Query 042356
Match_columns 492
No_of_seqs 238 out of 1451
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 09:03:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042356.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042356hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1m7s_A Catalase; beta barrel, 100.0 3E-146 9E-151 1156.2 46.4 470 15-489 2-471 (484)
2 2isa_A Catalase; peroxidase, h 100.0 3E-146 1E-150 1157.2 46.1 472 17-490 5-478 (483)
3 2j2m_A Catalase; functional cl 100.0 4E-146 1E-150 1156.6 46.6 474 14-489 5-481 (491)
4 3ttv_A Catalase HPII; heme ori 100.0 3E-146 9E-151 1198.7 45.0 475 13-489 76-565 (753)
5 1si8_A Catalase; N-terminal AR 100.0 2E-146 6E-151 1157.6 41.6 473 15-490 4-478 (484)
6 1gwe_A Catalase; oxidoreductas 100.0 2E-145 5E-150 1153.5 47.3 475 13-490 9-488 (503)
7 1dgf_A Catalase; heme, NADPH, 100.0 7E-146 2E-150 1156.2 44.3 474 13-488 19-495 (497)
8 1qwl_A KATA catalase; beta bar 100.0 6E-146 2E-150 1156.8 44.0 474 13-488 4-485 (505)
9 3ej6_A Catalase-3; heme, hydro 100.0 9E-145 3E-149 1180.9 47.5 474 13-489 20-508 (688)
10 1a4e_A Catalase A; oxidoreduct 100.0 5E-145 2E-149 1147.4 41.9 471 14-487 5-488 (488)
11 2iuf_A Catalase; oxidoreductas 100.0 4E-143 1E-147 1171.3 46.2 472 14-488 13-499 (688)
12 2xq1_A Peroxisomal catalase; o 100.0 3E-143 1E-147 1137.5 42.9 470 15-488 7-498 (509)
13 1sy7_A Catalase 1; heme oxidat 100.0 3E-136 1E-140 1129.8 42.6 471 16-488 19-502 (715)
14 3e4w_A Putative uncharacterize 100.0 1.5E-97 5E-102 753.5 29.1 301 42-360 12-313 (320)
15 1u5u_A Allene oxide synthase-l 100.0 3.4E-84 1.2E-88 667.7 18.2 301 38-366 39-371 (374)
16 3dy5_A Allene oxide synthase-l 100.0 4E-75 1.4E-79 664.8 15.7 312 38-371 39-375 (1066)
17 3eyi_A Z-DNA-binding protein 1 31.0 25 0.00086 27.1 2.2 37 453-489 1-37 (72)
18 1l6x_B Minimized B-domain of p 21.2 43 0.0015 22.1 1.6 24 429-452 4-32 (34)
No 1
>1m7s_A Catalase; beta barrel, alpha helical domain, oxidoreductase; HET: HEM; 1.80A {Pseudomonas syringae} SCOP: e.5.1.1
Probab=100.00 E-value=2.7e-146 Score=1156.20 Aligned_cols=470 Identities=47% Similarity=0.834 Sum_probs=456.5
Q ss_pred CcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCC
Q 042356 15 PFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPG 94 (492)
Q Consensus 15 ~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~G 94 (492)
+++||++|+||.++++|+|+|++||+||||.+|+|||+||+||||++|++||||+||+|+|+++++++++|+|+|| ++|
T Consensus 2 ~~~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F-~~G 80 (484)
T 1m7s_A 2 DTLTRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTASADISDLSKATVF-KSG 80 (484)
T ss_dssp CCCBCTTSCBCSCSSSCCEESTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGG-STT
T ss_pred CcccCCCCCccCCCccceecCCCCCcccccHHHHHHHHHhcCCCCCccccCCCcceEEEEEEECCchHHhhhcccc-CCC
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999 699
Q ss_pred ceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHH
Q 042356 95 VQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVD 174 (492)
Q Consensus 95 k~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~ 174 (492)
|+|||++|||+++|+++++|+.||+|||||||||+||+|||||||+||||++|+++|++|+|++|++|.|++++++++|+
T Consensus 81 k~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~~d 160 (484)
T 1m7s_A 81 EKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFD 160 (484)
T ss_dssp CEEEEEEEEECSSSCTTCCTTSCSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGGHHHHHHHHSCCTTTSSCCHHHHHH
T ss_pred CeeEEEEEeccCCCCCCCCcccCCcCceEEEEecCCCcceeeecCCCccccCCHHHHHHHHHHhCcCCccCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHH
Q 042356 175 FFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQD 254 (492)
Q Consensus 175 f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~d 254 (492)
|++.+||++|+++|++|++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++|||++|
T Consensus 161 f~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VK~h~~P~~Gv~~L~~~ea~~~~g~dpd~l~~D 240 (484)
T 1m7s_A 161 FFSHVPEATRTLTLLYSNEGTPAGYRFMDGNGVHAYKLVNAKGEVHYVKFHWKSLQGIKNLDPKEVAQVQSKDYSHLTND 240 (484)
T ss_dssp HHHTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTSCEEEEEEEEEETTCCCBCCHHHHHHHHHHCSCHHHHH
T ss_pred HHHhChhHhhHHHHhhccCCCCCccccccccccCceeeEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCChhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888899999999
Q ss_pred HHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccc
Q 042356 255 LYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIY 334 (492)
Q Consensus 255 L~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ 334 (492)
|+++|++|++|+|+|+||||+++|+.+++|||+|+||+||| +|+++||+|+|++|++|+|++|||++|+|||++|||+
T Consensus 241 L~~aI~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe--~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~ 318 (484)
T 1m7s_A 241 LVGAIKKGDFPKWDLYVQVLKPEELAKFDFDPLDATKIWPD--VPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIE 318 (484)
T ss_dssp HHHHHHTTCCCEEEEEEEEECGGGGGGSSSCTTCTTCCCSS--SCEEEEEEEEEEEECSCHHHHTTTCCCCTTCCCTTEE
T ss_pred HHHHHHcCCCceEEEEEEeecHHHhhcCCCCccCCCCcCCC--CCCEEeEEEEECCCcccchhhhhhhcccccccCCccC
Confidence 99999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred cCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCCCccCCCCCCCCcccc
Q 042356 335 YSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICG 414 (492)
Q Consensus 335 ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~~~~~~~~~~~~~~~ 414 (492)
||+|||||+|++||++||++|+|+||+|||||||+||++||||||+|++.++++.|||+|||+.+....+.+.+++..++
T Consensus 319 ~S~DplLq~R~fsY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~~ 398 (484)
T 1m7s_A 319 PSEDRLLQGRVFSYADTQMYRLGANGLSLPVNQPKVAVNNGNQDGALNTGHTTSGVNYEPSRLEPRPADDKARYSELPLS 398 (484)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGCCSSCCCSSCCCCTTCCCCCCCSCCSSSCSSSCCCCCGGGCCCCCBCC
T ss_pred CCCChHHHHHHHHHHHHHHHhhcCCcccCCCCCCCCcccCccccCcccccCCCCCCCcCCCcCCCCCCCCCCCCCCeecc
Confidence 99999999999999999999999999999999999999999999999999779999999999987555556777777889
Q ss_pred cceeeeccCCCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHhCCC
Q 042356 415 GRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVR 489 (492)
Q Consensus 415 G~~~~~~~~~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l~~~ 489 (492)
|.+.++.+.++|||+|||+||++|++.||++||+||+++|+ +|+++||+|++++|++||++||++|+++|+++
T Consensus 399 g~~~~~~~~~~d~~~q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~~~~v~~~~~~~ 471 (484)
T 1m7s_A 399 GTTQQAKITREQNFKQAGDLYRSYSAKEKTDLVQKFGESLA--DTLTESKNIMLSYLYKEDPNYGTRVAEVAKGD 471 (484)
T ss_dssp SBEECCCCSCCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred cceeeecCCCcchhhhHHHHHHhCCHHHHHHHHHHHHHHHh--ccCHHHHHHHHHHHHHhCHHHHHHHHHHhCCC
Confidence 99988887778999999999999999999999999999999 68999999999999999999999999999864
No 2
>2isa_A Catalase; peroxidase, heme, oxidoreductase, iron, hydrogen peroxide; HET: OMT HEM; 1.97A {Vibrio salmonicida} PDB: 1m85_A* 1mqf_A* 1nm0_A* 2cag_A* 2cah_A* 1e93_A* 1h7k_A* 1h6n_A* 3hb6_A*
Probab=100.00 E-value=2.8e-146 Score=1157.22 Aligned_cols=472 Identities=40% Similarity=0.676 Sum_probs=458.1
Q ss_pred ccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCce
Q 042356 17 FTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQ 96 (492)
Q Consensus 17 ~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~ 96 (492)
+||++|+||.++++|+|+|++||+||||.+|+|||+||+||||++|++||||+||+|+|+++++++++|+|+||+++||+
T Consensus 5 ~tt~~g~pv~~~~~s~t~G~~Gp~ll~d~~l~ekl~~f~~eripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~ 84 (483)
T 2isa_A 5 LTTAAGCPVAHNQNVQTAGKRGPQLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITKYTKAKIFSDIGKK 84 (483)
T ss_dssp CBCTTSCBCCCSSSCCEESTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCE
T ss_pred cccCCCCccCCCccceecCCCCCcccccHHHHHHHHHhcCCCCCcccccCCccEEEEEEEECCCchHhhhchhccCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHH
Q 042356 97 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFF 176 (492)
Q Consensus 97 ~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~ 176 (492)
|||++||||++|+++++|+.||+|||||||||+||+|||||||+||||++|+++|++|+|++|++|.|++++++++|+|+
T Consensus 85 tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~~df~ 164 (483)
T 2isa_A 85 TDMFARFSTVAGERGAADAERDIRGFSLKFYTEEGNWDLAGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSAKNNWDFW 164 (483)
T ss_dssp EEEEEEEECSSCCTTSCSSCSSCCEEEEEEEETTEEEEEEEESSSCCSCSSGGGHHHHHHHHSBCTTTCSBCHHHHHHHH
T ss_pred eeEEEEeecCCCCCCCCCcCCCcCceEEEEecCCCccceeeeCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHHH
Q 042356 177 SHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLY 256 (492)
Q Consensus 177 ~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL~ 256 (492)
+.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++||+++||+
T Consensus 165 s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VK~h~~P~~Gv~~L~~~ea~~~~g~d~d~~~~dL~ 244 (483)
T 2isa_A 165 TSLPEALHQVTIVMSDRGIPATYRHMHGFGSHTFSFINSDNERYWVKFHFVSQQGIKNLSDAEAGELVGNDRESHQRDLL 244 (483)
T ss_dssp HTCGGGHHHHHHHHSGGGSBSSGGGSCEECCSCEEEECTTCCEEEEEEEEEESSCCCBCCHHHHHHHHHHCTTHHHHHHH
T ss_pred HhChhHhhHHHHhhccCCCCCCcccccccccCceeEEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCChhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred HHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccccC
Q 042356 257 DSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYS 336 (492)
Q Consensus 257 ~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps 336 (492)
++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+|++|++|+|++|||++|+|||+||||+||
T Consensus 245 ~aI~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~pS 324 (483)
T 2isa_A 245 DSIDNQDFPKWTLKVQIMPEADAATVPYNPFDLTKVWPHKDYPLIEVGEFELNRNPQNYFAEVEQAAFNPANVVPGISFS 324 (483)
T ss_dssp HHHHTTCCCEEEEEEEEEEGGGGGTSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEECC
T ss_pred HHHHcCCCceEEEEEEeeChhhhhcCCCCCCCCCccCCcccCCceEEEEEEecCCCccchhhhhhhhcCcccCCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeec-CCCCCCcccCCCCCCCccCCCCCCCCccccc
Q 042356 337 NDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFM-HRDEEIDYFPSRYDPVRHAEMHPTPPEICGG 415 (492)
Q Consensus 337 ~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~-~~~~~~nY~pns~~~~~~~~~~~~~~~~~~G 415 (492)
+|||||+|++||++||++|+|+||+|||||||+||++||||||+|++. ++++.|||+|||+.++...+.+..++..++|
T Consensus 325 ~D~lLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~~g 404 (483)
T 2isa_A 325 PDKMLQGRLFAYGDAQRYRLGVNHQHIPVNAPRCPVHSYHRDGAMRVDGNFGSTLGYEPNDQGQWAEQPDFSEPPLNLDG 404 (483)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCTTGGGSGGGSCSSCCCCCCCCCSSCCSCTTTTCCCCSSCTTCTTBCCGGGCCCCBCCCS
T ss_pred CChHHHHHHHHHHHHHHHhhcCcccccccCCCCccccCcccccccccccCCCCcccCCCCcCCCccCCCCCCCCcccccc
Confidence 999999999999999999999999999999999999999999999997 6699999999999875555566677777899
Q ss_pred ceeeeccC-CCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHhCCCC
Q 042356 416 RREKCIIP-KENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRP 490 (492)
Q Consensus 416 ~~~~~~~~-~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l~~~~ 490 (492)
.+.++.+. ++|||+|||+||++|++.||++||+||+++|+ +|+++||+|++++|++||++||++|+++|+++.
