols=108 Identities=18% Similarity=0.208 Sum_probs=89.8
Q ss_pred cceeeeEecCCCEEEEEeCCC-CccccCCcCcCCCCCCCEEEccC-CCCcccCCccccCCCCCcEEEccCCCCCCCCccc
Q 042348 47 CSWNGITCREGQVFSLIIPNK-KLTGFIPADLGSLSAIGRVNLRN-NNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQ 124 (686)
Q Consensus 47 c~w~gv~c~~~~~~~l~l~~n-~l~g~~p~~l~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 124 (686)
|.|.+|.|. ++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..
T Consensus 8 C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 8 HGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp SSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred ccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 777777774 44 7875 777 99999999999996 9999877788999999999999999999888888
Q ss_pred ccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCC
Q 042348 125 IGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTG 167 (686)
Q Consensus 125 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 167 (686)
|.+|++|+.|+|++|+|++..+..+..+. |+.|+|++|.|..
T Consensus 76 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred hcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 99999999999999999965555555554 8888888888764
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.39 E-value=1.3e-14 Score=158.43 Aligned_cols=161 Identities=15% Similarity=0.103 Sum_probs=95.4
Q ss_pred CCEEEEEeCCCCccccCCcCcC-----CCCCCCEEEccCCCCccc----CCccccCCCCCcEEEccCCCCCCCC-----c
Q 042348 57 GQVFSLIIPNKKLTGFIPADLG-----SLSAIGRVNLRNNNFSGS----LPVELFNASNLQSLILSGNSFSGPV-----P 122 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~-----~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~-----p 122 (686)
..++.|+|++|.+++..+..+. .+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++.- +
T Consensus 170 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~ 249 (461)
T 1z7x_W 170 PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCP 249 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHH
Confidence 4677777777777665444333 255777777777777643 4556666777777777777765421 2
Q ss_pred ccccCCCCCCEEeccCCCCCCC----CChhhhhccccccccccccccCCCCchhhh----hcCcccceecccccccCCC-
Q 042348 123 MQIGKLKYLQVLDLSQNSFSSS----IPSSIVQCKRLKTVVLNQNSFTGPLPDGFA----TNLTALQKLDLSFNNLSGL- 193 (686)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~~l~~L~~L~Ls~N~l~~~- 193 (686)
..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+. ...++|+.|+|++|.+++.
T Consensus 250 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 329 (461)
T 1z7x_W 250 GLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC 329 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH
Confidence 2223466777777777777643 455666677777777777776533222222 1224677777777776654
Q ss_pred ---CchhhhcccccccccccccccccCCCCCCC
Q 042348 194 ---IPNDIANLSRLRLLAQRVYVDLTYNNLSGL 223 (686)
Q Consensus 194 ---~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~ 223 (686)
+|..+..+++|+.| |+++|++++.
T Consensus 330 ~~~l~~~l~~~~~L~~L------~Ls~n~i~~~ 356 (461)
T 1z7x_W 330 CSHFSSVLAQNRFLLEL------QISNNRLEDA 356 (461)
T ss_dssp HHHHHHHHHHCSSCCEE------ECCSSBCHHH
T ss_pred HHHHHHHHhhCCCccEE------EccCCccccc
Confidence 34444444444433 6666666543
No 390
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.34 E-value=3.3e-14 Score=155.09 Aligned_cols=181 Identities=18% Similarity=0.135 Sum_probs=138.5
Q ss_pred CCEEEEEeCCCCcccc----CCcCcCCCCCCCEEEccCCCCcccC-----CccccCCCCCcEEEccCCCCCCC----Ccc
Q 042348 57 GQVFSLIIPNKKLTGF----IPADLGSLSAIGRVNLRNNNFSGSL-----PVELFNASNLQSLILSGNSFSGP----VPM 123 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~----~p~~l~~l~~L~~L~L~~N~l~g~~-----p~~~~~l~~L~~L~L~~N~l~g~----~p~ 123 (686)
.+++.|+|++|.+++. ++..+..+++|+.|+|++|.+++.. +..+..+++|+.|+|++|.+++. ++.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 4899999999999974 6778888999999999999987532 22334689999999999999854 677
Q ss_pred cccCCCCCCEEeccCCCCCCCCChhhhhc-----cccccccccccccCCC----CchhhhhcCcccceecccccccCCCC
Q 042348 124 QIGKLKYLQVLDLSQNSFSSSIPSSIVQC-----KRLKTVVLNQNSFTGP----LPDGFATNLTALQKLDLSFNNLSGLI 194 (686)
Q Consensus 124 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~~~~ 194 (686)
.+..+++|+.|+|++|.+++..+..+... ++|+.|+|++|.+++. ++..+ ..+++|+.|||++|.+++..
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l-~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVL-AQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHH-HHCSSCCEEECCSSBCHHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHH-hhCCCccEEEccCCcccccc
Confidence 88889999999999999876555555543 6899999999999864 34444 46799999999999998765
Q ss_pred chhhhc-----ccccccccccccccccCCCCCC----Cccccc-ccccCCcccccCCCCC
Q 042348 195 PNDIAN-----LSRLRLLAQRVYVDLTYNNLSG----LIPQNA-ALLSLGPTAFIGNPFL 244 (686)
Q Consensus 195 p~~~~~-----l~~L~~l~~~~~l~l~~N~l~~----~~p~~~-~~~~~~~~~~~~n~~~ 244 (686)
+..+.. .++| ..|++++|++++ .+|... .+.++..+.+.+|+..
T Consensus 358 ~~~l~~~l~~~~~~L------~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 358 VRELCQGLGQPGSVL------RVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHHHHTSTTCCC------CEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHHHHHHcCCCCce------EEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 555543 3344 455999999985 555443 3566777788888653
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=1.5e-12 Score=136.39 Aligned_cols=106 Identities=23% Similarity=0.210 Sum_probs=93.7
Q ss_pred CEEEccCC-CCcccCCccccCCCCCcEEEccC-CCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhcccccccccc
Q 042348 84 GRVNLRNN-NFSGSLPVELFNASNLQSLILSG-NSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLN 161 (686)
Q Consensus 84 ~~L~L~~N-~l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~ 161 (686)
..+++++| .|+ .+|. +..+++|+.|+|++ |+|++..+..|+.|++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 898 5888 99999999999996 99998888899999999999999999999889999999999999999
Q ss_pred ccccCCCCchhhhhcCcccceecccccccCCC
Q 042348 162 QNSFTGPLPDGFATNLTALQKLDLSFNNLSGL 193 (686)
Q Consensus 162 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~ 193 (686)
+|+|++ +|...+..++ |+.|+|++|.|...
T Consensus 89 ~N~l~~-~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALES-LSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSC-CCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCccce-eCHHHcccCC-ceEEEeeCCCccCC
Confidence 999995 6665554555 99999999999853
No 392
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=1.5e-11 Score=123.15 Aligned_cols=135 Identities=15% Similarity=0.107 Sum_probs=106.5
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCCCCHHH
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPNGSLAT 452 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 452 (686)
.++.|+.+.||++... +..+++|+...........+.+|+++++.+. |..+.++++++...+..++||||++|.+|.+
T Consensus 21 ~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 99 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE 99 (263)
T ss_dssp CCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred eccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhh
Confidence 4677788999999865 6789999986532223356899999999984 6788899999998888999999999999987
Q ss_pred HhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC-------------------------------------------
Q 042348 453 AIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS------------------------------------------- 489 (686)
Q Consensus 453 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------------- 489 (686)
.+. +......++.+++++|+.||+..
T Consensus 100 ~~~-----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 100 EYE-----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HCC-----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred ccC-----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 632 11234578899999999999821
Q ss_pred -------------CCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 490 -------------PKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 490 -------------~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
+..++|+|++|.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876556799999875
No 393
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.18 E-value=6.2e-11 Score=118.46 Aligned_cols=128 Identities=16% Similarity=0.188 Sum_probs=98.3
Q ss_pred CccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCC--cceeeEEEEecCceeEEEeccCCCCHHHH
Q 042348 376 GKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPN--IVSLRAYFWSVDEKLLIYDYIPNGSLATA 453 (686)
Q Consensus 376 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~ 453 (686)
+.|..+.||++...+|..+++|..... ....+..|+++++.+.+.+ +.+++++....+..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 355669999998877888999997654 2356889999999996544 566888888878889999999998884
Q ss_pred hhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC--------------------------------------------
Q 042348 454 IHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS-------------------------------------------- 489 (686)
Q Consensus 454 l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-------------------------------------------- 489 (686)
... .+ ...++.++++.|+.||+..
T Consensus 104 ~~~---------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 104 SSH---------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp TSC---------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred cCc---------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 211 11 2357778888888888732
Q ss_pred -----------CCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 490 -----------PKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 490 -----------~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
+..++|+|++|.||+++++..+.|+||+.+.
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999877667799999875
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.16 E-value=1.9e-11 Score=126.92 Aligned_cols=89 Identities=19% Similarity=0.200 Sum_probs=56.2
Q ss_pred CCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccc-eecccccccCCCCchhhhccccccc
Q 042348 128 LKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQ-KLDLSFNNLSGLIPNDIANLSRLRL 206 (686)
Q Consensus 128 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~ 206 (686)
+++|+.|+|++|+++...+..|.+|.+|+.|+|.+| ++ .|+...+.++.+|+ .|+|.+ .++.+.+..|.+|++|+.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 556677777766666544556666777777777666 54 45555556666676 777766 566555666666666665
Q ss_pred ccccccccccCCCCCCCcc
Q 042348 207 LAQRVYVDLTYNNLSGLIP 225 (686)
Q Consensus 207 l~~~~~l~l~~N~l~~~~p 225 (686)
+ ++++|+++...+
T Consensus 302 l------~l~~n~i~~I~~ 314 (329)
T 3sb4_A 302 V------LATGDKITTLGD 314 (329)
T ss_dssp E------EECSSCCCEECT
T ss_pred E------EeCCCccCccch
Confidence 4 666676665433
No 395
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=4.6e-13 Score=141.02 Aligned_cols=160 Identities=16% Similarity=0.181 Sum_probs=115.8
Q ss_pred CCEEEEEeCCCCccccCCcCcCC-----CCCCCEEEccCCCCcccCCcccc-CCCCCcEEEccCCCCCCCCcccc-----
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGS-----LSAIGRVNLRNNNFSGSLPVELF-NASNLQSLILSGNSFSGPVPMQI----- 125 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~-----l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~----- 125 (686)
..++.|+|++|.|+..-...|.. .++|+.|+|++|.|+..-...+. .+++|+.|+|++|.|+..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 57889999999998754433332 37999999999999754333333 45789999999999975433333
Q ss_pred cCCCCCCEEeccCCCCCCC----CChhhhhccccccccccccccCCC----CchhhhhcCcccceecccccccCCCC---
Q 042348 126 GKLKYLQVLDLSQNSFSSS----IPSSIVQCKRLKTVVLNQNSFTGP----LPDGFATNLTALQKLDLSFNNLSGLI--- 194 (686)
Q Consensus 126 ~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~~~~--- 194 (686)
...++|+.|+|++|.++.. ++..+..+++|++|+|++|.++.. ++..+ ...++|+.|||++|.|+..-
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L-~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQL-DRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHG-GGCSCCCEEECCSSCCCHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHH-hcCCCcCeEECCCCCCCHHHHHH
Confidence 3468899999999998742 344557789999999999998742 22333 36789999999999998642
Q ss_pred -chhhhcccccccccccccccccCCCCCCC
Q 042348 195 -PNDIANLSRLRLLAQRVYVDLTYNNLSGL 223 (686)
Q Consensus 195 -p~~~~~l~~L~~l~~~~~l~l~~N~l~~~ 223 (686)
+..+...++|+ +|||++|.|+..
