Query 042356
Match_columns 492
No_of_seqs 238 out of 1451
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 05:26:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042356.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042356hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0753 KatE Catalase [Inorgan 100.0 6E-160 1E-164 1219.1 40.1 476 15-491 14-493 (496)
2 KOG0047 Catalase [Inorganic io 100.0 7E-160 2E-164 1194.7 32.4 478 12-491 19-500 (505)
3 PLN02609 catalase 100.0 2E-151 4E-156 1188.8 46.8 490 1-492 1-492 (492)
4 cd08154 catalase_clade_1 Clade 100.0 2E-147 3E-152 1157.0 44.7 469 16-486 1-469 (469)
5 PRK11249 katE hydroperoxidase 100.0 7E-143 2E-147 1172.9 45.0 473 14-488 74-561 (752)
6 cd08156 catalase_clade_3 Clade 100.0 2E-136 5E-141 1067.0 41.7 427 58-486 1-429 (429)
7 cd08155 catalase_clade_2 Clade 100.0 3E-134 6E-139 1051.9 41.6 430 55-486 1-443 (443)
8 cd08157 catalase_fungal Fungal 100.0 1E-133 3E-138 1057.9 43.5 444 42-487 1-451 (451)
9 cd00328 catalase Catalase heme 100.0 2E-130 3E-135 1025.4 40.3 427 58-486 1-433 (433)
10 PF00199 Catalase: Catalase; 100.0 3E-112 6E-117 887.5 30.0 382 18-400 1-383 (384)
11 cd08153 srpA_like Catalase-lik 100.0 1.3E-74 2.8E-79 585.0 30.3 292 50-356 3-295 (295)
12 cd08150 catalase_like Catalase 100.0 1.3E-69 2.8E-74 545.6 28.4 279 60-356 1-283 (283)
13 cd08151 AOS Allene oxide synth 100.0 3.6E-69 7.7E-74 552.1 28.9 290 47-356 10-328 (328)
14 cd08152 y4iL_like Catalase-lik 100.0 2E-66 4.4E-71 527.4 26.3 280 59-357 2-305 (305)
15 PF06628 Catalase-rel: Catalas 99.8 3.4E-20 7.4E-25 147.7 5.3 66 420-487 2-68 (68)
16 TIGR03784 marine_sortase sorta 37.4 26 0.00057 33.0 2.5 45 289-335 39-87 (174)
17 PF14098 SSPI: Small, acid-sol 34.6 33 0.00071 27.2 2.2 22 433-454 44-65 (65)
18 TIGR03092 SASP_sspI small, aci 34.6 34 0.00074 27.0 2.3 23 433-455 43-65 (65)
19 PHA03155 hypothetical protein; 29.5 46 0.00099 29.2 2.5 40 436-476 40-79 (115)
20 PF10410 DnaB_bind: DnaB-helic 28.5 1.5E+02 0.0032 21.9 5.0 42 437-490 15-56 (59)
21 PF13945 NST1: Salt tolerance 25.7 37 0.00081 32.6 1.4 17 432-448 108-124 (190)
22 cd06409 PB1_MUG70 The MUG70 pr 25.3 46 0.001 27.8 1.7 33 209-243 2-34 (86)
23 PRK02955 small acid-soluble sp 24.7 65 0.0014 25.7 2.3 23 433-455 46-68 (68)
24 PF13511 DUF4124: Domain of un 23.9 54 0.0012 24.7 1.8 20 207-229 13-32 (60)
No 1
>COG0753 KatE Catalase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-160 Score=1219.06 Aligned_cols=476 Identities=50% Similarity=0.854 Sum_probs=458.7
Q ss_pred CcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCC
Q 042356 15 PFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPG 94 (492)
Q Consensus 15 ~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~G 94 (492)
.+|||++|+||.++++|+|+|.+||+||||++|+|||+||||||||||+|||||.||+|+|+++++++++|+|++|+++|
T Consensus 14 ~~lT~~~G~pv~dnqnsltaG~rGP~llqD~~l~Ekl~hFdrErIPERvvHAkG~GA~G~F~~t~dis~yT~A~~f~e~G 93 (496)
T COG0753 14 TTLTTNQGAPVADNQNSLTAGPRGPTLLQDFHLLEKLAHFDRERIPERVVHAKGSGAHGYFEVTEDISKYTKAKLFQEVG 93 (496)
T ss_pred ceeeccCCCcccCcccceeccCCCCeehhhHHHHHHHHhhccccCcchheecccccceeEEEeccchHhhhcchhhcccC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHH
Q 042356 95 VQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVD 174 (492)
Q Consensus 95 k~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~ 174 (492)
|+|||+||||+|+|++|++|++||+||||+||||+||||||||||+||||||||++||+|+|++||+|.|++++++++||
T Consensus 94 k~TP~fvRFSTV~g~~gsaDt~RD~RGFA~KfYTeeGNwDlVGNNtPVFFirDa~KFPdfiH~~Kp~P~t~l~~~~~~wD 173 (496)
T COG0753 94 KKTPVFVRFSTVAGERGSADTVRDVRGFALKFYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHAQKPDPRTNLRDADTFWD 173 (496)
T ss_pred cccceEEEEEeccCCCCCcccccccccceEEEeeccccceeeccCcceEEeeChhhchhhhhhcCCCCCcccccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHH
Q 042356 175 FFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQD 254 (492)
Q Consensus 175 f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~d 254 (492)
|++.+|||+||++|+||+||+|+||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.|+|+||+++|
T Consensus 174 F~s~~PES~H~vt~l~SDrGiP~syR~M~GfgvHtf~~vN~~Ge~~~VKfH~k~~qGik~Lt~~EA~ki~g~d~d~~~~d 253 (496)
T COG0753 174 FWSLNPESLHQVTWLMSDRGIPASYRHMEGFGVHTFKFVNAKGKRVWVKFHFKPKQGIKNLTWDEAAKLAGKDPDYHQRD 253 (496)
T ss_pred hhhcCcHHHHHHHHHhcCCCCChhhhcCCCccceeEEEEcCCCCEEEEEEEEEeccccccCCHHHHHHHhccCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccc
Q 042356 255 LYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIY 334 (492)
Q Consensus 255 L~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ 334 (492)
|+++|++|+||+|+|+||+|+++|+.+++||++|+||+||++++|++.||+|+||+||+|+|+||||+||+|+|+||||+
T Consensus 254 L~eaIe~Gd~P~W~l~VQvm~~~da~k~~f~~~D~TKvWp~~~~P~~~VG~m~LnrNpdN~FaE~EQaAF~p~nlVPGi~ 333 (496)
T COG0753 254 LYEAIENGDFPEWDLYVQVMPEEDAEKFDFDPLDLTKLWPEEDYPLIEVGTMVLNRNPDNFFAEVEQAAFAPGNLVPGID 333 (496)
T ss_pred HHHHHHcCCCCceEEEEEecChhHhhcCCCCCCccccccccccCCceEeeEEEEccCccchhhhhhhhccccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCCCcc---CCCCCCCCc
Q 042356 335 YSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRH---AEMHPTPPE 411 (492)
Q Consensus 335 ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~~~---~~~~~~~~~ 411 (492)
+|+|||||+|+|+|+|+||||+|+||+|||||+|+|||+||||||+|++.++.+.+||+||++...+. ...+..++.
T Consensus 334 fS~D~lLQgRlFsY~DtqryRlG~N~~qlPvN~P~~p~~~~qrDG~m~~~~~~g~~~y~Pn~~~~~~~~~~~~~~~~~~~ 413 (496)
T COG0753 334 FSPDPLLQGRLFSYGDTQRYRLGPNYHQIPVNRPKCPVHNNQRDGQMRMGINTGPANYEPNSFGDNPEAPEQPGFVEPPE 413 (496)
T ss_pred CCCChhhhhccccchhhhHhhcCCCcccccCCCCCCcccccccCCccccccCCCCcccCccccccCccccccccccCCce
Confidence 99999999999999999999999999999999999999999999999988666669999999975433 244667777
Q ss_pred ccccceeee-ccCCCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHhCCCC
Q 042356 412 ICGGRREKC-IIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRP 490 (492)
Q Consensus 412 ~~~G~~~~~-~~~~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l~~~~ 490 (492)
+++|.+.++ ....+|||+|||+||++|++.||++|+.||+++|++ .++++|++|||+||++||++||++||++|++..
T Consensus 414 ~~~g~~~~~~~~~~~d~f~Q~~~~~~~~~~~ek~~l~~n~~~~l~~-v~~~~i~~r~~~~f~~~d~~~~~~va~~lg~~~ 492 (496)
T COG0753 414 RVEGDKQRRRAISDDDYFSQPRALYRSLSDAEKQHLVDNIAFELSK-VTDPEIKERVLDHFYKIDPDLGKGVAKALGLAL 492 (496)
T ss_pred eeccchhhhccccccccchhHHHHHHhCCHHHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHhcCHHHHHHHHHHhcccc
Confidence 899998864 456889999999999999999999999999999984 345799999999999999999999999999765
Q ss_pred C
Q 042356 491 N 491 (492)
Q Consensus 491 ~ 491 (492)
.
T Consensus 493 ~ 493 (496)
T COG0753 493 E 493 (496)
T ss_pred c
Confidence 4
No 2
>KOG0047 consensus Catalase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-160 Score=1194.69 Aligned_cols=478 Identities=51% Similarity=0.878 Sum_probs=464.4
Q ss_pred CCCCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCC
Q 042356 12 FNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLR 91 (492)
Q Consensus 12 ~~~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~ 91 (492)
.+.+++||++|+||.++.+|+|+|.+||+||||++|+|+|+||||||||||+|||||+||+|+||||+|++++|+|.+|+
T Consensus 19 ~~~~v~Tt~~G~Pi~~~~a~~tvG~rGPiLlQD~~lld~~ahFDRERIPERVvHAkGagA~GyFEvThDIt~~~~a~~f~ 98 (505)
T KOG0047|consen 19 QQPPVITTSNGAPIGNKTASQTVGPRGPILLQDYHLLDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYCKADIFS 98 (505)
T ss_pred cCCceEEcCCCCcccCCcceeecCCCCCeeeehhHHHHHHhhcchhcCchhhhccccCcceeEEEeechHHHHHHHHHHh
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHH
Q 042356 92 APGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWR 171 (492)
Q Consensus 92 ~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~ 171 (492)
.+||+||+++|||+|+|++|++|++||+|||||||||+|||||||+||+||||||||++||.|||++||+|+|+++|+++
T Consensus 99 kvgk~Tp~~vRFSTV~gE~GSaDT~RDPRGFAvKFYTeeGn~DlVgNNtPVFFiRDpikFP~fIHtqKrNPQthlkD~~m 178 (505)
T KOG0047|consen 99 KVGKQTPVLVRFSTVGGESGSADTARDPRGFAVKFYTEEGNWDLVGNNTPVFFIRDPIKFPSFIHTQKRNPQTHLKDPDM 178 (505)
T ss_pred hccccCceEEEEEeecccCCCcccccCCCcceEEEEeccccceeecCCcceEEeecccccchhhhccCCCchhcccCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhh
Q 042356 172 IVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHA 251 (492)
Q Consensus 172 ~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l 251 (492)
+||||+.+|||+||+++|+||||+|++|++|++||+|||+|+|++|+.+||||||+|.+|+++|+.+||.++++.+|||.