T Consensus 405 ~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~l~~~~~~~l~--~~~~~i~~~~~~~~~~~d~~~~~~v~~~~~~~~ 478 (483)
T 2isa_A 405 AAAHWDHREDEDYFSQPGDLFGLMTAEKQAILFDNTARNLN--GVPKEIQLRHVTHCYKADPAYGEGIGKLLGFDI 478 (483)
T ss_dssp CEECCCGGGCCCCSHHHHHHHHHSCHHHHHHHHHHHHHHTT--TSCHHHHHHHHHHHHHHCHHHHHHHHHHHTCCG
T ss_pred ceEeecccCCcchhhhHHHHHHcCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHHHHHHHHhCCch
Confidence 99888764 78999999999999999999999999999999 689999999999999999999999999998653
No 3
>2j2m_A Catalase; functional class, oxidoreductase; HET: HEM; 2.4A {Exiguobacterium oxidotolerans}
Probab=100.00 E-value=3.9e-146 Score=1156.64 Aligned_cols=474 Identities=49% Similarity=0.860 Sum_probs=456.9
Q ss_pred CCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCC
Q 042356 14 APFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAP 93 (492)
Q Consensus 14 ~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~ 93 (492)
.+++||++|+||.++++|+|+|++||+||||.+|+|||+||+||||++|++||||+||+|+|+++++++++|+|+||+++
T Consensus 5 ~~~~tt~~G~pv~~~~~s~t~G~~Gp~ll~d~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~ 84 (491)
T 2j2m_A 5 EKKLTTNQGVPIGDNQNSRTAGRRGPTLLEDYQLIEKIAHFDRERVPERVVHARGFGAHGVFKVKNSMKKYTKAAFLQEE 84 (491)
T ss_dssp -CBCBCTTCCBCSCSSCCEESSTTSCBBTTCHHHHHHHHHHTTCCCBCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSST
T ss_pred CCccccCCCCccCCCccceecCCCCCcccccHHHHHHHHhhcCCCCCCccccCCcceeEEEEEECCcchHhhhchhccCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHH
Q 042356 94 GVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIV 173 (492)
Q Consensus 94 Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~ 173 (492)
||+|||++||||++|+++++|+.||+|||||||||+||+|||||||+||||++|+++|++|+|++|++|.|++++++++|
T Consensus 85 Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~w 164 (491)
T 2j2m_A 85 GTEVPVFARFSTVIHGTHSPETLRDPRGFSVKFYTEEGNWDFVGNNLPVFFIRDAMKFPDMVHSLKPDPRTNIQDPDRYW 164 (491)
T ss_dssp TCEEEEEEEEECSSSCTTCCTTSCSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGGHHHHHHHHSCCTTTCSCCHHHHH
T ss_pred CccceeEeeccCCCCCCCCCcccCCcCceEEEEecCCcceeeeecCCCccccCCHHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHH
Q 042356 174 DFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQ 253 (492)
Q Consensus 174 ~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~ 253 (492)
+|++.+||++|+++|+++++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++|||++
T Consensus 165 df~s~~Pes~h~~~~l~sdrg~P~syr~m~g~g~htf~~vn~~G~~~~VK~h~~P~~Gv~~L~~~ea~~~~g~d~d~~~~ 244 (491)
T 2j2m_A 165 DFMTLRPESTNMLMHIFTDEGIPASYRKMRGSSVHSFKWVNAHGNTVYIKLRWVPKEGVHNLSADEATEVQGKDFNHASN 244 (491)
T ss_dssp HHHHHSGGGHHHHHHHTSGGGSBSCGGGCCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHHHCTTHHHH
T ss_pred HHHHhCchHHhHHHHHhccCCCCCChhhccCccccceeeEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCChhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred HHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCcc
Q 042356 254 DLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGI 333 (492)
Q Consensus 254 dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi 333 (492)
||+++|++|++|+|+|+||||+++|+..++|||+|+||+|||+++|+++||+|+|++|++|+|++|||++|+|||+||||
T Consensus 245 DL~~aI~~G~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI 324 (491)
T 2j2m_A 245 DTFQAIENGDFPEWDLFVQVLDPADVENFDFDPLDATKDWFEDVIPFQHVGTMTLNKNVDNYFAETESVGFNPGVLVPGM 324 (491)
T ss_dssp HHHHHHHTTCCCEEEEEEEEECGGGGGGSSSCTTCTTCCCCTTTSCCEEEEEEEEEEECSCTCCCCCTCCCCTTCCCTTE
T ss_pred HHHHHHHcCCCCeEEEEEEeechhhhhcCCCCCCCCCccCCcccCCcEEEEEEEecCCCcchhhhhhhhhcCcccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCC-CccCCCCCCCCcc
Q 042356 334 YYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDP-VRHAEMHPTPPEI 412 (492)
Q Consensus 334 ~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~-~~~~~~~~~~~~~ 412 (492)
+||+|||||+|++||++||++|+|+||+|||||||+||++||||||+|++.++++.|||+|||+.+ +...+.+..++..
T Consensus 325 ~pS~D~lLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~ 404 (491)
T 2j2m_A 325 LPSEDKLLQGRLFSYSDTQRHRIGPNYQQLPINCPFAQVNNYQRDGAMPFKQQTSSVNYEPNRYQDEPKQTPEYTEDTQP 404 (491)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHTCTTGGGSTTTCCSSCCCCSCCCCSSCTTCCCCSCCSSSCSCTTSCBCCGGGSCCCEE
T ss_pred ccCCChHHHHHHHHHHHHHHHhhcCccccCCCCCCCcccCCcchhhhcccccCCCCCCccCCcCCCCccCCCCCCCCCce
Confidence 999999999999999999999999999999999999999999999999998558899999999986 3444556666677
Q ss_pred ccccee-eeccCCCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCCHH-HHHHHHHHHHhhCHHHHHHHHHHhCCC
Q 042356 413 CGGRRE-KCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHE-IRHIWISYWSQACKSLGQKLASRLNVR 489 (492)
Q Consensus 413 ~~G~~~-~~~~~~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~~~-I~~r~l~~f~~vD~dlg~rVa~~l~~~ 489 (492)
++|.+. ++.+.++|||+|||+||++|++.||++||+||+++|+ +|+.+ ||+|+|++|++||++||++|+++|++.
T Consensus 405 ~~g~~~~~~~~~~~d~~~q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~~i~~~~~~~~~~~d~~~~~~v~~~~~~~ 481 (491)
T 2j2m_A 405 LHDDIHGRLEIEKTNNFGQAGEVYRRMTEEEQMALLNNLVNDLQ--QVRHENTVLLAICNFYRADASLGEKLSEALNVD 481 (491)
T ss_dssp CCCSEEEECCCSCCCTTHHHHHHHHHSCHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred eccceEeecccCCcchhhhhHHHHHcCCHHHHHHHHHHHHHHHc--CCCcHHHHHHHHHHHHHhCHHHHHHHHHHhCCc
Confidence 899888 7666688999999999999999999999999999999 68766 999999999999999999999999864
No 4
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=100.00 E-value=2.6e-146 Score=1198.67 Aligned_cols=475 Identities=44% Similarity=0.735 Sum_probs=455.2
Q ss_pred CCCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCC
Q 042356 13 NAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRA 92 (492)
Q Consensus 13 ~~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~ 92 (492)
..+++||++|+||.++++|+|+|.+||+||||++|+|||+||+|||||||++||||+||+|+|+++++++++|+|+||++
T Consensus 76 ~~~~~Tt~~G~pv~~~~~s~t~g~rGp~llqD~~l~eklahFdrErIPER~vHAKG~gA~G~F~vt~d~s~~t~A~~F~~ 155 (753)
T 3ttv_A 76 ENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKIAHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSD 155 (753)
T ss_dssp TTCBCBCTTSCBBSCTTCCEEESTTSCBBTTCHHHHHHHHHHHTCCCCCCSSCCSEEEEEEEEEESSCCTTTCCCGGGSC
T ss_pred CCCccccCCCCccCCCccceecCCCCccHHHHHHHHHHHHHhcccCCCccccCCCcceEEEEEEECCchhHHHhhhhhcC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCCh---
Q 042356 93 PGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQEN--- 169 (492)
Q Consensus 93 ~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~--- 169 (492)
+||+|||++||||++|++|++|+.||+|||||||||+||||||||||+||||+|||++|++|+|++|++|.|+++++
T Consensus 156 ~Gk~tPv~vRFStv~G~~gs~Dt~rD~RGfAvKFyt~eGn~DlVgnN~PVFFirDp~kFpdfiha~k~~P~t~~~~~~~~ 235 (753)
T 3ttv_A 156 PNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSA 235 (753)
T ss_dssp TTCCEEEEEEEECSSSCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGGHHHHHHHHSCCTTTCCCTTCCC
T ss_pred CCceeEEEEEecCCCCCCCCCccCCCCCcEEEEEEcCCCCcccccccCCccccCCHHHHHHHHHHhhcCCccCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -HHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCc
Q 042356 170 -WRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANH 248 (492)
Q Consensus 170 -~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~ 248 (492)
+++|+|++.|||++|+++|+||++++|.||++|+|||+|||+|+|++|+++||||||+|.+|+++|+++||.++.+.|+
T Consensus 236 ~~~~wdF~s~~PEs~h~~~~l~sdrg~P~Syr~m~g~g~htf~~vn~~G~~~~VKfh~~p~~G~~~l~~~EA~~~~g~dp 315 (753)
T 3ttv_A 236 HDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDP 315 (753)
T ss_dssp SHHHHHHHHHCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHHHCT
T ss_pred hHHHHHHHHhCHHHHHHHHHHhccCCCCCCcccCCcccccceEEEcCCCCEEEEEEEEEECCCCCCCCHHHHHHhhCCCc
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred hhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccc
Q 042356 249 SHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAI 328 (492)
Q Consensus 249 d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~ 328 (492)
|||++||+++|++|+||+|+|+||||+++|+..++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|+|
T Consensus 316 D~l~~DL~~~I~~G~~p~w~l~vQv~~~~d~~~~~f~~~D~TK~WPe~~~Pl~~VG~l~Lnrnp~n~fae~Eq~aF~P~~ 395 (753)
T 3ttv_A 316 DFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGH 395 (753)
T ss_dssp THHHHHHHHHHHHTCCCEEEEEEEEEEGGGTTCSSSCTTCTTSCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTC
T ss_pred hHHHHHHHHHHhcCCCCeEEEEEEeechhhhhcCCCCCccCCccCCCcCccceeeeEEEecCCCcchhhhhhcceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCchhhhhhhhhhHHHHHhhc-CCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCCC--ccC--
Q 042356 329 VVPGIYYSNDKLLQTRIFSYADTQRHRL-GPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPV--RHA-- 403 (492)
Q Consensus 329 ~~~Gi~ps~d~ilq~R~~aY~~s~~~R~-g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~--~~~-- 403 (492)
+||||+||+|||||+|+|+|+|||++|+ |+||+|||||||+|||+||||||+|++.++++.|||+|||+++. .+.
T Consensus 396 lvpGI~~S~DplLq~R~fsY~dtqr~RlgG~N~~qlPvN~p~~~~~~~~rDG~m~~~~~~~~~~Y~pns~~~~~~~~~~~ 475 (753)
T 3ttv_A 396 IVPGLDFTNDPLLQGRLYSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPP 475 (753)
T ss_dssp CCTTEECCCCHHHHHHHHHHHHHHHHHHTSTTGGGSGGGCCSSCCCCSCCCCTTCCCEECCSCSSSSCSTTTTCSBCCCC
T ss_pred ccCCcCCCCCcHhhhhhhhhHHHHHHhccCCCcccCCCCCCCCcccCccccccccccCCCCCCceeCCCCCCCCcccCcc
Confidence 9999999999999999999999999999 99999999999999999999999999998889999999999752 222
Q ss_pred ----CCCCCCCcccccceeeeccC-CCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHhhCHH
Q 042356 404 ----EMHPTPPEICGGRREKCIIP-KENNFKQPGERYRSWAPDRQERFICRWVDALSDPRV-THEIRHIWISYWSQACKS 477 (492)
Q Consensus 404 ----~~~~~~~~~~~G~~~~~~~~-~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v-~~~I~~r~l~~f~~vD~d 477 (492)
..|..++..++|.+.++... .+|||+|||+||++|++.||+|||+||+++|+ +| +++||+||+++|++||++
T Consensus 476 ~~~~~~~~~~~~~~~g~~~~~~~~~~~d~f~Q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~~i~~r~~~~~~~~d~~ 553 (753)
T 3ttv_A 476 GPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELS--KVVRPYIRERVVDQLAHIDLT 553 (753)
T ss_dssp CSSSCCBCCCCCEEEEEEEECCCGGGCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHH--TCSSHHHHHHHHHHHHTTCHH
T ss_pred cccccccccCCcccccceEeecccCccchhHHHHHHHHhCCHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHCHH
Confidence 13555566788988887653 57899999999999999999999999999999 56 578999999999999999
Q ss_pred HHHHHHHHhCCC
Q 042356 478 LGQKLASRLNVR 489 (492)
Q Consensus 478 lg~rVa~~l~~~ 489 (492)
||++|+++|++.