T Consensus 231 l~~~L~~~~~L~------~L~Ls~N~i~~~ 254 (372)
T 3un9_A 231 LARAAREHPSLE------LLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHHCSSCC------EEECTTSSCCHH
T ss_pred HHHHHHhCCCCC------EEeccCCCCCHH
Confidence 23333344444 559999998753
No 396
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.05 E-value=4.2e-10 Score=118.20 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=105.8
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcC--CCC-ccchHHHHHHHHHHhccC--CCCcceeeEEEEec---CceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLG--NGG-WQRFKEFQTEAEAIGKIR--HPNIVSLRAYFWSV---DEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~---~~~~lV~e~~ 445 (686)
.++.|.++.||++...+ ..+++|+.. ... ......+.+|+++++.+. +..++++++++.+. +..++||||+
T Consensus 45 ~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v 123 (359)
T 3dxp_A 45 QFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFV 123 (359)
T ss_dssp ECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECC
T ss_pred EcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEec
Confidence 47899999999998764 578888876 332 122357889999999996 45688899888766 4479999999
Q ss_pred CCCCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC------------------------------------
Q 042348 446 PNGSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS------------------------------------ 489 (686)
Q Consensus 446 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------ 489 (686)
+|..+.+... ..++..++..++.++++.|+.||+..
T Consensus 124 ~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 124 SGRVLWDQSL--------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCBCCCCTTC--------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred CCeecCCCcc--------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9877754211 34778888999999999999999731
Q ss_pred -------------------CCCceecCCCCCCeeecCCCC--eEEeecCccccc
Q 042348 490 -------------------PKRYVHGDLRPSNILLGKNME--PHISDFGLARLA 522 (686)
Q Consensus 490 -------------------~~~iiHrDlkp~NILl~~~~~--~kl~DfGla~~~ 522 (686)
+..++|+|++|.||+++.++. +.|+||+.+...
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 246999999999999997753 689999988753
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.05 E-value=1.9e-10 Score=119.30 Aligned_cols=147 Identities=20% Similarity=0.208 Sum_probs=121.1
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccc----------------------------------
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELF---------------------------------- 102 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~---------------------------------- 102 (686)
..++.|+|++ +++..-+..|.++++|+.|+|++|.+....+..|.
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 5788899988 88877777899999999999999976311111110
Q ss_pred --------------------------------------------CCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccC
Q 042348 103 --------------------------------------------NASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQ 138 (686)
Q Consensus 103 --------------------------------------------~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~ 138 (686)
.+++|+.|+|++|+++...+..|.++.+|+.|+|++
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 267999999999999965566799999999999999
Q ss_pred CCCCCCCChhhhhccccc-cccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccc
Q 042348 139 NSFSSSIPSSIVQCKRLK-TVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL 207 (686)
Q Consensus 139 N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 207 (686)
| ++..-+..|.+|.+|+ .|+|.+ +++ .|+...+.++++|+.|+|+.|+++.+.+..|.++++|+.+
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 8 7766678899999999 999988 777 5776666799999999999999999888899999998865
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.99 E-value=1.1e-11 Score=130.44 Aligned_cols=143 Identities=15% Similarity=0.161 Sum_probs=108.4
Q ss_pred CCEEEEEeCCCCccccCCcCc-CCCCCCCEEEccCCCCcccCCccc-----cCCCCCcEEEccCCCCCC----CCccccc
Q 042348 57 GQVFSLIIPNKKLTGFIPADL-GSLSAIGRVNLRNNNFSGSLPVEL-----FNASNLQSLILSGNSFSG----PVPMQIG 126 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l-~~l~~L~~L~L~~N~l~g~~p~~~-----~~l~~L~~L~L~~N~l~g----~~p~~~~ 126 (686)
..++.|+|++|.|+..-...+ ..+++|+.|+|++|.|+..-...+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999976433333 346789999999999975433333 356889999999999974 3555667
Q ss_pred CCCCCCEEeccCCCCCCC----CChhhhhccccccccccccccCCC----CchhhhhcCcccceecccccccCCCCchhh
Q 042348 127 KLKYLQVLDLSQNSFSSS----IPSSIVQCKRLKTVVLNQNSFTGP----LPDGFATNLTALQKLDLSFNNLSGLIPNDI 198 (686)
Q Consensus 127 ~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 198 (686)
.+++|++|+|++|.++.. ++..+..+++|+.|+|++|.++.. ++..+ ...++|++|||++|.|+..-...+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L-~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAA-REHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHH-HHCSSCCEEECTTSSCCHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHH-HhCCCCCEEeccCCCCCHHHHHHH
Confidence 899999999999998742 245567788999999999999742 22222 256899999999999986544444
Q ss_pred hc
Q 042348 199 AN 200 (686)
Q Consensus 199 ~~ 200 (686)
..
T Consensus 260 ~~ 261 (372)
T 3un9_A 260 RD 261 (372)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.99 E-value=1.6e-11 Score=121.57 Aligned_cols=157 Identities=17% Similarity=0.157 Sum_probs=85.9
Q ss_pred CcceeeeEecCC--CEEEEEeCC---CCccccCCc-CcCCCCCCCEEEccCCCCcccCCc-cccCCCCCcE--EEccCCC
Q 042348 46 PCSWNGITCREG--QVFSLIIPN---KKLTGFIPA-DLGSLSAIGRVNLRNNNFSGSLPV-ELFNASNLQS--LILSGNS 116 (686)
Q Consensus 46 ~c~w~gv~c~~~--~~~~l~l~~---n~l~g~~p~-~l~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~--L~L~~N~ 116 (686)
.|.|.|+.|... ++..+...+ ..+.|.+++ .+..|.. .|...+|..++.++- .|...+.|.. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 588999999854 665555544 233333331 2222221 122233333322221 1333344444 5666664
Q ss_pred CC---CCCcccccCCCCCCEEeccCCCCCC--CCChhhhhccccccccccccccCCCCchhhhhcCc--ccceecccccc
Q 042348 117 FS---GPVPMQIGKLKYLQVLDLSQNSFSS--SIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLT--ALQKLDLSFNN 189 (686)
Q Consensus 117 l~---g~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~--~L~~L~Ls~N~ 189 (686)
.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+ ..+. +|+.|+|++|.
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l-~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL-DKIKGLKLEELWLDGNS 231 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG-GGGTTSCCSEEECTTST
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh-hhcccCCcceEEccCCc
Confidence 33 1122222456777788888887776 4456667777888888888877753 122 2333 78888888888
Q ss_pred cCCCCch-------hhhcccccccc
Q 042348 190 LSGLIPN-------DIANLSRLRLL 207 (686)
Q Consensus 190 l~~~~p~-------~~~~l~~L~~l 207 (686)
+.+.+|. .+..+++|+.|
T Consensus 232 l~~~~~~~~~y~~~il~~~P~L~~L 256 (267)
T 3rw6_A 232 LCDTFRDQSTYISAIRERFPKLLRL 256 (267)
T ss_dssp TGGGCSSHHHHHHHHHHHCTTCCEE
T ss_pred CccccCcchhHHHHHHHHCcccCeE
Confidence 8876652 24555555543
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.95 E-value=2.5e-11 Score=136.69 Aligned_cols=180 Identities=15% Similarity=0.073 Sum_probs=125.0
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEcc-----------CCCCccc-CCccccCCCCCcEEEccCCCCCCCCccc
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLR-----------NNNFSGS-LPVELFNASNLQSLILSGNSFSGPVPMQ 124 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~-----------~N~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 124 (686)
.+++.|+|+++-..+.++..+..+++|++|+|+ .|.+++. ++.-+.++++|++|+|+.|++++..+..
T Consensus 318 ~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~ 397 (592)
T 3ogk_B 318 PNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLES 397 (592)
T ss_dssp TTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHH
T ss_pred cCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHH
Confidence 578888888443334445555678889999999 3666643 2222446889999999999998877777
Q ss_pred ccC-CCCCCEEecc----CCCCCCC-----CChhhhhccccccccccc--cccCCCCchhhhhcCcccceecccccccCC
Q 042348 125 IGK-LKYLQVLDLS----QNSFSSS-----IPSSIVQCKRLKTVVLNQ--NSFTGPLPDGFATNLTALQKLDLSFNNLSG 192 (686)
Q Consensus 125 ~~~-l~~L~~L~ls----~N~l~~~-----~p~~~~~l~~L~~L~L~~--N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 192 (686)
++. +++|+.|+|+ .|.+++. ++..+..+++|+.|+|++ |.+++..+..+...+++|+.|+|++|++++
T Consensus 398 l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 398 IGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred HHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 766 8899999996 6778763 344467788999999974 346655555565568889999999998876
Q ss_pred -CCchhhhcccccccccccccccccCCCCCCC-cccc-cccccCCcccccCCC
Q 042348 193 -LIPNDIANLSRLRLLAQRVYVDLTYNNLSGL-IPQN-AALLSLGPTAFIGNP 242 (686)
Q Consensus 193 -~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~-~p~~-~~~~~~~~~~~~~n~ 242 (686)
.++..+..+++|+.| ++++|.+++. ++.. ..+.++..+.+.+|.