T Consensus 179 ~wDf~t~~pEslHqv~~lFsDrGtP~~yrhM~Gyg~hTyk~vNk~G~~~YvkfH~ktdqGiKnLt~e~A~~l~gs~pdya 258 (505)
T KOG0047|consen 179 FWDFLTLRPESLHQVMFLFSDRGTPDGYRHMNGYGSHTYKMVNKEGKAHYVKFHFKTDQGIKNLTVEEAARLAGSDPDYA 258 (505)
T ss_pred hHHHhhcCHhhhhheeeeeccCCCCcccccccccccceEEEEccCCceEEEEEEEecCCCcccCCHHHHHHhcCCCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCC
Q 042356 252 TQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVP 331 (492)
Q Consensus 252 ~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~ 331 (492)
++||+++|++|+||+|+|+||+|+++++++++|||+|.||+||++++|+++||+|+||+|+.|||+|+||+||+|+|+||
T Consensus 259 ~~DLf~aI~~gnyPsW~~yIQvMt~~qa~K~~fnpfDvTKvWP~~~~PL~~VGk~vLn~Np~NyFaevEQ~AF~Pa~~VP 338 (505)
T KOG0047|consen 259 IRDLFNAIENGNYPSWTMYIQVMTPEQAEKFRFNPFDVTKVWPHKDYPLIPVGKMVLNRNPDNYFAEVEQAAFSPAHIVP 338 (505)
T ss_pred HHHHHHHHHcCCCCceEEEEEeeCHhHhhcCCCCccceeccccCcCccccccceEEecCCchHHHHHHHHhccCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCC-CCCCCCccCCceeec-CCCCCCcccCCCCCCCccCCC-CCC
Q 042356 332 GIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPK-CAQHNNHYDGFMNFM-HRDEEIDYFPSRYDPVRHAEM-HPT 408 (492)
Q Consensus 332 Gi~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~-~~~~n~~rdG~m~~~-~~~~~~nY~pns~~~~~~~~~-~~~ 408 (492)
||++|+|+|||+|+|+|+||||+|||+||.|||||||+ |-.+|+||||+|++. |+++.|||+||++......+. +..
T Consensus 339 GIe~S~Dk~LQ~RlFSY~DthRHRLGpNy~QlPVNcPy~~~~~n~qrDG~Mn~~~nqg~~pNYfpn~~~~~~~~~~~~~~ 418 (505)
T KOG0047|consen 339 GIEPSPDKMLQGRLFSYPDTHRHRLGPNYLQLPVNCPYRVRAHNFQRDGPMNVNDNQGGAPNYFPNSFSGPRQQPDPVLE 418 (505)
T ss_pred CcccCCchhheeeeeccCcccccccCCCeeecccCCCccccccccccCCceeeccCCCCCCCcCcccCCccccCCccccC
Confidence 99999999999999999999999999999999999999 788999999999995 999999999999987666553 566
Q ss_pred CCcccccceeeeccCCCCCccccchhcc-CCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHhC
Q 042356 409 PPEICGGRREKCIIPKENNFKQPGERYR-SWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLN 487 (492)
Q Consensus 409 ~~~~~~G~~~~~~~~~~ddf~Qpr~fy~-~l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l~ 487 (492)
+...++|.+.++.+.+++||+|||+||+ .|++++|+|||+||++||+ .+...||+|++++|++||+|||+.|+++|+
T Consensus 419 ~~~~~~G~~yr~~~~~d~nf~Qpr~fy~~vl~~~q~kr~v~n~~~hl~--~~~~~iq~r~~~~ft~v~~dlG~~l~~~l~ 496 (505)
T KOG0047|consen 419 HTEVASGDVYRYEIGDDNNFEQPRAFYEKVLDKEQQKRLVQNIAGHLS--EARDFIQKRAVKYFTQVHKDLGRALAEALN 496 (505)
T ss_pred CceeeecceEEeeccCcccccchHHHHHHHhcHHHHHHHHHHHHHHhh--cchHHHHHHHHHHHHhhchHHHHHHHHHhc
Confidence 6678899999999988999999999998 5899999999999999999 588889999999999999999999999999
Q ss_pred CCCC
Q 042356 488 VRPN 491 (492)
Q Consensus 488 ~~~~ 491 (492)
++++
T Consensus 497 ~~~~ 500 (505)
T KOG0047|consen 497 VKKA 500 (505)
T ss_pred CCcc
Confidence 8764
No 3
>PLN02609 catalase
Probab=100.00 E-value=1.9e-151 Score=1188.79 Aligned_cols=490 Identities=87% Similarity=1.461 Sum_probs=475.5
Q ss_pred CCCCCCCCCCCCCCCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCC
Q 042356 1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD 80 (492)
Q Consensus 1 ~~~~~~~~~~~~~~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~ 80 (492)
|||++.++++..+.+++||++|+||.++++|+|+|.+||+||||++|+|||+||+||||++|++||||+||+|+|+++++
T Consensus 1 m~~~~~~~~~~~~~~~~Tt~~G~pv~~~~~s~t~g~~Gp~llqD~~l~eklahFdrErIpeR~vHAKG~ga~G~F~~t~d 80 (492)
T PLN02609 1 MDPYKYRPSSAYNSPFFTTNSGAPVWNNNSSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD 80 (492)
T ss_pred CCCCCCCCcccCCCCccCcCCCeeCCCCccceecCCCCcchhhhHHHHHhhcccccccccccccccccceEEEEEEECCc
Confidence 99999999998899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCC
Q 042356 81 VSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKP 160 (492)
Q Consensus 81 ~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~ 160 (492)
++++++|++|+.+||+|||++|||+++|+++++|+.+|+|||||||++++|+|||||||+||||++|+++|++||||+|+
T Consensus 81 ~s~~t~a~~f~~~g~~~pv~vRFS~~~G~~~s~D~~rd~RG~AiKf~~~~g~~D~v~nn~PvFf~rdp~~Fpd~i~a~k~ 160 (492)
T PLN02609 81 ISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDMVGNNFPVFFIRDGMKFPDMVHALKP 160 (492)
T ss_pred hhHHHhhhhccCCCceeeEEEEcccCCCCCCCCCcCCCCCeeEEEEEcCCCceeEeeecCceeecCCHHHhhHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHH
Q 042356 161 NPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEA 240 (492)
Q Consensus 161 ~p~t~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea 240 (492)
+|.|+++|++++|+|++.|||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||
T Consensus 161 ~P~t~~~dp~~~~dF~~~~PEs~h~~~~l~s~rg~P~syr~~~~~gvhtF~~vn~~G~~~~Vk~h~~p~~G~~~l~~eeA 240 (492)
T PLN02609 161 NPKTHIQEPWRILDFLSHHPESLHMFTFLFDDRGIPQDYRHMEGFGVHTYKLINKAGKAHYVKFHWKPTCGVKNLLDEEA 240 (492)
T ss_pred CCCCCCCChhHHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCcccccceEEECCCCCEEEEEEEEEeCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcc
Q 042356 241 IKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENE 320 (492)
Q Consensus 241 ~~~~~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e 320 (492)
.++.|.++|||++||+++|++|++|+|+|+||||+++|+.+++|||+|+||+||++++|+++||+|+||++++|+|++||
T Consensus 241 ~~~~g~~~d~l~~DL~~~I~~G~~P~w~l~vQv~~~~d~~~~~f~~~D~Tk~WP~~~~p~i~vG~l~Ln~np~n~f~e~e 320 (492)
T PLN02609 241 VRVGGSNHSHATQDLYDSIAAGNYPEWKLFIQTMDPEDEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNRNIDNFFAENE 320 (492)
T ss_pred HHhhCCCCcHHHHHHHHHHhcCCCceeEEEEEEcCHHHHhcCCCCCCcCCceeCcccceeeEeEEEEEecCCcchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCccccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCCC
Q 042356 321 QLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPV 400 (492)
Q Consensus 321 ~laF~P~~~~~Gi~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~ 400 (492)
|++|+|+++||||++|+|||||+|+|||+|||++|+|+||+|||||||+|+++||||||+|++.++++.|||+|||+++.
T Consensus 321 q~aF~P~~lvpGI~~S~DpmLq~R~faY~ds~~~Rlg~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pn~~~~~ 400 (492)
T PLN02609 321 QLAFCPAIVVPGIYYSDDKLLQTRIFAYADTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPV 400 (492)
T ss_pred hhccccccCCCCccCCCCcccccccccchhHhhccCCCChhhCcccCCCCCcCCCCcCCCccccCCCCCCCccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999986798999999999987
Q ss_pred ccCCCCCCCCcccccceeeeccCCCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCCH--HHHHHHHHHHHhhCHHH
Q 042356 401 RHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTH--EIRHIWISYWSQACKSL 478 (492)
Q Consensus 401 ~~~~~~~~~~~~~~G~~~~~~~~~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~~--~I~~r~l~~f~~vD~dl 478 (492)
+....+..++..+.|.+.++.+.++|||+|||+||++|+++||++||+||+++|+ +|++ +|+.|||++|++||++|
T Consensus 401 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~~lv~n~~~~l~--~~~~~~~~r~~~~~~~~~~d~~l 478 (492)
T PLN02609 401 RHAERVPIPHPPLSGRREKCKIEKENNFKQPGERYRSWSPDRQERFIKRWVDALS--DPRVTHEIRSIWISYWSQCDKSL 478 (492)
T ss_pred ccCCCcCCCCceeccceEEccCCCCCcccchhHHHHhCCHHHHHHHHHHHHHHhh--cCchhHHHHHHHHHHHHHhCHHH
Confidence 7666666677788899888877778999999999999999999999999999999 5765 56788899999999999
Q ss_pred HHHHHHHhCCCCCC
Q 042356 479 GQKLASRLNVRPNI 492 (492)
Q Consensus 479 g~rVa~~l~~~~~~ 492 (492)
|++|+++|+++++|
T Consensus 479 g~~v~~~~~~~~~~ 492 (492)
T PLN02609 479 GQKLASRLNVKPSM 492 (492)
T ss_pred HHHHHHHhCCCCCC
Confidence 99999999998875
No 4
>cd08154 catalase_clade_1 Clade 1 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 1 catalases are found in bacteria, algae, and plants; they have a relatively small subunit size of 55 to 69 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. They appear to form tetramers. In eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=1.5e-147 Score=1157.02 Aligned_cols=469 Identities=62% Similarity=1.033 Sum_probs=458.8
Q ss_pred cccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCc
Q 042356 16 FFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGV 95 (492)
Q Consensus 16 ~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk 95 (492)
++||++|+||.++++|+|+|.+||+||||++|+|||+||+||+|++|++||||+||+|+|+++++++++++|++|+.+||
T Consensus 1 ~~t~~~G~pv~~~~~s~t~g~~Gp~llqD~~l~ekl~hf~reripeR~vHAKG~ga~G~F~vt~d~~~~t~a~~f~~~g~ 80 (469)
T cd08154 1 TLTTNQGAPVGDNQNSQTVGPRGPVLLEDYHLIEKLAHFDRERIPERVVHARGAGAHGYFEAYGDISDYTRASFLQEPGK 80 (469)
T ss_pred CccCCCCcCcCCcccceecCCCCCchhhhHHHHHHhhhhccCCCccccccCceeeEEEEEEECCchhHHHhhhhccCCCc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred eeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHH
Q 042356 96 QTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDF 175 (492)
Q Consensus 96 ~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f 175 (492)
+|||++|||+++|+++++|+.+|+|||||||++++|+|||||||+||||++|+++|++||||+|++|.|+++|++++|+|
T Consensus 81 ~~Pv~vRFS~~~g~~~~~D~~rd~RGfAvKf~~~eg~~Dlv~nn~PvFfird~~~Fp~~i~a~k~~P~t~~~dp~~~~dF 160 (469)
T cd08154 81 KTPVFVRFSTVIHGKGSPETLRDPRGFAVKFYTEEGNWDLVGNNLPVFFIRDAIKFPDMIHALKPSPVTNIQDPNRIFDF 160 (469)
T ss_pred cceeEEecccCCCCCCCCccCCCCCeeEEEEEcCCCceeeeeecCCccccCCHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHH
Q 042356 176 FSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDL 255 (492)
Q Consensus 176 ~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL 255 (492)
