BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042358
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P82278|RR9_SPIOL 30S ribosomal protein S9, chloroplastic (Fragment) OS=Spinacia
oleracea GN=PRPS9 PE=1 SV=1
Length = 197
Score = 226 bits (577), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/163 (71%), Positives = 134/163 (82%), Gaps = 5/163 (3%)
Query: 26 LSSLSFSSQISQKPGIPFVSLHRSKSISISPKNDKTPKLVVSATEA-APAEL-ETTDLKK 83
+SLSF+S ++ KP + + R+K S+S P LV++AT A AP E+ ET DL+K
Sbjct: 1 FASLSFTSNLTPKPQT--LPMARTKPFSLSNPAVVKP-LVITATSATAPVEVAETADLEK 57
Query: 84 YVKSRLPGGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKV 143
+VKSRLPGGFAAQT+ GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQY+K
Sbjct: 58 FVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKT 117
Query: 144 PLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKFCTS 186
PL TLGYET+YDVFVKAHGGGLSGQAQAI+LGVARALLK S
Sbjct: 118 PLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSAS 160
>sp|Q9XJ27|RR9_ARATH 30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana
GN=RPS9 PE=2 SV=1
Length = 208
Score = 216 bits (551), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/141 (76%), Positives = 119/141 (84%), Gaps = 2/141 (1%)
Query: 44 VSLHRSKSISISP-KNDKTPKLVVSATEAAP-AELETTDLKKYVKSRLPGGFAAQTIFGT 101
+S R+ S+ P K+ + L ++AT +AP E E +LKKYVKSRLPGGFAAQ I GT
Sbjct: 27 ISFPRANSVFALPAKSARRASLSITATVSAPPEEEEIVELKKYVKSRLPGGFAAQKIIGT 86
Query: 102 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAH 161
GRRKCAIARVVLQEGTGK IINYRDAKEYLQGNPLWLQY+KVPLVTLGYE SYD+FVKAH
Sbjct: 87 GRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYENSYDIFVKAH 146
Query: 162 GGGLSGQAQAITLGVARALLK 182
GGGLSGQAQAITLGVARALLK
Sbjct: 147 GGGLSGQAQAITLGVARALLK 167
>sp|Q8DMK7|RS9_THEEB 30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rpsI PE=3 SV=1
Length = 137
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 62/85 (72%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
GTGRRK A+ARV L G+G+ IN R+ +YLQ NP++L +K PL TLG E SYD++V
Sbjct: 13 LGTGRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYV 72
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
A GGGL+GQA AI LG+ARAL +
Sbjct: 73 NATGGGLTGQADAIRLGIARALCQL 97
>sp|B2ITM7|RS9_NOSP7 30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=rpsI PE=3 SV=1
Length = 138
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 59/85 (69%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK A+ARV L GTG+ +N +D Y Q NP +L IK PL TLG E YD+ V
Sbjct: 14 WGTGRRKNAVARVRLVPGTGQLTVNGKDGNLYFQFNPNYLGVIKAPLETLGLENEYDILV 73
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
KA GGGL+GQA ++ LGVARAL +
Sbjct: 74 KAEGGGLTGQADSVRLGVARALCQL 98
>sp|Q2JUJ9|RS9_SYNJA 30S ribosomal protein S9 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rpsI PE=3 SV=1
Length = 137
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 57/82 (69%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK A+ARV L GTGK IIN R +YLQ L +K PL LG E SYD+ V
