BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042352
(445 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P40974|PUO_KOCRO Putrescine oxidase OS=Kocuria rosea GN=puo PE=1 SV=1
Length = 478
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 36 SKQLSLNSKLERKDRVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGF 95
+ Q +L S+ + V+V+GAG AGL AA L + GR +LEA D VGGR + +VDG
Sbjct: 2 TDQRTLGSETAIERDVVVVGAGPAGLMAARTLVAAGRTVAVLEARDRVGGRTWSKTVDGA 61
Query: 96 LLDRGFQIFITAYPEAQKLLDYNAL-NLQKFYSGAKVYY--NGQFHT 139
L+ G Q E L+D L Q++ G VY +G HT
Sbjct: 62 FLEIGGQWISPDQTELLALVDELGLETYQRYREGESVYLAPDGTRHT 108
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 46 ERKDRVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIF 104
E+ V+V+GAGLAGL+ A L G +LLE+ D +GG++ DG + G IF
Sbjct: 95 EKGLEVVVVGAGLAGLSTAKYLADAGHKPILLESRDVLGGKIAAWKDKDGDWYETGLHIF 154
Query: 105 ITAYPEAQKLLDYNALNLQKFYSGAKVYYN-----GQF------HTVADPFRHFWDSIKS 153
AYP Q L +N + + + + G+F + P W +++
Sbjct: 155 FGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILRN 214
Query: 154 LANPIGSVLDKLLIGLTRIRVLIKTDEQILTSSEVPIIELLRNIGFSDSIIDSFF 208
N + + +K+ + + ++ + + + E +R G D + D F
Sbjct: 215 --NEMLTWPEKVRFAIGLLPAMVGGQAYVEAQDGLTVTEWMRRQGVPDRVNDEVF 267
>sp|P81383|OXLA_OPHHA L-amino-acid oxidase OS=Ophiophagus hannah PE=1 SV=3
Length = 491
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
+++++GAG++GL AA G V+LEASD VGGR++T DG+ +D G
Sbjct: 53 KIVIVGAGISGLTAAKLFREAGHEVVILEASDRVGGRIKTHREDGWYVDVG 103
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 14/171 (8%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIFITAY 108
+V++ GAGLAGL+ A L G +LLEA D +GG++ DG + G IF AY
Sbjct: 106 QVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAY 165
Query: 109 PEAQKLLDYNALNLQKFYSGAKVYYN-----GQF------HTVADPFRHFWDSIKSLANP 157
P Q L +N + + + + G+F T+ P W +++ N
Sbjct: 166 PNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRN--NE 223
Query: 158 IGSVLDKLLIGLTRIRVLIKTDEQILTSSEVPIIELLRNIGFSDSIIDSFF 208
+ + +K+ L + ++ + + E ++ G D + D F
Sbjct: 224 MLTWPEKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVF 274
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 14/171 (8%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIFITAY 108
+V++ GAGLAGL+ A L G +LLEA D +GG++ DG + G IF AY
Sbjct: 106 QVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAY 165
Query: 109 PEAQKLLDYNALNLQKFYSGAKVYYN-----GQF------HTVADPFRHFWDSIKSLANP 157
P Q L +N + + + + G+F T+ P W +++ N
Sbjct: 166 PNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRN--NE 223
Query: 158 IGSVLDKLLIGLTRIRVLIKTDEQILTSSEVPIIELLRNIGFSDSIIDSFF 208
+ + +K+ L + ++ + + E ++ G D + D F
Sbjct: 224 MLTWPEKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVF 274
>sp|O32434|PPOX_PROFF Protoporphyrinogen oxidase OS=Propionibacterium freudenreichii
subsp. freudenreichii GN=hemY PE=3 SV=1
Length = 527
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 51 VIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQIFITAYPE 110
++V+G G+ GLAAA + ++G ++E+ D GG+V TD DGFL+++G F+ P
Sbjct: 29 LVVVGGGITGLAAAWQGMARGARVSVVESDDHFGGKVVTDRRDGFLVEQGPDSFVAYRPA 88