T Consensus 478 ~~~~~~~~~~~~L~~L------~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 478 EGLMEFSRGCPNLQKL------EMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHHHHTCCTTCCEE------EEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHHHHhcCcccCee------eccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 334445666666544 8888887643 2322 235566677777776
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.91 E-value=7.6e-11 Score=132.71 Aligned_cols=147 Identities=14% Similarity=0.102 Sum_probs=80.4
Q ss_pred EEEEEeCCCC-ccc-cCCcCcCCCCCCCEEEccCCCCccc----CCccccCCCCCcEEEccCCCCCC----CCcccccCC
Q 042348 59 VFSLIIPNKK-LTG-FIPADLGSLSAIGRVNLRNNNFSGS----LPVELFNASNLQSLILSGNSFSG----PVPMQIGKL 128 (686)
Q Consensus 59 ~~~l~l~~n~-l~g-~~p~~l~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g----~~p~~~~~l 128 (686)
++.|+|+++. ++. .++..+..+++|++|+|++|.+++. ++..+.++++|++|+|++|.+++ .++..+..+
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 6666666654 111 1122223556666666666666543 22233455666666666666652 233344456
Q ss_pred CCCCEEeccCCCCCCCCChhhhhcccccccccccccc--------------------------CCCCchhhhhcCcccce
Q 042348 129 KYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSF--------------------------TGPLPDGFATNLTALQK 182 (686)
Q Consensus 129 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l--------------------------~~~~p~~~~~~l~~L~~ 182 (686)
++|+.|+|++|.+.+ +|..+..+++|+.|+++.+.. .+.+|..+ ..+++|++
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~-~~~~~L~~ 297 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILF-PFAAQIRK 297 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGG-GGGGGCCE
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHH-hhcCCCcE
Confidence 666666666666653 455555555555555543211 12344433 46788899
Q ss_pred ecccccccCCCCc-hhhhcccccccc
Q 042348 183 LDLSFNNLSGLIP-NDIANLSRLRLL 207 (686)
Q Consensus 183 L~Ls~N~l~~~~p-~~~~~l~~L~~l 207 (686)
|+|++|.+++... ..+..+++|+.|
T Consensus 298 L~Ls~~~l~~~~~~~~~~~~~~L~~L 323 (592)
T 3ogk_B 298 LDLLYALLETEDHCTLIQKCPNLEVL 323 (592)
T ss_dssp EEETTCCCCHHHHHHHHTTCTTCCEE
T ss_pred EecCCCcCCHHHHHHHHHhCcCCCEE
Confidence 9999888765433 234556665544
No 402
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=1.1e-09 Score=112.20 Aligned_cols=197 Identities=15% Similarity=0.135 Sum_probs=122.8
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhcc-CCCC--cceeeEEEEecC---ceeEEEeccCC
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKI-RHPN--IVSLRAYFWSVD---EKLLIYDYIPN 447 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~n--Iv~l~~~~~~~~---~~~lV~e~~~~ 447 (686)
.++.|....||++. ..+++|..... .....+.+|+++++.+ .+.. +.+.+......+ ..|+|||+++|
T Consensus 27 ~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 27 ISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp EEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred ecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 47889999999863 45888886542 2346789999999888 3333 345555443333 34899999999
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccC--------------------------------------
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVS-------------------------------------- 489 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-------------------------------------- 489 (686)
.+|.+... ..++..++..++.++++.|+.||+..
T Consensus 101 ~~l~~~~~--------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 101 VPLTPLLL--------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp EECCHHHH--------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred eECCcccc--------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 88875432 23677788888889999888888611
Q ss_pred -----------------CCCceecCCCCCCeeecC--CCCeEEeecCcccccccccCCccccccccccCCCCCCCccccc
Q 042348 490 -----------------PKRYVHGDLRPSNILLGK--NMEPHISDFGLARLADIAEETPEVHWEQSTTGTPLQSSPYEFT 550 (686)
Q Consensus 490 -----------------~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 550 (686)
+..++|+|++|.||++++ ...+.|+||+.+....... +........ ....+.
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~---Dl~~~~~~~---~~~~~~--- 243 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN---DFISLMEDD---EEYGME--- 243 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH---HHHTTCCTT---TSCCHH---
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH---HHHHHHhhc---cccCHH---
Confidence 134799999999999998 4567899999887543211 000000000 000000
Q ss_pred cccCCCCCccccC-cccccCCCCCCcchHHHHHHHHHHHHhCCCCc
Q 042348 551 ALNSTTSRSYYQA-PEASKVRKPTQKWDIYSYGVILLEMISGKLPM 595 (686)
Q Consensus 551 ~~~~~~gt~~y~a-PE~~~~~~~~~~sDVwSlGvvl~elltG~~P~ 595 (686)
........+++.. |+.... .....+.|++|.++|.+.+|..+|
T Consensus 244 ~~~~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 244 FVSKILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0000000111222 232211 122368999999999999999887
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.73 E-value=3.9e-10 Score=126.92 Aligned_cols=127 Identities=18% Similarity=0.173 Sum_probs=81.1
Q ss_pred CCEEEEEeCCCCccccCCcCcC-CCCCCCEEEccCC-CCccc-CCccccCCCCCcEEEccCCCCCCCCccccc----CCC
Q 042348 57 GQVFSLIIPNKKLTGFIPADLG-SLSAIGRVNLRNN-NFSGS-LPVELFNASNLQSLILSGNSFSGPVPMQIG----KLK 129 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~-~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~----~l~ 129 (686)
.+++.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4677788888877776666665 5778888888877 44422 344444677888888888877654444333 566
Q ss_pred CCCEEeccCCCCCCCCC-h----hhhhcccccccccccc-ccCCCCchhhhhcCcccceecccc
Q 042348 130 YLQVLDLSQNSFSSSIP-S----SIVQCKRLKTVVLNQN-SFTGPLPDGFATNLTALQKLDLSF 187 (686)
Q Consensus 130 ~L~~L~ls~N~l~~~~p-~----~~~~l~~L~~L~L~~N-~l~~~~p~~~~~~l~~L~~L~Ls~ 187 (686)
+|+.|+|++|. . .++ . .+..+++|+.|+|++| .+++ +|..+ ..+++|+.|+++.
T Consensus 185 ~L~~L~l~~~~-~-~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~-~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 185 SLVSLNISCLA-S-EVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLL-QRAPQLEELGTGG 244 (594)
T ss_dssp CCCEEECTTCC-S-CCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHH-HHCTTCSEEECSB
T ss_pred cCcEEEecccC-C-cCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHH-hcCCcceEccccc
Confidence 78888888776 1 222 2 2344578888888777 3433 44444 4677777777443
No 404
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.71 E-value=4.5e-10 Score=126.44 Aligned_cols=179 Identities=12% Similarity=0.149 Sum_probs=107.5
Q ss_pred CCEEEEEeCCCCcccc-CCcCcCCCCCCCEEEc---------cCCCCcccCCcccc-CCCCCcEEEccCCCCCCCCcccc
Q 042348 57 GQVFSLIIPNKKLTGF-IPADLGSLSAIGRVNL---------RNNNFSGSLPVELF-NASNLQSLILSGNSFSGPVPMQI 125 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~-~p~~l~~l~~L~~L~L---------~~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~ 125 (686)
.+++.|+|++| ++.. ++.-...+++|+.|+| +.|.+++.....+. ++++|+.|.++.|.+++..+..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 57888888877 4432 2222335778888888 33555533222332 47788888888888876555555
Q ss_pred c-CCCCCCEEecc--C----CCCCCCC-----ChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCC
Q 042348 126 G-KLKYLQVLDLS--Q----NSFSSSI-----PSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGL 193 (686)
Q Consensus 126 ~-~l~~L~~L~ls--~----N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~ 193 (686)
. .+++|+.|+|+ + |.+++.. +..+..+++|+.|+|++ .+++..+..+...+++|+.|+|++|.+++.
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 4 47888888888 4 5555321 12256677888888866 555444444443477788888888887654
Q ss_pred Cchhh-hcccccccccccccccccCCCCCCCccc-c-cccccCCcccccCCCC
Q 042348 194 IPNDI-ANLSRLRLLAQRVYVDLTYNNLSGLIPQ-N-AALLSLGPTAFIGNPF 243 (686)
Q Consensus 194 ~p~~~-~~l~~L~~l~~~~~l~l~~N~l~~~~p~-~-~~~~~~~~~~~~~n~~ 243 (686)
.+..+ ..+++|+. |++++|.+++.... . ..+.++..+.+.+|+.
T Consensus 472 ~~~~l~~~~~~L~~------L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 472 GMHHVLSGCDSLRK------LEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHHHCTTCCE------EEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHhcCCCcCE------EECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 44433 44555544 47888877543222 1 1244555666666654
No 405
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.64 E-value=6.3e-08 Score=102.76 Aligned_cols=143 Identities=14% Similarity=0.185 Sum_probs=84.9
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEecc
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLS 137 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 137 (686)
.++.+.|++ .++..-+..|.++++|+.++|++|+++ .+|...+..++|+.+.|.+| ++..-...|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 466677764 666555667777888888888877777 44443334577777777644 553445566777777777776
Q ss_pred CCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccC-----CCCchhhhcccccccc
Q 042348 138 QNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLS-----GLIPNDIANLSRLRLL 207 (686)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~l 207 (686)
.| ++..-...|.+ .+|+.+.| .|.++ .|+...+.++++|+.++|.+|.+. .+.+..|.+|++|+.+
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l 305 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARF 305 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEE
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeE
Confidence 54 34233334444 45555555 33344 344444456666666666666554 3344556666655544
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.63 E-value=7.4e-09 Score=107.99 Aligned_cols=161 Identities=16% Similarity=0.170 Sum_probs=100.0
Q ss_pred CCEEEEEeCCCCcc---------ccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCccccc-
Q 042348 57 GQVFSLIIPNKKLT---------GFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIG- 126 (686)
Q Consensus 57 ~~~~~l~l~~n~l~---------g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~- 126 (686)
.+++.|.+..+... +.++..+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..+.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 47778888665431 124445567789999999887311 2343 3 378899999998887644333443
Q ss_pred -CCCCCCEEeccC--CCCCCCC-----Chhh--hhccccccccccccccCCCCchhhh--hcCcccceecccccccCCCC
Q 042348 127 -KLKYLQVLDLSQ--NSFSSSI-----PSSI--VQCKRLKTVVLNQNSFTGPLPDGFA--TNLTALQKLDLSFNNLSGLI 194 (686)
Q Consensus 127 -~l~~L~~L~ls~--N~l~~~~-----p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~--~~l~~L~~L~Ls~N~l~~~~ 194 (686)
.+++|+.|+|+. |...+.. ...+ ..+++|++|+|.+|.++...+..++ ..+++|++|||+.|.|++.-
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 688999998863 3322211 1112 2468899999998888743333333 24788999999999988643
Q ss_pred chhhhcccccccccccccccccCCCCCC
Q 042348 195 PNDIANLSRLRLLAQRVYVDLTYNNLSG 222 (686)
Q Consensus 195 p~~~~~l~~L~~l~~~~~l~l~~N~l~~ 222 (686)
+..+.. .|..++.+..|+|++|.++.