Sbjct: 13 WGTGRRKTAVARVRLVPGTGKLIINDRPGDQYLQYQEALLASVKAPLELLGLENSYDILV 72
Query: 159 KAHGGGLSGQAQAITLGVARAL 180
+AHGGG+ GQA AI LGVARAL
Sbjct: 73 RAHGGGVHGQADAIKLGVARAL 94
>sp|B1XJI0|RS9_SYNP2 30S ribosomal protein S9 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rpsI PE=3 SV=1
Length = 137
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK +IARV L G+GK ++N R ++Y P +L +K PL TLG E+ YD+ V
Sbjct: 13 WGTGRRKASIARVRLVPGSGKVVVNNRSGEDYFNRIPGYLAVLKSPLETLGLESEYDILV 72
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
AHGGGL+GQA A+ LGVARAL +
Sbjct: 73 NAHGGGLTGQADAVKLGVARALCEL 97
>sp|Q2JL70|RS9_SYNJB 30S ribosomal protein S9 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rpsI PE=3 SV=1
Length = 136
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 57/82 (69%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK A+ARV L GTGK IIN R +YLQ L +K PL LG E SYD+ V
Sbjct: 12 WGTGRRKTAVARVRLVPGTGKIIINDRPGDQYLQYQEALLASVKGPLEILGLENSYDILV 71
Query: 159 KAHGGGLSGQAQAITLGVARAL 180
+AHGGG+ GQA AI LGVARAL
Sbjct: 72 RAHGGGVHGQADAIKLGVARAL 93
>sp|B1WQT9|RS9_CYAA5 30S ribosomal protein S9 OS=Cyanothece sp. (strain ATCC 51142)
GN=rpsI PE=3 SV=1
Length = 137
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 58/86 (67%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK A+ARV L G+G+ I+N + Y P +LQ IK PL TLG E YD+ V
Sbjct: 13 WGTGRRKSAVARVRLVPGSGEIIVNKKPGNIYFNRIPDYLQAIKGPLETLGLENDYDILV 72
Query: 159 KAHGGGLSGQAQAITLGVARALLKFC 184
AHGGGL+GQA A+ LGVARAL +
Sbjct: 73 NAHGGGLTGQADAVKLGVARALCELA 98
>sp|B0JY34|RS9_MICAN 30S ribosomal protein S9 OS=Microcystis aeruginosa (strain
NIES-843) GN=rpsI PE=3 SV=1
Length = 137
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK A+A V L GTG +N RD + + P ++Q IK PL TLG E YD+ V
Sbjct: 13 WGTGRRKSAVAAVRLVPGTGAITVNGRDGETHFNRIPTYIQTIKAPLETLGLENEYDIIV 72
Query: 159 KAHGGGLSGQAQAITLGVARALLKFC 184
KA GGGL+GQA A+ LGVARAL +
Sbjct: 73 KAEGGGLTGQADAVKLGVARALCQLA 98
>sp|Q8YPK7|RS9_NOSS1 30S ribosomal protein S9 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rpsI PE=3 SV=1
Length = 138
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 58/85 (68%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK A+ARV L GTG+ I+N + Y Q N +L IK PL TLG E YD+ V
Sbjct: 14 WGTGRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLENEYDILV 73
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
KA GGGL+GQA ++ LGVARAL +
Sbjct: 74 KAEGGGLTGQADSVRLGVARALCQL 98
>sp|Q3MF93|RS9_ANAVT 30S ribosomal protein S9 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rpsI PE=3 SV=1
Length = 138
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 58/85 (68%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK A+ARV L GTG+ I+N + Y Q N +L IK PL TLG E YD+ V
Sbjct: 14 WGTGRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLENEYDILV 73
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
KA GGGL+GQA ++ LGVARAL +
Sbjct: 74 KAEGGGLTGQADSVRLGVARALCQL 98
>sp|Q318L1|RS9_PROM9 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT
9312) GN=rpsI PE=3 SV=1
Length = 136