Query: 111 AQKLLDYNALNLQKFYSGA----KVYYNGQFHTVAD------PFRHFWDSIKSLANPIGS 160
A KL++ L+ Q G + G+ + P R W + + + S
Sbjct: 89 ALKLIEELGLSDQVIAPGGGRRVSLLSRGKLRPMPAGMGMVLPTR-MWPFVTTT---VLS 144
Query: 161 VLDKLLIGLTRIRVLIKTDEQILTSSEVPIIELLRNIGFSDSIIDSFFRPFFGGIF 216
DK+ GL + + L +V I LR D I+ F P GGI+
Sbjct: 145 WPDKIRAGLDLVI------PRRLPDHDVAIGAFLRQR-LGDGIVRRFADPMVGGIY 193
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIFITAY 108
+V+V GAGLAGL+ A L G +LLEA D +GG+V DG + G IF AY
Sbjct: 98 QVVVAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAY 157
Query: 109 PEAQKLL 115
P Q L
Sbjct: 158 PNIQNLF 164
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIFITAY 108
+V++ GAGLAGL+ A L G +LLEA D +GG++ DG + G IF AY
Sbjct: 94 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAY 153
Query: 109 PEAQKLLDYNALN 121
P Q L +N
Sbjct: 154 PNVQNLFGELGIN 166
>sp|Q94IG7|PPOCM_SPIOL Protoporphyrinogen oxidase, chloroplastic/mitochondrial OS=Spinacia
oleracea GN=POX2 PE=1 SV=1
Length = 531
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQIFITAYP 109
RV V+GAG++GLAAA +L S G L EA GG+++T DG + D G +
Sbjct: 44 RVAVVGAGVSGLAAAYKLKSNGLNVTLFEADSRAGGKLKTVVKDGLIWDEGANTMTESDE 103
Query: 110 EAQKLLD 116
E L D
Sbjct: 104 EVTSLFD 110
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 51 VIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIFITAYP 109
+++ GAGLAGL+ A L G +LLEA D +GG+V DG + G IF AYP
Sbjct: 101 IVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYP 160
Query: 110 EAQKLLDYNALN 121
Q L +N
Sbjct: 161 YVQNLFGELGIN 172
>sp|Q8NUQ6|CRTN_STAAW Dehydrosqualene desaturase OS=Staphylococcus aureus (strain MW2)
GN=crtN PE=3 SV=1
Length = 502
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E ++ VGGR+ DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMG 52
>sp|Q6G6B3|CRTN_STAAS Dehydrosqualene desaturase OS=Staphylococcus aureus (strain
MSSA476) GN=crtN PE=3 SV=1
Length = 502
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E ++ VGGR+ DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMG 52
>sp|Q4JHE1|OXLA_PSEAU L-amino-acid oxidase OS=Pseudechis australis PE=1 SV=1
Length = 517
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT--DSVDGFLLDRG 100
RV+V+GAG+AGL+AA L G LLEAS+ VGGRV T + DG+ ++ G
Sbjct: 54 RVVVVGAGMAGLSAAYVLAGAGHQVTLLEASERVGGRVNTYRNEKDGWYVNLG 106
>sp|Q7A3E2|CRTN_STAAN Dehydrosqualene desaturase OS=Staphylococcus aureus (strain N315)
GN=crtN PE=1 SV=1
Length = 502
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E ++ VGGR+ DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMG 52
>sp|Q99R76|CRTN_STAAM Dehydrosqualene desaturase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=crtN PE=3 SV=1
Length = 502
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E ++ VGGR+ DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMG 52
>sp|O07855|CRTN_STAAE Dehydrosqualene desaturase OS=Staphylococcus aureus (strain Newman)
GN=crtN PE=1 SV=2
Length = 502
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E ++ VGGR+ DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMG 52