++.|||++|+++|++|+||+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.|.++|||++||
T Consensus 161 ~~~~PEs~h~~~~l~s~rg~P~sy~~~~g~gvhtf~~vn~~G~~~~VK~h~~p~~G~~~l~~eeA~~~~g~~~d~l~~dL 240 (469)
T cd08154 161 FSHVPESTHMLTFLYSDWGTPASYRHMDGSGVHTYKWVNAEGKVVYVKYHWKPKQGVKNLTAEEAAEVQGKNFNHATQDL 240 (469)
T ss_pred HHcChHHHHHHHHHhcCCCCCCCcccCCccccceeEEEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhhcCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCcccc
Q 042356 256 YDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYY 335 (492)
Q Consensus 256 ~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~p 335 (492)
+++|++|++|+|+|+||||+++|+.+++|||+|+||+||++++|+++||+|+||++++|+|++|||++|+|+++||||++
T Consensus 241 ~~~I~~G~~p~w~l~vQv~~~~D~~~~~f~~~D~Tk~WP~~~~p~i~vG~l~Ln~np~n~f~e~eq~aF~P~~lvpGI~~ 320 (469)
T cd08154 241 YDAIAAGNYPEWELYVQIMDPKDLDKLDFDPLDDTKIWPEDQFPLKPVGKMTLNKNPDNFFAEVEQVAFSPGNLVPGIEP 320 (469)
T ss_pred HHHHhcCCCceEEEEEEEcCHHHhhcCCCCCCcCCcccCCcccceEEeEEEEEecCCcchhhhhhhhhccccCCCCCcCC
Confidence 99999998799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCCCccCCCCCCCCccccc
Q 042356 336 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGG 415 (492)
Q Consensus 336 s~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~~~~~~~~~~~~~~~G 415 (492)
|+|||||+|++||+|||++|+|+||+|||||||+|+++||||||+|++.++++.|||+|||++++...+.+..++..++|
T Consensus 321 S~DpmLq~R~faY~ds~r~Rlg~N~~qlPvN~p~~~~~~~~rdG~m~~~~~~~~~nY~pns~~~~~~~~~~~~~~~~~~g 400 (469)
T cd08154 321 SDDKMLQGRLFSYSDTQRYRLGPNYLQLPINAPKAAVHNNQRDGQMNYGHDTSDVNYEPSRLDGLPEAPKYPYSQPPLSG 400 (469)
T ss_pred CCCcccccccccchhHhhccCCCChhhCCCCCCCCCCCCCCcCCCccccCCCCCCcccCCCCCCCccCCCcCCCCeeEee
Confidence 99999999999999999999999999999999999999999999999988899999999999987777777777888999
Q ss_pred ceeeeccCCCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHh
Q 042356 416 RREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRL 486 (492)
Q Consensus 416 ~~~~~~~~~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l 486 (492)
.+.++.+.++|||+|||+||++|+++||++||+||+++|+ +|+++||+||+++|++||++||++|+++|
T Consensus 401 ~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~r~~~~~~~~d~~~~~~v~~~~ 469 (469)
T cd08154 401 TTQQAPIAKTNNFKQAGERYRSFSEEEQENLIKNLVVDLS--DVNEEIKLRMLSYFSQADPDYGERVAEGL 469 (469)
T ss_pred eEEeccCCCCCcccCcHHHHHhCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHHHHHHhhC
Confidence 9999887788999999999999999999999999999999 68999999999999999999999999875
No 5
>PRK11249 katE hydroperoxidase II; Provisional
Probab=100.00 E-value=7.4e-143 Score=1172.87 Aligned_cols=473 Identities=45% Similarity=0.764 Sum_probs=453.6
Q ss_pred CCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCC
Q 042356 14 APFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAP 93 (492)
Q Consensus 14 ~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~ 93 (492)
.+.|||++|+||.++++|+++|.+||+||||++|+|||+||||||||||+|||||+||+|+|+++++++++|+|.+|+++
T Consensus 74 ~~~~tt~~G~pv~~~~~sl~~g~~Gp~ll~D~~l~ekl~hFdrEriPER~vHAkG~~a~G~F~~t~~~s~~t~A~~f~~~ 153 (752)
T PRK11249 74 GYALTTNQGVRIADDQNSLRAGSRGPSLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKAAFLQDP 153 (752)
T ss_pred CCceecCCCeecCCcccceecCCCCCchhhhHHHHHhhcccccccCchhheecccceEEEEEEECccHHHhhhcccccCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCC----h
Q 042356 94 GVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----N 169 (492)
Q Consensus 94 Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~----~ 169 (492)
|++|||++|||+++|+++++|+.||+|||||||||+||+|||||||+|||||+|+++|++||||+|++|.|++++ +
T Consensus 154 g~~tPv~~RFStv~G~~gs~Dt~rd~RGfAvKFyt~eGn~Dlvgnn~PvFfi~d~~kFpd~iha~k~~P~~~~~~~~~~~ 233 (752)
T PRK11249 154 GKITPVFVRFSTVQGPRGSADTVRDIRGFATKFYTEEGNFDLVGNNTPVFFIQDAIKFPDFVHAVKPEPHNEIPQGQSAH 233 (752)
T ss_pred CceeeEEEecccCCCCCCCCCcCCCCCceEEEEEcCCCccceeeecCcceecCCHHHhhHHHhhcCCCCCccCcccCCCh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997765 8
Q ss_pred HHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCch
Q 042356 170 WRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHS 249 (492)
Q Consensus 170 ~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d 249 (492)
+++|+|++.|||++||++|++|+|++|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++|+.++.+.++|
T Consensus 234 ~~~~dF~s~~Pes~h~~~~~~s~r~~P~s~r~~~gfgvhtF~~vna~G~~~~VKfh~kP~~G~~~l~~~Ea~~~~~~dpD 313 (752)
T PRK11249 234 DTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPVAGKASLVWDEAQKLTGRDPD 313 (752)
T ss_pred HHHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCcccccceEEEcCCCCEEEEEEEEEECCccccCCHHHHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred hhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhccccccccccc
Q 042356 250 HATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIV 329 (492)
Q Consensus 250 ~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~ 329 (492)
||++||+++|++|++|+|+|+||||+++|+++|+|||+|+||+|||+++|+++||+|+|+++++|+|++|||++|+|+|+
T Consensus 314 flr~DL~eaIe~G~~P~WeL~VQl~~~~d~~~~~f~i~D~TK~WPe~~~P~~~VGkLtLnrn~~n~fae~eqvaF~P~~l 393 (752)
T PRK11249 314 FHRRDLWEAIEAGDYPEYELGVQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAETEQVAFHPGHI 393 (752)
T ss_pred HHHHHHHHHHHcCCCceEEEEEEEcChHHhccCCCCCCcCCccCCcccCcceEeEEEEecCCCCcchhhhheeeccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCchhhhhhhhhhHHHHHhhcC-CCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCC--CccC---
Q 042356 330 VPGIYYSNDKLLQTRIFSYADTQRHRLG-PNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDP--VRHA--- 403 (492)
Q Consensus 330 ~~Gi~ps~d~ilq~R~~aY~~s~~~R~g-~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~--~~~~--- 403 (492)
||||++|+|||||+|+|+|.|||++|+| +||+|||||||+||++||||||.|++.++.+.|||+|||+.+ +...
T Consensus 394 vpGI~~S~DplLq~R~fsY~dtq~~Rlgg~N~~qlpvN~p~~~~~n~~rdG~~~~~~~~g~~~Y~pns~~~~~~~~~~~~ 473 (752)
T PRK11249 394 VPGIDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMTIDTGPANYEPNSINGNWPRETPPA 473 (752)
T ss_pred CCCccCCCCcccccccccchHHhhccCCCCchhhcccccccCCcCCCCcCCCCcccCCCCCCcccCCCCCCCCcccCccc
Confidence 9999999999999999999999999997 999999999999999999999999998776799999999964 2222
Q ss_pred ---CCCCCCCcccccceeeeccC-CCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCC-HHHHHHHHHHHHhhCHHH
Q 042356 404 ---EMHPTPPEICGGRREKCIIP-KENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVT-HEIRHIWISYWSQACKSL 478 (492)
Q Consensus 404 ---~~~~~~~~~~~G~~~~~~~~-~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~-~~I~~r~l~~f~~vD~dl 478 (492)
..|..++..++|.+.|+... .+|||+|||+||++|++.||+|||+||+++|+ +|. ++||+||+++|.+||++|
T Consensus 474 ~~~~~~~~~~~~~~g~~~r~~~~~~~d~~~Q~~~~~~~~~~~e~~~~~~~~~~~l~--~v~~~~i~~r~~~~~~~vd~~l 551 (752)
T PRK11249 474 PKRGGFESYQERVEGNKVRERSPSFGDYYSQPRLFWLSQTPIEQRHIIDAFSFELG--KVVRPYIRERVVDQLAHIDLTL 551 (752)
T ss_pred ccccCccCCCceeeccEEeccCCCCCccccccHHHHhcCCHHHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHH
Confidence 23445666789998888764 57999999999999999999999999999999 676 789999999999999999
Q ss_pred HHHHHHHhCC
Q 042356 479 GQKLASRLNV 488 (492)
Q Consensus 479 g~rVa~~l~~ 488 (492)
|++|+++|++
T Consensus 552 ~~~va~~l~~ 561 (752)
T PRK11249 552 AQAVAENLGI 561 (752)
T ss_pred HHHHHHHhCC
Confidence 9999999997
No 6
>cd08156 catalase_clade_3 Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=2.2e-136 Score=1066.96 Aligned_cols=427 Identities=45% Similarity=0.788 Sum_probs=416.3
Q ss_pred CCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeec
Q 042356 58 RIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVG 137 (492)
Q Consensus 58 ~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~ 137 (492)
|||||++||||+||+|+|+++++++++|+|++|+++||+|||++|||+++|+++++|+.+|+|||||||||+||+|||||
T Consensus 1 rIPER~vHAKG~ga~G~F~~t~d~s~~t~A~~f~~~gk~tPv~vRFStv~G~~gs~Dt~rd~RGfAvKF~t~eG~~DlV~ 80 (429)
T cd08156 1 RIPERVVHAKGAGAFGTFEVTHDITKYTKAKIFSEVGKKTPVFVRFSTVAGERGSADTERDPRGFALKFYTEEGNWDLVG 80 (429)
T ss_pred CCCcccccCccceEEEEEEECCCchHHHhhhhccCCCceeeEEEecccCCCCCCCCccCCCcCeEEEEEEcCCCceeeee
Confidence 79999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred ccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCC
Q 042356 138 NNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAG 217 (492)
Q Consensus 138 ~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G 217 (492)
||+||||++||++|++||||+|++|.|+++|++++|+|++.|||++|+++|++++||+|+||++|+|||+|||+|+|++|
T Consensus 81 nn~PvFfirdp~~Fp~~i~a~k~~P~t~~~d~~~~~df~~~~Pes~h~~~~l~s~rg~P~sy~~~~~~gvhtf~~vn~~G 160 (429)
T cd08156 81 NNTPVFFIRDPIKFPDFIHTQKRNPQTNLKDPDMFWDFWSLSPESLHQVTILFSDRGIPDGYRHMNGYGSHTFSLVNAKG 160 (429)
T ss_pred ecCcccccCCHHHhhHhhhccCCCCCCCCCCHHHHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCccccceEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCC
Q 042356 218 KAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDI 297 (492)
Q Consensus 218 ~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~ 297 (492)
+.+||||||+|.+|+++|+++||.++.|.++|||++||+++|++|++|+|+|+||||+++|+.+++|||+|+||+||+++
T Consensus 161 ~~~~Vk~h~~p~~G~~~l~~eea~~~~g~~~d~l~~dL~~~I~~G~~P~w~l~vQv~~~~d~~~~~f~~~D~Tk~Wp~~~ 240 (429)