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 55/85 (64%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G+ IN R +YL NPL L IK PL TLG E SYD+ V
Sbjct: 12 WGTGRRKTSVARVRLIPGNGQIKINGRSGDDYLNFNPLHLNSIKAPLQTLGLENSYDILV 71
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
GGGL+GQA AI G ARAL +
Sbjct: 72 NVFGGGLTGQADAIKQGAARALCEL 96
>sp|Q9MUV1|RR9_MESVI 30S ribosomal protein S9, chloroplastic OS=Mesostigma viride
GN=rps9 PE=3 SV=1
Length = 137
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 59/88 (67%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
GTGRRK A+ARV L G G+ IIN YLQ N +L ++ PL TLG E +YD+ V
Sbjct: 13 LGTGRRKSAVARVRLVPGNGEVIINGLPGTNYLQFNGSYLSAVRSPLETLGLEDNYDIIV 72
Query: 159 KAHGGGLSGQAQAITLGVARALLKFCTS 186
KA GGGL+GQA+AI LGVARAL TS
Sbjct: 73 KAVGGGLTGQAEAIRLGVARALCTIDTS 100
>sp|Q7UZW9|RS9_PROMP 30S ribosomal protein S9 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=rpsI PE=3 SV=1
Length = 136
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 55/82 (67%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G+ IN R +YL NP L +K PL+TLG E SYD+FV
Sbjct: 12 WGTGRRKTSVARVRLIPGNGQIKINGRSGDDYLNFNPSHLNSVKAPLLTLGLENSYDIFV 71
Query: 159 KAHGGGLSGQAQAITLGVARAL 180
GGGL+GQA AI G ARAL
Sbjct: 72 NVFGGGLTGQADAIKQGAARAL 93
>sp|A9BCM0|RS9_PROM4 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT
9211) GN=rpsI PE=3 SV=1
Length = 137
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 55/85 (64%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L GTGK IN R YL NP +L +K PL TLG SYDV V
Sbjct: 13 WGTGRRKTSVARVRLIPGTGKITINGRPGDHYLNFNPAYLAAVKAPLQTLGLSDSYDVLV 72
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
+GGGL+GQA AI G ARAL +
Sbjct: 73 NVYGGGLTGQADAIKQGAARALCEL 97
>sp|A2BYQ9|RS9_PROM5 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT
9515) GN=rpsI PE=3 SV=1
Length = 136
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 54/82 (65%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G+ IN R +YL NP L +K PL TLG E SYD+FV
Sbjct: 12 WGTGRRKTSVARVRLIPGNGQIKINGRSGDDYLNFNPSHLNSVKAPLQTLGLENSYDIFV 71
Query: 159 KAHGGGLSGQAQAITLGVARAL 180
GGGL+GQA AI G ARAL
Sbjct: 72 NVFGGGLTGQADAIKQGAARAL 93
>sp|A2CC55|RS9_PROM3 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT
9303) GN=rpsI PE=3 SV=1
Length = 135
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 53/85 (62%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L GTG IN R YL NP +L +K PL TLG YDV V
Sbjct: 11 WGTGRRKTSVARVRLVPGTGTITINGRPGDHYLNFNPAYLAAVKAPLQTLGLNEQYDVLV 70
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
HGGGL+GQA AI G ARAL +
Sbjct: 71 NVHGGGLTGQADAIKQGAARALCEL 95
>sp|B8HNG6|RS9_CYAP4 30S ribosomal protein S9 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=rpsI PE=3 SV=1
Length = 137
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%)
Query: 97 TIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDV 156
T GTGRRK ++ARV L GTG+ IN + + YLQ NP +L K PL +LG E YD+
Sbjct: 11 TYIGTGRRKSSVARVRLVPGTGQLTINGKSGELYLQFNPTYLAIAKAPLESLGLENDYDI 70