>sp|Q2FV60|CRTN_STAA8 Dehydrosqualene desaturase OS=Staphylococcus aureus (strain NCTC
8325) GN=crtN PE=3 SV=1
Length = 502
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E ++ VGGR+ DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMG 52
>sp|Q2FDU6|CRTN_STAA3 Dehydrosqualene desaturase OS=Staphylococcus aureus (strain USA300)
GN=crtN PE=3 SV=1
Length = 502
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E ++ VGGR+ DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMG 52
>sp|Q6GDN7|CRTN_STAAR Dehydrosqualene desaturase OS=Staphylococcus aureus (strain
MRSA252) GN=crtN PE=3 SV=1
Length = 502
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E ++ VGGR+ DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMG 52
>sp|A8QL52|OXLA_BUNFA L-amino-acid oxidase OS=Bungarus fasciatus PE=1 SV=1
Length = 517
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT--DSVDGFLLDRG 100
V+V+GAG+AGL+AA L G LLEASD VGGRV T D +G+ ++ G
Sbjct: 54 HVVVVGAGMAGLSAAYVLAGAGHRVTLLEASDRVGGRVNTYRDEKEGWYVNMG 106
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIFITAY 108
+++ GAGL GL+ A L G +LLEA D +GG+V DG + G IF AY
Sbjct: 112 EIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAY 171
Query: 109 PEAQKLLDYNALN 121
P Q L +N
Sbjct: 172 PNMQNLFGELGIN 184
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIFITAY 108
+++ GAGL GL+ A L G +LLEA D +GG+V DG + G IF AY
Sbjct: 113 EIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAY 172
Query: 109 PEAQKLLDYNALN 121
P Q L +N
Sbjct: 173 PNIQNLFGELGIN 185
>sp|A8QL51|OXLA_BUNMU L-amino-acid oxidase OS=Bungarus multicinctus PE=2 SV=1
Length = 517
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT--DSVDGFLLDRG 100
V+V+GAG+AGL+AA L G LLEASD VGGR T D +G+ ++ G
Sbjct: 54 HVVVVGAGMAGLSAAYVLEKAGHRVTLLEASDRVGGRANTYRDEKEGWYVNMG 106
>sp|Q2YWE8|CRTN_STAAB Dehydrosqualene desaturase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=crtN PE=3 SV=1
Length = 502
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E + VGGR+ DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNTNVGGRMNQLKKDGFTFDMG 52
>sp|Q9VW97|LSDA_DROME Possible lysine-specific histone demethylase 1 OS=Drosophila
melanogaster GN=Su(var)3-3 PE=1 SV=1
Length = 890
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQIFITAYP 109
+VIVIGAG++GLA A +L G ++LEA D VGGR+ T + ++ D G + Y
Sbjct: 266 KVIVIGAGISGLAVAHQLQQFGMDVIVLEARDRVGGRISTFRKNSYIADVGAMVVTGVYG 325
Query: 110 EAQKLL 115
+L
Sbjct: 326 NPMTIL 331
>sp|O93364|OXLA_CROAD L-amino-acid oxidase OS=Crotalus adamanteus PE=1 SV=1
Length = 516
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT 89
RV+++GAG+AGL+AA L G +LEAS+ VGGRVRT
Sbjct: 53 RVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGGRVRT 92
>sp|P56742|OXLA_CROAT L-amino-acid oxidase OS=Crotalus atrox PE=1 SV=2
Length = 516
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT 89
RV+++GAG+AGL+AA L G +LEAS+ VGGRVRT
Sbjct: 53 RVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGGRVRT 92
>sp|F8S0Z5|OXLA2_CROAD L-amino-acid oxidase OS=Crotalus adamanteus PE=2 SV=1
Length = 516
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT 89