T cd08156 161 ERFWVKFHFKTDQGIKNLTNEEAAELAGEDPDYAQRDLFEAIERGDFPSWTLYVQVMPEEDAEKYRFNPFDLTKVWPHKD 240 (429)
T ss_pred CEEEEEEEEEeCCCCCCCCHHHHHHhhCCCCCHHHHHHHHHHhcCCCceEEEEEEEechhHhhcCCCCCCcCCccCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEEeCCCCcchhhhcccccccccccCCccccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCcc
Q 042356 298 LPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHY 377 (492)
Q Consensus 298 ~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~r 377 (492)
+|+++||+|+||++++|+|++|||++|+|+++||||++|+|||||+|+|||+|||++|+|+||+|||||||+|+++||||
T Consensus 241 ~p~i~vG~l~Ln~n~~n~f~e~eq~aF~P~~lvpGI~~S~Dp~Lq~R~faY~dt~~~Rlg~N~~qlPvN~p~~~~~n~~r 320 (429)
T cd08156 241 YPLIEVGKLELNRNPENYFAEVEQAAFSPSNLVPGIGFSPDKMLQGRLFSYADAHRYRLGVNYHQLPVNRPKCPVNNYQR 320 (429)
T ss_pred cceEEeEEEEEecCCcchhhhhheecccCcCCCCCccCCCCccccccccccHhhhhcCCCCCHhhCCCCCCCCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeec-CCCCCCcccCCCCCCCccCCCCCCCCcccccceeeeccC-CCCCccccchhccCCCHHHHHHHHHHHHHhcC
Q 042356 378 DGFMNFM-HRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIP-KENNFKQPGERYRSWAPDRQERFICRWVDALS 455 (492)
Q Consensus 378 dG~m~~~-~~~~~~nY~pns~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~ 455 (492)
||+|++. ++++.|||+|||+.+....+.+..++..++|.+.++.+. ++|||+|||+||++|+++||++||+||+++|+
T Consensus 321 dG~m~~~~~~~~~~nY~pns~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~d~f~Q~~~~~~~~~~~~q~~li~n~a~~l~ 400 (429)
T cd08156 321 DGAMRVDGNGGGAPNYEPNSFGGPPEDPEYAEPPLPVSGDADRYNYRDDDDDYTQAGDLYRLVSEDERERLVENIAGHLK 400 (429)
T ss_pred CCCccccCCCCCCCcccCCCCCCCccCCCcCCCCceEeeeEEEccccCccchhhhhHHHHhcCCHHHHHHHHHHHHHHHh
Confidence 9999997 678899999999998776667777778899999998864 78999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhCHHHHHHHHHHh
Q 042356 456 DPRVTHEIRHIWISYWSQACKSLGQKLASRL 486 (492)
Q Consensus 456 ~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l 486 (492)
+|+++||+|||++|++||+|||+||+++|
T Consensus 401 --~v~~~i~~r~~~~~~~~d~~lg~~va~~l 429 (429)
T cd08156 401 --GAPEFIQERQVAHFYKADPDYGERVAKAL 429 (429)
T ss_pred --CCCHHHHHHHHHHHHhhCHHHHHHHHhhC
Confidence 68999999999999999999999999986
No 7
>cd08155 catalase_clade_2 Clade 2 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 2 catalases are mostly found in bacteria and fungi; they have a large subunit size of 75 to 84 kDa, and bind a heme d group buried deep inside the structure. They appear to form tetramers. In eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=3e-134 Score=1051.88 Aligned_cols=430 Identities=49% Similarity=0.834 Sum_probs=413.1
Q ss_pred CCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCcee
Q 042356 55 DRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFD 134 (492)
Q Consensus 55 ~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~D 134 (492)
+|||||||++||||+||+|+|+++++++++|++++|+++|++|||++|||+++|+++++|+.+|+|||||||++++|+||
T Consensus 1 ~rErIPER~vHAKG~ga~G~F~~t~d~~~~t~a~~f~~~g~~~pv~~RFS~~~g~~~s~D~~rd~RG~AiKf~~~~g~~D 80 (443)
T cd08155 1 DHERIPERVVHARGSGAHGYFQVYESLSQYTKAKFLQDPGKKTPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTEEGNYD 80 (443)
T ss_pred CCccCccccccccccceEEEEEECCchhHHHhhhhccCCCceeeEEEEcccCCCCCCCCccCCCCCeEEEEEEcCCCcee
Confidence 68999999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred eecccccccccCChhhhHHHHHHhCCCCCCCCCCh----HHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCccccee
Q 042356 135 LVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQEN----WRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTY 210 (492)
Q Consensus 135 lv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~----~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf 210 (492)
|||||+||||++|+++|++||||+|++|.|+++|| +++|+|++.|||++|+++|++++||+|.||++|+|||+|||
T Consensus 81 ~v~nn~PvFf~rd~~~Fp~~i~a~k~~P~t~~~dp~~~~~~~~dF~~~~Pes~h~~~~l~s~rg~P~sy~~~~~~gvhtf 160 (443)
T cd08155 81 LVGNNIPVFFIQDAIKFPDLIHAVKPEPHNEMPQAQSAHDTFWDFVSLQPESAHMVMWAMSDRAIPRSYRMMEGFGVHTF 160 (443)
T ss_pred eeeecCCceecCCHHHhhHHHhhccCCCCCCCCCcchhhhhHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCcccccce
Confidence 99999999999999999999999999999999998 56999999999999999999999999999999999999999
Q ss_pred eeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCc
Q 042356 211 MLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVT 290 (492)
Q Consensus 211 ~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~T 290 (492)
+|+|++|+++||||||+|.+|+++|+++||.++.+.++|||++||+++|++|+||+|+|+||||+++|+..++||++|+|
T Consensus 161 ~~vna~G~~~~Vk~~~~p~qG~~~l~~eeA~~~~~~~~d~l~~dL~~~I~~G~~p~w~l~vQv~~~~d~~~~~f~~~D~T 240 (443)
T cd08155 161 RLVNAQGKSTFVKFHWKPVLGVHSLVWDEAQKIAGKDPDFHRRDLWEAIESGDYPEWELGVQLIDEEDEFKFDFDILDPT 240 (443)
T ss_pred EEEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhhCCCCchHHHHHHHHHhcCCCceEEEEEEEcCHHHHhcCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccccCCchhhhhhhhhhHHHHHhhc-CCCCCCCCCCCCC
Q 042356 291 KTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRL-GPNYLQLPVNAPK 369 (492)
Q Consensus 291 k~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps~d~ilq~R~~aY~~s~~~R~-g~N~~qlPvN~p~ 369 (492)
|+||++++|+++||+|+|+++++|+|++|||++|+|+++||||++|+|||||+|+|||+|||++|+ |+||+|||||||+
T Consensus 241 k~WP~~~~p~i~~G~l~Ln~np~n~f~e~eq~aF~P~~lvpGI~~S~DpmLq~R~faY~ds~r~RlgG~N~~qlPvN~P~ 320 (443)
T cd08155 241 KLIPEELVPVQRVGKMVLNRNPDNFFAETEQVAFCPANVVPGIDFSNDPLLQGRLFSYLDTQLSRLGGPNFHELPINRPV 320 (443)
T ss_pred CcCCccccceEEeEEEEEecCCcchhhhhhhhcccCcCCCCCccCCCCcccccccccchHhhhccCCCCChhhCcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 7999999999999
Q ss_pred CCCCCCccCCceeecCCCCCCcccCCCCCCCcc--CC----CCCCCCcccccceeeeccCC-CCCccccchhccCCCHHH
Q 042356 370 CAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRH--AE----MHPTPPEICGGRREKCIIPK-ENNFKQPGERYRSWAPDR 442 (492)
Q Consensus 370 ~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~~~--~~----~~~~~~~~~~G~~~~~~~~~-~ddf~Qpr~fy~~l~~~e 442 (492)
||++||||||+|++.++++.|||+|||+.+... .. .+..++..++|.+.++.+.+ ++||+|||+||++|+++|
T Consensus 321 ~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~Q~~~ly~~~~~~e 400 (443)
T cd08155 321 CPVHNNQRDGHMRMTINKGRVNYFPNSLGAGPPRAASPAEGGFVHYPEKVEGPKIRIRSESFADHYSQARLFWNSMSPVE 400 (443)
T ss_pred CCcCCCCcCCCccccCCCCCCcccCCCCCCCCccccccccccccCCccceecceEecccCCCCccccccHHHHhcCCHHH
Confidence 999999999999998766799999999987432 11 35566778899988887765 799999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCC-HHHHHHHHHHHHhhCHHHHHHHHHHh
Q 042356 443 QERFICRWVDALSDPRVT-HEIRHIWISYWSQACKSLGQKLASRL 486 (492)
Q Consensus 443 k~~Li~Nia~~L~~~~v~-~~I~~r~l~~f~~vD~dlg~rVa~~l 486 (492)
|++||+||+++|+ +|+ ++||+|||++|++||++||++|+++|
T Consensus 401 ~~~lv~n~~~~l~--~~~~~~i~~~~~~~f~~~d~~~g~~v~~~l 443 (443)
T cd08155 401 KEHIISAFTFELS--KVETPEIRERVVDHLANIDEDLAKKVAKGL 443 (443)
T ss_pred HHHHHHHHHHHHh--CCCcHHHHHHHHHHHHhhCHHHHHHHHhhC
Confidence 9999999999999 577 78999999999999999999999986
No 8
>cd08157 catalase_fungal Fungal catalases similar to yeast catalases A and T. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. This family of fungal catalases has a relatively small subunit size, and binds a protoheme IX (heme b) group buried deep inside the structure. Fungal catalases also bind NADPH as a second redox-active cofactor. They form tetramers; in eukaryotic cells, catalases are typically located in peroxisomes. Saccharomyces cerevisiae catalase T is found in the cytoplasm, though.
Probab=100.00 E-value=1.4e-133 Score=1057.87 Aligned_cols=444 Identities=45% Similarity=0.763 Sum_probs=426.0
Q ss_pred cchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCc
Q 042356 42 LEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRG 121 (492)
Q Consensus 42 ~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG 121 (492)
|||++|+|||+||+||||++|++||||+||+|+|+|+++++++|+|+||+.+||+|||++|||+++|+++++|+.+|+||
T Consensus 1 l~d~~l~e~l~~f~reripeR~vHAKG~ga~G~F~vt~d~s~~t~a~~f~~~gk~~pv~vRFSt~~g~~~~~D~~rd~RG 80 (451)
T cd08157 1 LQDFHLIDTLAHFDRERIPERVVHAKGAGAYGEFEVTDDISDITSADMLQGVGKKTPCLVRFSTVGGEKGSADTVRDPRG 80 (451)
T ss_pred CchHHHHHHHHhhccCCCccccccCCcccEEEEEEECCChhHHHhhhhccCCCceeeEEEecccCCCCCCCCCcCCCcCe
Confidence 79999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred eeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHHHHHHHhcCCCCCCCcCC
Q 042356 122 FAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRH 201 (492)
Q Consensus 122 ~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~ 201 (492)
|||||++++|+|||||||+||||++|+++|++|+++++++|.|+++|++++|+|++.+||++|+++|+++++|+|.||++
T Consensus 81 ~AiKf~t~eg~~DlV~nn~PvFfird~~~F~~~i~a~~~~p~~~~~d~~~~~df~~~~Pes~~~~~~l~s~~g~p~sy~~ 160 (451)
T cd08157 81 FAVKFYTEEGNWDWVFNNTPVFFIRDPIKFPHFIHSQKRDPQTNLKDSTMFWDYLSQNPESIHQVMILFSDRGTPASYRS 160 (451)
T ss_pred EEEEEEcCCCceeeeeecCcccccCCHHHHHHHHHhcccCCCCCCCChHHHHHHHhhChHHHHHHHHHhccCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCC
Q 042356 202 MEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDK 281 (492)
Q Consensus 202 ~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~ 281 (492)
|+|||+|||+|+|++|+.+||||||+|.+|+++|+++|+.++++.++|||++||+++|++|++|+|+|+||||+++|+..