Query: 157 FVKAHGGGLSGQAQAITLGVARALLKF 183
V GGGL+GQA +I LGVARAL +
Sbjct: 71 LVNTSGGGLTGQADSIRLGVARALCQL 97
>sp|B7KI15|RS9_CYAP7 30S ribosomal protein S9 OS=Cyanothece sp. (strain PCC 7424)
GN=rpsI PE=3 SV=1
Length = 137
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L GTG+ +N + Y +LQ IK PL TLG E YD+ V
Sbjct: 13 WGTGRRKTSVARVRLIPGTGQVTVNGKPGDTYFNRIADYLQGIKAPLETLGLENEYDILV 72
Query: 159 KAHGGGLSGQAQAITLGVARALLKFC 184
KAHGGGL+GQA A+ LGVARAL +
Sbjct: 73 KAHGGGLTGQADAVKLGVARALCELA 98
>sp|A2BTB1|RS9_PROMS 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain AS9601)
GN=rpsI PE=3 SV=1
Length = 136
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 54/85 (63%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G IN R +YL NPL L IK PL TLG E SYD+ V
Sbjct: 12 WGTGRRKTSVARVRLIPGNGLIKINGRSGDDYLNFNPLHLNSIKAPLQTLGLENSYDILV 71
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
GGGL+GQA AI G ARAL +
Sbjct: 72 NVFGGGLTGQADAIKQGAARALCEL 96
>sp|A8G735|RS9_PROM2 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT
9215) GN=rpsI PE=3 SV=1
Length = 136
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 54/85 (63%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G IN R +YL NPL L +K PL TLG E SYD+ V
Sbjct: 12 WGTGRRKTSVARVRLIPGNGLITINGRSGDDYLNFNPLHLNSVKAPLQTLGLENSYDILV 71
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
GGGL+GQA AI G ARAL +
Sbjct: 72 NVFGGGLTGQADAIKQGAARALCEL 96
>sp|A3PF21|RS9_PROM0 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT
9301) GN=rpsI PE=3 SV=1
Length = 136
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 55/85 (64%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G IN R +YL NPL L IK PL TLG E SYD++V
Sbjct: 12 WGTGRRKTSVARVRLIPGNGLIKINGRAGDDYLNFNPLHLNSIKAPLQTLGLENSYDMYV 71
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
GGGL+GQA AI G ARAL +
Sbjct: 72 NVFGGGLTGQADAIKQGAARALCEL 96
>sp|Q7V520|RS9_PROMM 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT
9313) GN=rpsI PE=3 SV=1
Length = 135
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 53/85 (62%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G+G IN R YL NP +L +K PL TLG YDV V
Sbjct: 11 WGTGRRKTSVARVRLVPGSGTITINGRPGDHYLNFNPAYLAAVKAPLQTLGLNEQYDVLV 70
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
HGGGL+GQA AI G ARAL +
Sbjct: 71 NVHGGGLTGQADAIKQGAARALCEL 95
>sp|Q3AW66|RS9_SYNS9 30S ribosomal protein S9 OS=Synechococcus sp. (strain CC9902)
GN=rpsI PE=3 SV=1
Length = 133
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 53/85 (62%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G IN R YL NP ++ +K PL TLG T YDV V
Sbjct: 9 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPAYIAAVKAPLETLGLSTEYDVLV 68
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
HGGGL+GQ+ AI G ARAL +
Sbjct: 69 NVHGGGLTGQSGAIKQGAARALCEL 93
>sp|O07828|RS9_PROMA 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rpsI PE=3 SV=2
Length = 136
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 55/85 (64%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L GTGK IN R YL NP +L +K PL TLG +YDV V