RV+++GAG+AGL+AA L G +LEAS+ VGGRVRT
Sbjct: 53 RVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGGRVRT 92
>sp|O24164|PPOM_TOBAC Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum
GN=PPXII PE=1 SV=1
Length = 504
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQIFITAYP 109
RV VIGAG++GLAAA +L G + EA GG++R+ S DG + D G +
Sbjct: 15 RVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEG 74
Query: 110 EAQKLLD 116
+ L+D
Sbjct: 75 DVTFLID 81
>sp|Q96RQ9|OXLA_HUMAN L-amino-acid oxidase OS=Homo sapiens GN=IL4I1 PE=1 SV=1
Length = 567
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 41 LNSKLERKDRVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT--DSVDGFLLD 98
LN L + RVIV+GAG+AGL AA L G +LEA + +GGR+ T D G++ +
Sbjct: 53 LNRTL-KPQRVIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFTYRDQNTGWIGE 111
Query: 99 RGFQIFITAYPEAQKLLDYNALNLQKF 125
G +++ KL LNL KF
Sbjct: 112 LGAMRMPSSHRILHKLCQGLGLNLTKF 138
>sp|A6MFL0|OXLA_DEMVE L-amino-acid oxidase OS=Demansia vestigiata PE=2 SV=1
Length = 517
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT--DSVDGFLLDRG 100
RV+V+GAG+AGL+AA L G +LLEAS+ VGGRV T + +G+ ++ G
Sbjct: 54 RVVVVGAGMAGLSAAYVLAGAGHNVMLLEASERVGGRVNTYRNEQEGWYVNLG 106
>sp|P56601|PPOX_MYXXA Protoporphyrinogen oxidase OS=Myxococcus xanthus GN=hemY PE=1 SV=1
Length = 471
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 51 VIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQIFITAYPE 110
V V+G G++GLA A L S+G VLLE+S +GG V T ++ G+L+++G F+ P
Sbjct: 12 VAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPA 71
Query: 111 AQKLLDYNALNLQKFYSGAK-------VYYNGQFHTV 140
+ L ALNL+ A VY G+ +V
Sbjct: 72 TRAL--AAALNLEGRIRAADPAAKRRYVYTRGRLRSV 106
>sp|Q6ZQ88|KDM1A_MOUSE Lysine-specific histone demethylase 1A OS=Mus musculus GN=Kdm1a
PE=1 SV=2
Length = 853
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 45 LERKDRVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQI 103
+++ +VI+IG+G++GLAAA +L S G LLEA D VGGRV T ++ D G +
Sbjct: 276 IKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMV 334
>sp|B0VXW0|OXLA_SISCA L-amino-acid oxidase OS=Sistrurus catenatus edwardsii PE=2 SV=1
Length = 516
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQIFITAYP 109
RV+++GAG++GL+AA L G +LEAS+ VGGRVRT + + + G T +
Sbjct: 53 RVVIVGAGMSGLSAAYVLAGAGHQVTVLEASERVGGRVRTYRKEDWYANLGPMRLPTKHR 112
Query: 110 EAQKLLDYNALNLQKFY 126
++ + L L +F+
Sbjct: 113 IVREYIKKFGLELNEFF 129
>sp|Q9LYT1|PAO3_ARATH Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1
Length = 488
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 44 KLERKDRVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
K +R VIVIG G+AG++AA L V+LE+ D +GGRV TD GF +D G
Sbjct: 24 KKKRSPSVIVIGGGMAGISAARTLQDASFQVVVLESRDRIGGRVHTDYSFGFPVDLG 80
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIFITAY 108
RV++ GAGLAGLA A L G V+LE D +GG++ DG + G IF AY
Sbjct: 2 RVVIAGAGLAGLACAKYLADAGFTPVVLERRDVLGGKIAAWKDEDGDWYETGLHIFFGAY 61
Query: 109 PEAQKL 114
P +L
Sbjct: 62 PNMLQL 67
>sp|P50264|FMS1_YEAST Polyamine oxidase FMS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FMS1 PE=1 SV=1