T Consensus 554 l~~~va~~l~~~ 565 (753)
T 3ttv_A 554 LAQAVAKNLGIE 565 (753)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhCCC
Confidence 999999999875
No 5
>1si8_A Catalase; N-terminal ARM, anti-parallel beta-barrel, wrapping region, terminal helical region, tetramer, heme group, oxidoreducta; HET: HEM; 2.30A {Enterococcus faecalis} SCOP: e.5.1.1
Probab=100.00 E-value=1.8e-146 Score=1157.57 Aligned_cols=473 Identities=41% Similarity=0.709 Sum_probs=457.7
Q ss_pred CcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCC
Q 042356 15 PFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPG 94 (492)
Q Consensus 15 ~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~G 94 (492)
+++||++|+||.++++|+|+|++||+||||.+|+|||+||+||||++|++||||+||+|+|+++++++++|+|+||+++|
T Consensus 4 ~~~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~G 83 (484)
T 1si8_A 4 QHLTTSQGSPVGDNQNSLTAGEFGPVLIQDVHLLEKLAHFNRERVPERVVHAKGAGAHGIFKVSQSMAQYTKADFLSEVG 83 (484)
T ss_dssp CBCBCTTSCBCSCSSSCEEESTTSCBBTTCHHHHHHHHHHHTCCCCCCSSCCSEEEEEEEEEESSCCTTTCCCGGGSSTT
T ss_pred CccccCCCcccCCCccceecCCCCCcccccHHHHHHHHHhcCCCCCCccccCCcceeEEEEEECCchhHhhhchhccCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred ceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHH
Q 042356 95 VQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVD 174 (492)
Q Consensus 95 k~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~ 174 (492)
|+|||++||||++|+++++|+.||+|||||||||+||+|||||||+||||++|+++|++|+|++|++|.|++++++++|+
T Consensus 84 k~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PvFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wd 163 (484)
T 1si8_A 84 KETPLFARFSTVAGELGSSDTLRDPRGFALKFYTDEGNYDLVGNNTPIFFIRDAIKFPDFIHSQKRNPRTHLKSPEAVWD 163 (484)
T ss_dssp CEEEEEEEEECSSCCTTCCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGGHHHHHHHHSBCTTTCSBCHHHHHH
T ss_pred ceeeEEEEecCCCCCCCCCcccCCcCceEEEEecCCCceeeeeccCcccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHH
Q 042356 175 FFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQD 254 (492)
Q Consensus 175 f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~d 254 (492)
|++.+||++|+++|+||++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++||+++|
T Consensus 164 f~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VK~h~~P~~Gv~~L~~~ea~~~~g~d~d~~~~D 243 (484)
T 1si8_A 164 FWSHSPESLHQVTILMSDRGIPLSFRHMHGFGSHTFKWVNAAGEVFFVKYHFKTNQGIKNLESQLAEEIAGKNPDFHIED 243 (484)
T ss_dssp HHHTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHHHCTTHHHHH
T ss_pred HHHhCchhHHHHHHHhccCCCCCCcccccccccCceEEEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCChhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888899999999
Q ss_pred HHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccc
Q 042356 255 LYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIY 334 (492)
Q Consensus 255 L~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ 334 (492)
|+++|++|++|+|+|+||||+++|+..++|||+|+||+|||+++|+++||+|+|++|++|+|++|||++|+|||++|||+
T Consensus 244 L~~aI~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~ 323 (484)
T 1si8_A 244 LHNAIENQEFPSWTLSVQIIPYADALTMKETLFDVTKTVSQKEYPLIEVGTMTLNRNPENYFAEVEQVTFSPGNFVPGIE 323 (484)
T ss_dssp HHHHHHTTCCCEEEEEEEEEEHHHHTTCHHHHTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEE
T ss_pred HHHHHHCCCCceEEEEEEeecchhhhcCCCCCCcCCccCCcccCCeeEeEEEEECCCccccccccccccccccccCCccc
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCC-CccCCCCCCCCccc
Q 042356 335 YSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDP-VRHAEMHPTPPEIC 413 (492)
Q Consensus 335 ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~-~~~~~~~~~~~~~~ 413 (492)
||+|||||+|++||++||++|+|+||+|||||||+||++||||||+|++.++++.|||+|||+.+ +...+.+..++..+
T Consensus 324 pS~D~lLq~R~fsY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~~ 403 (484)
T 1si8_A 324 ASPDKLLQGRLFAYGDAHRHRVGANSHQLPINQAKAPVNNYQKDGNMRFNNGNSEINYEPNSYTETPKEDPTAKISSFEV 403 (484)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGCCSSCCCCSCCCCTTCSCCCSCSCCCSSCSCTTSCBCCGGGCCCCCBC
T ss_pred cCCChhhhhHHHHHHHHHHHhhcCccccCCCCCCCCccCCCCcccccccccCCCCCCccCCcCCCCccCCCCCCCCCeee
Confidence 99999999999999999999999999999999999999999999999999889999999999986 34445566677778
Q ss_pred ccceeeeccCCCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHhhCHHHHHHHHHHhCCCC
Q 042356 414 GGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRV-THEIRHIWISYWSQACKSLGQKLASRLNVRP 490 (492)
Q Consensus 414 ~G~~~~~~~~~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v-~~~I~~r~l~~f~~vD~dlg~rVa~~l~~~~ 490 (492)
+|.+.++.+ ++|||+|||+||++|++.||++||+||+++|+ +| +++||+|++++|++||++||++|+++|++..
T Consensus 404 ~g~~~~~~~-~~~~~~q~~~~~~~~~~~~~~~l~~~~~~~l~--~~~~~~i~~~~~~~~~~~d~~~~~~v~~~~~~~~ 478 (484)
T 1si8_A 404 EGNVGNYSY-NQDHFTQANALYNLLPSEEKENLINNIAASLG--QVKNQEIIARQIDLFTRVNPEYGARVAQAIKQQA 478 (484)
T ss_dssp CSBEEECCC-CCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTC-
T ss_pred cCceEEecc-ccchhhhHHHHHHcCCHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhCHHHHHHHHHHhCCcc
Confidence 999888776 78999999999999999999999999999999 68 7899999999999999999999999998753
No 6
>1gwe_A Catalase; oxidoreductase, hdyrogen-peroxide:hydrogen peroxide oxidoreductase; HET: HEM; 0.88A {Micrococcus luteus} SCOP: e.5.1.1 PDB: 1gwh_A* 1hbz_A* 1gwf_A*
Probab=100.00 E-value=1.5e-145 Score=1153.47 Aligned_cols=475 Identities=39% Similarity=0.656 Sum_probs=456.8
Q ss_pred CCCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCC
Q 042356 13 NAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRA 92 (492)
Q Consensus 13 ~~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~ 92 (492)
...++||++|+||.++++|+|+|++||+||||.+|+|||+||+||||++|++||||+||+|+|+++++++++|+|+||+.
T Consensus 9 ~~~~~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~A~~F~~ 88 (503)
T 1gwe_A 9 HATGSTRQNGAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFEVTEDVSKYTKALVFQP 88 (503)
T ss_dssp TCCSCBCTTSSBCSCSSCCCBSTTTSCBCTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGST
T ss_pred CCCeeecCCCcccCCCccceecCCCCCcccccHHHHHHHHHhcCCCCCCcccCCCcceEEEEEEECCchHHhhhhhhccC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHH
Q 042356 93 PGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRI 172 (492)
Q Consensus 93 ~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~ 172 (492)
||+|||++||||++|+++++|+.||+|||||||||+||+|||||||+||||++|+++|++|+|++|++|.|++++++++
T Consensus 89 -Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~ 167 (503)
T 1gwe_A 89 -GTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTPIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQ 167 (503)
T ss_dssp -TCEEEEEEEEECSSSCTTSCTTSSCCCEEEEEEEETTEEEEEEEESSSCCSCSSGGGHHHHHHHHSBCTTTCCBCHHHH
T ss_pred -CCeeeEEEEeccCCCCCCCCcccCCcCceEEEEecCCCceeEeecCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhH
Q 042356 173 VDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHAT 252 (492)
Q Consensus 173 ~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~ 252 (492)
|+|++.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++||++
T Consensus 168 wdf~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~g~d~d~~~ 247 (503)
T 1gwe_A 168 WDFWTNNPESAHQVTYLMGPRGLPRTWREMNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLSNDEATKIAGENADFHR 247 (503)
T ss_dssp HHHHHTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHHHCTTHHH
T ss_pred HHHHHhChhhhhHHHHhhccCCCCCCcccccccccCceEEEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred HHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCc
Q 042356 253 QDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPG 332 (492)
Q Consensus 253 ~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~G 332 (492)
+||+++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+|++|++|+|++|||++|+|||++||
T Consensus 248 ~DL~~aI~~G~~p~w~l~VQl~~~~d~~~~~~~~~D~Tk~WPe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpG 327 (503)
T 1gwe_A 248 QDLFESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTISQKDYPRIKVGTLTLNRNPENHFAQIESAAFSPSNTVPG 327 (503)
T ss_dssp HHHHHHHHTTCCCEEEEEEEEEETTHHHHCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTT
T ss_pred HHHHHHHHcCCCCeEEEEEEeeCHHHHhcCCCCCCcCceeCCcccCCceEEEEEEecCCCccccccccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCC-CccCCCCCCCCc
Q 042356 333 IYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDP-VRHAEMHPTPPE 411 (492)
Q Consensus 333 i~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~-~~~~~~~~~~~~ 411 (492)
|+||+|||||+|++||++||++|+|+||+|||||||+||++||||||+|++.++++.|||+|||+.+ +...+.+..++.
T Consensus 328 I~pS~DplLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~ 407 (503)
T 1gwe_A 328 IGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRPKNAVHNYAFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDDGW 407 (503)
T ss_dssp EECCSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGCCSSCCCCSCCCCTTCCSCCTTCCSSSSCSSSCCCCCCCSSCTTCC
T ss_pred cCCCCChHHHHHHHHHHHHHHHhccCCcccCCcCCCCCccCCCchhhccccccCCCCCCcCCCcCCCCccCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999889999999999986 344456666667
Q ss_pred ccccceeeec--cC-CCCCccccchhcc-CCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHhC
Q 042356 412 ICGGRREKCI--IP-KENNFKQPGERYR-SWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLN 487 (492)
Q Consensus 412 ~~~G~~~~~~--~~-~~ddf~Qpr~fy~-~l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l~ 487 (492)
.++|.+.+.. +. ++|||+|||+||+ +|++.||++||+||+++|+ +|+++||+|++++|++||++||++|+++|+
T Consensus 408 ~~~g~~~~~~~~~~~~~d~~~Q~~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~~~~v~~~l~ 485 (503)
T 1gwe_A 408 EADGTLTREAQALRADDDDFGQAGTLVREVFSDQERDDFVETVAGALK--GVRQDVQARAFEYWKNVDATIGQRIEDEVK 485 (503)
T ss_dssp CCCCCCCCCCCCCCTTCCSSHHHHHHHHHTSCHHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred eecCceeEEeecCCCCcchhhhhHHHHHHcCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHHHHHHHHhC
Confidence 7889855544 43 7799999999999 9999999999999999999 689999999999999999999999999998
Q ss_pred CCC
Q 042356 488 VRP 490 (492)
Q Consensus 488 ~~~ 490 (492)
++.
