Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>042352
MPLSLSSSSLLFPSFTINSKPHRFTFNIQASSSSSSKQLSLNSKLERKDRVIVIGAGLAG
LAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQIFITAYPEAQKLLDYNAL
NLQKFYSGAKVYYNGQFHTVADPFRHFWDSIKSLANPIGSVLDKLLIGLTRIRVLIKTDE
QILTSSEVPIIELLRNIGFSDSIIDSFFRPFFGGIFFDKELETSSRLFDFIFKCLALGDN
TIPANGICQIPNQIASKLPFESILLNTRVLSIDFDEQNMPNVRLANGETLKSEIGVILAV
EEPEADKLLRQPVKFQRKPARSTVCLYFSADKDEIPVQEPVLFLNGSGKGIVNNMFFATN
VAPLYGPLDKALISVSLIGLFADVMDDNLTAEVIRELSDWFGKSTVGSWRHLRTYRVRFA
QPNQSPPTDLIKNPKSEFSLAVYLC

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042352
        (445 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2075029 - symbol:AT3G09580 species:3702 "Arabi...  1286  3.9e-131  1


>TAIR|locus:2075029 [details] [associations]
            symbol:AT3G09580 species:3702 "Arabidopsis thaliana"
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0010103 "stomatal complex morphogenesis"
            evidence=RCA] [GO:0016556 "mRNA modification" evidence=RCA]
            InterPro:IPR002937 Pfam:PF01593 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0016491 GO:GO:0009941 EMBL:AC016661
            eggNOG:COG1233 EMBL:AY064000 EMBL:AY117185 IPI:IPI00523167
            RefSeq:NP_187569.1 UniGene:At.27109 UniGene:At.70028
            ProteinModelPortal:Q9SF45 SMR:Q9SF45 STRING:Q9SF45 PaxDb:Q9SF45
            PRIDE:Q9SF45 DNASU:820115 EnsemblPlants:AT3G09580.1 GeneID:820115
            KEGG:ath:AT3G09580 TAIR:At3g09580 HOGENOM:HOG000250521
            InParanoid:Q9SF45 OMA:FHTVADP PhylomeDB:Q9SF45
            ProtClustDB:CLSN2685148 ArrayExpress:Q9SF45 Genevestigator:Q9SF45
            Uniprot:Q9SF45
        Length = 477

 Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
 Identities = 253/398 (63%), Positives = 317/398 (79%)

Query:    47 RKDR--VIVIXXXXXXXXXXTRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQIF 104
             RK++  VI+I           +L S+  PF+LLEASD VGGRVRTD VDGF LDRGFQIF
Sbjct:    43 RKNQTGVIIIGAGLAGLAAANQLTSKRIPFLLLEASDGVGGRVRTDIVDGFFLDRGFQIF 102

Query:   105 ITAYPEAQKLLDYNALNLQKFYSGAKVYYNGQFHTVADPFRHFWDSIKSLANPIGSVLDK 164
             ITAYPEA+KLLDY AL+LQ+FY+GAKV+Y G+FHTVADP RHFWDS+ SLANPIGSV+DK
Sbjct:   103 ITAYPEAKKLLDYEALDLQRFYAGAKVFYGGKFHTVADPLRHFWDSVASLANPIGSVVDK 162

Query:   165 LLIGLTRIRVLIKTDEQILTSS-EVPIIELLRNIGFSDSIIDSXXXXXXXXXXXDKELET 223
              LI LTR RVLIK+DE+ILT++ EVP I+LLR IGFS++I+D            D++LET
Sbjct:   163 GLIALTRARVLIKSDEEILTAADEVPTIDLLRKIGFSETILDRFFRPFFGGIFFDRDLET 222

Query:   224 SSRLFDFIFKCLALGDNTIPANGICQIPNQIASKLPFESILLNTRVLSIDFDE---QNMP 280
             +S+LFDF+F+CLALG+NT+PA GI +I NQ+A+KLP +S+LLNTRV SI++      + P
Sbjct:   223 TSKLFDFVFRCLALGENTLPAMGIGEISNQLAAKLPAKSVLLNTRVASIEYPNGSGSDPP 282

Query:   281 NVRLANGETLKSEIGVILAVEEPEADKLL---RQPVKFQRKPARSTVCLYFSADKDEIPV 337
             +VRL +G  +K+E+GVI+AVE+PE +KLL   R PV    KPARST+CLYF+A+ ++IPV
Sbjct:   283 SVRLQDGSVMKAELGVIIAVEQPEVNKLLDGIRDPVI--TKPARSTICLYFTAEPNQIPV 340

Query:   338 QEPVLFLNGSGKGIVNNMFFATNVAPLYGPLDKALISVSLIGLFADVMDDNLTAEVIREL 397
             Q+PVLFLNGS  GI+NNMFFATNVA  Y P  KAL+SVSLIGLF D  DD+L AEV+REL
Sbjct:   341 QDPVLFLNGSNSGIINNMFFATNVARTYAPPGKALVSVSLIGLFEDRTDDDLAAEVLREL 400

Query:   398 SDWFGKSTVGSWRHLRTYRVRFAQPNQSPPTDLIKNPK 435
             S WFG+S V SW+HL+TYR++FAQPNQ PPTDL+K+P+
Sbjct:   401 SGWFGESPVMSWKHLKTYRIQFAQPNQCPPTDLVKSPR 438


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.139   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      445       395   0.00096  117 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  229 KB (2126 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.67u 0.15s 28.82t   Elapsed:  00:00:02
  Total cpu time:  28.67u 0.15s 28.82t   Elapsed:  00:00:02
  Start:  Fri May 10 04:17:06 2013   End:  Fri May 10 04:17:08 2013

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