Sbjct: 12 WGTGRRKTSVARVRLIPGTGKITINGRPGDHYLNFNPAYLSAVKAPLHTLGLGEAYDVLV 71
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
+GGGL+GQ+ AI G ARAL +
Sbjct: 72 NVYGGGLTGQSDAIKQGAARALCEL 96
>sp|Q0ID32|RS9_SYNS3 30S ribosomal protein S9 OS=Synechococcus sp. (strain CC9311)
GN=rpsI PE=3 SV=1
Length = 135
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 52/85 (61%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G IN R YL NP +L +K PL TLG T YDV V
Sbjct: 11 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPAYLAAVKAPLQTLGLSTEYDVLV 70
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
GGGL+GQA AI G ARAL +
Sbjct: 71 NVRGGGLTGQADAIKQGAARALCEL 95
>sp|B0C426|RS9_ACAM1 30S ribosomal protein S9 OS=Acaryochloris marina (strain MBIC
11017) GN=rpsI PE=3 SV=1
Length = 137
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 54/84 (64%)
Query: 100 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVK 159
GTGRRK +I RV L G+G IN + YLQ NP ++ K PL +LG E YDV V
Sbjct: 14 GTGRRKSSIVRVRLVPGSGVMTINGKPGDLYLQFNPSYIANAKAPLESLGLENDYDVLVN 73
Query: 160 AHGGGLSGQAQAITLGVARALLKF 183
A GGGL+GQA AI LGVARAL +
Sbjct: 74 ARGGGLTGQADAIKLGVARALCEL 97
>sp|Q7U4H4|RS9_SYNPX 30S ribosomal protein S9 OS=Synechococcus sp. (strain WH8102)
GN=rpsI PE=3 SV=1
Length = 133
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 53/85 (62%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G IN R YL NP ++ +K PL TLG T YD+ V
Sbjct: 9 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPAYIAAVKAPLETLGLGTEYDILV 68
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
HGGGL+GQ+ AI G ARAL +
Sbjct: 69 NVHGGGLTGQSGAIKQGAARALCEL 93
>sp|P73293|RS9_SYNY3 30S ribosomal protein S9 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rpsI PE=3 SV=1
Length = 137
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK AIARV L G G+ I+N + + Y ++Q +K PL TLG E Y++ V
Sbjct: 13 WGTGRRKAAIARVRLVPGQGEVIVNGKPGEIYFNRIANYIQSLKAPLETLGLEGEYNILV 72
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
AHGGGL+GQA A+ LGVARAL +
Sbjct: 73 NAHGGGLTGQADAVKLGVARALCQL 97
>sp|C5CDI2|RS9_KOSOT 30S ribosomal protein S9 OS=Kosmotoga olearia (strain TBF 19.5.1)
GN=rpsI PE=3 SV=1
Length = 134
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIIN---YRDAKEYLQGNPLWLQYIKVPLVTLGYETSYD 155
GTGRRK ++ARV L+ G GKFI+N +D KEYL N W+++ P V +D
Sbjct: 8 IGTGRRKTSVARVRLRPGEGKFIVNGKELKDLKEYLH-NDAWVRHALKPAVLTDTLGRFD 66
Query: 156 VFVKAHGGGLSGQAQAITLGVARALLKFCTSVPGIMES 193
+F++ GGGLSGQA AI LG+ARALL+F + +++
Sbjct: 67 IFIRVSGGGLSGQAGAIRLGIARALLQFNEDLKPLLKQ 104
>sp|Q3AMQ7|RS9_SYNSC 30S ribosomal protein S9 OS=Synechococcus sp. (strain CC9605)
GN=rpsI PE=3 SV=1
Length = 133
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 53/85 (62%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G IN R YL NP ++ +K PL TLG + YD+ V
Sbjct: 9 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPSYIAAVKAPLETLGLSSEYDILV 68
Query: 159 KAHGGGLSGQAQAITLGVARALLKF 183
HGGGL+GQ+ AI G ARAL +
Sbjct: 69 NVHGGGLTGQSGAIKQGAARALCEL 93