T Consensus 486 ~~~ 488 (503)
T 1gwe_A 486 RHE 488 (503)
T ss_dssp TTC
T ss_pred CCC
Confidence 654
No 7
>1dgf_A Catalase; heme, NADPH, hydrogen peroxide, oxidoreductase; HET: HEM NDP; 1.50A {Homo sapiens} SCOP: e.5.1.1 PDB: 1dgg_A* 1f4j_A* 1qqw_A* 1dgh_A* 1dgb_A* 3rgp_A* 3re8_A* 3rgs_A* 3nwl_A* 4blc_A* 1th2_A* 1th3_A* 1th4_A* 1tgu_A* 7cat_A* 8cat_A*
Probab=100.00 E-value=6.9e-146 Score=1156.24 Aligned_cols=474 Identities=42% Similarity=0.754 Sum_probs=459.2
Q ss_pred CCCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCC
Q 042356 13 NAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRA 92 (492)
Q Consensus 13 ~~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~ 92 (492)
+.+++||++|+||.++++|+|+|++||+||||++|+|||+||+||||++|++||||+||+|+|+++++++++|+|+||++
T Consensus 19 ~~~~~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~ 98 (497)
T 1dgf_A 19 KADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEH 98 (497)
T ss_dssp CCCBCBCTTCCBCSCSSSCEEESTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSS
T ss_pred CCCcccCCCCcccCCCccceecCCCCCcccccHHHHHHHHhhcCCCCCCcccCCCcceeEEEEEECCChhHhhhchhccC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHH
Q 042356 93 PGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRI 172 (492)
Q Consensus 93 ~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~ 172 (492)
+||+|||++|||+++|+++++|+.||+|||||||||+||+|||||||+||||++|+++|++|+|++|++|.|++++++++
T Consensus 99 ~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~ 178 (497)
T 1dgf_A 99 IGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMV 178 (497)
T ss_dssp TTCEEEEEEEEECSSSCTTSCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGGHHHHHHHHSBCTTTCSBCHHHH
T ss_pred CCceeeEEEEeecCCCCCCCCCcCCCcCceEEEEecCCCceeEeecCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhH
Q 042356 173 VDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHAT 252 (492)
Q Consensus 173 ~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~ 252 (492)
|+|++.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++|||+
T Consensus 179 wdf~s~~PEs~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~g~d~d~~~ 258 (497)
T 1dgf_A 179 WDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGI 258 (497)
T ss_dssp HHHHHHCGGGHHHHHHHTSGGGSBSSSTTSCEECCSCEEEECTTSCEEEEEEEEEETTCCCBCCHHHHHHHHHHCTTHHH
T ss_pred HHHHHhCchhhhHHHHHhccCCCCCCccccccccccceEEEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred HHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCc
Q 042356 253 QDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPG 332 (492)
Q Consensus 253 ~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~G 332 (492)
+||+++|++|++|+|+|+||||+++|+..++|||+|+||+|||+++|+++||+|+|++|++|+|++|||++|+|||+|||
T Consensus 259 ~DL~~aI~~G~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpG 338 (497)
T 1dgf_A 259 RDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPG 338 (497)
T ss_dssp HHHHHHHHTTCCCEEEEEEEEECHHHHHHCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSSHHHHTTTCCCCTTCCCTT
T ss_pred HHHHHHHHcCCCceEEEEEEeechhhhhcCCCCCCcCceECCcccCCcEEEEEEEecCCCcccccccccccccccccCCc
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCC-CCCCCCCccCCceeec-CCCCCCcccCCCCCCCccCCCCCCCC
Q 042356 333 IYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP-KCAQHNNHYDGFMNFM-HRDEEIDYFPSRYDPVRHAEMHPTPP 410 (492)
Q Consensus 333 i~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p-~~~~~n~~rdG~m~~~-~~~~~~nY~pns~~~~~~~~~~~~~~ 410 (492)
|+||+|||||+|++||++||++|+|+||+||||||| +||++||||||+|++. ++++.|||+|||+.++...+.+..++
T Consensus 339 I~pS~D~lLq~R~fsY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~~rdG~m~~~~~~~~~~~y~pn~~~~~~~~~~~~~~~ 418 (497)
T 1dgf_A 339 IEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHS 418 (497)
T ss_dssp EEECSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGSCTTSCCCSSCCCCTTCCSCTTTTCCCSSSCSSCCCBCCGGGCCCC
T ss_pred cccCCChhhhhHHhHHHHHHHHhhcCchhcccccccccccccCccccCccccccCCCCCccccCCCCCCCcCCCCCCCCc
Confidence 999999999999999999999999999999999999 9999999999999997 66999999999998755555666777
Q ss_pred cccccceeeeccCCCCCccccchhcc-CCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHhCC
Q 042356 411 EICGGRREKCIIPKENNFKQPGERYR-SWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNV 488 (492)
Q Consensus 411 ~~~~G~~~~~~~~~~ddf~Qpr~fy~-~l~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l~~ 488 (492)
..++|.+.++.+.++|||+|||+||+ +|++.||++||+||+++|+ +|+++||+|+|++|++||++||++|+++|++
T Consensus 419 ~~~~g~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~~~~v~~~~~~ 495 (497)
T 1dgf_A 419 IQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLK--DAQIFIQKKAVKNFTEVHPDYGSHIQALLDK 495 (497)
T ss_dssp EECCSEEEECCCTTSCCSHHHHHHHHHTSCHHHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred ccccCceeeecCCCcchhhhhHHHHHHcCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHHHHHHHHhcC
Confidence 77899988888777899999999999 9999999999999999999 6899999999999999999999999999863
No 8
>1qwl_A KATA catalase; beta barrel, azide complex, oxyferryl complex, oxidoreductas; HET: HEM; 1.60A {Helicobacter pylori} SCOP: e.5.1.1 PDB: 1qwm_A* 2a9e_A* 2iqf_A*
Probab=100.00 E-value=6.5e-146 Score=1156.80 Aligned_cols=474 Identities=44% Similarity=0.739 Sum_probs=456.6
Q ss_pred CCCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCC
Q 042356 13 NAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRA 92 (492)
Q Consensus 13 ~~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~ 92 (492)
+...+||++|+||.++++|+|+|++||+||||.+|+|||+||+||||++|++||||+||+|+|+++++++++|+|+||++
T Consensus 4 ~~~~~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~A~~F~~ 83 (505)
T 1qwl_A 4 KDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSK 83 (505)
T ss_dssp CCCCCBCTTSCBCSCSSCCCBSSTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSS
T ss_pred CCCcccCCCCCccCCCccceecCCCCCCcCCcHHHHHHHHHhcCCCCCCccccCCcceeEEEEEECCCchHhhhchhccC
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHH
Q 042356 93 PGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRI 172 (492)
Q Consensus 93 ~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~ 172 (492)
+||+|||++||||++|+++++|+.||+|||||||||+||+|||||||+||||++||++|++|+|++|++|.|++++++++
T Consensus 84 ~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~iha~k~~p~t~~~d~~~~ 163 (505)
T 1qwl_A 84 VGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMV 163 (505)
T ss_dssp TTCEEEEEEEEECSSCCTTSCSSSSSCCEEEEEEEETTEEEEEEEESSSCCSCSSGGGHHHHHHHHSCCTTTCSCCHHHH
T ss_pred CCceeeEEEEeccCCCCCCCCcccCCcCceEEEEecCCCceeEeecCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhH
Q 042356 173 VDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHAT 252 (492)
Q Consensus 173 ~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~ 252 (492)
|+|++.+||++|+++|+++++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++|||+
T Consensus 164 wdf~s~~PEs~h~~~~l~sdrg~P~syr~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~g~d~d~~~ 243 (505)
T 1qwl_A 164 WDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEIRKHDPDSNQ 243 (505)
T ss_dssp HHHHHHCGGGHHHHHHHHSGGGSBSSGGGSCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHTTCTTHHH
T ss_pred HHHHHhChhHHHHHHHHhccCCCCCCcccccccccCceeEEcCCCCEEEEEEEEEeCCCcCCCCHHHHHHhcCCCccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCc
Q 042356 253 QDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPG 332 (492)
Q Consensus 253 ~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~G 332 (492)
+||+++|++|++|+|+|+||||+++|+..++|||+|+||+|||+++|+++||+|+|++|++|+|++|||++|+|||+|||
T Consensus 244 ~DL~~aI~~G~~p~w~l~VQl~~~~d~~~~~~~~~D~Tk~WPe~~~P~i~VG~L~Lnrnp~n~fae~EqlaF~P~~~vpG 323 (505)
T 1qwl_A 244 RDLFDAIARGDYPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYTQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPG 323 (505)
T ss_dssp HHHHHHHHTTCCCEEEEEEEEEEGGGTTTCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTT
T ss_pred HHHHHHHHcCCCceEEEEEEeechHHhhcCCCCCCcCCeeCCccCCCceEEEEEEECCCcccchhhhhhhhcCccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCCCccCCCCCCCCcc
Q 042356 333 IYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEI 412 (492)
Q Consensus 333 i~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~~~~~~~~~~~~~ 412 (492)
|+||+|||||+|++||++||++|+|+||+|||||||+||++||||||+|+..++++.|||+|||+.++...+.+..++..
T Consensus 324 I~pS~DplLq~R~fsY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pns~~~~~~~~~~~~~~~~ 403 (505)
T 1qwl_A 324 IGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFN 403 (505)
T ss_dssp EECCCCHHHHHHHHHHHHHHHHHHCTTGGGSGGGSCSSCCCCSCCCCTTCCCTTTTCCCCSSCSSSCCCCCGGGCCCCBC
T ss_pred cccCCChhhhhHHhHHHHHHHHhccCCcccCCCCCCCCccCCCCccccccccCCCCCCCccCCcCCCccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999336789999999999875555566667777
Q ss_pred ccc-----ceeeeccC--CCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCC-HHHHHHHHHHHHhhCHHHHHHHHH
Q 042356 413 CGG-----RREKCIIP--KENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVT-HEIRHIWISYWSQACKSLGQKLAS 484 (492)
Q Consensus 413 ~~G-----~~~~~~~~--~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~-~~I~~r~l~~f~~vD~dlg~rVa~ 484 (492)
++| .+.++.+. ++|||+|||+||++|++.||++||+||+++|+ +|+ ++||+|+|++|++||++||++|++
T Consensus 404 ~~g~~~~~~~~~~~~~~~~~d~~~Q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~~i~~~~~~~~~~~d~~~~~~v~~ 481 (505)
T 1qwl_A 404 LAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLA--HVTHKEIVDKQLEHFKKADPKYAEGVKK 481 (505)
T ss_dssp GGGTCSCCCBSCCCHHHHCCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred ccCcccceeeEeeccCCCCcchhhhhHHHHHhCCHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 788 67777653 78999999999999999999999999999999 687 899999999999999999999999
Q ss_pred HhCC
Q 042356 485 RLNV 488 (492)
Q Consensus 485 ~l~~ 488 (492)
+|++
T Consensus 482 ~l~~ 485 (505)
T 1qwl_A 482 ALEK 485 (505)
T ss_dssp HHHH
T ss_pred HhCC
Confidence 9974
No 9
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=100.00 E-value=8.9e-145 Score=1180.94 Aligned_cols=474 Identities=41% Similarity=0.704 Sum_probs=451.3
Q ss_pred CCCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCC
Q 042356 13 NAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRA 92 (492)
Q Consensus 13 ~~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~ 92 (492)
+.+++||++|+||.| ++|+|+|.+||+||||++|+|||+||+|||||||++||||+||+|+|+++++++++|+|+||++
T Consensus 20 ~~~~~Tt~~G~pv~~-~~s~~~g~~Gp~llqD~~l~eklahFdrErIPeR~vHAKG~gA~G~F~vt~d~s~~t~A~~f~~ 98 (688)
T 3ej6_A 20 NGQFMTTDFGGNIEE-QFSLKAGGRGSTLLEDFIFRQKLQHFDHERIPERVVHARGAGAHGIFTSYGDWSNITAASFLGA 98 (688)
T ss_dssp TTCBCBCTTCCBCCC-SSCCEESTTCCBBTTCHHHHHHHHHHHTCCCCCCSSCCSEEEEEEEEEECSBCTTTCCCSTTBS
T ss_pred CCCccccCCCCCcCC-CcceecCCCCchhHHHHHHHHHHHHhcccCCcccccccCceEEEEEEEECCCchHhhhhHhhcC
Confidence 468999999999996 8999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCCh---
Q 042356 93 PGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQEN--- 169 (492)
Q Consensus 93 ~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~--- 169 (492)
+||+|||++||||++|+++++|+.||+|||||||||+||||||||||+||||+|||++|++|+|++|++|.|+++++
T Consensus 99 ~Gk~tPv~vRFStv~G~~gs~Dt~rD~RGfAvKFyt~eGn~DlVgnN~PVFFirDp~kFpdfiha~k~~P~t~~~~~~~~ 178 (688)
T 3ej6_A 99 KDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATA 178 (688)
T ss_dssp TTCEEEEEEEEECSSSCTTCCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGGHHHHHHHHSCBTTTTBSTTCCC
T ss_pred CCceeEEEEEecCCCCCCCCcccCCCCccEEEEEEcCCCCcccccccCCccccCCHHHHHHHHHhhccCCCcCCCChhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred -HHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCc
Q 042356 170 -WRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANH 248 (492)
Q Consensus 170 -~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~ 248 (492)
+++|+|++.|||++|+++|+||++++|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++
T Consensus 179 ~~~~wdF~s~~PEs~h~~~~l~sdrg~P~Syr~m~g~g~htf~~vn~~G~~~~VKfh~~p~~G~~~l~~~EA~~~~g~dp 258 (688)
T 3ej6_A 179 HDSAWDFFSSQPSALHTLFWAMSGNGIPRSYRHMDGFGIHTFRLVTEDGKSKLVKWHWKTKQGKAALVWEEAQVLAGKNA 258 (688)
T ss_dssp SHHHHHHHHHSGGGHHHHHHHHSGGGSBSCSTTCCEECCSCEEEECTTSCEEEEEEEEEESSCCCBCCHHHHHHHHHHCT
T ss_pred hhHHHHHHHhChhhHHHHHHHhccCCCCCCcccCCcccccceEEEeCCCCEEEEEEEEEECCCCCCCCHHHHHHhhCCCc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred hhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccc
Q 042356 249 SHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAI 328 (492)
Q Consensus 249 d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~ 328 (492)
|||++||+++|++|++|+|+|+||||+++|+.+++|+|+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||
T Consensus 259 D~l~~DL~~~I~~G~~p~w~l~vQv~~~~d~~~~~f~~~D~Tk~WPe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~ 338 (688)
T 3ej6_A 259 DFHRQDLWDAIESGNAPSWELAVQLIDEDKAQAYGFDLLDPTKFLPEEFAPLQVLGEMTLNRNPMNYFAETEQISFQPGH 338 (688)
T ss_dssp THHHHHHHHHHHTTCCCEEEEEEEEECGGGSSCSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTC
T ss_pred cHHHHHHHHHHhcCCCceEEEEEEEechhhhhhcCCCCCcCCeecCCccCcceEEEEEEEcCCccchhhhhhhcccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCchhhhhhhhhhHHHHHhhc-CCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCC--CccCCC
Q 042356 329 VVPGIYYSNDKLLQTRIFSYADTQRHRL-GPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDP--VRHAEM 405 (492)
Q Consensus 329 ~~~Gi~ps~d~ilq~R~~aY~~s~~~R~-g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~--~~~~~~ 405 (492)
+||||+||+|||||+|+|+|+|||++|+ |+||+|||||||+||++||||||+|++..+++.+||+|||+.+ +...+.