T Consensus 296 ~~~L~~--~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 296 ARLLLD--HVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HHHHHT--THHHHTTCSEEECCSBBCCH
T ss_pred HHHHHh--hcccCCcceEEECCCCcCCH
Confidence 222211 12223334456899888764
No 407
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.63 E-value=1.3e-07 Score=97.33 Aligned_cols=132 Identities=17% Similarity=0.161 Sum_probs=99.1
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCC----CCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRH----PNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.++.|....||++ +..+++|+.... .....+.+|.+++..+.+ ..+.+++++ +..++||||++|.+
T Consensus 44 ~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 44 YLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred eCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 5789999999998 567888876442 223568899999988865 224455554 57799999999988
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCC---------------------------------------
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSP--------------------------------------- 490 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~--------------------------------------- 490 (686)
+.+... ..++..++..++.++++.|+.||+...
T Consensus 114 l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
T 3r70_A 114 ITYEQY--------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM 185 (320)
T ss_dssp CCHHHH--------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred cccccc--------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence 874332 236677778888888888888885322
Q ss_pred ---------------------CCceecCCCCCCeeecCCCCeEEeecCcccccc
Q 042348 491 ---------------------KRYVHGDLRPSNILLGKNMEPHISDFGLARLAD 523 (686)
Q Consensus 491 ---------------------~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 523 (686)
..++|+|++|.||+++.+..+.|+||+.+....
T Consensus 186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 234999999999999986667999999986543
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.55 E-value=1.2e-08 Score=100.91 Aligned_cols=106 Identities=26% Similarity=0.310 Sum_probs=76.9
Q ss_pred cCCCCCCCE--EEccCCCCc---ccCCccccCCCCCcEEEccCCCCCC--CCcccccCCCCCCEEeccCCCCCCCCChhh
Q 042348 77 LGSLSAIGR--VNLRNNNFS---GSLPVELFNASNLQSLILSGNSFSG--PVPMQIGKLKYLQVLDLSQNSFSSSIPSSI 149 (686)
Q Consensus 77 l~~l~~L~~--L~L~~N~l~---g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 149 (686)
|...+.|.. ++++.|+.. +.++....++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455554 677788543 2223223568899999999999987 4567778899999999999999864 345
Q ss_pred hhcc--ccccccccccccCCCCch------hhhhcCcccceec
Q 042348 150 VQCK--RLKTVVLNQNSFTGPLPD------GFATNLTALQKLD 184 (686)
Q Consensus 150 ~~l~--~L~~L~L~~N~l~~~~p~------~~~~~l~~L~~L~ 184 (686)
..+. +|++|+|++|.+++.+|. .+...+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 5555 899999999999877763 2345788999887
No 409
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.53 E-value=1.4e-07 Score=100.04 Aligned_cols=173 Identities=12% Similarity=0.121 Sum_probs=128.6
Q ss_pred CCEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEec
Q 042348 57 GQVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDL 136 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 136 (686)
..++.++|++|+++..-...|. .++|+.+.|.+| +...-..+|.++++|+.++|..| ++..-..+|.+ .+|+.+.|
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 4788999999999976666666 689999999855 76566778899999999999876 55344455666 78999999
Q ss_pred cCCCCCCCCChhhhhccccccccccccccC----CCCchhhhhcCcccceecccccccCCCCchhhhccccccccccccc
Q 042348 137 SQNSFSSSIPSSIVQCKRLKTVVLNQNSFT----GPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLLAQRVY 212 (686)
Q Consensus 137 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~ 212 (686)
.|.++..-+..|.+|.+|+.+.+.+|.+. ..|+...+.++++|+.++|. |.++.+-...|.+|.+|+.+
T Consensus 256 -p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l----- 328 (401)
T 4fdw_A 256 -PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQL----- 328 (401)
T ss_dssp -ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEE-----
T ss_pred -CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEE-----
Confidence 45677556788999999999999888764 13666667789999999998 55877777788888888766
Q ss_pred ccccCCCCCCCcccccccccCCcccccCCC
Q 042348 213 VDLTYNNLSGLIPQNAALLSLGPTAFIGNP 242 (686)
Q Consensus 213 l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 242 (686)
+|..| ++..-+..+...++..+.+.+|.
T Consensus 329 -~lp~~-l~~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 329 -TIPAN-VTQINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp -EECTT-CCEECTTSSSSSCCCEEEECCSS
T ss_pred -EECcc-ccEEcHHhCCCCCCCEEEEcCCC
Confidence 66443 55444444443356666666663
No 410
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.51 E-value=3.7e-07 Score=92.18 Aligned_cols=73 Identities=15% Similarity=0.194 Sum_probs=59.5
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCC---CcceeeEEEEecCceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHP---NIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.|+.|.++.||++...+|+.++||+...........|..|++.|+.+.+. .+++++++. ..++||||++++++
T Consensus 22 ~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~~ 97 (288)
T 3d1u_A 22 ERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERPP 97 (288)
T ss_dssp EEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCCC
T ss_pred eeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCCC
Confidence 48999999999999988999999997544333346789999999999765 577887763 47999999999875
No 411
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.48 E-value=8.8e-07 Score=90.41 Aligned_cols=135 Identities=21% Similarity=0.145 Sum_probs=95.7
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCC---CcceeeEEEE-ecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHP---NIVSLRAYFW-SVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~-~~~~~~lV~e~~~~gs 449 (686)
.++.|....||+. +..+++|.... ......+.+|.++|..+.+. .+.+.+.++. ..+..++||||++|.+
T Consensus 26 ~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 26 SLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred ecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 4678888899988 46688888532 22346789999999999652 3566777764 3456789999999988
Q ss_pred HHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHcc-----------------------------------------
Q 042348 450 LATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEV----------------------------------------- 488 (686)
Q Consensus 450 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~----------------------------------------- 488 (686)
+.+..- ..++..++..++.++++.|+.||+.
T Consensus 100 l~~~~~--------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 100 LGEDGM--------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp CHHHHH--------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred Cchhhh--------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 876322 1245555566666666666666642
Q ss_pred ----------------CCCCceecCCCCCCeeecC---CCCe-EEeecCccccc
Q 042348 489 ----------------SPKRYVHGDLRPSNILLGK---NMEP-HISDFGLARLA 522 (686)
Q Consensus 489 ----------------~~~~iiHrDlkp~NILl~~---~~~~-kl~DfGla~~~ 522 (686)
.+..++|+|++|.||+++. ++.+ .|+||+.+...
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235699999999999987 4554 89999988643
No 412
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.46 E-value=7.9e-07 Score=88.98 Aligned_cols=133 Identities=14% Similarity=0.190 Sum_probs=96.7
Q ss_pred cCccCce-EEEEEEeC-CCceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 375 LGKSTIG-IVYKVALN-NEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 375 iG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
+..|..| .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 3345444 68988765 4567888986543 3456888999998884 334778899999999999999999998887
Q ss_pred HHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHcc-------------------------------------------
Q 042348 452 TAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEV------------------------------------------- 488 (686)
Q Consensus 452 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~------------------------------------------- 488 (686)
+..... ......++.+++..|+-||..
T Consensus 109 ~~~~~~----------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 109 QVLEEY----------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHC----------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccCC----------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 765321 223445666777777777751
Q ss_pred ------------CCCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 489 ------------SPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 489 ------------~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
.+..++|+|+.+.||++++++.+-|+||+.+.
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237999999999999987777799999875
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=3.4e-08 Score=92.86 Aligned_cols=118 Identities=15% Similarity=0.198 Sum_probs=69.4
Q ss_pred CCcCcCCCCCCCEEEccCC-CCccc----CCccccCCCCCcEEEccCCCCCCC----CcccccCCCCCCEEeccCCCCCC
Q 042348 73 IPADLGSLSAIGRVNLRNN-NFSGS----LPVELFNASNLQSLILSGNSFSGP----VPMQIGKLKYLQVLDLSQNSFSS 143 (686)
Q Consensus 73 ~p~~l~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~~ 143 (686)
+...+...+.|++|+|++| .|... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3344566677777777777 66522 334455667777777777777531 33445555677777777777763
Q ss_pred C----CChhhhhccccccccc--cccccCCC----CchhhhhcCcccceecccccccC
Q 042348 144 S----IPSSIVQCKRLKTVVL--NQNSFTGP----LPDGFATNLTALQKLDLSFNNLS 191 (686)
Q Consensus 144 ~----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~ 191 (686)
. +...+...++|++|+| ++|.++.. +...+ ...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L-~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANML-EKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHH-HHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHH-HhCCCcCEEeccCCCCC
Confidence 2 2334445566777777 66666521 11111 23456777777777664
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.36 E-value=5.4e-08 Score=101.41 Aligned_cols=161 Identities=14% Similarity=0.139 Sum_probs=105.7
Q ss_pred CCEEEEEeCCCCccc-c-------CCcCcCCCCCCCEEEccCCCCc---------ccCCccccCCCCCcEEEccCCCCCC
Q 042348 57 GQVFSLIIPNKKLTG-F-------IPADLGSLSAIGRVNLRNNNFS---------GSLPVELFNASNLQSLILSGNSFSG 119 (686)
Q Consensus 57 ~~~~~l~l~~n~l~g-~-------~p~~l~~l~~L~~L~L~~N~l~---------g~~p~~~~~l~~L~~L~L~~N~l~g 119 (686)
.+|+.|.+......| . +..++..+++|+.|.+..+... +.++..+..+|+|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 467788887655543 1 2344567889999999776432 234455667899999999998411
Q ss_pred CCcccccCCCCCCEEeccCCCCCCCCChhhh--hccccccccccc--cccCCC-----Cchhhh-hcCcccceecccccc
Q 042348 120 PVPMQIGKLKYLQVLDLSQNSFSSSIPSSIV--QCKRLKTVVLNQ--NSFTGP-----LPDGFA-TNLTALQKLDLSFNN 189 (686)
Q Consensus 120 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~~-~~l~~L~~L~Ls~N~ 189 (686)
.++. + .+++|+.|+|..+.++......+. .+++|+.|+|+. |...+. +...+. ..+++|++|+|++|.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2343 4 389999999999887644334444 689999999863 332221 111111 247899999999999
Q ss_pred cCCCCchhhhcccccccccccccccccCCCCCCC
Q 042348 190 LSGLIPNDIANLSRLRLLAQRVYVDLTYNNLSGL 223 (686)
Q Consensus 190 l~~~~p~~~~~l~~L~~l~~~~~l~l~~N~l~~~ 223 (686)
+.+..+..+...+ .++++..|||++|.++..