Length = 508
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 41 LNSKLERKDRVIVIGAGLAGLAAATRLHSQG-RPFVLLEASDAVGGRVRT 89
+N+ K +VI+IGAG+AGL AA+ LH G + ++LEA D VGGR++T
Sbjct: 1 MNTVSPAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50
>sp|O60341|KDM1A_HUMAN Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A
PE=1 SV=2
Length = 852
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 46 ERKDRVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQI 103
++ +VI+IG+G++GLAAA +L S G LLEA D VGGRV T ++ D G +
Sbjct: 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMV 333
>sp|Q4JHE3|OXLA_OXYSC L-amino-acid oxidase OS=Oxyuranus scutellatus scutellatus PE=2 SV=1
Length = 517
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT--DSVDGFLLDRG 100
V+V+GAG+AGL+AA L G LLEAS+ VGGRV T + +G+ ++ G
Sbjct: 54 HVVVVGAGMAGLSAAYVLAGAGHKVTLLEASERVGGRVHTYRNEKEGWYVNLG 106
>sp|Q4JHE2|OXLA_NOTSC L-amino-acid oxidase OS=Notechis scutatus scutatus PE=2 SV=1
Length = 517
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT--DSVDGFLLDRG 100
V+V+GAG+AGL+AA L G LLEAS+ VGGRV T + +G+ ++ G
Sbjct: 54 HVVVVGAGMAGLSAAYVLAGAGHNVTLLEASERVGGRVNTYRNETEGWYVNLG 106
>sp|Q5HCY9|CRTN_STAAC Dehydrosqualene desaturase OS=Staphylococcus aureus (strain COL)
GN=crtN PE=3 SV=1
Length = 502
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
++ VIGAG+ GLAAA R+ SQG + E ++ VGG + DGF D G
Sbjct: 2 KIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGCMNQLKKDGFTFDMG 52
>sp|P18487|A37C_DROME Protein anon-37Cs OS=Drosophila melanogaster GN=anon-37Cs PE=2
SV=3
Length = 504
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 14 SFTINSKPHRFTFNIQASSSSSSKQLSLNSKLERKD-RVIVIGAGLAGLAAATRLHSQG- 71
F + S+ + + + + KQ S + + R++ +++V+GAGLAGL+AA L S G
Sbjct: 3 CFKLASRRSLYNARVLQADNIGDKQRSPDLEAARQNTQIVVVGAGLAGLSAAQHLLSHGF 62
Query: 72 RPFVLLEASDAVGGRVRT 89
R V+LEA+D GGR+ T
Sbjct: 63 RRTVILEATDRYGGRINT 80
>sp|A8QL58|OXLA_NAJAT L-amino-acid oxidase (Fragment) OS=Naja atra PE=1 SV=1
Length = 449
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT--DSVDGFLLDRG 100
V+V+GAG+AGL+AA L G LLEAS+ VGGRV T + +G+ ++ G
Sbjct: 54 HVVVVGAGMAGLSAAYVLAGAGHKVTLLEASERVGGRVITYHNDREGWYVNMG 106
>sp|P0DI84|OXLA_VIPAA L-amino-acid oxidase OS=Vipera ammodytes ammodytes PE=1 SV=1
Length = 484
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT--DSVDGFLLDRG 100
V+V+GAG++GL+AA L G +LEAS+ GGRVRT +S +G+ + G
Sbjct: 33 HVVVVGAGMSGLSAAYVLAGAGHKVTVLEASERAGGRVRTHRNSKEGWYANLG 85
>sp|P22871|CRTI_ESCVU Phytoene desaturase (lycopene-forming) OS=Escherichia vulneris
GN=crtI PE=3 SV=1
Length = 492
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 28/51 (54%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRG 100
+ +VIGAG GLA A RL + G P VLLE D GGR GF D G
Sbjct: 3 KTVVIGAGFGGLALAIRLQAAGIPTVLLEQRDKPGGRAYVWHDQGFTFDAG 53
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT-DSVDGFLLDRGFQIFITAY 108
RV + GAGLAGL+ A L G ++ E D +GG+V DG + G IF AY
Sbjct: 2 RVAIAGAGLAGLSCAKYLADAGHTPIVYERRDVLGGKVAAWKDEDGDWYETGLHIFFGAY 61
Query: 109 PEAQKLLDYNALNLQ 123
P +L + LN++
Sbjct: 62 PNMLQL--FKELNIE 74