T Consensus 339 lvpGI~~S~DplLq~R~fsY~dtqr~Rl~G~N~~qlPvN~p~~~~~~~~rDG~m~~~~~~~~~~y~pn~~~~~~~~~~~~ 418 (688)
T 3ej6_A 339 IVRGVDFTEDPLLQGRLYSYLDTQLNRHRGPNFEQLPINRPVSGVHNNHRDGQGQAWIHKNIHHYSPSYLNKGYPAQANQ 418 (688)
T ss_dssp CCTTEECCCCHHHHHHHHHHHHHHHHHHSSSCGGGSTTTCCSSCCCSSCCCCTTCCCEECCSCCSSSCTTTTTCSBCCCS
T ss_pred cCCCcCCCCChHhhhhhhhhHHHHHhhccCCChhhCCCCCCCCCcCCcCcCCccccccCCCCCCcCCCCCCCCCCccCcc
Confidence 9999999999999999999999999998 9999999999999999999999999876556678999999964 222221
Q ss_pred ------CCCCCcccccceeeeccC-CCCCccccchhccCCCHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHhhCHH
Q 042356 406 ------HPTPPEICGGRREKCIIP-KENNFKQPGERYRSWAPDRQERFICRWVDALSDPRV-THEIRHIWISYWSQACKS 477 (492)
Q Consensus 406 ------~~~~~~~~~G~~~~~~~~-~~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v-~~~I~~r~l~~f~~vD~d 477 (492)
+..+...++|.+.++.+. .+|||+|||+||++|++.||+|||+||+++|+ +| +++||+||+++|++||++
T Consensus 419 ~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~Q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~~i~~r~~~~~~~~d~~ 496 (688)
T 3ej6_A 419 TVGRGFFTTPGRTASGVLNRELSATFDDHYTQPRLFFNSLTPVEQQFVINAIRFEAS--HVTNEQVKKNVLEQLNKISND 496 (688)
T ss_dssp SSTTCCCCCTTCEEEEEEESSCCGGGCCCSHHHHHHHHTSCHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHHCHH
T ss_pred cccCccccCCCceeecceEeccCcCCcchhHHHHHHHHhCCHHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHhCHH
Confidence 334555789999888764 57899999999999999999999999999999 57 689999999999999999
Q ss_pred HHHHHHHHhCCC
Q 042356 478 LGQKLASRLNVR 489 (492)
Q Consensus 478 lg~rVa~~l~~~ 489 (492)
||++|+++|++.
T Consensus 497 ~~~~va~~l~~~ 508 (688)
T 3ej6_A 497 VAKRVAVALGLE 508 (688)
T ss_dssp HHHHHHHHHTSC
T ss_pred HHHHHHHHhCCC
Confidence 999999999864
No 10
>1a4e_A Catalase A; oxidoreductase, peroxidase; HET: HEM; 2.40A {Saccharomyces cerevisiae} SCOP: e.5.1.1
Probab=100.00 E-value=5.1e-145 Score=1147.43 Aligned_cols=471 Identities=38% Similarity=0.639 Sum_probs=453.0
Q ss_pred CCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCC
Q 042356 14 APFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAP 93 (492)
Q Consensus 14 ~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~ 93 (492)
.+++||++|+||.++++|+|+|++||+||||.+|+|||+||+||||++|++||||+||+|+|+++++++++|+|+||+++
T Consensus 5 ~~~~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~ 84 (488)
T 1a4e_A 5 DRVVTNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIPQRNPHAHGSGAFGYFEVTDDITDICGSAMFSKI 84 (488)
T ss_dssp TCBCBCTTSCBCSSSSCEEEETTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSST
T ss_pred CcccccCCCCccCCCccceecCCCCCcccccHHHHHHHHhhcCCCCCccccCCCceEEEEEEEECCCchHhhhchhccCC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHH
Q 042356 94 GVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIV 173 (492)
Q Consensus 94 Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~ 173 (492)
||+|||++||||++|+++++|+.||+|||||||||+||+|||||||+||||++||++|++|+|++|++|.|++++++++|
T Consensus 85 Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~w 164 (488)
T 1a4e_A 85 GKRTKCLTRFSTVGGDKGSADTVRDPRGFATKFYTEEGNLDWVYNNTPVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFW 164 (488)
T ss_dssp TCEEEEEEEEECSSSCTTCCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCTTHHHHHHHHHSCCTTTCSCCHHHHH
T ss_pred CceeeEEEEeecCCCCCCCCCccCCcCceEEEEecCCCccceeeecCCccccCCHHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh--CchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhh
Q 042356 174 DFFSH--HPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHA 251 (492)
Q Consensus 174 ~f~~~--~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l 251 (492)
+|++. +||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++|||
T Consensus 165 df~s~~~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~g~d~d~~ 244 (488)
T 1a4e_A 165 DFLTTPENQVAIHQVMILFSDRGTPANYRSMHGYSGHTYKWSNKNGDWHYVQVHIKTDQGIKNLTIEEATKIAGSNPDYC 244 (488)
T ss_dssp HHHTSGGGGGGHHHHHHHHSGGGSBSCGGGCCEECCSCEEEECTTSCEEEEEEEEEESSCCCBCCHHHHHHHHHHCTTHH
T ss_pred HHHhccCChHHhhHHHHhhccCCCCCCccccccccccceEEEcCCCCEEEEEEEEEECCCCCCCCHHHHHHhcCCChhHH
Confidence 99999 9999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred HHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCC
Q 042356 252 TQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVP 331 (492)
Q Consensus 252 ~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~ 331 (492)
++||+++|++|++|+|+|+||||+++|+..++|||+|+||+|||+++|+++||+|+|++|++|+|++|||++|+|||++|
T Consensus 245 ~~dL~~~I~~g~~p~w~l~vQl~~~~d~~~~~f~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vp 324 (488)
T 1a4e_A 245 QQDLFEAIQNGNYPSWTVYIQTMTERDAKKLPFSVFDLTKVWPQGQFPLRRVGKIVLNENPLNFFAQVEQAAFAPSTTVP 324 (488)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEEECHHHHHTSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCT
T ss_pred HHHHHHHHHcCCCCeEEEEEEeecHHHHhcCCCCCCCCCCcCCcccCCceEEEEEEecCCCcchhhhhhhHhcCcccccC
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCC--CCCCccCCceeec-CCCCCCcccCCCCC---CCccCCC
Q 042356 332 GIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCA--QHNNHYDGFMNFM-HRDEEIDYFPSRYD---PVRHAEM 405 (492)
Q Consensus 332 Gi~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~--~~n~~rdG~m~~~-~~~~~~nY~pns~~---~~~~~~~ 405 (492)
||+||+|||||+|++||++||++|+|+||+|||||||+|| ++||||||+|++. ++++.|||+|||++ +....+.
T Consensus 325 GI~pS~D~lLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~~~rdG~m~~~~~~~~~~~y~pn~~~~~~~~~~~~~ 404 (488)
T 1a4e_A 325 YQEASADPVLQARLFSYADAHRYRLGPNFHQIPVNCPYASKFFNPAIRDGPMNVNGNFGSEPTYLANDKSYTYIQQDRPI 404 (488)
T ss_dssp TEEECSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGSCTTSCCCCTTSCCCTTCCSCTTTTCCSSCCTTSCCBCCCTTCCS
T ss_pred CcCCCCChHHHHHHHHHHHHHHHhcccccccCCcCCCCCcccccChhhccccccccCCCCCcccccCccCCCCCCccCCC
Confidence 9999999999999999999999999999999999999999 9999999999997 66999999999997 3334445
Q ss_pred CCCCCcccccceeeeccC---CCCCccccchhccCC--CHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhCHHHHH
Q 042356 406 HPTPPEICGGRREKCIIP---KENNFKQPGERYRSW--APDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQ 480 (492)
Q Consensus 406 ~~~~~~~~~G~~~~~~~~---~~ddf~Qpr~fy~~l--~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~~vD~dlg~ 480 (492)
+...+ .++|.+.++.+. ++|||+|||+||++| ++.||++||+||+++|+ +|+++||+||+++|++||++||+
T Consensus 405 ~~~~~-~~~g~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~~~ 481 (488)
T 1a4e_A 405 QQHQE-VWNGPAIPYHWATSPGDVDFVQARNLYRVLGKQPGQQKNLAYNIGIHVE--GACPQIQQRVYDMFARVDKGLSE 481 (488)
T ss_dssp STTSC-CEEECEEEECCCCCSSSHHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHTTCHHHHH
T ss_pred CcCCC-CccccEEEeecccCCCcchhhhHHHHHHhcCCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHHH
Confidence 55432 468988888764 678999999999999 99999999999999999 68999999999999999999999
Q ss_pred HHHHHhC
Q 042356 481 KLASRLN 487 (492)
Q Consensus 481 rVa~~l~ 487 (492)
+|+++|+
T Consensus 482 ~v~~~l~ 488 (488)
T 1a4e_A 482 AIKKVAE 488 (488)
T ss_dssp HHHHHHC
T ss_pred HHHHhhC
Confidence 9999985
No 11
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=100.00 E-value=4.1e-143 Score=1171.28 Aligned_cols=472 Identities=41% Similarity=0.704 Sum_probs=451.1
Q ss_pred CCcccccCCccccCCCCccccCCCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCC
Q 042356 14 APFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAP 93 (492)
Q Consensus 14 ~~~~t~~~g~p~~~~~~~~~~g~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~ 93 (492)
.++|||++|+|| ++++|+|+|.+||+||||++|+|||+||+|||||||++||||+||+|+|+++++++++|+|+||+++
T Consensus 13 ~~~~tt~~G~pv-~~~~s~~~g~~Gp~ll~D~~l~ekl~hFdreripeR~vHAKG~ga~G~F~vt~d~~~~t~A~~F~~~ 91 (688)
T 2iuf_A 13 DVYLTSNVGGPI-QDENSLSAGQRGATLLQDFIFREKIQRFDHERVPERAVHARGTGAHGTFTSYGDWSNLTAASFLSAE 91 (688)
T ss_dssp SCCCBCTTSCBC-CCSSCCEESTTCCBCTTCHHHHHHHHHHHTCCCCCCSSCCSEEEEEEEEEESSCCTTTCCCGGGSST
T ss_pred CCceecCCCccc-CCccccccCCCCChhhhHHHHHHHHhhcccCCCccccccCCcceeEEEEEECCCchHhhhhhhhcCC
Confidence 457999999999 9999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCCh----
Q 042356 94 GVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQEN---- 169 (492)
Q Consensus 94 Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~---- 169 (492)
||+|||++||||++|+++++|+.||+|||||||||+||||||||||+||||+|||++|++|+|++|++|.|+++++
T Consensus 92 Gk~tPv~vRFStv~G~~gs~Dt~rd~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~i~a~k~~P~t~~~~~~~a~ 171 (688)
T 2iuf_A 92 GKETPMFTRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNQIPQAATAH 171 (688)
T ss_dssp TCEEEEEEEEECSSCCTTCCTTSSCCCEEEEEEEETTEEEEEEEESSSSCSCSCGGGHHHHHHHHSCCTTTCCSTTCCCS
T ss_pred CceEEEEEEccCCCCCCCCCcccCCcCceEEEEecCCCCcceeeecCCccccCCHHHHHHHHHHhCCCCCCCCCchhhhH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred HHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCch
Q 042356 170 WRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHS 249 (492)
Q Consensus 170 ~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d 249 (492)
+++|+|++.+||+.|+++|++|++++|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++|
T Consensus 172 ~~~~df~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~G~~~L~~~ea~~~~g~dpd 251 (688)
T 2iuf_A 172 DSAWDFFSQQPSVLHTLLWAXAGHGIPRSFRHVNGFGVHTFRLVTDDGKTKLVKFHWKGLQGKASFVWEEAQQTAGKNAD 251 (688)
T ss_dssp HHHHHHHHHSGGGHHHHHHHHTGGGSBSCGGGCCEEEEEEEEEECTTCCEEEEEEEEEESSCCCBCCHHHHHHHHHHCTT
T ss_pred HHHHHHHHhCcchHHHHHHHccCCCCCCCcccCCcccccceEEEccCCCEEEEEEEEEeCCCcCCCCHHHHHHhcCCCcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999988888999
Q ss_pred hhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhccccccccccc
Q 042356 250 HATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIV 329 (492)
Q Consensus 250 ~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~ 329 (492)
||++||+++|++|+||+|+|+||||+++|+++++|+|+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+
T Consensus 252 ~l~~dL~~~I~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~WPe~~~P~~~VG~l~Lnrnp~n~fae~Eq~aF~P~~~ 331 (688)
T 2iuf_A 252 FXRQDLFQSIQAGRFPEWELGVQIMQEQDQLKFGFDLLDPTKIVPEELVPVTILGKMQLNRNPXNYFAETEQVMFQPGHI 331 (688)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEEEECGGGTTTTSSCTTCTTCCCCTTTSCEEEEEEEEEEECCSSHHHHTTTCCCCTTCC
T ss_pred hhhHHHHHHHhcCCCceEEEEEEEechHHhhcCCCCCCcCCccCCcccCCceEEEEEEEcCCccchhhhhhhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCchhhhhhhhhhHHHHHhhcC-CCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCCC--ccCC--
Q 042356 330 VPGIYYSNDKLLQTRIFSYADTQRHRLG-PNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPV--RHAE-- 404 (492)
Q Consensus 330 ~~Gi~ps~d~ilq~R~~aY~~s~~~R~g-~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~--~~~~-- 404 (492)
||||+||+|||||+|+++|.+||++|+| +||+|||||||+||++||||||+|++.++++.|||+|||+.+. .+.+