T Consensus 264 i~~~~~~~la~a~---~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 264 EQNVVVEMFLESD---ILPQLETMDISAGVLTDE 294 (362)
T ss_dssp THHHHHHHHHHCS---SGGGCSEEECCSSCCBHH
T ss_pred CchHHHHHHHhCc---cCCCCCEEECCCCCCChH
Confidence 9865555554322 223445669999999863
No 415
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.35 E-value=1.3e-06 Score=91.28 Aligned_cols=72 Identities=8% Similarity=-0.017 Sum_probs=55.0
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCC--cceeeEEEEec-CceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPN--IVSLRAYFWSV-DEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~-~~~~lV~e~~~~gsL 450 (686)
.++.|....+|+... ++..+++|..... ..+..|+.++..+.... +.++++++... +..++||||++|.++
T Consensus 48 ~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 48 QLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred ECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 478899999999886 4678899987542 35889999999886533 56777777654 568999999998665
Q ss_pred H
Q 042348 451 A 451 (686)
Q Consensus 451 ~ 451 (686)
.
T Consensus 122 ~ 122 (362)
T 3ovc_A 122 Q 122 (362)
T ss_dssp T
T ss_pred c
Confidence 4
No 416
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.34 E-value=9.3e-07 Score=92.39 Aligned_cols=79 Identities=8% Similarity=-0.009 Sum_probs=56.3
Q ss_pred cc-CccCceEEEEEEeC-------CCceEEEEEcCCCC---ccchHHHHHHHHHHhccC-C--CCcceeeEEEEec---C
Q 042348 374 LL-GKSTIGIVYKVALN-------NEEAVAVRRLGNGG---WQRFKEFQTEAEAIGKIR-H--PNIVSLRAYFWSV---D 436 (686)
Q Consensus 374 ~i-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~---~ 436 (686)
.| +.|....+|+.... ++..+++|+..... ......+.+|+.+++.+. + -.+.++++++.+. +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 46 78889999998765 25678888865432 112256788999999884 3 3577888887655 3
Q ss_pred ceeEEEeccCCCCHHH
Q 042348 437 EKLLIYDYIPNGSLAT 452 (686)
Q Consensus 437 ~~~lV~e~~~~gsL~~ 452 (686)
..++||||++|..+.+
T Consensus 107 ~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 107 TPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SCEEEEECCCCBCCCB
T ss_pred CceEEEEecCCCChhh
Confidence 5689999999876653
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.27 E-value=1.1e-07 Score=89.44 Aligned_cols=111 Identities=13% Similarity=0.103 Sum_probs=88.9
Q ss_pred CCCEEEEEeCCC-Ccccc----CCcCcCCCCCCCEEEccCCCCccc----CCccccCCCCCcEEEccCCCCCCC----Cc
Q 042348 56 EGQVFSLIIPNK-KLTGF----IPADLGSLSAIGRVNLRNNNFSGS----LPVELFNASNLQSLILSGNSFSGP----VP 122 (686)
Q Consensus 56 ~~~~~~l~l~~n-~l~g~----~p~~l~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p 122 (686)
...++.|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 467999999999 88753 455677789999999999999742 344556668899999999999843 56
Q ss_pred ccccCCCCCCEEec--cCCCCCCC----CChhhhhccccccccccccccC
Q 042348 123 MQIGKLKYLQVLDL--SQNSFSSS----IPSSIVQCKRLKTVVLNQNSFT 166 (686)
Q Consensus 123 ~~~~~l~~L~~L~l--s~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 166 (686)
..+...++|+.|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 67788899999999 88999843 2344556689999999999986
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.02 E-value=3.2e-05 Score=79.95 Aligned_cols=142 Identities=17% Similarity=0.208 Sum_probs=80.9
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccC--CCCcceeeE------EEEecCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR--HPNIVSLRA------YFWSVDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~------~~~~~~~~~lV~e~~ 445 (686)
.|+.|..+.||++...++. +++|+.... ..++..|.+++..+. .-.+++++. +....+..++||||+
T Consensus 39 ~l~gG~~n~~~~v~~~~~~-~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSGA-VCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTEE-EEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCCC-EEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 3666778999999887654 889988752 234445666665553 112333333 123456678999999
Q ss_pred CCCCHH--------------HHhhcCCCcc--c------cCCCCHHHH-------------------------------H
Q 042348 446 PNGSLA--------------TAIHGKAGII--S------YRPLSWSDR-------------------------------L 472 (686)
Q Consensus 446 ~~gsL~--------------~~l~~~~~~~--~------~~~l~~~~~-------------------------------~ 472 (686)
+|..+. ..+|...... . ...-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 1122111000 0 001123221 0
Q ss_pred HHHHHHHHHHHHHHc----------cCCCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 473 RIIKGVAKGIAFLHE----------VSPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 473 ~i~~~ia~gL~~LH~----------~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
.+..++..++++|++ ..+..++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111224445666653 123689999999999999888899999999775
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.99 E-value=2.3e-05 Score=82.99 Aligned_cols=73 Identities=8% Similarity=0.152 Sum_probs=49.0
Q ss_pred ccCccCceEEEEEEeC-CCceEEEEEcCCCCc-------cchHHHHHHHHHHhccCC--CC-cceeeEEEEecCceeEEE
Q 042348 374 LLGKSTIGIVYKVALN-NEEAVAVRRLGNGGW-------QRFKEFQTEAEAIGKIRH--PN-IVSLRAYFWSVDEKLLIY 442 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~n-Iv~l~~~~~~~~~~~lV~ 442 (686)
.||.|.++.||++... +++.++||....... ....++..|.++++.+.. +. +.+++.+ +.+..++||
T Consensus 37 ~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lvm 114 (397)
T 2olc_A 37 EIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVM 114 (397)
T ss_dssp ECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEE
T ss_pred ECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEEE
Confidence 5899999999999754 467899997643211 123567889999988742 33 4455543 455678999
Q ss_pred eccCCC
Q 042348 443 DYIPNG 448 (686)
Q Consensus 443 e~~~~g 448 (686)
||+++.
T Consensus 115 E~l~g~ 120 (397)
T 2olc_A 115 EDLSHL 120 (397)
T ss_dssp CCCTTS
T ss_pred EeCCCc
Confidence 999764
No 420
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.83 E-value=7.7e-05 Score=75.15 Aligned_cols=72 Identities=17% Similarity=0.246 Sum_probs=54.2
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccC-C--CCcceeeEEEEecCceeEEEeccCCCC
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-H--PNIVSLRAYFWSVDEKLLIYDYIPNGS 449 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~~~~~lV~e~~~~gs 449 (686)
.+|.|..+.||+.+..+|+.|++|+...........|..|++.|+.+. . --+++.+++ +..++||||++++.
T Consensus 22 ~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 22 ERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred ecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 378999999999999999999999876554444456889999999884 2 234455544 24589999998764
No 421
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.70 E-value=0.00016 Score=73.42 Aligned_cols=139 Identities=14% Similarity=0.142 Sum_probs=90.8
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccC---CCCcceeeEEEEecCceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR---HPNIVSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.|+.|....+|+.... +..+++|+.... ....+..|.+.|+.+. ...+++.++++...+..++||||+++..+
T Consensus 43 ~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 43 KLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 4788999999999864 667888886542 2467889999998883 36688899988888889999999998764
Q ss_pred H-----------HHhhcCCC--ccc--------------cCCCCHHHHH---HHHH----------------HHHHHH-H
Q 042348 451 A-----------TAIHGKAG--IIS--------------YRPLSWSDRL---RIIK----------------GVAKGI-A 483 (686)
Q Consensus 451 ~-----------~~l~~~~~--~~~--------------~~~l~~~~~~---~i~~----------------~ia~gL-~ 483 (686)
. ..||.... ... ...-+|.+.. ++.. .++..+ .
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 2 12333211 000 0012454321 1111 111111 2
Q ss_pred HHHc-cCCCCceecCCCCCCeeecCCCCeEEeecC
Q 042348 484 FLHE-VSPKRYVHGDLRPSNILLGKNMEPHISDFG 517 (686)
Q Consensus 484 ~LH~-~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 517 (686)
.|.. ..+..++|+|+.+.|++++.++ +.|.|+.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3321 1235799999999999999887 8999984
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.63 E-value=0.00017 Score=76.89 Aligned_cols=71 Identities=10% Similarity=0.155 Sum_probs=44.2
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCC------CC-c--cchHHHHHHHHHHh-ccCCCCcceeeEEEEecCceeEEEe
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGN------GG-W--QRFKEFQTEAEAIG-KIRHPNIVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~------~~-~--~~~~~~~~E~~~l~-~l~H~nIv~l~~~~~~~~~~~lV~e 443 (686)
.||.|..+.||++.. ++..++||.... .. . .....++.|+..+. ......+++++.+. .+..++|||
T Consensus 41 ~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~e 117 (420)
T 2pyw_A 41 EVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGMR 117 (420)
T ss_dssp ECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEEC
T ss_pred EccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEEe
Confidence 478999999999965 467899994321 11 0 12233444443332 22234566777665 567799999
Q ss_pred cc-CC
Q 042348 444 YI-PN 447 (686)
Q Consensus 444 ~~-~~ 447 (686)
|+ ++
T Consensus 118 ~l~~g 122 (420)
T 2pyw_A 118 YLEPP 122 (420)
T ss_dssp CCCTT
T ss_pred ecCCc
Confidence 99 76
No 423
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.48 E-value=0.00031 Score=71.13 Aligned_cols=69 Identities=13% Similarity=0.184 Sum_probs=44.1
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCCc-ceeeEEEEecCceeEEEecc-CCCCH
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNI-VSLRAYFWSVDEKLLIYDYI-PNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~e~~-~~gsL 450 (686)
.|+.|....+|++ ..+++|+....... .....+|+.+++.+....+ .+++++ +.+..++|+||+ ++.++
T Consensus 25 ~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 25 ERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred EcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 4788999999998 45888887654221 1234568888887743233 455544 344568999999 65444
No 424
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.39 E-value=0.00027 Score=74.65 Aligned_cols=113 Identities=16% Similarity=0.251 Sum_probs=76.5
Q ss_pred CCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhc
Q 042348 73 IPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQC 152 (686)
Q Consensus 73 ~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 152 (686)
-...|.++..|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-..+|.+|
T Consensus 257 ~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 257 ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred ccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 3446777778888887766543 445667778888888875 3444344456777788888888654 554445677778
Q ss_pred cccccccccccccCCCCchhhhhcCcccceeccccccc
Q 042348 153 KRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNL 190 (686)
Q Consensus 153 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l 190 (686)
.+|+.+.|..+ ++ .|....+.++++|+.+++.+|..