>sp|Q4A938|RS9_MYCHJ 30S ribosomal protein S9 OS=Mycoplasma hyopneumoniae (strain J /
ATCC 25934 / NCTC 10110) GN=rpsI PE=3 SV=1
Length = 132
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L+ G G+F IN R AKEYL+ + L ++ PL + +++ V
Sbjct: 9 YGTGRRKSSVARVTLKHGNGQFKINNRVAKEYLKSDILIKDALQ-PLSITNTVSEFNIRV 67
Query: 159 KAHGGGLSGQAQAITLGVARALLKFCTSV-PGI 190
AHGGG+SGQA AI LG+ARALLK PG+
Sbjct: 68 NAHGGGISGQAGAIRLGIARALLKVSADYRPGL 100
>sp|Q4A777|RS9_MYCH7 30S ribosomal protein S9 OS=Mycoplasma hyopneumoniae (strain 7448)
GN=rpsI PE=3 SV=1
Length = 132
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L+ G G+F IN R AKEYL+ + L ++ PL + +++ V
Sbjct: 9 YGTGRRKSSVARVTLKHGNGQFKINNRVAKEYLKSDILIKDALQ-PLSITNTVSEFNIRV 67
Query: 159 KAHGGGLSGQAQAITLGVARALLKFCTSV-PGI 190
AHGGG+SGQA AI LG+ARALLK PG+
Sbjct: 68 NAHGGGISGQAGAIRLGIARALLKVSADYRPGL 100
>sp|Q5ZZN6|RS9_MYCH2 30S ribosomal protein S9 OS=Mycoplasma hyopneumoniae (strain 232)
GN=rpsI PE=3 SV=1
Length = 132
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L+ G G+F IN R AKEYL+ + L ++ PL + +++ V
Sbjct: 9 YGTGRRKSSVARVTLKHGNGQFKINNRVAKEYLKSDILIKDALQ-PLSITNTVSEFNIRV 67
Query: 159 KAHGGGLSGQAQAITLGVARALLKFCTSV-PGI 190
AHGGG+SGQA AI LG+ARALLK PG+
Sbjct: 68 NAHGGGISGQAGAIRLGIARALLKVSADYRPGL 100
>sp|Q6B8X6|RR9_GRATL 30S ribosomal protein S9, chloroplastic OS=Gracilaria
tenuistipitata var. liui GN=rps9 PE=3 SV=1
Length = 137
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 56/84 (66%)
Query: 100 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVK 159
GTGRRK +IARV L G+GK IIN + YLQ +P +L+ PL LG YD++VK
Sbjct: 14 GTGRRKTSIARVKLVPGSGKLIINGLPGESYLQFSPNYLRVSYSPLKILGLNKEYDIYVK 73
Query: 160 AHGGGLSGQAQAITLGVARALLKF 183
GGGL+GQA AI LG+ARAL +
Sbjct: 74 TEGGGLTGQANAIRLGLARALCRM 97
>sp|Q1XDJ7|RR9_PORYE 30S ribosomal protein S9, chloroplastic OS=Porphyra yezoensis
GN=rps9 PE=3 SV=1
Length = 137
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%)
Query: 100 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVK 159
GTGRRKC++A+V L G+G IIN + YLQ +P +L+ PL LG YD+ V
Sbjct: 14 GTGRRKCSVAQVRLVPGSGNLIINGIPGESYLQFSPNYLRVSYAPLQVLGLLNQYDIHVN 73
Query: 160 AHGGGLSGQAQAITLGVARAL 180
A GGGL+GQA AI LGVARAL
Sbjct: 74 ARGGGLTGQADAIRLGVARAL 94
>sp|P19459|RR9_GUITH 30S ribosomal protein S9, chloroplastic OS=Guillardia theta GN=rps9
PE=3 SV=2
Length = 134
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 100 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVK 159
GTG RK AIARV L G+G +N + Y Q +P +++ K PL TLG E Y+++V
Sbjct: 11 GTGHRKQAIARVYLTPGSGLIEVNGIKGELYFQYSPNYIRLSKSPLTTLGLENKYNIYVN 70
Query: 160 AHGGGLSGQAQAITLGVARALLKF 183
AHGGGL+GQ +AI LG+ARAL K
Sbjct: 71 AHGGGLTGQVEAIRLGLARALCKL 94
>sp|Q47LM6|RS9_THEFY 30S ribosomal protein S9 OS=Thermobifida fusca (strain YX) GN=rpsI
PE=3 SV=1
Length = 169
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
GTGRRK A+ARV + GTG++ IN + +EY N + Q IK PL TLG+E +YDVF
Sbjct: 45 LGTGRRKTAVARVRVVPGTGEWKINGKSLEEYFP-NKVHQQLIKEPLATLGFEGAYDVFA 103
Query: 159 KAHGGGLSGQAQAITLGVARAL 180