T Consensus 332 vpGI~~S~DplLq~R~fsY~ds~r~Rlgg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pns~~~~~~~~~~~~ 411 (688)
T 2iuf_A 332 VRGVDFTEDPLLQGRLFSYLDTQLNRHGGPNFEQLPINRPRAPIHNNNRDGAGQMFIPLDPNAYSPNTENKGSPKQANET 411 (688)
T ss_dssp CTTEECCCCHHHHHHHHHHHHHHHHHHSSSCGGGSTTTCCSSCCCCSCCCCTTCCCCCCCSCCCSSCSTTTTCSCCCCSS
T ss_pred CCCcCCCCChHHHhHHhHHHHHHHHhccCCcccccccCCCCCccCCccccccccccCCCCCCccccCcCCCCCccccccc
Confidence 9999999999999999999999999995 9999999999999999999999999998888999999999752 2222
Q ss_pred ---CCCCCCccc-ccceeeeccCC-CCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCC-HHHHHHHHHHHHhhCHHH
Q 042356 405 ---MHPTPPEIC-GGRREKCIIPK-ENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVT-HEIRHIWISYWSQACKSL 478 (492)
Q Consensus 405 ---~~~~~~~~~-~G~~~~~~~~~-~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~-~~I~~r~l~~f~~vD~dl 478 (492)
.|..++..+ +|.+.++.+.+ +|||+|||+||++|++.||+|||+||+++|+ +|+ ++||+||+++|++||++|
T Consensus 412 ~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~q~~~~~~~~~~~~~~~l~~~~~~~l~--~~~~~~i~~~~~~~~~~~d~~~ 489 (688)
T 2iuf_A 412 VGKGFFTAPERTASGKLQRTLSTTFENNWSQPRLFWNSLVNAQKEFIVDAXRFETS--NVSSSVVRDDVIIQLNRISDNL 489 (688)
T ss_dssp STTCCCCCTTCCCCSCEEECCCGGGCCCSHHHHHHHHTSCHHHHHHHHHC-CHHHH--TCCCHHHHHHHHHHHHHHCHHH
T ss_pred cCCCcccCccccccCceEEeccccccchhhhHHHHHHcCCHHHHHHHHHhcchhhc--CCCcHHHHHHHHHHHHHhCHHH
Confidence 454555566 89888877643 7999999999999999999999999999999 675 899999999999999999
Q ss_pred HHHHHHHhCC
Q 042356 479 GQKLASRLNV 488 (492)
Q Consensus 479 g~rVa~~l~~ 488 (492)
|++|+++|++
T Consensus 490 ~~~v~~~l~~ 499 (688)
T 2iuf_A 490 ATRVASAIGV 499 (688)
T ss_dssp HHHHHTTTTC
T ss_pred HHHHHHHhCC
Confidence 9999999986
No 12
>2xq1_A Peroxisomal catalase; oxidoreductase, hydrogen peroxide detoxification, PTS1; HET: HEM; 2.90A {Pichia angusta}
Probab=100.00 E-value=2.8e-143 Score=1137.55 Aligned_cols=470 Identities=40% Similarity=0.706 Sum_probs=451.5
Q ss_pred CcccccCCccccCCCCccccC----------CCCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchh
Q 042356 15 PFFTTNSGAPVWNNNSSMTIG----------PRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNL 84 (492)
Q Consensus 15 ~~~t~~~g~p~~~~~~~~~~g----------~~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~ 84 (492)
+++||++|+||.++++|+|+| .+||+||||.+|+|||+||+||||++|++||||+||+|+|+++++++++
T Consensus 7 ~~~tt~~G~pv~~~~~s~~~g~~~~~~~~~~~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~dis~~ 86 (509)
T 2xq1_A 7 PVFTTSQGCPVSDPFTTQRIPLDSTGYKYAPPIGPLLLQDFKLIDTLSHFDRERIPERVVHAKGAGAYGVFEVTDDITDV 86 (509)
T ss_dssp CBCBCTTCCBCSCTTCEEECCBCCTTCSSCCCCCCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTT
T ss_pred CccccCCCcccCCCccceecccccccccccCCCCCcccccHHHHHHHHhhcCCCCCCccccCCcceeEEEEEECCchhHh
Confidence 689999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCC
Q 042356 85 TCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKS 164 (492)
Q Consensus 85 ~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t 164 (492)
|+|+||+++||+|||++||||++|+++++|+.||+|||||||||+||||||||||+||||++|+++|++|+|++|++|.|
T Consensus 87 t~A~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~iha~k~~p~t 166 (509)
T 2xq1_A 87 CSAKFLDTVGKKTRIFTRFSTVGGEKGSADTARDPRGFATKFYTEDGNLDLVYNNTPIFFIRDPIKFPHFIHTQKRNPAT 166 (509)
T ss_dssp CCCGGGSSTTCEEEEEEEEECSSCCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSCCSCSSGGGHHHHHHHHSBCTTT
T ss_pred hhchhccCCCceeeEEEEeecCCCCCCCCCcCCCcCceEEEEecCCCceeeeecCCCccccCCHHHHHHHHHHhCCCCcc
Confidence 99999998999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhc
Q 042356 165 HIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVG 244 (492)
Q Consensus 165 ~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~ 244 (492)
++++++++|+|++.+||++|+++|+++++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.
T Consensus 167 ~~~d~~~~~df~s~~Pes~h~~~~l~sdrg~P~syr~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~ 246 (509)
T 2xq1_A 167 NLKDPNMFWDYLTANDESLHQVMYLFSNRGTPASYRTMNGYSGHTYKWYNSKGEWVYVQVHFIANQGVHNLLDEEAGRLA 246 (509)
T ss_dssp CSBCHHHHHHHHHHSGGGHHHHHHHHSGGGSBSCSTTCCEECCSCEEEECTTSCEEEEEEEEEETTCCCBCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHhChhhhhhHHHhhccCCCCCChhhccCccccceeeecCCCCEEEEEEEEEeCCCCCCCCHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccc
Q 042356 245 GANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAF 324 (492)
Q Consensus 245 ~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF 324 (492)
+.++|||++||+++|++|++|+|+|+||||+++|+..++|||+|+||+|||+++|+++||+|+|++|++|+|++|||++|
T Consensus 247 g~d~d~~~~DL~~~I~~g~~p~w~l~VQl~~~~d~~~~~f~~~D~Tk~WPe~~~P~i~VG~L~Lnrnp~n~fae~EqlaF 326 (509)
T 2xq1_A 247 GEDPDHSTRDLWEAIEKGDYPSWECYIQTMTLEQSKKLPFSVFDLTKVWPHKDFPLRHFGRFTLNENPKNYYAETEQIAF 326 (509)
T ss_dssp HHCTTHHHHHHHHHHHHTCCCEEEEEEEEECHHHHTTCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCC
T ss_pred CCChhHHHHHHHHHHHcCCCceEEEEEEeecHHHHhcCCCCCCcCcccCCcccCCceEeEEEEECCCccchhhhhhhhhc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCC--CCCCccCCceeec-CCCCCCcccCCCCCCC-
Q 042356 325 CPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCA--QHNNHYDGFMNFM-HRDEEIDYFPSRYDPV- 400 (492)
Q Consensus 325 ~P~~~~~Gi~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~--~~n~~rdG~m~~~-~~~~~~nY~pns~~~~- 400 (492)
+|||++|||+||+|||||+|+++|++||++|+|+||+|||||||+|| ++||||||+|++. |+++.|||+|||+.+.
T Consensus 327 ~P~~~vpGI~pS~D~lLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~~~rdG~m~~~~~~~~~~~y~pn~~~~~~ 406 (509)
T 2xq1_A 327 SPSHTVPGMEPSNDPVLQSRLFSYPDTHRHRLGPNYHQIPVNCPLKSGSFNPINRDGPMCVDGNLGGTPNYANAYNCPIQ 406 (509)
T ss_dssp CTTCCCTTEEECSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGSCCSSCCCCTTCCCCTTCCSCTTTTCCSSTTCTTCCCB
T ss_pred CccccCCCcCCCCChHHHHHHHHHHHHHHHhhccccccCCccCCCCccccCCcccccccccccCCCCcccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999 9999999999997 6699999999999763
Q ss_pred ---ccCCC--CCCCCcccccceeeeccC-CCCCccccchhccCC--CHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 042356 401 ---RHAEM--HPTPPEICGGRREKCIIP-KENNFKQPGERYRSW--APDRQERFICRWVDALSDPRVTHEIRHIWISYWS 472 (492)
Q Consensus 401 ---~~~~~--~~~~~~~~~G~~~~~~~~-~~ddf~Qpr~fy~~l--~~~ek~~Li~Nia~~L~~~~v~~~I~~r~l~~f~ 472 (492)
.+.+. +..+ .++|.+.++.+. ++|||+|||+||++| ++.||++||+||+++|+ +|+++||+|++++|+
T Consensus 407 ~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~ 482 (509)
T 2xq1_A 407 YAVSPKASGNKPDE--KYTGEVVPYHWEHTDYDYFQPKMFWKVLGRTPGEQESLVKNVANHVS--AADEFIQDRVYEYFS 482 (509)
T ss_dssp CCCC------CCCC--CEEECCEEECCCCCGGGGHHHHHHHHHTTSSTTHHHHHHHHHHHHHT--TSCHHHHHHHHHHHT
T ss_pred CCCcCCCcCCcCCC--CcccceEeecCCCCcchhhhHHHHHHhcCCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHH
Confidence 22222 4443 458988888874 679999999999999 99999999999999999 689999999999999
Q ss_pred hhCHHHHHHHHHHhCC
Q 042356 473 QACKSLGQKLASRLNV 488 (492)
Q Consensus 473 ~vD~dlg~rVa~~l~~ 488 (492)
+||++||++|+++|++
T Consensus 483 ~~d~~~~~~v~~~~~~ 498 (509)
T 2xq1_A 483 KAEPIIGDLIRKKVQE 498 (509)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHhCC
Confidence 9999999999999974
No 13
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=100.00 E-value=2.9e-136 Score=1129.83 Aligned_cols=471 Identities=43% Similarity=0.712 Sum_probs=451.3
Q ss_pred cccccCCccccCCCCccccCC---CCCcccchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCC
Q 042356 16 FFTTNSGAPVWNNNSSMTIGP---RGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRA 92 (492)
Q Consensus 16 ~~t~~~g~p~~~~~~~~~~g~---~g~~~~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~ 92 (492)
.|||++|+||.++++|+|+|. +||+||||++++|||+||+|||||+|++||||+||+|+|+++++++++|+|+||++
T Consensus 19 ~~t~~~g~p~~~~~~s~~~g~~~~~gp~ll~d~~~~ek~~hf~reripeR~vHAKG~ga~G~F~v~~d~~~~t~a~~f~~ 98 (715)
T 1sy7_A 19 RLTTDYGVKQTTADDWLRIVSDDKIGPSLLEDPFARERIMRFDHERIPERVVHARGSGAFGKFKVYESASDLTMAPVLTD 98 (715)
T ss_dssp CCBCTTSCBCSCSSCCCEEECSSCEEEECTTCHHHHHHHHHHHTCCCCCCSSSCSEEEEEEEEEESSCCTTTCCCGGGTC
T ss_pred ccccCCCcccCCCCceeccCCCCCCCchhHHHHHHHHHHhhhccCCCCccccCCCceeEEEEEEECCCchHhhhchhhcC
Confidence 499999999999999999999 99999999999999999999999999999999999999999999999999999998
Q ss_pred CCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEeecCCceeeecccccccccCChhhhHHHHHHhCCCCCCCCCCh---
Q 042356 93 PGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQEN--- 169 (492)
Q Consensus 93 ~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~--- 169 (492)
+||+|||++||||++|+++++|+.||+|||||||||+||||||||||+||||++|+++|++|+|++|++|.|+++++
T Consensus 99 ~Gk~tpv~vRFStv~g~~gs~D~~rd~RGfAvKf~t~eGn~Dlv~nN~PvFfird~~~F~~~i~a~k~~p~t~~~~~~~~ 178 (715)
T 1sy7_A 99 TSRETPVFVRFSTVLGSRGSADTVRDVRGFAVKFYTEEGNWDLVGNNIPVFFIQDAIKFPDVIHAGKPEPHNEVPQAQSA 178 (715)
T ss_dssp SSCCEEEEEEEECSSSCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGGHHHHHHHHSCBTTTTBCTTCCC
T ss_pred CCceEEEEEEeccCCCCCCCCcccCCcCceeEEEecCCCCcceeeeCCCccccCCHHHHHHHHHHcCCCCccCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred -HHHHHHHHhCchhHHHHHHHhcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCc
Q 042356 170 -WRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANH 248 (492)
Q Consensus 170 -~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~ 248 (492)
+++|+|++.+||++|+++|++|++++|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+++||.++.+.++
T Consensus 179 ~~~~~df~~~~Pes~h~~~~~~sdr~~p~s~r~m~~~g~htf~~vn~~G~~~~vk~~~~p~~g~~~l~~~ea~~~~g~~~ 258 (715)
T 1sy7_A 179 HNNFWDFQFNHTEATHMFTWAMSDRAIPRSLRMMQGFGVNTYTLINAQGKRHFVKFHWTPELGVHSLVWDEALKLAGQDP 258 (715)
T ss_dssp SHHHHHHHHHCGGGHHHHHHHTSGGGSBSCGGGSCEECCSCEEEECTTSCEEEEEEEEEETTCCCBCCHHHHHHHHHHCT
T ss_pred hhHHHHHHhhCchhHHHHHHhccCCCCCcccccccccccCCceeEcCCCcEEEEEeeEEcCCCCcCCCHHHHHHhhCCCc
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred hhhHHHHHHHHHcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccc
Q 042356 249 SHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAI 328 (492)
Q Consensus 249 d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~ 328 (492)
|||++||+++|++|++|+|+|+||||+++|+++++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|+|
T Consensus 259 d~l~~dL~~~i~~g~~p~w~l~vQ~~~~~d~~~~~~~~~D~Tk~Wp~~~~P~~~vG~l~Ln~n~~n~f~e~eq~aF~P~~ 338 (715)
T 1sy7_A 259 DFHRKDLWEAIENGAYPKWKFGIQAIAEEDEHKFDFDILDATKIWPEDLVPVRYIGEMELNRNPDEFFPQTEQIAFCTSH 338 (715)
T ss_dssp THHHHHHHHHHHTTCCCEEEEEEEEEEGGGTTCSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTC
T ss_pred cHHHHHHHHHHhcCCCceEEEEEEeeChHHhccCCCCCCcCCccCCccCCCceEeEEEEEcCCcccchhhhhhhhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCchhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCCCCCCccCCceeecCCCCCCcccCCCCCCCcc---C-C
Q 042356 329 VVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRH---A-E 404 (492)
Q Consensus 329 ~~~Gi~ps~d~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pns~~~~~~---~-~ 404 (492)
+||||++|+|||||+|+|+|+|||++|+|+||+|||||||+|+++||||||+|++.++++.|||+||+...... . .