T Consensus 334 ~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 334 EQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 88888888644 55 56666666788888888777654
No 425
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.35 E-value=0.00048 Score=70.42 Aligned_cols=144 Identities=10% Similarity=0.055 Sum_probs=80.4
Q ss_pred ccCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCCC--cceeeEE------EEecCceeEEEecc
Q 042348 374 LLGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPN--IVSLRAY------FWSVDEKLLIYDYI 445 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~------~~~~~~~~lV~e~~ 445 (686)
.|+.|....+|++...++ .+++|...... ....+..|+.++..+.... +.+++.. ....+..+++|+|+
T Consensus 29 ~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred ccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 367788899999987766 58889886531 2245667888887774212 3333321 12235568999999
Q ss_pred CCCCHHH--------------HhhcCCCcccc------CCCCHHHHHH------------HHHHHHHHHHHHHcc----C
Q 042348 446 PNGSLAT--------------AIHGKAGIISY------RPLSWSDRLR------------IIKGVAKGIAFLHEV----S 489 (686)
Q Consensus 446 ~~gsL~~--------------~l~~~~~~~~~------~~l~~~~~~~------------i~~~ia~gL~~LH~~----~ 489 (686)
+|..+.. .+|........ ....|..... +...+...++++++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 8865321 12211100000 0011322110 011244455666532 2
Q ss_pred CCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 490 PKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 490 ~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
+..++|+|+.+.||+++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3579999999999999887656899999775
No 426
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.32 E-value=0.00058 Score=72.81 Aligned_cols=71 Identities=15% Similarity=0.155 Sum_probs=48.6
Q ss_pred ccCccCceEEEEEEeCC--------CceEEEEEcCCCCccchHHHHHHHHHHhccCCCC-cceeeEEEEecCceeEEEec
Q 042348 374 LLGKSTIGIVYKVALNN--------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPN-IVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~~lV~e~ 444 (686)
.|+.|....||++...+ +..+++|+..... ....+..|..+++.+...+ .+++++.+.+ .+||||
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 47788889999998753 4678888874421 1145668999998884333 3667766532 389999
Q ss_pred cCCCCH
Q 042348 445 IPNGSL 450 (686)
Q Consensus 445 ~~~gsL 450 (686)
++|.++
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986443
No 427
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.30 E-value=0.00066 Score=70.79 Aligned_cols=142 Identities=20% Similarity=0.273 Sum_probs=83.8
Q ss_pred ccCccCceEEEEEEeCC--------CceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEec
Q 042348 374 LLGKSTIGIVYKVALNN--------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
.+..|-...+|++...+ ++.+++|+.... ........+|.++++.+. +.-..++++++.+ .+||||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 36677888899988752 467888886432 233456778999998884 3334667766543 299999
Q ss_pred cCCCCHHHH-----------------hhcCCCccccCCC-CHHHHHHHHHHHHH-------------------HHHHHHc
Q 042348 445 IPNGSLATA-----------------IHGKAGIISYRPL-SWSDRLRIIKGVAK-------------------GIAFLHE 487 (686)
Q Consensus 445 ~~~gsL~~~-----------------l~~~~~~~~~~~l-~~~~~~~i~~~ia~-------------------gL~~LH~ 487 (686)
++|.+|..- +|.........+. -|.++.++..++.. .++.|.+
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 998654311 1221110010111 24555555544422 2333332
Q ss_pred -----cCCCCceecCCCCCCeeecCC----CCeEEeecCccc
Q 042348 488 -----VSPKRYVHGDLRPSNILLGKN----MEPHISDFGLAR 520 (686)
Q Consensus 488 -----~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~ 520 (686)
..+..++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 123468999999999999876 789999999886
No 428
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.29 E-value=0.0012 Score=70.62 Aligned_cols=72 Identities=15% Similarity=0.165 Sum_probs=47.3
Q ss_pred ccCccCceEEEEEEeCC-CceEEEEEcCCCCccchHHHHHHHHHHhccCCCCc-ceeeEEEEecCceeEEEeccCCCCH
Q 042348 374 LLGKSTIGIVYKVALNN-EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPNI-VSLRAYFWSVDEKLLIYDYIPNGSL 450 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~e~~~~gsL 450 (686)
.|+.|-...+|++...+ +..+++|+...... ..-+-.+|..++..+...++ .++++++. + .+||||++|.+|
T Consensus 115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 115 IINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 47788889999998875 46788888754321 11223689999998865444 56777662 2 359999987544
No 429
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.22 E-value=0.0015 Score=67.10 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=74.0
Q ss_pred cCccCceE-EEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCC--CCcceeeEEEEecCceeEEEeccCCCCHH
Q 042348 375 LGKSTIGI-VYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRH--PNIVSLRAYFWSVDEKLLIYDYIPNGSLA 451 (686)
Q Consensus 375 iG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 451 (686)
|+.|.... +|+....++..+++|....... ..+..|+.++..+.. -.+.+++.+.. +.-++|||++.+..+.
T Consensus 26 l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g~ll~e~l~~~~l~ 100 (333)
T 3csv_A 26 LAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEH--ARGLLLIEDLGDALFT 100 (333)
T ss_dssp --------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEET--TTTEEEECCCCSCBHH
T ss_pred CCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecC--CCCEEEEeeCCCcchH
Confidence 44554444 6677654466777776544321 334567777777632 23556666532 2337899999877776
Q ss_pred HHhhcCCCc--------------------cccCCCCHHHHH-------HH-------------HHHHHHHHHHHH---cc
Q 042348 452 TAIHGKAGI--------------------ISYRPLSWSDRL-------RI-------------IKGVAKGIAFLH---EV 488 (686)
Q Consensus 452 ~~l~~~~~~--------------------~~~~~l~~~~~~-------~i-------------~~~ia~gL~~LH---~~ 488 (686)
+++...... .....++..... .+ ...+...++.+. ..
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~ 180 (333)
T 3csv_A 101 EVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLE 180 (333)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccc
Confidence 554321100 000111111100 00 011112222221 11
Q ss_pred CCCCceecCCCCCCeeecCC----CCeEEeecCcccc
Q 042348 489 SPKRYVHGDLRPSNILLGKN----MEPHISDFGLARL 521 (686)
Q Consensus 489 ~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~~ 521 (686)
.+..++|||+.+.||+++.+ ..+.|+||+.+..
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 23579999999999999874 6789999998864
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.22 E-value=0.0024 Score=65.35 Aligned_cols=142 Identities=16% Similarity=0.206 Sum_probs=81.0
Q ss_pred cCccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccCCC--CcceeeEE-----EEecCceeEEEeccCC
Q 042348 375 LGKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHP--NIVSLRAY-----FWSVDEKLLIYDYIPN 447 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--nIv~l~~~-----~~~~~~~~lV~e~~~~ 447 (686)
++ |....||++...+|+.+++|....... ....+..|..++..+... .+++++.. ....+..++||||++|
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 55 777899998877777899999864321 235677788888877422 24444443 1224456789999987
Q ss_pred CCHH-----HH---------hhcCC---CccccCCCCHHHH----HH---------------HHHHHHHHHHHHHcc---
Q 042348 448 GSLA-----TA---------IHGKA---GIISYRPLSWSDR----LR---------------IIKGVAKGIAFLHEV--- 488 (686)
Q Consensus 448 gsL~-----~~---------l~~~~---~~~~~~~l~~~~~----~~---------------i~~~ia~gL~~LH~~--- 488 (686)
..+. .+ +|... .......+++... .. +...+...++.+.+.
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5432 10 12110 0000011222111 00 111111223333221
Q ss_pred -CCCCceecCCCCCCeeecCCCCeEEeecCccc
Q 042348 489 -SPKRYVHGDLRPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 489 -~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 520 (686)
.+..++|+|+++.||+++ + .+.|+||+.+.
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 235689999999999998 4 89999998775
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.16 E-value=0.00011 Score=67.18 Aligned_cols=34 Identities=6% Similarity=-0.029 Sum_probs=17.5
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCcEEEccCC
Q 042348 82 AIGRVNLRNNNFSGSLPVELFNASNLQSLILSGN 115 (686)
Q Consensus 82 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 115 (686)
.|+.|||+++.|+..-=..+.++++|+.|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4566666665554322223445555555555555
No 432
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.16 E-value=0.00072 Score=71.31 Aligned_cols=140 Identities=15% Similarity=0.183 Sum_probs=89.8
Q ss_pred EEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccC
Q 042348 59 VFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQ 138 (686)
Q Consensus 59 ~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~ 138 (686)
++.+.+++ .++..-...+..+..|+.+.+..|... .....|.++..|+.+.+..+.+. ...|..+.+|+.+.+..