T Consensus 161 ~~~~g~htf~~vn~~G~~~~vK~~~~P~~G~~~l~~~ea~~~~~~~~d~l~~dL~~~i~~g~~p~w~l~vQl~~~~d~~~ 240 (451)
T cd08157 161 MNGYSGHTYKWVNPDGSFKYVQFHLKSDQGPKFLTGEEAARLAGSNPDYATKDLFEAIERGDYPSWTVYVQVMTPEQAEK 240 (451)
T ss_pred CCccccceeEEECCCCCEEEEEEEEEECCCcccCCHHHHHhhcCCCCChhHhhHHHHHhcCCCceEEEEEEEeCHHHHhh
Confidence 99999999999999999999999999999999999999999988999999999999999999889999999999999989
Q ss_pred CCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccccCCchhhhhhhhhhHHHHHhhcCCCCC
Q 042356 282 FDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYL 361 (492)
Q Consensus 282 ~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps~d~ilq~R~~aY~~s~~~R~g~N~~ 361 (492)
++|+|+|+||+|||+++|+++||+|+|++|++|+|++|||++|+|||+++||+||+|||||+|++||++|+++|+|+||+
T Consensus 241 ~~f~i~D~Tk~WPe~~~P~~~vG~l~Ln~~~~~~~~e~eq~aF~P~~~vpGi~ps~DpiLq~R~~aY~ds~~~R~g~N~~ 320 (451)
T cd08157 241 LRFNIFDLTKVWPHKDFPLRPVGKLTLNENPKNYFAEIEQAAFSPSHMVPGIEPSADPVLQARLFSYPDAHRHRLGPNYQ 320 (451)
T ss_pred CCCCCCcCCcccCcccCccEEeEEEEecCCChhHHhHhhhhcccccccCCCccCCCCchhcccccchHHHHHhccCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC-CCCCCC-ccCCceeec-CCCCCCcccCCCCCCCccC--CCCCCCCcccccceeeecc-CCCCCccccchhc
Q 042356 362 QLPVNAPK-CAQHNN-HYDGFMNFM-HRDEEIDYFPSRYDPVRHA--EMHPTPPEICGGRREKCII-PKENNFKQPGERY 435 (492)
Q Consensus 362 qlPvN~p~-~~~~n~-~rdG~m~~~-~~~~~~nY~pns~~~~~~~--~~~~~~~~~~~G~~~~~~~-~~~ddf~Qpr~fy 435 (492)
|||||||+ |+++|+ ||||+|++. |+++.|||+||++.+.... ..+..++..++|.+.++.. .++|||+|||+||
T Consensus 321 qlPvN~p~~~~~~~~~~rdG~m~~~~~~~~~~nY~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~Q~~~~y 400 (451)
T cd08157 321 QLPVNRPKTSPVYNPYQRDGPMSVNGNYGGDPNYVSSILPPTYFKKRVDADGHHENWVGEVVAFLTEITDEDFVQPRALW 400 (451)
T ss_pred hCCCCCCCcCCCCCCcCcCCCCcccCCCCCCCCcCCCCCCCCCcccccccCCCCceeeeeeEeecccccccchhccHHHH
Confidence 99999999 999887 999999997 6789999999999864332 2344556678999998876 4779999999999
Q ss_pred cC-CCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHhC
Q 042356 436 RS-WAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLN 487 (492)
Q Consensus 436 ~~-l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l~ 487 (492)
++ |++.||++||+||+++|+ +|+++||+||+++|++||++||++|+++|+
T Consensus 401 ~~~~~~~~k~~li~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~g~~v~~~~~ 451 (451)
T cd08157 401 EVVGKPGQQERFVKNVAGHLS--GAPPEIRKRVYEIFARVNPDLGKRIEKATE 451 (451)
T ss_pred HhhCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHHHHHHHhhC
Confidence 84 799999999999999999 689999999999999999999999999985
No 9
>cd00328 catalase Catalase heme-binding enzyme. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Most catalases exist as tetramers of 65KD subunits containing a protoheme IX group buried deep inside the structure. In eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=1.6e-130 Score=1025.37 Aligned_cols=427 Identities=48% Similarity=0.801 Sum_probs=408.6
Q ss_pred CCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeec
Q 042356 58 RIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVG 137 (492)
Q Consensus 58 ~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~ 137 (492)
|||||++||||+||+|+|++++++++++++++|+.+|++|||++|||+++|+++++|+.+|+|||||||++++|+|||||
T Consensus 1 riPER~~HAKG~ga~G~F~v~~d~~~~t~a~~f~~~g~~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~~g~~D~v~ 80 (433)
T cd00328 1 RIPERVVHARGAGAFGYFTAYGDWSDISAAAFFSAIGKKTPVFVRFSTVVGGAGSADTVRDPHGFATKFYTEEGNFDLVG 80 (433)
T ss_pred CCCcccccCcccceEEEEEECCChhHHHhhhhccCCCceeeEEEecccCCCCCCCCccCCCCCeeEEEEecCCCceeEee
Confidence 79999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred ccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCC
Q 042356 138 NNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAG 217 (492)
Q Consensus 138 ~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G 217 (492)
||+||||++|+++|++||||+|++|.|+++|++++|+|++.|||++|+++|++++|++|+||++|+|||+|||+|+|++|
T Consensus 81 nn~PvFf~~d~~~F~~~i~a~k~~P~t~~~d~~~~~~f~~~~Pes~h~~~~~~s~r~~P~sy~~~~~~gvhtf~~vn~~G 160 (433)
T cd00328 81 NNTPIFFIRDAIKFPDFIHAQKPNPQTALPDADRFWDFLSLRPESLHQVSFLFSDRGIPAAYRHMNGYGSHTFKLVNANG 160 (433)
T ss_pred ecCceeecCCHHHhhHhhhccCCCCCCCCCCHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCcccCCccccceEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCC
Q 042356 218 KAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDI 297 (492)
Q Consensus 218 ~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~ 297 (492)
+.+||||||+|.+|+++|+++||.++.+.++|||++||+++|++|++|+|+|+||||+++|+.+++|||+|+||+||+++
T Consensus 161 ~~~~vk~~~~p~~G~~~l~~eea~~~~~~~~d~l~~dL~~~i~~G~~P~w~l~vQv~~~~d~~~~~f~~~D~Tk~WP~~~ 240 (433)
T cd00328 161 KVHYVKFHWKTDQGIANLVWEEAARLAGEDPDYHRQDLFEAIEAGDYPSWELYIQVMTFNDAEKFPFNPLDPTKVWPEEL 240 (433)
T ss_pred CEEEEEEEEEeCCCCCCCCHHHHHHhhcCCCchhhhhHHHHHhCCCCceEEEEEEEcCHHHHhcCCCCCCcCCcccCCcC
Confidence 99999999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEEeCCCCcchhhhcccccccccccCCccccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCcc
Q 042356 298 LPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHY 377 (492)
Q Consensus 298 ~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~r 377 (492)
+|+++||+|+||++++|+|++|||++|+|+++||||++|+|||||+|++||+|||++|+|+||+|||||||+|+++||||
T Consensus 241 ~p~i~vG~l~Ln~n~~n~f~e~eq~aF~P~~lvpGI~~S~DplLq~R~faY~ds~~~R~g~N~~qlpvN~p~~~~~n~~r 320 (433)
T cd00328 241 VPLIVVGKLVLNRNPLNFFAEVEQAAFDPGHIVPGVEFSEDPLLQGRLFSYADTQLYRLGPNFQQLPVNRPYAPVHNNQR 320 (433)
T ss_pred cccEEeEEEEeecCCcchhhhhhhhccCCcCCCCCccCCCCcccccccccchhhhhcCCCCCHhhCcccCCCCCcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCCCCCCcccCCCCCCCccCCCCCC----CCcccccceeeecc-CCCCCccccchhccCCCHHHHHHHHHHHHH
Q 042356 378 DGFMNFMHRDEEIDYFPSRYDPVRHAEMHPT----PPEICGGRREKCII-PKENNFKQPGERYRSWAPDRQERFICRWVD 452 (492)
Q Consensus 378 dG~m~~~~~~~~~nY~pns~~~~~~~~~~~~----~~~~~~G~~~~~~~-~~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~ 452 (492)
||+|++.++.+.|||+|||+++......+.. +...+.|.+.++.. .++|||+|||+||++|++.||++||+||++
T Consensus 321 dG~m~~~~~~~~~nY~pns~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~Q~~~~~~~~~~~ek~~lv~n~~~ 400 (433)
T cd00328 321 DGAGNMNDNTGVPNYEPNAKDVRYPAQGAPKFDRGHFSHWKSGVNREASTTNDDNFTQARLFYRSLTPGQQKRLVDAFRF 400 (433)
T ss_pred CCCccccCCCCCCCccCCCCCCCCCCcccccccCCCceeeecceEEecccCCcchhhhhHHHHhcCCHHHHHHHHHHHHH
Confidence 9999998666699999999988655433222 23456787777764 577999999999999999999999999999
Q ss_pred hcCCCCC-CHHHHHHHHHHHHhhCHHHHHHHHHHh
Q 042356 453 ALSDPRV-THEIRHIWISYWSQACKSLGQKLASRL 486 (492)
Q Consensus 453 ~L~~~~v-~~~I~~r~l~~f~~vD~dlg~rVa~~l 486 (492)
+|+ +| +++||+||+++|.+||++||++|+++|
T Consensus 401 ~l~--~v~~~~i~~r~~~~f~~~d~~~g~~va~~~ 433 (433)
T cd00328 401 ELA--DAVSPQIQQRVLDQFAKVDAAAAKRVAKAL 433 (433)
T ss_pred HHh--CCCCHHHHHHHHHHHHHhCHHHHHHHHhhC
Confidence 999 67 889999999999999999999999986
No 10
>PF00199 Catalase: Catalase; InterPro: IPR011614 Catalases (1.11.1.6 from EC) are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects []. Hydrogen peroxide is produced as a consequence of oxidative cellular metabolism and can be converted to the highly reactive hydroxyl radical via transition metals, this radical being able to damage a wide variety of molecules within a cell, leading to oxidative stress and cell death. Catalases act to neutralise hydrogen peroxide toxicity, and are produced by all aerobic organisms ranging from bacteria to man. Most catalases are mono-functional, haem-containing enzymes, although there are also bifunctional haem-containing peroxidase/catalases (IPR000763 from INTERPRO) that are closely related to plant peroxidases, and non-haem, manganese-containing catalases (IPR007760 from INTERPRO) that are found in bacteria []. Based on a phylogenetic analysis, catalases can be classified into clade 1, 2 and 3. Clade 1 contains small subunit catalases from plants and a subset of bacteria; clade 2 contains large subunit catalases from fungi and a second subset of bacteria; and clade 3 contains small subunit catalases from bacteria, fungi, protists, animals, and plants [, ]. This entry represent the core-forming domain of mono-functional, haem-containing catalases. It does not cover the region that carries an immune-responsive amphipathic octa-peptide that is found in the C-terminal of some catalases (IPR010582 from INTERPRO).; GO: 0004096 catalase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 7CAT_A 3NWL_D 4BLC_D 1TH3_D 1TH4_A 1TGU_B 1TH2_D 3RGS_D 3RE8_D 3RGP_C ....