>sp|Q8BW75|AOFB_MOUSE Amine oxidase [flavin-containing] B OS=Mus musculus GN=Maob PE=1
SV=4
Length = 520
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 45 LERKDRVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT 89
+ K VIV+G G++G+AAA LH G V+LEA D VGGR T
Sbjct: 1 MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYT 45
>sp|Q556K3|AOFB_DICDI Probable flavin-containing monoamine oxidase B OS=Dictyostelium
discoideum GN=maoB-1 PE=3 SV=1
Length = 471
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 35/180 (19%)
Query: 51 VIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSV---DGFLLDRGFQIFITA 107
I+IG GL+GL A L ++LEA + GG RTDSV DG+ +D G Q T
Sbjct: 11 TIIIGGGLSGLNTAYDLKKSNFKILVLEARNRFGG--RTDSVKVGDGW-VDAGGQWLGTN 67
Query: 108 YPEAQKLLDYNALNLQKFYSGAKVYYNGQFHTVADPFRHFWDSIKSLANPIGSVLDKLLI 167
P ++L L L+ + K +Y G+ TV D + D + + D I
Sbjct: 68 NPNLKQLC--KELKLETY----KQFYQGK--TVFDIYD---DGLIKSFDESSPNFDLCEI 116
Query: 168 GLTRIRVLIKTDEQIL-------TSSEVPII---------ELLRNIGFSDSIIDSFFRPF 211
GL I +I+ ++++ S E PI+ E LR G+ +S+ FF F
Sbjct: 117 GLGNINPIIRAIKEVMKNIDFSKCSKESPIMLSLEKLTVSEWLRVCGYGESV--KFFNWF 174
>sp|Q6TGQ8|OXLA_BOTMO L-amino-acid oxidase (Fragment) OS=Bothrops moojeni PE=1 SV=1
Length = 478
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 50 RVIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRT 89
RV+++GAG++GL+AA L + G +LEAS+ GGRV+T
Sbjct: 41 RVVIVGAGMSGLSAAYVLANAGHQVTVLEASERAGGRVKT 80
>sp|Q54IT3|AOFA_DICDI Probable flavin-containing monoamine oxidase A OS=Dictyostelium
discoideum GN=maoA PE=3 SV=1
Length = 456
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 115/286 (40%), Gaps = 40/286 (13%)
Query: 51 VIVIGAGLAGLAAATRLHSQGRPFVLLEASDAVGGRVRTDSVDGFLLDRGFQIFITAYPE 110
V+++G GL GL AA + G ++L+ D GGR + V+ + D G Q +
Sbjct: 7 VVIVGGGLTGLNAAYQFKKAGLNVMVLKPKDRFGGRTESIKVEDYWFDLGGQWMGGTHKY 66
Query: 111 AQKLLDYNALNLQKF-----------YSGAKVYYNGQFHTVADPFRHFWDSIKSLANPIG 159
++L D L ++ F +G KVYY G + + +++ L I
Sbjct: 67 LKELCD--ELGVKSFPQYDEGKHVLEINGKKVYYQGNISNLNKSY-----NLEGLFESI- 118
Query: 160 SVLDKLLIGLTRIRVLI----KTDEQILTSSEVPIIELLRNIGFSD--SIIDSFFRPFFG 213
S +D+L L + K +Q+ + V +N+ +D SIID F R
Sbjct: 119 SKIDELSAELNPDKPYAHSKSKEYDQLTVAQWVE-----KNVKGNDARSIIDWFCRVCVA 173
Query: 214 G-------IFFDKELETSSRLFDFIFKCLALGDNTIPANGICQIPNQIASKLPFESILLN 266
+FF + T+ + + G QI +A K+ + LN
Sbjct: 174 AEPTEVSFLFFLHFIRTAGN-YGLLADIHGGAQQDRLIGGSQQISEGLAKKIGEKHYTLN 232
Query: 267 TRVLSIDFDEQNMPNVRLANGETLKSEIGVILAVEEPEADKLLRQP 312
V SI + N ++ NG T +S+ +++A+ A ++ P
Sbjct: 233 APVRSI-IQDANQCTIKTDNGSTYRSKY-IVVAIPPTLAGRIHYSP 276
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,410,472
Number of Sequences: 539616
Number of extensions: 6681857
Number of successful extensions: 19139
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 18821
Number of HSP's gapped (non-prelim): 359
length of query: 445
length of database: 191,569,459
effective HSP length: 121
effective length of query: 324
effective length of database: 126,275,923
effective search space: 40913399052
effective search space used: 40913399052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)