T Consensus 232 l~~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 232 VKNIIIPD-SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CCEEEECT-TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECT
T ss_pred CceEEECC-CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccccc
Confidence 44444432 233233345666677777777766543 44556667777777766655432 33566778888888865
Q ss_pred CCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccc
Q 042348 139 NSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL 207 (686)
Q Consensus 139 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 207 (686)
+ ++..-...|.++.+|+.++|.++ ++ .|+...+.++.+|+.++|..| ++.+-...|.++.+|+.+
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 371 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKV 371 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEE
T ss_pred c-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEE
Confidence 4 55444567778888888888644 55 566665667888888888766 665656677887777655
No 433
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.06 E-value=0.0011 Score=69.42 Aligned_cols=131 Identities=11% Similarity=0.149 Sum_probs=93.2
Q ss_pred cCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhh
Q 042348 72 FIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQ 151 (686)
Q Consensus 72 ~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 151 (686)
.....+....+|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...|..+.+|+.+.+..+ ++..-...|.+
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~ 284 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSG 284 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTT
T ss_pred Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccc
Confidence 34456677788888888765 33345566778888888888766 44344556777888888888654 55344567788
Q ss_pred ccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccc
Q 042348 152 CKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL 207 (686)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 207 (686)
+.+|+.+.+.+|.++ .|+...+.++.+|+.++|..| ++.+-...|.++.+|+.+
T Consensus 285 c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 285 CSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp CTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred ccccccccccccccc-eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 888888888888777 566666678888888888654 665556678888887755
No 434
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.04 E-value=0.0014 Score=68.71 Aligned_cols=126 Identities=13% Similarity=0.141 Sum_probs=80.1
Q ss_pred cCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccc
Q 042348 77 LGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLK 156 (686)
Q Consensus 77 l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 156 (686)
+.....+..+.+..+.-. .....+....+|+.+.+..+- ...-...|..+.+|+.+.+..+ ++..-...+.++.+|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~~-~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSGV-TTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp CCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTTC-CEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred ccccccccccccccceeE-Eeecccccccccceeeeccce-eEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 344455555555544332 445556667777777776553 3234455667778888877665 5534455677777788
Q ss_pred cccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhcccccccc
Q 042348 157 TVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRLL 207 (686)
Q Consensus 157 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 207 (686)
.+.+..+ ++ .++...+.++.+|+.+++.+|.++.+-...|.++.+|+.+
T Consensus 267 ~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i 315 (379)
T 4h09_A 267 TLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSV 315 (379)
T ss_dssp EEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEE
T ss_pred ccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEE
Confidence 7777544 44 4555555677888888887777776666777777777654
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.03 E-value=0.0016 Score=67.94 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=44.4
Q ss_pred ccCccCceEEEEEEeCC---------CceEEEEEcCCCCccchHHHHHHHHHHhccCCCC-cceeeEEEEecCceeEEEe
Q 042348 374 LLGKSTIGIVYKVALNN---------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIRHPN-IVSLRAYFWSVDEKLLIYD 443 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~~lV~e 443 (686)
.++.|....+|++...+ +..+++|+..... ....+...|.++++.+...+ +.++++.. .-++|||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~e 114 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIEE 114 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec----CCcEEEE
Confidence 36778888999998764 2678888875432 22223467888888884333 44666554 2378999
Q ss_pred ccCCCCH
Q 042348 444 YIPNGSL 450 (686)
Q Consensus 444 ~~~~gsL 450 (686)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 436
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.00 E-value=0.0011 Score=69.90 Aligned_cols=139 Identities=15% Similarity=0.130 Sum_probs=104.7
Q ss_pred CEEEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEecc
Q 042348 58 QVFSLIIPNKKLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLS 137 (686)
Q Consensus 58 ~~~~l~l~~n~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 137 (686)
.++.+.+..+... .-...+..+..++.+.+..+.+. ...|.++.+|+.+.+.++ ++..-..+|.++.+|+.++|.
T Consensus 254 ~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 254 DLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp SCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 5666777766443 55667889999999998877543 356788999999999766 553445678899999999997
Q ss_pred CCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCcccceecccccccCCCCchhhhccccccc
Q 042348 138 QNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLTALQKLDLSFNNLSGLIPNDIANLSRLRL 206 (686)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 206 (686)
.+ ++..-..+|.+|.+|+.+.|..| ++ .|+...+.++.+|+.++|..| ++ .+...|.++++|+.
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 54 76555678999999999999877 66 677777789999999999765 33 23456777776653
No 437
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.97 E-value=0.0029 Score=65.06 Aligned_cols=68 Identities=12% Similarity=0.040 Sum_probs=44.1
Q ss_pred CccCceEEEEEEeCCCceEEEEEcCCCCccchHHHHHHHHHHhccC---CCCcceeeEE------EEecCceeEEEeccC
Q 042348 376 GKSTIGIVYKVALNNEEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR---HPNIVSLRAY------FWSVDEKLLIYDYIP 446 (686)
Q Consensus 376 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~------~~~~~~~~lV~e~~~ 446 (686)
|.|....||++...+| .+++|+...... ..|+.++..+. -|++++.+.. ....+..++||+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4555789999988777 899998755431 34666666552 2224454432 223466789999999
Q ss_pred CCCH
Q 042348 447 NGSL 450 (686)
Q Consensus 447 ~gsL 450 (686)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
No 438
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.94 E-value=0.00034 Score=63.92 Aligned_cols=91 Identities=13% Similarity=0.094 Sum_probs=59.8
Q ss_pred CccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCC-CCCCCChhhhhc----cccccccccccc-cCCCCch
Q 042348 98 PVELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNS-FSSSIPSSIVQC----KRLKTVVLNQNS-FTGPLPD 171 (686)
Q Consensus 98 p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~ 171 (686)
|.....--+|+.|||+++.++..--..+..+++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. +|..=-.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4333233469999999999885544567889999999999985 653222234442 368888888864 5521111
Q ss_pred hhhhcCcccceecccccc
Q 042348 172 GFATNLTALQKLDLSFNN 189 (686)
Q Consensus 172 ~~~~~l~~L~~L~Ls~N~ 189 (686)
.+ ..+++|++|+|++..
T Consensus 134 ~L-~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 AL-HHFRNLKYLFLSDLP 150 (176)
T ss_dssp HG-GGCTTCCEEEEESCT
T ss_pred HH-hcCCCCCEEECCCCC
Confidence 22 367888888888764
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.91 E-value=0.0016 Score=56.58 Aligned_cols=37 Identities=24% Similarity=0.430 Sum_probs=20.6
Q ss_pred CCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCC
Q 042348 106 NLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFS 142 (686)
Q Consensus 106 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 142 (686)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3555555555555433444555666666666666554
No 440
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.85 E-value=0.0031 Score=65.96 Aligned_cols=142 Identities=19% Similarity=0.217 Sum_probs=81.4
Q ss_pred cCccCceEEEEEEeCC--------CceEEEEEcCCCCcc-----------ch-------HHHHHHHHHHhccC-CCCcce
Q 042348 375 LGKSTIGIVYKVALNN--------EEAVAVRRLGNGGWQ-----------RF-------KEFQTEAEAIGKIR-HPNIVS 427 (686)
Q Consensus 375 iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~~-------~~~~~E~~~l~~l~-H~nIv~ 427 (686)
|..|-...+|++...+ ...|.++........ ++ +....|..+++.+. |--..+
T Consensus 60 l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~Pk 139 (401)
T 3f2s_A 60 IRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGPK 139 (401)
T ss_dssp EECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSCC
T ss_pred cCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCCe
Confidence 5567788899988754 256777776443211 11 12235888888884 444567
Q ss_pred eeEEEEecCceeEEEeccCCCCHHH--H---------------hhcCCCccccCCC-CHHHHHHHHHHHH----------
Q 042348 428 LRAYFWSVDEKLLIYDYIPNGSLAT--A---------------IHGKAGIISYRPL-SWSDRLRIIKGVA---------- 479 (686)
Q Consensus 428 l~~~~~~~~~~~lV~e~~~~gsL~~--~---------------l~~~~~~~~~~~l-~~~~~~~i~~~ia---------- 479 (686)
+++++.. .+|+||+++-+|.. + +|.........+. -|..+.++..++.
T Consensus 140 l~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~ 215 (401)
T 3f2s_A 140 LYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRI 215 (401)
T ss_dssp EEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHHH
T ss_pred EEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhhh
Confidence 7777642 28999998754421 1 1211111111111 2334444443321
Q ss_pred ------------HHHHH----HHc-cCCCCceecCCCCCCeeecCC------CCeEEeecCccc
Q 042348 480 ------------KGIAF----LHE-VSPKRYVHGDLRPSNILLGKN------MEPHISDFGLAR 520 (686)
Q Consensus 480 ------------~gL~~----LH~-~~~~~iiHrDlkp~NILl~~~------~~~kl~DfGla~ 520 (686)
.-+.. |.. ..+..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 216 ~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 216 KKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 222 123468999999999999876 789999999875
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.84 E-value=0.0001 Score=68.70 Aligned_cols=87 Identities=16% Similarity=0.190 Sum_probs=48.6
Q ss_pred cCCCCCCCEEEccCC-CCccc----CCccccCCCCCcEEEccCCCCCC----CCcccccCCCCCCEEeccCCCCCCCCC-
Q 042348 77 LGSLSAIGRVNLRNN-NFSGS----LPVELFNASNLQSLILSGNSFSG----PVPMQIGKLKYLQVLDLSQNSFSSSIP- 146 (686)
Q Consensus 77 l~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~~~~p- 146 (686)
+.+-+.|+.|+|++| .|... +-..+..-+.|+.|+|++|+|.. .+...+..=+.|+.|+|++|.++..--
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344566777777774 66421 23344445667777777777762 233344445677777777777763211
Q ss_pred ---hhhhhcccccccccccc
Q 042348 147 ---SSIVQCKRLKTVVLNQN 163 (686)
Q Consensus 147 ---~~~~~l~~L~~L~L~~N 163 (686)
..+..-+.|++|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 12222345666666644
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.78 E-value=0.0021 Score=55.82 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=45.8
Q ss_pred EEEeCCCCcc-ccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccCCCCC
Q 042348 61 SLIIPNKKLT-GFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSGNSFS 118 (686)
Q Consensus 61 ~l~l~~n~l~-g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 118 (686)
.++.++++|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6777888887 35676543 46999999999999666667889999999999999885
No 443
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.54 E-value=0.0051 Score=64.73 Aligned_cols=104 Identities=14% Similarity=0.177 Sum_probs=74.6
Q ss_pred ccccCCCCCcEEEccCCCCCCCCcccccCCCCCCEEeccCCCCCCCCChhhhhccccccccccccccCCCCchhhhhcCc
Q 042348 99 VELFNASNLQSLILSGNSFSGPVPMQIGKLKYLQVLDLSQNSFSSSIPSSIVQCKRLKTVVLNQNSFTGPLPDGFATNLT 178 (686)
Q Consensus 99 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~ 178 (686)
.+|.++.+|+.+.+.++..+ .-...|.++.+|+.+.+. +.++..-...|.+|.+|+.+.|..| ++ .|....+.++.