+ +GGG SGQA A+ G+ARAL
Sbjct: 104 RLNGGGTSGQAGALRHGLARAL 125
>sp|P51291|RR9_PORPU 30S ribosomal protein S9, chloroplastic OS=Porphyra purpurea
GN=rps9 PE=3 SV=1
Length = 137
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 54/81 (66%)
Query: 100 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVK 159
GTGRRKC++A+V L G+G +IN + YLQ +P +L+ PL LG YD+ V
Sbjct: 14 GTGRRKCSVAQVRLVPGSGNLVINGIPGESYLQFSPNYLRVSYAPLQVLGLLNQYDIHVN 73
Query: 160 AHGGGLSGQAQAITLGVARAL 180
A GGGL+GQA AI LGVARAL
Sbjct: 74 ARGGGLTGQADAIRLGVARAL 94
>sp|A9BHB5|RS9_PETMO 30S ribosomal protein S9 OS=Petrotoga mobilis (strain DSM 10674 /
SJ95) GN=rpsI PE=3 SV=1
Length = 135
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAK---EYLQGNPLWLQYIKVPLVTLGYETSYD 155
+GTGRRK A+ARV L+ G GK IN ++ K EYL+GN +W PL +D
Sbjct: 8 YGTGRRKTAVARVHLRPGNGKIKINGKEYKSLVEYLRGNEVWEIEALKPLTVTSTNGQFD 67
Query: 156 VFVKAHGGGLSGQAQAITLGVARALLKFCTSVPGIMES 193
+ ++ +GGGLSGQA AI LG+ARALL + S I++
Sbjct: 68 LVIRVNGGGLSGQAGAIRLGIARALLSYDESFRPILKK 105
>sp|P48135|RR9_CYAPA 30S ribosomal protein S9, cyanelle OS=Cyanophora paradoxa GN=rps9
PE=3 SV=1
Length = 134
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 92 GFAAQTI-FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGY 150
G QT+ +GTGRRK ++A+V L G G+ +IN + A YLQ N +L +K PL +LG
Sbjct: 2 GQKEQTLAYGTGRRKTSVAKVRLIPGKGEILINSKPANLYLQYNLSYLAAVKSPLESLGL 61
Query: 151 ETSYDVFVKAHGGGLSGQAQAITLGVARALLKFCTSVPGIMES 193
Y+V V GGGL+GQ++AI LG+ARAL + + +++S
Sbjct: 62 ANEYNVIVNTQGGGLTGQSEAIRLGLARALCQISLTHRPLLKS 104
>sp|Q6YR77|RS9_ONYPE 30S ribosomal protein S9 OS=Onion yellows phytoplasma (strain OY-M)
GN=rpsI PE=3 SV=1
Length = 130
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
FGTGRRK A+ARV+L GTGK IN RD ++YL L+ I+ PL ++DV V
Sbjct: 7 FGTGRRKSAVARVILTNGTGKITINTRDFEKYLPLPATRLEMIQ-PLELTEKREAFDVSV 65
Query: 159 KAHGGGLSGQAQAITLGVARALLKFCTSVPGIME 192
+GGGLS QA AI LG+ARAL++ + I++
Sbjct: 66 NVNGGGLSAQAGAIRLGIARALIESVPELRAILK 99
>sp|A0QKT2|RS9_MYCA1 30S ribosomal protein S9 OS=Mycobacterium avium (strain 104)
GN=rpsI PE=3 SV=1
Length = 166
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 57 KNDKTPKLVVSATEAAPAELETTDLKKYVKSRLPGGFAAQTIFGTGRRKCAIARVVLQEG 116
+N P +A E A +E + YV R QT+ GRRK A+ RV L G
Sbjct: 9 ENPDNPDAETAAAEVTEAPVEAVPAESYVFER-----PIQTV---GRRKEAVVRVRLVPG 60
Query: 117 TGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGV 176
TGKF +N R + Y N + Q IK PLVT+ S+D++ HGGG SGQA A+ LG+
Sbjct: 61 TGKFNLNGRTLEGYFP-NKVHQQLIKAPLVTVDRVDSFDIYAHLHGGGPSGQAGALRLGI 119
Query: 177 ARALL 181
ARAL+
Sbjct: 120 ARALI 124
>sp|A7Z0S2|RS9_BACA2 30S ribosomal protein S9 OS=Bacillus amyloliquefaciens (strain
FZB42) GN=rpsI PE=3 SV=1
Length = 130
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G G+ ++N R+ E++ +P ++ IK PL +YDV V
Sbjct: 7 YGTGRRKSSVARVRLVPGEGRIVVNNREISEHIP-SPALIEDIKQPLTLTETAGTYDVLV 65
Query: 159 KAHGGGLSGQAQAITLGVARALLK 182
HGGGLSGQA AI G+ARALL+
Sbjct: 66 NVHGGGLSGQAGAIRHGIARALLE 89
>sp|Q20F01|RR9_OLTVI 30S ribosomal protein S9, chloroplastic OS=Oltmannsiellopsis