Probab=100.00 E-value=2.6e-112 Score=887.51 Aligned_cols=382 Identities=49% Similarity=0.818 Sum_probs=339.2
Q ss_pred cccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCcee
Q 042356 18 TTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQT 97 (492)
Q Consensus 18 t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~ 97 (492)
||++|+||.++++|+|+|++||++|||.+|+|+|++|+++++++|.+||||+||+|+|+|++++++++++++|+++||+|
T Consensus 1 t~~~g~~~~~~~~~~~~g~~gp~~~~~~~lvd~l~~~~~~~~~~R~~HAKG~~a~G~F~v~~~~~~~~~a~~F~~~Gk~~ 80 (384)
T PF00199_consen 1 TTSNGAPVANPENSQTVGSRGPLLLQDEQLVDKLEHFDGERPGERAVHAKGHGAKGEFEVTPDLPELTRAGLFAKPGKTY 80 (384)
T ss_dssp B-TTSSBBSSSSSEEEESTTSEBBTTHHHHHHHHHHHTT--TCS-SSS-SEEEEEEEEEESSCGTTT---GGGSSTT-EE
T ss_pred CCCCCcccCCCccceecCCCCCceeccHHHHHHhhccccccCccccccccceEEEEEEEECCcchHhhhcccccCCCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHH
Q 042356 98 PVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFS 177 (492)
Q Consensus 98 pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~ 177 (492)
||++|||+++|+++++|+.+|+|||||||+++||+|||||+|+||||++|+++|++|+++++++|.++++++.++|+|++
T Consensus 81 pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~D~v~~n~PvF~~~d~~~F~~~~~a~~~~p~~~~~~~~~~~~~~~ 160 (384)
T PF00199_consen 81 PVIVRFSNAGGNPGSPDTARDPRGMAIKFFTDEGNWDFVMNNTPVFFARDPEKFLDFLKALKPDPATGLPDPNRLWAFLA 160 (384)
T ss_dssp EEEEEEEESSS-TTS-TTSSSBEEEEEEEEETTEEEEEEEESSSS-S-SSGGGHHHHHHHHSBBTTTTSBCHHHHHHHHH
T ss_pred ceeeeecccCCCCCCCccCCCcceeEeEEecccccceeeeccccceeccCchhccchhhhhcccccccccChHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHHHH
Q 042356 178 HHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYD 257 (492)
Q Consensus 178 ~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL~~ 257 (492)
.|||++|+++++.+++++|.||++++|||+|||+|++++|+.+||||+|+|.+|++.++.+|+.++.+.++|||++||++
T Consensus 161 ~~pe~~~~~~~~~~~~~~p~s~~~~~y~s~~tf~~~~~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~pdyL~~dL~~ 240 (384)
T PF00199_consen 161 AHPEALHQVAWLFSDRPTPASYAHMNYYSIHTFKFTNADGERRYVKYRLVPEQGVKPLTDEEAAKIAGRDPDYLRDDLYE 240 (384)
T ss_dssp HSGGGHHHHHHHHSGGGSBSSGGGS-EEEESEEEEEETTSEEEEEEEEEEETTBTTBE-HHHHHHHHHH-TTHHHHHHHH
T ss_pred cChhhhhhhhhhhccCCCCCCccCCCcEeeeeEEeccccCcccEEEEEecCCCCcccCCHHHhhhcccCCcchhhHHHHH
Confidence 99999999999999899999999999999999999999999999999999999999999999988777789999999999
Q ss_pred HHH-cCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccccC
Q 042356 258 SIA-AGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYS 336 (492)
Q Consensus 258 ~i~-~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps 336 (492)
+|+ +++ ++|+|+|||++++|.++++|+|+|+||+|||+++|+++||+|+|++++++++++||+|+|||||+++||+||
T Consensus 241 rL~~~~~-~~~~l~vQl~~~~d~~~~~~~i~D~T~~Wpe~~~P~~~vg~L~l~~~~~~~~~~~e~l~F~P~~~~~Gi~~s 319 (384)
T PF00199_consen 241 RLAAGGP-VRWDLQVQLATPEDPMPFRFNIEDATKEWPEDRSPLIPVGTLTLNRNPPDFFAECEQLAFNPWHLPPGIEPS 319 (384)
T ss_dssp HHHTTS--EEEEEEEEEEEGGGCTTSSSHTT-TTS--TTTTSEEEEEEEEEEEEE-SSHHHHTTT----TT--BTTEEE-
T ss_pred HHhcCCc-eeEEEEEEecCcccccccCCCcccCCccCCCcCceeeeeeeEeecccccchhhhhhhhhccccccccceecC
Confidence 999 555 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCCC
Q 042356 337 NDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPV 400 (492)
Q Consensus 337 ~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~ 400 (492)
+|||||+|++||++|+++|+|+||+|||||+|+|+++|+||||+|++.|+++.|||+|||+++.
T Consensus 320 ~Dpil~aR~~aY~~s~~~R~~~n~~~lp~n~p~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~ 383 (384)
T PF00199_consen 320 DDPILQARSFAYADSQRRRLGANYQQLPVNEPKCPVHNNQRDGAMRFGNQGSAPNYFPSSFGGP 383 (384)
T ss_dssp S-HHHHHHHHHHHHHHHHHTSTTGGGSGGGS-SSS-BSST---TT-TTTTTTS-SSSSCSSTTS
T ss_pred CCcchhcchhhhhhhhhccCCcccccCCCCCCCCCcCCCCCCCCCccCCCCCCCCcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999763
No 11
>cd08153 srpA_like Catalase-like heme-binding proteins similar to the uncharacterized srpA. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity. This family contains uncharacterized proteins similar to the Synechococcus elongatus PCC 7942 periplasmic protein srpA, of mostly bacterial origin. The plasmid-encoded srpA is regulated by sulfate, but does not seem to function in its uptake or metabolism.
Probab=100.00 E-value=1.3e-74 Score=585.02 Aligned_cols=292 Identities=28% Similarity=0.453 Sum_probs=271.8
Q ss_pred HHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeec
Q 042356 50 KLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTR 129 (492)
Q Consensus 50 ~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~ 129 (492)
.|..-.+.+.+.|++||||+|++|+|+|+++++++++++||+ |++|||++||||++|+++++|..+|+|||||||+++
T Consensus 3 ~~~~~~g~~~~~R~~HaKG~~~~G~f~v~~~~~~~~~~~~f~--~~~~pv~vRfS~~~g~p~~~D~~~d~rG~AiK~~l~ 80 (295)
T cd08153 3 ALEALFGKHPGFRRNHAKGICVSGTFTPSGAAASLSRAPLFS--GGSVPVTGRFSLGGGNPKAPDDAANPRGMALKFRLP 80 (295)
T ss_pred hhhhhcCCCCccccccCceeeEEEEEEECCCcchhhhccccC--CCceEEEEEeccCCCCCCCCCCCCCCCeEEEEEEcC
Confidence 344445567799999999999999999999999999999997 668999999999999999999999999999999988
Q ss_pred CC-ceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccc
Q 042356 130 EG-NFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVN 208 (492)
Q Consensus 130 eG-~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~ 208 (492)
+| +|||||+|+||||++|+++|++|+++++++ .++++++.++++|++.||++.+++.++.+. ++|.||++++|||+|
T Consensus 81 d~~~~D~v~~n~pvF~~~~~~~f~~~~~a~~~~-~~~~~~~~~~~~f~~~~P~~~~~~~~~~~~-~~p~s~~~~~y~s~~ 158 (295)
T cd08153 81 DGEQWRMVMNSFPVFPVRTPEEFLALLKAIAPD-ATGKPDPAKLKAFLAAHPEAAAFLAWIKTA-PPPASFANTTYYGVN 158 (295)
T ss_pred CCCeEeEeEecCcccccCCHHHHHHHHHhhCcC-cCCCCCHHHHHHHHhhCHHHHHHHHHHcCC-CCCCCcccCCcccee
Confidence 88 799999999999999999999999999988 678889999999999999999999987654 799999999999999
Q ss_pred eeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCC
Q 042356 209 TYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLD 288 (492)
Q Consensus 209 tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D 288 (492)
||+|+|++|+.++|||+|+|..|++.|+++|+.. .++|||++||.++|++|+ ++|+|+|||++++|. |+|
T Consensus 159 ~f~f~~~~G~~~~vk~~~~P~~g~~~l~~~~~~~---~~~d~l~~~l~~~l~~g~-~~f~l~vQl~~~~d~------i~D 228 (295)
T cd08153 159 AFYFTNANGKRQPVRWRFVPEDGVKYLSDEEAAK---LGPDFLFDELAQRLAQGP-VRWDLVLQLAEPGDP------TDD 228 (295)
T ss_pred eEEEECCCCCEEEEEEEEEECCCCCCCCHHHhcc---CCcchhHHHHHHHHHhCC-ceEEEEEEEcCCCCc------CCC
Confidence 9999999999999999999999999999887654 468999999999999999 799999999998884 789
Q ss_pred CccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccccCCchhhhhhhhhhHHHHHhhc
Q 042356 289 VTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRL 356 (492)
Q Consensus 289 ~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps~d~ilq~R~~aY~~s~~~R~ 356 (492)
+|++|||+ +|+++||+|+|+++.++.+++||+++|+|||+++||++|+|||||+|+++|++|+++|.
T Consensus 229 ~t~~Wpe~-~p~~~vg~l~l~~~~~~~~~~~e~l~F~P~~~~~gi~~~~Dpi~~~R~~aY~~s~~~R~ 295 (295)
T cd08153 229 PTKPWPAD-RKEVDAGTLTITKVAPDQGGACRDINFDPLVLPDGIEPSDDPLLAARSAAYAVSFSRRQ 295 (295)
T ss_pred CCccCCCC-CceeEEEEEEECCCCccchhhhhheeeCCccCCCCCCCCCChHHhhhhhHHHHHHhhcC
Confidence 99999999 89999999999999666668899999999999999999999999999999999999995
No 12
>cd08150 catalase_like Catalase-like heme-binding proteins and protein domains. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity.
Probab=100.00 E-value=1.3e-69 Score=545.61 Aligned_cols=279 Identities=27% Similarity=0.355 Sum_probs=261.8
Q ss_pred CcccCCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeec--CCceeeec
Q 042356 60 PERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTR--EGNFDLVG 137 (492)
Q Consensus 60 ~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~--eG~~Dlv~ 137 (492)
++|.+||||+||+|+|+|+++++++++++||+ +|++|||++||||++| .+|+.+|+|||||||+++ +++|||||
T Consensus 1 g~R~~Hakg~~a~G~F~v~~~~~~~~~~~~f~-~~~~~pv~~RfS~~~g---~~D~~~~~RG~AiKf~~~~~~~~~D~v~ 76 (283)
T cd08150 1 GLRGQHFQGTCAFGTFEVLADLKERLRVGLFA-EGKVYPAYIRFSNGAG---IDDTKPDIRGFAIKFTGVADAGTLDFVL 76 (283)
T ss_pred CcCcccCCeeeEEEEEEEcCCcchhhhccccc-CCCeeEEEEEeCCCCC---CcccCCCCceEEEEEEecCCCceEeEEE
Confidence 58999999999999999999999999999998 6789999999999987 789999999999999999 55899999
Q ss_pred ccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCC
Q 042356 138 NNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAG 217 (492)
Q Consensus 138 ~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G 217 (492)
||+||||++|++.|+.++++..+.+ +++++++++++|+..||++++++.++++ +.|.||++++|||+|||+|+|++|
T Consensus 77 ~n~pvF~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~p~s~~~~~y~s~~~f~f~~~~g 153 (283)
T cd08150 77 NNTPVFFIRNTSDYEDFVAEFARSA-RGEPPLDFIAWYVEKRPEDLPNLLGARS--QVPDSYAAARYFSQVTFAFINGAG 153 (283)
T ss_pred eCCCcCccCCHHHHHHHHHhccCCc-cCCCChHHHHHHHHhChhHHHHHHHHhC--CCCCCccccceEeeeeEEEeccCC
Confidence 9999999999999999998887665 6789999999999999999999998877 899999999999999999999999
Q ss_pred CEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCC
Q 042356 218 KAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDI 297 (492)
Q Consensus 218 ~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~ 297 (492)
+.++|||+++|.+|.+.|++++.. ..++|||+++|.++|++|+ ++|+|+|||++++|.++ |+|+||+|||+
T Consensus 154 k~~~vr~~~~P~~g~~~l~~~~~~---~~~~d~L~~~l~~rl~~~~-~~~~l~vQl~~~~d~~~----i~D~t~~Wpe~- 224 (283)
T cd08150 154 KYRVVRSKDNPVDGIPSLEDHELE---ARPPDYLREELTERLQRGP-VVYDFRIQLNDDTDATT----IDNPTILWPTE- 224 (283)
T ss_pred EEEEEEEEecccCCCcccchhhhc---CCCcCHHHHHHHHHHHhCC-ceEEEEEEEccccccCC----CCCCCcCCCCC-
Confidence 999999999999999999886643 3578999999999999998 79999999999999754 89999999999
Q ss_pred CCceeeEEEEeCCCCcchhhhcccccccccccCCccccCCc--hhhhhhhhhhHHHHHhhc
Q 042356 298 LPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSND--KLLQTRIFSYADTQRHRL 356 (492)
Q Consensus 298 ~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps~d--~ilq~R~~aY~~s~~~R~ 356 (492)
+|+++||+|+|++++.+ ++||+++|||.++++||++|+| ||||+|+++|.+|+++|+
T Consensus 225 ~p~~~vg~l~i~~~~~~--~~~~~~~f~p~~~~~gi~~~~d~g~i~~~R~~~Y~~S~~~R~ 283 (283)
T cd08150 225 HPVEAVAKITIPPPTFT--AAQEAFAFNPFTPWHGLLETNDLGPILEVRRRVYTSSQGLRH 283 (283)
T ss_pred CCceEEEEEEECCCCCc--HHHHHHhcCCCCCCCccCCCCCchHHHHHHHHHHHHHHHhhC
Confidence 99999999999998776 7899999999999999999999 999999999999999996
No 13
>cd08151 AOS Allene oxide synthase. Allene oxide synthase converts a fatty acid hydroperoxide to an allene oxide, which is an unstable epoxide. In corals, the enzyme is part of a eiconaosid synthesis pathway that is initiated by a lipoxygenase, which generates the fatty acid hydroperoxides in the first step. The structure of allene oxide synthase closely resembles that of catalase, but allene oxide synthase does not have catalase activity.