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~ 334 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCE 334 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCC
Confidence 45667788888888766543 445567788888888885 4555445567888888888888754 55 56666667888
Q ss_pred ccceecccccccCCCCchhhhcccccccc
Q 042348 179 ALQKLDLSFNNLSGLIPNDIANLSRLRLL 207 (686)
Q Consensus 179 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 207 (686)
+|+.+.|..| ++.+-...|.++.+|+.+
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 8888888654 665666778888888765
No 444
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.44 E-value=0.00056 Score=63.78 Aligned_cols=87 Identities=13% Similarity=0.077 Sum_probs=64.5
Q ss_pred cCCCEEEEEeCCC-Ccccc----CCcCcCCCCCCCEEEccCCCCccc----CCccccCCCCCcEEEccCCCCCCC----C
Q 042348 55 REGQVFSLIIPNK-KLTGF----IPADLGSLSAIGRVNLRNNNFSGS----LPVELFNASNLQSLILSGNSFSGP----V 121 (686)
Q Consensus 55 ~~~~~~~l~l~~n-~l~g~----~p~~l~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~ 121 (686)
.+..++.|+|++| +|... +-..+..-+.|+.|+|++|+|... +...+..=+.|++|+|++|.|+.. +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3568999999986 77642 445566778999999999999733 233344457899999999999842 4
Q ss_pred cccccCCCCCCEEeccCCCC
Q 042348 122 PMQIGKLKYLQVLDLSQNSF 141 (686)
Q Consensus 122 p~~~~~l~~L~~L~ls~N~l 141 (686)
-..+..-+.|+.|+|++|..
T Consensus 119 a~aL~~N~tL~~L~L~n~~~ 138 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQ 138 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSS
T ss_pred HHHHhhCCceeEEECCCCcC
Confidence 44566667899999987643
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.27 E-value=0.0076 Score=63.66 Aligned_cols=142 Identities=16% Similarity=0.206 Sum_probs=84.8
Q ss_pred ccCccCceEEEEEEeCC--------CceEEEEEcCCCCccchHHHHHHHHHHhccC-CCCcceeeEEEEecCceeEEEec
Q 042348 374 LLGKSTIGIVYKVALNN--------EEAVAVRRLGNGGWQRFKEFQTEAEAIGKIR-HPNIVSLRAYFWSVDEKLLIYDY 444 (686)
Q Consensus 374 ~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~e~ 444 (686)
.+..|-...+|+....+ +..+++|+..... ....+..+|.++++.+. +.-..++++.+ .-+.||||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ef 151 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIEEF 151 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEEC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEEE
Confidence 36678888999998763 5778888865432 22223467888888884 33345666543 23789999
Q ss_pred cCCCCHHH--------------H---hhcCCC----cc---ccCCCCHHHHHHHHHHH-------------------HHH
Q 042348 445 IPNGSLAT--------------A---IHGKAG----II---SYRPLSWSDRLRIIKGV-------------------AKG 481 (686)
Q Consensus 445 ~~~gsL~~--------------~---l~~~~~----~~---~~~~l~~~~~~~i~~~i-------------------a~g 481 (686)
++|..|.. . +|.... .. ...+.-|.++.++..++ ...
T Consensus 152 I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e 231 (424)
T 3mes_A 152 IDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEE 231 (424)
T ss_dssp CCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHH
T ss_pred eCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHH
Confidence 99865421 0 111000 00 01122345544444332 222
Q ss_pred HHHHHc---------------------cCCCCceecCCCCCCeeecCCCCeEEeecCcccc
Q 042348 482 IAFLHE---------------------VSPKRYVHGDLRPSNILLGKNMEPHISDFGLARL 521 (686)
Q Consensus 482 L~~LH~---------------------~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 521 (686)
+++|.+ ..+..++|+|+.+.||+ +.++.+.++||..|..
T Consensus 232 ~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 232 IDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 333321 11246899999999999 7888999999998863
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.21 E-value=0.039 Score=51.71 Aligned_cols=103 Identities=11% Similarity=0.027 Sum_probs=67.4
Q ss_pred CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCCCCCeeecCCCCeEEeecCcccccccccC
Q 042348 448 GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLRPSNILLGKNMEPHISDFGLARLADIAEE 527 (686)
Q Consensus 448 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 527 (686)
-||.++|...+ .++++.+++.++.|.+.+|.-+-.. +.-..+=+.|..|++..+|.+.+.+ +.+..
T Consensus 33 vSL~eIL~~~~-----~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~~------ 98 (229)
T 2yle_A 33 LSLEEILRLYN-----QPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADDA------ 98 (229)
T ss_dssp EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred ccHHHHHHHcC-----CCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-ccccc------
Confidence 38999998776 6899999999999999998776210 1111223346889999999888775 22110
Q ss_pred CccccccccccCCCCCCCccccccccCCCCCccccCcccccCCCCCCcchHHHHHHHHHHHHhCCCC
Q 042348 528 TPEVHWEQSTTGTPLQSSPYEFTALNSTTSRSYYQAPEASKVRKPTQKWDIYSYGVILLEMISGKLP 594 (686)
Q Consensus 528 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlGvvl~elltG~~P 594 (686)
....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 99 -----------------------------~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 99 -----------------------------GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -----------------------------cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 001267888764 3446788899999999999875444
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.50 E-value=0.21 Score=52.37 Aligned_cols=29 Identities=28% Similarity=0.503 Sum_probs=24.8
Q ss_pred ceecCCCCCCeee------cCCCCeEEeecCcccc
Q 042348 493 YVHGDLRPSNILL------GKNMEPHISDFGLARL 521 (686)
Q Consensus 493 iiHrDlkp~NILl------~~~~~~kl~DfGla~~ 521 (686)
++|+|+.+.|||+ +++..++++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.09 E-value=2.1 Score=39.89 Aligned_cols=84 Identities=15% Similarity=0.191 Sum_probs=61.1
Q ss_pred CCCCcceeeEEEEecCceeEEEeccCC-CCHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHccCCCCceecCCC
Q 042348 421 RHPNIVSLRAYFWSVDEKLLIYDYIPN-GSLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIAFLHEVSPKRYVHGDLR 499 (686)
Q Consensus 421 ~H~nIv~l~~~~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iiHrDlk 499 (686)
.||+.+.. .+-.+.+...+.|+.-+. -++.. + +.++...+++++..|+..-.+++. =+|--+.
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i---------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~ 106 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I---------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLA 106 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G---------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCS
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H---------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEe
Confidence 68888866 455556655555554432 23333 2 347788999999999988866665 4788899
Q ss_pred CCCeeecCCCCeEEeecCccc
Q 042348 500 PSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 500 p~NILl~~~~~~kl~DfGla~ 520 (686)
|+||+++.++.+++.=.|+-.
T Consensus 107 P~NL~f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 107 PDELFFTRDGLPIAKTRGLQN 127 (215)
T ss_dssp GGGEEECTTSCEEESCCEETT
T ss_pred cceEEEcCCCCEEEEEccCcc
Confidence 999999999999999888643
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=81.83 E-value=0.66 Score=29.95 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=17.3
Q ss_pred cccceeeehhHHHHHHHHHHHHhhhhhh
Q 042348 279 HSCAVITTVAVAVLLGICITGFLFYRQY 306 (686)
Q Consensus 279 ~~~~~i~~v~v~~~~~~~~~~~~~~~~~ 306 (686)
.+.+.+.+++++.++++++++.+.++.+
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeeeehHHHHHHHHHHHHHHHHe
Confidence 3456677888887777665555444333
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.65 E-value=3.1 Score=38.95 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=60.0
Q ss_pred CCCCcceeeEEEEecCceeEEEeccCCC-CHHHHhhcCCCccccCCCCHHHHHHHHHHHHHHHH-HHHccCCCCceecCC
Q 042348 421 RHPNIVSLRAYFWSVDEKLLIYDYIPNG-SLATAIHGKAGIISYRPLSWSDRLRIIKGVAKGIA-FLHEVSPKRYVHGDL 498 (686)
Q Consensus 421 ~H~nIv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~-~LH~~~~~~iiHrDl 498 (686)
.||++ -..+-.+.+...+.++.-+++ ++. .+ +.++...+++++..|+.... +++. -+|--+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i---------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l 110 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AI---------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIV 110 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HH---------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCC
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HH---------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEE
Confidence 68888 333445666666667665333 333 33 24678889999999988766 5555 578889
Q ss_pred CCCCeeecCCCCeEEeecCccc
Q 042348 499 RPSNILLGKNMEPHISDFGLAR 520 (686)
Q Consensus 499 kp~NILl~~~~~~kl~DfGla~ 520 (686)
.|+||+++.++.+++.-.|+-.
T Consensus 111 ~P~NL~f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 111 CPENLMFNRALEPFFLHVGVKE 132 (219)
T ss_dssp CGGGEEECTTCCEEESCCEETT
T ss_pred eCceEEEeCCCcEEEEEcCCcc
Confidence 9999999999999999888753
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=77.84 E-value=0.26 Score=52.59 Aligned_cols=55 Identities=11% Similarity=0.107 Sum_probs=14.8
Q ss_pred ceEEEEEEeCC-CceEEE------EEcCCCC--ccchHHHHHHHHHHhccCCCCcceeeEEEEe
Q 042348 380 IGIVYKVALNN-EEAVAV------RRLGNGG--WQRFKEFQTEAEAIGKIRHPNIVSLRAYFWS 434 (686)
Q Consensus 380 ~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 434 (686)
||.||+|.+.. ..+||| |..+... ......|.+|..+++..+|||+++.+++...
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 99999999864 367888 7665432 2234568889999999999999999887653
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=40.61 E-value=17 Score=24.08 Aligned_cols=7 Identities=29% Similarity=0.430 Sum_probs=2.9
Q ss_pred eeehhHH
Q 042348 284 ITTVAVA 290 (686)
Q Consensus 284 i~~v~v~ 290 (686)
+++.+++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3344444
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.01 E-value=1.1e+02 Score=24.29 Aligned_cols=46 Identities=17% Similarity=0.240 Sum_probs=23.2
Q ss_pred CccccCCcCcCCCCCCCEEEccCCCCcccCCccccCCCCCcEEEccC
Q 042348 68 KLTGFIPADLGSLSAIGRVNLRNNNFSGSLPVELFNASNLQSLILSG 114 (686)
Q Consensus 68 ~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 114 (686)
.++..-...|.++++|+.+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344333445556666666666554 2223344555555555555544
Done!