viridis GN=rps9 PE=3 SV=1
Length = 125
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 56/95 (58%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
GTGRRK A+A+V L G GK IIN + +YL N + I+ P + +D V
Sbjct: 1 MGTGRRKRAVAQVKLVAGEGKLIINGKPGFDYLHNNATAILSIQGPFQLFKLQKKFDTIV 60
Query: 159 KAHGGGLSGQAQAITLGVARALLKFCTSVPGIMES 193
K HGGGLS QA AI LGVARAL + TS +++S
Sbjct: 61 KVHGGGLSAQADAIKLGVARALCEINTSHRPVLKS 95
>sp|Q8Y459|RS9_LISMO 30S ribosomal protein S9 OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=rpsI PE=3 SV=1
Length = 130
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G GK +IN RD ++Y+ L + IK PLV +YDV V
Sbjct: 7 YGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAAL-REVIKQPLVATETLGNYDVLV 65
Query: 159 KAHGGGLSGQAQAITLGVARALLKFC 184
HGGG +GQA AI GVARALL+
Sbjct: 66 NVHGGGYTGQAGAIRHGVARALLQVA 91
>sp|Q8EWW8|RS9_MYCPE 30S ribosomal protein S9 OS=Mycoplasma penetrans (strain HF-2)
GN=rpsI PE=3 SV=1
Length = 130
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 100 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVK 159
G GRRK ++A V L GTGK +IN R EY N L +Q ++ PLV ++DVFVK
Sbjct: 8 GLGRRKSSVAHVKLVPGTGKILINQRKPNEYFP-NSLVIQDMEQPLVITDTRKNFDVFVK 66
Query: 160 AHGGGLSGQAQAITLGVARALL 181
GGG +GQA AI LG+ARALL
Sbjct: 67 VVGGGFTGQAGAIRLGIARALL 88
>sp|Q890R7|RS9_CLOTE 30S ribosomal protein S9 OS=Clostridium tetani (strain
Massachusetts / E88) GN=rpsI PE=3 SV=1
Length = 130
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK +IARV L G GK +IN RD +EY L + + PLV G + +DV V
Sbjct: 7 YGTGRRKKSIARVRLVPGEGKVLINKRDEEEYFGLETLRV-IVNQPLVLTGTKDKFDVLV 65
Query: 159 KAHGGGLSGQAQAITLGVARALLKFCTSV 187
+GGGL+GQA AI G++RALLK S+
Sbjct: 66 NVYGGGLTGQAGAIRHGISRALLKADESL 94
>sp|Q9TL29|RR9_NEPOL 30S ribosomal protein S9, chloroplastic OS=Nephroselmis olivacea
GN=rps9 PE=3 SV=1
Length = 134
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 51/80 (63%)
Query: 101 TGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKA 160
TGRRKCA+A+V + EGTG+ IN R YLQ NP +L + L YD VK
Sbjct: 12 TGRRKCAVAQVRIIEGTGQLTINQRPGVPYLQYNPAYLLAAQGALDVTELTNRYDTIVKT 71
Query: 161 HGGGLSGQAQAITLGVARAL 180
GGGL+GQA+AI LG+ARAL
Sbjct: 72 KGGGLTGQAEAIKLGLARAL 91
>sp|B8DB44|RS9_LISMH 30S ribosomal protein S9 OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=rpsI PE=3 SV=1
Length = 130
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 99 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFV 158
+GTGRRK ++ARV L G GK +IN RD ++Y+ L + IK PLV +YDV V
Sbjct: 7 YGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAAL-REVIKQPLVATETLGNYDVLV 65
Query: 159 KAHGGGLSGQAQAITLGVARALLKFC 184
HGGG +GQA AI GVARALL+
Sbjct: 66 NVHGGGYTGQAGAIRHGVARALLQVA 91
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,435,231
Number of Sequences: 539616
Number of extensions: 2732578
Number of successful extensions: 8960
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 7631
Number of HSP's gapped (non-prelim): 744
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)