Probab=100.00 E-value=3.6e-69 Score=552.14 Aligned_cols=290 Identities=22% Similarity=0.314 Sum_probs=254.4
Q ss_pred HHHHHhc---CCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCcee
Q 042356 47 LVEKLAN---FDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFA 123 (492)
Q Consensus 47 ~~~~l~~---~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~A 123 (492)
++.+|+. ......+.|++||||+||+|+|+|+++++ +++++||+ +|++|||++||||++|+ ++|+.+|+||||
T Consensus 10 ~~~~~~~~f~~~~~~~g~R~~HaKG~ga~G~F~v~~d~~-~~~a~~F~-~g~~~pv~~RfS~~~g~--~~D~~~d~RG~A 85 (328)
T cd08151 10 IELNLATMFAAATLKTGRRGTHTIGVGAKGVLTVLAESD-FPEHAFFT-AGKRFPVILRHANIVGG--DDDASLDGRGAA 85 (328)
T ss_pred HHHHHHHHHhhccCCCCcccccCceeeEEEEEEEcCCch-hhhhhhcC-CCCeEEEEEEecCCCCC--ccccccCCCeEE
Confidence 4444443 33445689999999999999999999999 99999997 68899999999999997 899999999999
Q ss_pred EEEeec----CCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHHHHHHHhcCCCCCCCc
Q 042356 124 VKFYTR----EGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDY 199 (492)
Q Consensus 124 iKf~~~----eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~ 199 (492)
|||+++ +|+|||||||+||||++|+++|++|+++..+ .....|...||++... ++.+.+++|.||
T Consensus 86 iKf~~~~~~~~~~~D~v~~n~pvF~~~d~~~F~~~~~a~~p---------~~~~~~~~~~p~~~~~--~~~~~~~~p~s~ 154 (328)
T cd08151 86 LRFLNAGDDDAGPLDLVMNTGESFGFWTAASFADFAGAGLP---------FREKAAKLRGPLARYA--VWASLRRAPDSY 154 (328)
T ss_pred EEEeccCCCCCCceeEEEecCCccccCCHHHHHHHHhcCCC---------cchhhhhhcCHHHHhh--hhhcccCCCCCc
Confidence 999999 6789999999999999999999999998542 2344555578877643 334678999999
Q ss_pred CCCCCcccceeeeEecCCCEEEEEEEEEeC-CCCCCCCHHHHHH------------h--cCCCchhhHHHHHHHHHcCCC
Q 042356 200 RHMEGSGVNTYMLINKAGKAHYVKFHWKPT-CGVKCLLEDEAIK------------V--GGANHSHATQDLYDSIAAGNY 264 (492)
Q Consensus 200 ~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~-~g~~~l~~~ea~~------------~--~~~~~d~l~~dL~~~i~~g~~ 264 (492)
++++|||+|||+|+|++|+.+||||+|+|. ++++.++.+|+.+ . ...++|||++||+++|++|+
T Consensus 155 ~~~~y~s~~~f~f~~~~G~~~~vK~~~~P~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~L~~dl~~rl~~g~- 233 (328)
T cd08151 155 TDLHYYSQICYEFVALDGKSRYARFRLLPPDADTEWDLGEDVLETIFQRPRLYLPRLPGDTRPKDYLRNEFRQRLQSPG- 233 (328)
T ss_pred ccccceeEeeEEEECCCCCEEEEEEEEEECCCCccccchhhhhhcccccccccchhhcccCCCccHHHHHHHHHHHhCC-
Confidence 999999999999999999999999999995 5778888887542 1 22478999999999999998
Q ss_pred ceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCC--ccccCCch---
Q 042356 265 PEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVP--GIYYSNDK--- 339 (492)
Q Consensus 265 ~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~--Gi~ps~d~--- 339 (492)
++|+|+|||++++|.. +++|+|+||+|||+++|+++||+|+|++++++ ++||+++|||||+++ ||++|.||
T Consensus 234 ~~~~l~iQl~~~~d~~--~~~i~D~T~~Wpe~~~P~i~vg~l~l~~~~~~--~~~e~l~F~P~~~~~~~gi~~~~~~~d~ 309 (328)
T cd08151 234 VRYRLQIQLREVSDDA--TAVALDCCRPWDEDEHPWLDLAVVRLGAPLPN--DELEKLAFNPGNTPESLGLPLAYCADDY 309 (328)
T ss_pred ceEEEEEEEechhhcC--CCCCCCCCccCCcccCceEEEEEEEECCCCCh--hhhHhhcccccccCCCCCccCCCChHHh
Confidence 7999999999998854 46799999999999999999999999999874 689999999999999 99999998
Q ss_pred --hhhhhhhhhHHHHHhhc
Q 042356 340 --LLQTRIFSYADTQRHRL 356 (492)
Q Consensus 340 --ilq~R~~aY~~s~~~R~ 356 (492)
|+++|+.+|+.|+++|.
T Consensus 310 gsi~~~R~~vY~~s~~~R~ 328 (328)
T cd08151 310 ASLGHLRSLVYEISQRLRK 328 (328)
T ss_pred hhHHHHHHHHHHHHHhhcC
Confidence 99999999999999983
No 14
>cd08152 y4iL_like Catalase-like heme-binding proteins similar to the uncharacterized y4iL. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity. This family contains uncharacterized proteins similar to Rhizobium sp. NGR234 y4iL, of mostly bacterial origin.
Probab=100.00 E-value=2e-66 Score=527.42 Aligned_cols=280 Identities=20% Similarity=0.220 Sum_probs=249.1
Q ss_pred CCcccCCCCce-eEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCC------
Q 042356 59 IPERVVHARGA-SAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREG------ 131 (492)
Q Consensus 59 ~~~R~~HAKG~-ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG------ 131 (492)
.+.|++||||+ |++|+|+|+++++++++++||+. |++|||+|||||++|+ ..+|..+|+|||||||++++|
T Consensus 2 ~~~R~~HaKg~G~v~G~F~v~~~~~~~~~~~~F~~-~~~~pv~vRfS~~~~~-~~~D~~~~~RG~AiK~~~~~G~~l~~~ 79 (305)
T cd08152 2 HALRDAHAKSHGCLKAEFTVLDDLPPELAQGLFAE-PGTYPAVIRFSNAPGD-ILDDSVPDPRGMAIKVLGVPGEKLLPE 79 (305)
T ss_pred CccccccCcccccceEEEEECCCchHHHhhhhcCC-CCeEEEEEEecCCCCC-CCCcccCCCCeEEEEEEcCcccccccc
Confidence 47899999998 78999999999999999999985 7899999999999998 789999999999999999866
Q ss_pred ----ceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHh-CchhHHHHHHHhcC-------CCCCCCc
Q 042356 132 ----NFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSH-HPESLHMFSFLFDD-------VGVPRDY 199 (492)
Q Consensus 132 ----~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~-~Pes~~~~~~l~s~-------~~~p~s~ 199 (492)
+|||||||+||||++|+++|++|++++++. +++ +.+.+.|+.. +|+...++.++... ...|.||
T Consensus 80 ~~~~~~D~v~~n~pvF~~~d~~~f~~~~~a~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~ 155 (305)
T cd08152 80 EDATTQDFVLVNHPVFFARDAKDYLALLKLLART--TSL--PDGAKAALSAPLRGALRVLEAAGGESPTLKLGGHPPAHP 155 (305)
T ss_pred cCCcccceeeecCceeecCCHHHHHHHHHHHHhh--cCC--chHHHHHHHHHHHHHHHHHHhhcccccccccccCCCCCc
Confidence 799999999999999999999999999854 444 4567778876 77777666655331 3568999
Q ss_pred CCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCC-CCHHHHHHhcCCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCc
Q 042356 200 RHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKC-LLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDH 278 (492)
Q Consensus 200 ~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~-l~~~ea~~~~~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d 278 (492)
++++|||+|+|+|+|. +|||+|+|.+|... ++.+++. .+.++|||+++|.++|++|+ ++|+|+||+++++|
T Consensus 156 ~~~~y~s~~~fr~g~~-----~vk~~~~P~~~~~~~l~~~~~~--~~~~~d~L~~~L~~~l~~g~-~~f~l~vQl~~~~d 227 (305)
T cd08152 156 LGETYWSQAPYRFGDY-----VAKYSVVPASPALPALTGKELD--LTDDPDALREALADFLAEND-AEFEFRIQLCTDLE 227 (305)
T ss_pred cccceecccceeEcce-----eEEEEEEECCCccccCchhhhh--cCCCccHHHHHHHHHHHhCC-ceEEEEEEecCchh
Confidence 9999999999999873 99999999998765 6666542 24688999999999999999 79999999999999
Q ss_pred CCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCc----chhhhcccccccccccCCccccCCchhhhhhhhhhHHHHHh
Q 042356 279 EDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNID----NFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRH 354 (492)
Q Consensus 279 ~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~----n~~~~~e~laF~P~~~~~Gi~ps~d~ilq~R~~aY~~s~~~ 354 (492)
.++ |+|+||+|||+++|+++||+|+|+++.. +..+.||+|+|||||+++||+|| |+|+++|+.+|+.|+++
T Consensus 228 ~~p----i~D~tv~W~e~~~p~i~vg~l~i~~~~~~~~~~~~~~~~~l~F~P~~~~~g~~p~-g~i~r~R~~vY~~S~~~ 302 (305)
T cd08152 228 KMP----IEDASVEWPEALSPFVPVATITIPPQDFDSPARQRAFDDNLSFNPWHGLAEHRPL-GSINRARKAVYEASSAF 302 (305)
T ss_pred hCC----CCcCCccCCCccCCCeEEEEEEECCCCccCHHHHhhhhhccccCccccccccCcC-hHHHHHHHHHHHHHHHH
Confidence 876 8899999999999999999999999976 55678999999999999999999 99999999999999999
Q ss_pred hcC
Q 042356 355 RLG 357 (492)
Q Consensus 355 R~g 357 (492)
|+.