T Consensus 339 ~vpGI~~S~DplLq~R~fsY~ds~~~Rlg~n~~~lpvn~P~~~~~~~~rdg~~~~~~~~~~~~y~pn~~~~~~~~~~~~~ 418 (715)
T 1sy7_A 339 VVNGIGFSDDPLLQGRNFSYFDTQISRLGVNFQELPINRPVCPVMNFNRDGAMRHTISRGTVNYYPNRFDACPPASLKEG 418 (715)
T ss_dssp CCTTEECCCCTTHHHHHHHHHHTHHHHTCTTGGGSTTTCCSSCCCCCCCCCTTCCCCCCSSCCSSSCTTCCSCCCCTTTT
T ss_pred cCCCcCCCCChHHHHHhHHHHHHHhhhcCCChhhccccCCCccccccchhhhhccccCCCCcccccCCCcccCccccccC
Confidence 99999999999999999999999999999999999999999999999999999999888899999996422111 1 1
Q ss_pred CCCCCCcccccceeeeccCC-CCCccccchhccCCCHHHHHHHHHHHHHhcCCCCCC-HHHHHHHHHHHHhhCHHHHHHH
Q 042356 405 MHPTPPEICGGRREKCIIPK-ENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVT-HEIRHIWISYWSQACKSLGQKL 482 (492)
Q Consensus 405 ~~~~~~~~~~G~~~~~~~~~-~ddf~Qpr~fy~~l~~~ek~~Li~Nia~~L~~~~v~-~~I~~r~l~~f~~vD~dlg~rV 482 (492)
.|..++..++|.+.++.+.+ +|||+|||+||++|++.||+|||+||+++|+ +|+ ++||+||+++|++||++||++|
T Consensus 419 ~~~~~~~~~~g~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~~~~~~~~~~d~~~~~~v 496 (715)
T 1sy7_A 419 GYLEYAQKVAGIKARARSAKFKEHFSQAQLFYNSMSPIEKQHMINAFGFELD--HCEDPVVYGRMVQRLADIDLGLAQTI 496 (715)
T ss_dssp CCCCCCCCCCSCCCSCCCGGGGCCSHHHHHHHHHSCHHHHHHHHHHHHHHHH--TCCCHHHHHHHHHHHTTTCHHHHHHH
T ss_pred CccCCCccccccEEEeccCCccchhhhHHHHHHcCCHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHhcCHHHHHHH
Confidence 45556667899888877654 6999999999999999999999999999999 676 8999999999999999999999
Q ss_pred HHHhCC
Q 042356 483 ASRLNV 488 (492)
Q Consensus 483 a~~l~~ 488 (492)
+++|++
T Consensus 497 ~~~~~~ 502 (715)
T 1sy7_A 497 AEMVGG 502 (715)
T ss_dssp HHHHCS
T ss_pred HHHhCC
Confidence 999986
No 14
>3e4w_A Putative uncharacterized protein; heme enzyme, catalase, peroxidase, oxidoreductase; HET: HEM; 1.80A {Mycobacterium avium subsp} PDB: 3e4y_A*
Probab=100.00 E-value=1.5e-97 Score=753.46 Aligned_cols=301 Identities=23% Similarity=0.404 Sum_probs=292.3
Q ss_pred cchHHHHHHHhcCCCCCCCcccCCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCc
Q 042356 42 LEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRG 121 (492)
Q Consensus 42 ~~d~~~~~~l~~~~re~~~~R~~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG 121 (492)
|+|.+|||+|++|+||++++|++||||+||+|+|+|+++++++|+|++|+ ||+|||++||||++|+++++|+.||+||
T Consensus 12 ~~~~~lid~l~~~~~e~~~~R~vHAKG~~a~G~F~v~~d~~~~t~a~~f~--g~~tpv~vRFSt~~g~~g~~D~~rd~RG 89 (320)
T 3e4w_A 12 LTPDQAIDAIRGTGGAQPGCRALHAKGTLYRGTFTATRDAVMLSAAPHLD--GSTVPALIRFSNGSGNPKQRDGAPGVRG 89 (320)
T ss_dssp CCHHHHHHHHHHTTCCCTTSCSSSCSEEEEEEEEEECTTGGGTCCCGGGS--SCEEEEEEEEEESSSCTTCCTTSSCCEE
T ss_pred CCHHHHHHHHHHhcCCCCCCccCCCCeeeEEEEEEECCCchHHHhccccC--CceeEEEEEeccCCCCCCCCccCCCCCc
Confidence 89999999999999999999999999999999999999999999999994 8899999999999999999999999999
Q ss_pred eeEEEeecCCc-eeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHHHHHHHhcCCCCCCCcC
Q 042356 122 FAVKFYTREGN-FDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYR 200 (492)
Q Consensus 122 ~AiKf~~~eG~-~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~~p~s~~ 200 (492)
||||||++||+ |||||||+||||++||++|++|+|++|++ +++++++|+|++.+||++|+++|+|+++++|.||+
T Consensus 90 fAvKf~t~eG~~~Dlv~nN~PvFfird~~~F~~~i~a~k~~----~~d~~~~~df~~~~Pes~h~~~~l~s~rg~p~s~~ 165 (320)
T 3e4w_A 90 MAVKFTLPDGSTTDVSAQTARLLVSSTPEGFIDLLKAMRPG----LTTPLRLATHLLTHPRLLGALPLLREANRIPASYA 165 (320)
T ss_dssp EEEEEECTTSCEEEEEEESCSSCSCSSHHHHHHHHHHTSSS----TTHHHHHHHHHHHCHHHHTTHHHHHHHTCEESCGG
T ss_pred eEEEEEcCCCCeEeeeeccccceecCCHHHHhHHHHhhCCC----CCCHHHHHHHHHhCHhHHHHHHHHhccCCCCCCcc
Confidence 99999999996 99999999999999999999999999975 78899999999999999999999999999999999
Q ss_pred CCCCcccceeeeEecCCCEEEEEEEEEeCCCCCCCCHHHHHHhcCCCchhhHHHHHHHHHcCCCceEEEEEEEeCCCcCC
Q 042356 201 HMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHED 280 (492)
Q Consensus 201 ~~~y~s~~tf~~~n~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~~~~~d~l~~dL~~~i~~g~~~~~~l~vQl~~~~d~~ 280 (492)
+|+|||+|||+|+|++|+.+||||||+|.+|+++|+++|+. +.++|||++||+++|++|++ +|+|+||||+++|.
T Consensus 166 ~~~~~s~htf~~~n~~G~~~~vK~~~~p~~g~~~l~~~ea~---~~~pd~l~~dL~~~i~~g~~-~w~l~vQ~~~~~d~- 240 (320)
T 3e4w_A 166 TTEYHGLHAFRWIAADGSARFVRYHLVPTAAEEYLSASDAR---GKDPDFLTDELAARLQDGPV-RFDFRVQIAGPTDS- 240 (320)
T ss_dssp GSCEEEEEEEEEECTTSCEEEEEEEEEESSCCCEECHHHHH---TSCTTHHHHHHHHHHHHSCE-EEEEEEEECCTTCC-
T ss_pred cCCccccccEEEEcCCCCEEEEEEEEEeCCCCCCCCHHHhc---cCCccHHHHHHHHHHHhCCc-cEEEEEEecCCCCc-
Confidence 99999999999999999999999999999999999999886 46899999999999999995 99999999998774
Q ss_pred CCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccccCCchhhhhhhhhhHHHHHhhcCCCC
Q 042356 281 KFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNY 360 (492)
Q Consensus 281 ~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps~d~ilq~R~~aY~~s~~~R~g~N~ 360 (492)
|+|+||+|||+ |+++||+|+||+|++|+|++|||++|+|||++|||+||+|||||+|++||++|+++|+|.|-
T Consensus 241 -----~~D~Tk~Wpe~--P~~~VG~l~Ln~n~~n~f~e~Eq~aF~P~~~vpGi~ps~D~llq~R~~aY~ds~r~Rlg~n~ 313 (320)
T 3e4w_A 241 -----TVDPSSAWQST--QIVTVGTVTITGPDTEREHGGDIVVFDPMRVTDGIEPSDDPVLRFRTLVYSASVKLRTGVDR 313 (320)
T ss_dssp -----SSCTTSCCCCC--CEEEEEEEEEEEECCSSSSTTCCCCCCTTCCCTTEEECSCHHHHHHHHHHHHHHHHHHSCCC
T ss_pred -----CCCCCCccCCC--CCEEeEEEEECCCCccchhcccceeeeccccCCccCCCCChHHHhHhHHHHHHHHhhcCCCC
Confidence 78999999998 99999999999999999999999999999999999999999999999999999999999994
No 15
>1u5u_A Allene oxide synthase-lipoxygenase protein; catalase, heme, eicosanoid, fusion PR lyase; HET: HEM; 2.00A {Plexaura homomalla} SCOP: e.5.1.2
Probab=100.00 E-value=3.4e-84 Score=667.67 Aligned_cols=301 Identities=18% Similarity=0.239 Sum_probs=275.5
Q ss_pred CCcccchHHHHHHHhcCCCCCCCc-cc-CCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCC
Q 042356 38 GPILLEDYHLVEKLANFDRERIPE-RV-VHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPET 115 (492)
Q Consensus 38 g~~~~~d~~~~~~l~~~~re~~~~-R~-~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~ 115 (492)
|-.|.+|.+++|+|++|++ ++++ |+ +||||+||+|+|+|+++ +++++|+||+ +||+|||++||||+ +++|+
T Consensus 39 ~~~l~~~~~lv~~l~~~~~-~~p~~R~~vHAKG~ga~G~F~v~~d-~~~t~a~~F~-~gk~tpv~vRFSt~----gs~D~ 111 (374)
T 1u5u_A 39 GLKLKLKKEKFKTLFTLGT-TLKGFRRATHTVGTGGIGEITIVND-PKFPEHEFFT-AGRTFPARLRHANL----KYPDD 111 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHTTTSCSSSCSEEEEEEEEEECSS-CCSCCCSSSC-TTCEEEEEEEEEBS----SCSCT
T ss_pred cceeccHHHHHHHHHHhcC-CCCCccccCCCCeeeEEEEEEECCC-chhhcccccC-CCCeeeEEEEecCC----CCCCC
Confidence 4568899999999999999 6777 99 99999999999999999 9999999996 69999999999999 67888
Q ss_pred C-CCCCceeEEEeec--CCceeeeccc---ccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHHHHHHH
Q 042356 116 L-RDPRGFAVKFYTR--EGNFDLVGNN---FPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 189 (492)
Q Consensus 116 ~-~d~RG~AiKf~~~--eG~~Dlv~~n---~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~~Pes~~~~~~l 189 (492)
. +|+||||||||++ +|+||||||| +||||++|+++| + ++++ ++++|+|++.+||+.|++ +
T Consensus 112 ~~rd~RGfAvKf~t~d~~g~~Dlv~nNg~~~PvFfird~~~F---i-a~k~--------p~~~~df~~~~Pes~~~~--l 177 (374)
T 1u5u_A 112 AGADARSFSIKFADSDSDGPLDIVMNTGEANIFWNSPSLEDF---V-PVEE--------GDAAEEYVYKNPYYYYNL--V 177 (374)
T ss_dssp TSEECBEEEEESSSSSSCCSCEEEEEESSSCSCCSHHHHHHH---T-TCCT--------THHHHHHHTTCHHHHHHH--H
T ss_pred CCCCCCeEEEEEEecCCCCceEEEeecCCcccceecCCHHHH---H-hcCC--------hHHHHHHHhhCHHHHHHH--H
Confidence 7 9999999999999 7899999999 999999999999 3 6654 579999999999998876 7
Q ss_pred hcCCCCCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeC-----CCCC--CCCHHHHH--------HhcCCCchhhHHH
Q 042356 190 FDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPT-----CGVK--CLLEDEAI--------KVGGANHSHATQD 254 (492)
Q Consensus 190 ~s~~~~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~-----~g~~--~l~~~ea~--------~~~~~~~d~l~~d 254 (492)
+++|++|.||++|+|||+|||+|+|++|+.+||||||+|. +|++ +|+.+|+. ++.+.++|||++|
T Consensus 178 ~s~r~~P~s~~~~~y~s~htf~~vn~~G~~~~vK~~~~P~~~~~~~g~~~~~l~~ee~~~~~~~~r~~~~~~~~d~l~~d 257 (374)
T 1u5u_A 178 EALRRAPDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLTEEEQRKIWIFSRHENEKRPDDYLRKE 257 (374)
T ss_dssp HHCEESCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEESSSCCCGGGCTTCCCHHHHTTTTCCSCCTTCCSCTTHHHHH
T ss_pred hCcCCCCCCcccCCccccceEEEECCCCCEEEEEEEEEeCCcccccCcccCCCCHHHHhhccccccccccCCCccHHHHH
Confidence 8999999999999999999999999999999999999999 7875 99998876 3567899999999
Q ss_pred HHHHHHcCCCceEEEEEEEeC--CCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCc
Q 042356 255 LYDSIAAGNYPEWKLYIQIMD--PDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPG 332 (492)
Q Consensus 255 L~~~i~~g~~~~~~l~vQl~~--~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~G 332 (492)
|+++|++|+ |+|+|+||||+ ++|+ +||+|+||+|||+++|+++||+|+||+|+++. +|||++|+|||++||
T Consensus 258 L~~~I~~g~-~~w~l~vQl~~~~~~d~----~~~~D~Tk~Wpe~~~P~i~VG~l~Ln~~~p~~--e~EqlaF~P~~~vpG 330 (374)
T 1u5u_A 258 YVERLQKGP-VNYRLQIQIHEASPDDT----ATIFHAGILWDKETHPWFDLAKVSIKTPLSPD--VLEKTAFNIANQPAS 330 (374)
T ss_dssp HHHHHHHSC-EEEEEEEEEEECCTTCC----GGGGCTTSCCCTTTSCCEEEEEEEEEEECCHH--HHHHCCCCTTCCCTT
T ss_pred HHHHHHcCC-ceEEEEEEEecCCcccc----cCcccCceeCCcccCCcEEEEEEEECCCCCch--hhhHhhcCccccCCC
Confidence 999999999 89999999999 6554 35899999999999999999999999995543 799999999999999
Q ss_pred cccC-----Cc--hhhhhhhhhhHHHHHhhcCCCCCCCCCC
Q 042356 333 IYYS-----ND--KLLQTRIFSYADTQRHRLGPNYLQLPVN 366 (492)
Q Consensus 333 i~ps-----~d--~ilq~R~~aY~~s~~~R~g~N~~qlPvN 366 (492)
|+|| +| ||||+|++||++|+++|+|.|+.|||.-
T Consensus 331 i~~s~pSs~~D~~~llq~R~~aY~ds~~~R~g~n~~~~~~~ 371 (374)
T 1u5u_A 331 LGLLEAKSPEDYNSIGELRVAVYTWVQHLRKLKIGSLVPAG 371 (374)
T ss_dssp SCCCCCSSSSSTTHHHHHHHHHHHHHHHHHHHTTTCCC---
T ss_pred ccccccccCCCcchHHHHHHHHHHHHHHhhcccchhccCCc
Confidence 9555 99 9999999999999999999999999864
No 16
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}
Probab=100.00 E-value=4e-75 Score=664.81 Aligned_cols=312 Identities=17% Similarity=0.203 Sum_probs=281.0
Q ss_pred CCcccchHHHHHHHhcCCCCCCCccc-CCCCceeEEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCC
Q 042356 38 GPILLEDYHLVEKLANFDRERIPERV-VHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETL 116 (492)
Q Consensus 38 g~~~~~d~~~~~~l~~~~re~~~~R~-~HAKG~ga~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~ 116 (492)
|.+++++.++++.+.++++.+++.|+ +||||+||+|+|+|++++ ++++|++|+. ||+|||++||||++| .+|+.
T Consensus 39 ~~~l~~~~~~~~~~~~~~g~~~g~Rr~vHAKG~ga~G~F~v~~d~-~~t~a~~F~~-gk~tpv~vRFStv~~---~Dd~~ 113 (1066)
T 3dy5_A 39 GLKLKLKKEKFKTLFTLGTTLKGFRRATHTVGTGGIGEITIVNDP-KFPEHEFFTA-GRTFPARLRHANLKY---PDDAG 113 (1066)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSCSSSCSBCCEEEEEEECSSC-CSCCCSSSCT-TCCEEEEEECBBSSC---SCTTS
T ss_pred chhHHHHHHHHhhhhhhcCCCCCccccccCCeeeEEEEEEECCCH-HHHhhhhhcC-CCEEEEEEEcCCCCC---CCCCC
Confidence 56789999999999999999999885 999999999999999999 9999999985 999999999999864 34567
Q ss_pred CCCCceeEEEeecC--CceeeecccccccccCChhhhHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHHHHHHHhcCCC
Q 042356 117 RDPRGFAVKFYTRE--GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVG 194 (492)
Q Consensus 117 ~d~RG~AiKf~~~e--G~~Dlv~~n~PvFf~~d~~~F~~~~~a~~~~p~t~~~~~~~~~~f~~~~Pes~~~~~~l~s~~~ 194 (492)
||+|||||||||+| |||||||||+||||+|||++|++|+|++++ +++|+|++.|||+ +++|++++++
T Consensus 114 rd~RGfAvKf~t~e~Ggn~DlV~nN~PvFfird~~~F~~fi~a~kp---------~~~~df~~~~Pes--~~~~l~sdr~ 182 (1066)
T 3dy5_A 114 ADARSFSIKFADSDSDGPLDIVMNTGEANIFWNSPSLEDFVPVEEG---------DAAEEYVYKNPYY--YYNLVEALRR 182 (1066)
T ss_dssp CCBBEEEEESSSSSSCCSCEEEEESSSSCSCCSHHHHHTTTTCCTT---------HHHHHHHTSSHHH--HHTHHHHBCS
T ss_pred CCCceEEEEEEeCCCCceeeeeeccCCccccCCHHHHHHHHHhcCc---------hHHHHHHhhCcHH--HHHHHhccCC
Confidence 99999999999999 599999999999999999999999999862 6899999999999 7899999999
Q ss_pred CCCCcCCCCCcccceeeeEecCCCEEEEEEEEEeC------CCCC-CCCHHHHH--------HhcCCCchhhHHHHHHHH
Q 042356 195 VPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPT------CGVK-CLLEDEAI--------KVGGANHSHATQDLYDSI 259 (492)
Q Consensus 195 ~p~s~~~~~y~s~~tf~~~n~~G~~~~vK~~~~P~------~g~~-~l~~~ea~--------~~~~~~~d~l~~dL~~~i 259 (492)
+|+||++|+|||+|||+|+|++|+.+||||||+|. +|++ +|+.+|+. ++.+.++|||++||+++|
T Consensus 183 ~P~s~~~m~~~s~htf~~~n~~G~~~~VKf~~~P~~~~~~~~G~~~~l~~ee~~~~~~~~r~~~~~~~pd~l~~dL~~~i 262 (1066)
T 3dy5_A 183 APDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLTEEEQRKIWIFSRHENEKRPDDYLRKEYVERL 262 (1066)
T ss_dssp SCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEECSSCCCGGGCTTCCCHHHHHTCSCCSCCSSCCCCTTTTTTTTTTTT
T ss_pred CCCCcccCCcccccceEEEcCCCCEEEEEEEEEECCccccccccccCCCHHHHhhccccccccccCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999994 5788 79988875 466789999999999999
Q ss_pred HcCCCceEEEEEEEeCCCcCCCCCCCCCCCccccCCCCCCceeeEEEEeCCCCcchhhhcccccccccccCCccccCCc-
Q 042356 260 AAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSND- 338 (492)
Q Consensus 260 ~~g~~~~~~l~vQl~~~~d~~~~~~~i~D~Tk~Wpe~~~P~~~vG~l~l~~~~~n~~~~~e~laF~P~~~~~Gi~ps~d- 338 (492)
++|+ |+|+|+||||++++.+ ++||+|+||+|||+++|+++||+|+||+|++| ++|||++|+|||+||||++|+|
T Consensus 263 ~~g~-p~w~l~vQl~~~~~~d--~~d~~D~Tk~Wp~~~~P~i~VG~l~Lnrn~~n--ae~Eq~aF~P~~~vpGi~~s~dk 337 (1066)
T 3dy5_A 263 QKGP-VNYRLQIQIHEASPDD--TATIFHAGILWDKETHPWFDLAKVSIKTPLSP--DVLEKTAFNIANQPASLGLLEAK 337 (1066)
T ss_dssp TSSC-EEEEEEEEEEECCTTC--CGGGGCTTSCCCGGGSCCEEEEEEEEEEECCH--HHHTTCCCCTTCCCTTSCCCCCS
T ss_pred HcCC-ceEEEEEEEecCCcCC--CCCCCCCCeECCcccCceEEEEEEEECCCCCc--chhhhhccCccccCCCccCCCcc
Confidence 9999 8999999999844443 35689999999999999999999999999998 7899999999999999999964
Q ss_pred ------hhhhhhhhhhHHHHHhhcCCCCCCCCCCCCCCC
Q 042356 339 ------KLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCA 371 (492)
Q Consensus 339 ------~ilq~R~~aY~~s~~~R~g~N~~qlPvN~p~~~ 371 (492)
+|+++|+.+|+.|+++|+..+. .||...+.|.
T Consensus 338 s~~plgsI~raR~~vY~~s~~~R~~~~g-~l~~~~~~~~ 375 (1066)
T 3dy5_A 338 SPEDYNSIGELRVAVYTWVQHLRKLKIG-SLVPAGQNAI 375 (1066)
T ss_dssp STTSTTHHHHHHHHHHHHHHHHHHHTSS-CC-----CCE
T ss_pred ccCCccHHHHHHHHHHHHHHHhhhcccc-cCCcccCcee
Confidence 4999999999999999987664 5666555554
No 17
>3eyi_A Z-DNA-binding protein 1; alternative splicing, DNA-binding, polymorphism, DNA binding protein/Z-DNA complex, DNA binding protein/DNA complex; 1.45A {Homo sapiens} PDB: 2l4m_A
Probab=30.98 E-value=25 Score=27.10 Aligned_cols=37 Identities=11% Similarity=0.203 Sum_probs=27.2
Q ss_pred hcCCCCCCHHHHHHHHHHHHhhCHHHHHHHHHHhCCC
Q 042356 453 ALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVR 489 (492)
Q Consensus 453 ~L~~~~v~~~I~~r~l~~f~~vD~dlg~rVa~~l~~~ 489 (492)
||++|+.++.-+++++.++..--|.-|--||++||++
T Consensus 1 ~~~g~qls~~~ee~I~~fL~~~Gp~~AL~IAK~LGlk 37 (72)
T 3eyi_A 1 HMASPQFSQQREEDIYRFLKDNGPQRALVIAQALGMR 37 (72)
T ss_dssp ---CCCCSSHHHHHHHHHHHHHCSEEHHHHHHHTTCC
T ss_pred CCcchhhhhhhHHHHHHHHHHcCCchHHHHHHHhCcc
Confidence 3555666655578899999888888888899999875
No 18
>1l6x_B Minimized B-domain of protein A Z34C; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: k.13.1.1 PDB: 1oqo_C* 1oqx_C* 1zdc_A 1zdd_A
Probab=21.23 E-value=43 Score=22.06 Aligned_cols=24 Identities=13% Similarity=0.104 Sum_probs=18.4
Q ss_pred cccchhcc-----CCCHHHHHHHHHHHHH
Q 042356 429 KQPGERYR-----SWAPDRQERFICRWVD 452 (492)
Q Consensus 429 ~Qpr~fy~-----~l~~~ek~~Li~Nia~ 452 (492)
.|-.+||+ .|++++|+..|+.|-.
T Consensus 4 ~qQnaFYevLh~~nLtEeQrn~yI~slkd 32 (34)
T 1l6x_B 4 QCQRRFYEALHDPNLNEEQRNAKIKSIRD 32 (34)
T ss_dssp HHHHHHHHHHHCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHhHHHHHhc
Confidence 35678886 3789999999988754
Done!