T Consensus 303 R~~ 305 (305)
T cd08152 303 RHE 305 (305)
T ss_pred hcC
Confidence 974
No 15
>PF06628 Catalase-rel: Catalase-related immune-responsive; InterPro: IPR010582 Catalases (1.11.1.6 from EC) are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects []. Hydrogen peroxide is produced as a consequence of oxidative cellular metabolism and can be converted to the highly reactive hydroxyl radical via transition metals, this radical being able to damage a wide variety of molecules within a cell, leading to oxidative stress and cell death. Catalases act to neutralise hydrogen peroxide toxicity, and are produced by all aerobic organisms ranging from bacteria to man. Most catalases are mono-functional, haem-containing enzymes, although there are also bifunctional haem-containing peroxidase/catalases (IPR000763 from INTERPRO) that are closely related to plant peroxidases, and non-haem, manganese-containing catalases (IPR007760 from INTERPRO) that are found in bacteria []. This entry represents a small conserved region within catalase enzymes that carries the immune-responsive amphipathic octa-peptide that is recognised by T cells [].; PDB: 2CAH_A 1NM0_A 1H7K_A 1E93_A 1H6N_A 3HB6_A 2CAG_A 1M85_A 1MQF_A 1A4E_C ....
Probab=99.80 E-value=3.4e-20 Score=147.73 Aligned_cols=66 Identities=27% Similarity=0.454 Sum_probs=60.7
Q ss_pred eccCCCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCCHH-HHHHHHHHHHhhCHHHHHHHHHHhC
Q 042356 420 CIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHE-IRHIWISYWSQACKSLGQKLASRLN 487 (492)
Q Consensus 420 ~~~~~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~~~-I~~r~l~~f~~vD~dlg~rVa~~l~ 487 (492)
+.+.++|||+|||+||++|+++||++||+||+++|+ .|+++ |++|+|.+|++||++||++|+++||
T Consensus 2 ~~~~~~ddf~Qa~~ly~~l~~~er~~lv~nia~~l~--~v~~~~i~~r~l~~f~~vd~~lg~~v~~~lg 68 (68)
T PF06628_consen 2 YRSEKDDDFSQARDLYRVLSDEERERLVENIAGHLS--GVSDEEIQERVLAYFYKVDPDLGQRVAEALG 68 (68)
T ss_dssp HGHGGGCSSHHHHHHHHHSSHHHHHHHHHHHHHHHT--TSSHHHHHHHHHHHHHHH-HHHHHHHHHHHT
T ss_pred CCCCCCcchhhHHHHHHHCCHHHHHHHHHHHHHHHc--cCChhhHHHHHHHHHHHhCHHHHHHHHHHcC
Confidence 445567999999999999999999999999999999 78877 9999999999999999999999986
No 16
>TIGR03784 marine_sortase sortase, marine proteobacterial type. Members of this protein family are sortase enzymes, cysteine transpeptidases involved in protein sorting activities. Members of this family tend to be found in proteobacteria, rather than in Gram-positive bacteria where sortases attach proteins to the Gram-positive cell wall or participate in pilin cross-linking. Many species with this sortase appear to contain a signal target sequence, a protein with a Vault protein inter-alpha-trypsin domain (pfam08487) and a von Willebrand factor type A domain (pfam00092), encoded by an adjacent gene. These sortases are designated subfamily 6 according to Comfort and Clubb (2004).
Probab=37.37 E-value=26 Score=33.04 Aligned_cols=45 Identities=24% Similarity=0.280 Sum_probs=31.3
Q ss_pred CccccCCCCCCceeeEEEEeCCCCcch----hhhcccccccccccCCcccc
Q 042356 289 VTKTWPEDILPLQPVGRLVLNKNIDNF----FAENEQLAFCPAIVVPGIYY 335 (492)
Q Consensus 289 ~Tk~Wpe~~~P~~~vG~l~l~~~~~n~----~~~~e~laF~P~~~~~Gi~p 335 (492)
++|+||-.+. .+||+|+|++...+. -...+.|+|.|+|....-.|
T Consensus 39 ~~kpw~wadt--~pva~L~IP~lg~~~~V~~G~s~~~L~~G~G~~~~t~~P 87 (174)
T TIGR03784 39 EHKPWPWADT--YPVAKLSAPRLGASLYVLAGASGRNLAFGPGHMLATAQP 87 (174)
T ss_pred CCCCCccccC--ceeEEEEEccCCCceeEEecCCHHHHhheeEEecCCCCC
Confidence 5689998775 489999999864331 12346788998887655444
No 17
>PF14098 SSPI: Small, acid-soluble spore protein I
Probab=34.64 E-value=33 Score=27.20 Aligned_cols=22 Identities=5% Similarity=0.143 Sum_probs=18.9
Q ss_pred hhccCCCHHHHHHHHHHHHHhc
Q 042356 433 ERYRSWAPDRQERFICRWVDAL 454 (492)
Q Consensus 433 ~fy~~l~~~ek~~Li~Nia~~L 454 (492)
..|+.+++.||+.|++.|..+|
T Consensus 44 ~~W~~~~~~ek~~m~~~l~~~l 65 (65)
T PF14098_consen 44 VIWKNSDESEKQEMVNTLEQGL 65 (65)
T ss_pred HHHHhCCHHHHHHHHHHHHhcC
Confidence 4688999999999999987764
No 18
>TIGR03092 SASP_sspI small, acid-soluble spore protein I. This protein family is restricted to a subset of endospore-forming bacteria such as Bacillus subtilis, all of which are in the Firmicutes (low-GC Gram-positive) lineage. It is a minor SASP (small, acid-soluble spore protein) designated SspI. The gene in Bacillus subtilis previously was designated ysfA.
Probab=34.63 E-value=34 Score=27.04 Aligned_cols=23 Identities=0% Similarity=0.112 Sum_probs=19.9
Q ss_pred hhccCCCHHHHHHHHHHHHHhcC
Q 042356 433 ERYRSWAPDRQERFICRWVDALS 455 (492)
Q Consensus 433 ~fy~~l~~~ek~~Li~Nia~~L~ 455 (492)
.+|+.+++.||+.|++.|..+|+
T Consensus 43 ~~W~~~~~~ek~~m~~~l~~~l~ 65 (65)
T TIGR03092 43 AIWKHANEQEKDEMLETLEQGVK 65 (65)
T ss_pred HHHHhcCHHHHHHHHHHHHHhcC
Confidence 47889999999999999988764
No 19
>PHA03155 hypothetical protein; Provisional
Probab=29.47 E-value=46 Score=29.23 Aligned_cols=40 Identities=15% Similarity=0.239 Sum_probs=33.6
Q ss_pred cCCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCH
Q 042356 436 RSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACK 476 (492)
Q Consensus 436 ~~l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~ 476 (492)
+.|++.||+-+|....+.|+. ++.+.|..|+...+..+.-
T Consensus 40 ~~LT~~qKea~I~s~v~~Lt~-~A~~KIe~kVrk~~~~~vT 79 (115)
T PHA03155 40 ELLTPAQKDAIINSLVNKLTK-KAEEKIRERVLKDLLPLVS 79 (115)
T ss_pred cccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhcc
Confidence 679999999999999999995 5567899999887776643
No 20
>PF10410 DnaB_bind: DnaB-helicase binding domain of primase; InterPro: IPR019475 This entry represents the C-terminal region three-helical domain of DNA primase []. Primases synthesise short RNA strands on single-stranded DNA templates, thereby generating the hybrid duplexes required for the initiation of synthesis by DNA polymerases. Primases are recruited to single-stranded DNA by helicases - this domain binds DnaB-helicase []. It is associated with the Toprim domain IPR006171 from INTERPRO, which is the central catalytic core. ; GO: 0016779 nucleotidyltransferase activity; PDB: 1EQN_E 1DD9_A 3B39_B 1DDE_A.
Probab=28.51 E-value=1.5e+02 Score=21.95 Aligned_cols=42 Identities=14% Similarity=0.216 Sum_probs=27.6
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHhCCCC
Q 042356 437 SWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRP 490 (492)
Q Consensus 437 ~l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l~~~~ 490 (492)
.=++++|.++++.++.-++ .++..|.. ..|-++|++.+|++.
T Consensus 15 l~~~egk~~~~~~~~~~i~--~i~~~i~r----------~~y~~~la~~~~i~~ 56 (59)
T PF10410_consen 15 LDTPEGKAEAVREAAPLIA--QIPDPIER----------ELYIRELAERLGISE 56 (59)
T ss_dssp TTSHHHHHHHHHHHHHHHT--T--SHHHH----------HHHHHHHHHHCT-SS
T ss_pred CCCHHHHHHHHHHHHHHHH--HCCCHHHH----------HHHHHHHHHHhCcCc
Confidence 3468899999999999999 67666544 234555666666543
No 21
>PF13945 NST1: Salt tolerance down-regulator
Probab=25.73 E-value=37 Score=32.57 Aligned_cols=17 Identities=12% Similarity=0.257 Sum_probs=15.3
Q ss_pred chhccCCCHHHHHHHHH
Q 042356 432 GERYRSWAPDRQERFIC 448 (492)
Q Consensus 432 r~fy~~l~~~ek~~Li~ 448 (492)
+.||.+|+++||..||.
T Consensus 108 keFW~SL~eeERr~LVk 124 (190)
T PF13945_consen 108 KEFWESLSEEERRSLVK 124 (190)
T ss_pred HHHHHccCHHHHHHHHH
Confidence 57999999999999984
No 22
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=25.33 E-value=46 Score=27.84 Aligned_cols=33 Identities=12% Similarity=0.274 Sum_probs=23.8
Q ss_pred eeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHh
Q 042356 209 TYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKV 243 (492)
Q Consensus 209 tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~ 243 (492)
+|||.+..| +.+||++.|..|+..|-.+-+.++
T Consensus 2 ~FK~~~~~G--rvhRf~~~~s~~~~~L~~~I~~Rl 34 (86)
T cd06409 2 AFKFKDPKG--RVHRFRLRPSESLEELRTLISQRL 34 (86)
T ss_pred cEEeeCCCC--CEEEEEecCCCCHHHHHHHHHHHh
Confidence 689988777 679999999888765544434444
No 23
>PRK02955 small acid-soluble spore protein SspI; Provisional
Probab=24.67 E-value=65 Score=25.74 Aligned_cols=23 Identities=4% Similarity=0.151 Sum_probs=19.7
Q ss_pred hhccCCCHHHHHHHHHHHHHhcC
Q 042356 433 ERYRSWAPDRQERFICRWVDALS 455 (492)
Q Consensus 433 ~fy~~l~~~ek~~Li~Nia~~L~ 455 (492)
..|+.+++.||+.|++.|..+|+
T Consensus 46 ~~W~~~~~~ek~~m~~~l~~~l~ 68 (68)
T PRK02955 46 VIWKNADENEKDEMLETLEQGLK 68 (68)
T ss_pred HHHHhcCHHHHHHHHHHHHHhcC
Confidence 47889999999999999987763
No 24
>PF13511 DUF4124: Domain of unknown function (DUF4124)
Probab=23.89 E-value=54 Score=24.70 Aligned_cols=20 Identities=20% Similarity=0.524 Sum_probs=14.1
Q ss_pred cceeeeEecCCCEEEEEEEEEeC
Q 042356 207 VNTYMLINKAGKAHYVKFHWKPT 229 (492)
Q Consensus 207 ~~tf~~~n~~G~~~~vK~~~~P~ 229 (492)
..-|+|+|++|..+ |+=.|.
T Consensus 13 a~vYk~~D~~G~v~---ysd~P~ 32 (60)
T PF13511_consen 13 AEVYKWVDENGVVH---YSDTPP 32 (60)
T ss_pred ccEEEEECCCCCEE---ECccCC
Confidence 46799999999744 444454
Done!