Query 042362
Match_columns 294
No_of_seqs 233 out of 1820
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 05:30:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042362.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042362hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02670 transferase, transfer 100.0 1.6E-52 3.4E-57 395.8 28.4 280 8-290 180-467 (472)
2 PLN02764 glycosyltransferase f 100.0 1.5E-51 3.2E-56 386.6 28.5 286 2-293 158-450 (453)
3 PLN02208 glycosyltransferase f 100.0 4.5E-50 9.8E-55 377.6 28.2 278 2-289 157-440 (442)
4 PLN00414 glycosyltransferase f 100.0 2.2E-49 4.7E-54 373.3 29.0 257 31-292 182-444 (446)
5 PLN02410 UDP-glucoronosyl/UDP- 100.0 3.6E-49 7.9E-54 372.3 26.3 242 38-288 200-450 (451)
6 PLN02992 coniferyl-alcohol glu 100.0 8.4E-49 1.8E-53 370.9 27.6 271 9-289 170-470 (481)
7 PLN03015 UDP-glucosyl transfer 100.0 3.1E-48 6.7E-53 365.3 27.1 271 9-286 174-466 (470)
8 PLN03004 UDP-glycosyltransfera 100.0 2.1E-48 4.6E-53 366.2 24.2 256 9-273 178-440 (451)
9 PLN02173 UDP-glucosyl transfer 100.0 5.5E-48 1.2E-52 363.2 26.8 271 4-287 155-447 (449)
10 PLN02207 UDP-glycosyltransfera 100.0 1.2E-47 2.5E-52 362.3 26.9 269 9-289 183-466 (468)
11 PLN02555 limonoid glucosyltran 100.0 1.1E-47 2.4E-52 363.9 26.0 275 9-289 181-470 (480)
12 PLN00164 glucosyltransferase; 100.0 1.7E-47 3.7E-52 364.1 26.7 276 10-290 177-475 (480)
13 PLN02534 UDP-glycosyltransfera 100.0 4.6E-47 1E-51 360.2 27.8 276 8-289 185-487 (491)
14 PLN02863 UDP-glucoronosyl/UDP- 100.0 4.8E-47 1E-51 360.2 27.4 275 8-289 181-472 (477)
15 PLN03007 UDP-glucosyltransfera 100.0 1.3E-46 2.9E-51 359.0 26.8 274 8-289 188-481 (482)
16 PLN02562 UDP-glycosyltransfera 100.0 2E-46 4.2E-51 354.2 25.6 258 10-286 174-447 (448)
17 PLN02167 UDP-glycosyltransfera 100.0 2.8E-46 6E-51 356.0 26.4 269 10-288 188-472 (475)
18 PLN02554 UDP-glycosyltransfera 100.0 3.6E-46 7.7E-51 355.8 25.8 272 9-290 182-480 (481)
19 PLN02152 indole-3-acetate beta 100.0 3.8E-46 8.2E-51 351.3 25.1 270 9-286 162-454 (455)
20 PLN02210 UDP-glucosyl transfer 100.0 6.8E-46 1.5E-50 351.0 26.0 264 10-287 169-454 (456)
21 PLN02448 UDP-glycosyltransfera 100.0 1.8E-43 3.8E-48 335.8 25.4 262 10-288 179-457 (459)
22 PF00201 UDPGT: UDP-glucoronos 100.0 1E-40 2.2E-45 320.9 13.8 223 35-291 220-443 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 4.7E-39 1E-43 308.1 24.4 222 36-289 240-464 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 3.1E-33 6.6E-38 268.6 19.6 218 43-285 225-449 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 2.1E-28 4.6E-33 228.6 21.3 209 43-286 180-389 (392)
26 COG1819 Glycosyl transferases, 100.0 1.8E-27 3.8E-32 222.6 19.0 189 67-289 212-401 (406)
27 cd03784 GT1_Gtf_like This fami 99.9 1.8E-25 3.9E-30 209.2 19.1 193 64-285 205-400 (401)
28 PRK12446 undecaprenyldiphospho 99.7 9.5E-16 2.1E-20 141.4 17.4 189 68-287 154-350 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.6 3.7E-14 8.1E-19 130.3 15.4 166 100-290 182-355 (357)
30 PF04101 Glyco_tran_28_C: Glyc 99.5 6E-16 1.3E-20 127.8 -0.6 136 103-254 1-144 (167)
31 PF13528 Glyco_trans_1_3: Glyc 99.5 2.8E-13 6E-18 122.9 11.5 122 100-251 191-317 (318)
32 TIGR00661 MJ1255 conserved hyp 99.4 6.1E-12 1.3E-16 114.7 11.4 121 101-253 188-313 (321)
33 PLN02605 monogalactosyldiacylg 99.3 2E-10 4.4E-15 107.1 20.7 220 41-290 149-379 (382)
34 PRK00726 murG undecaprenyldiph 99.3 9E-11 2E-15 108.2 18.0 113 166-289 237-354 (357)
35 cd03785 GT1_MurG MurG is an N- 99.3 1.2E-10 2.5E-15 106.8 16.2 191 43-264 135-331 (350)
36 PRK13608 diacylglycerol glucos 99.3 3.4E-10 7.3E-15 106.0 18.3 135 99-254 200-338 (391)
37 PRK13609 diacylglycerol glucos 99.2 5E-10 1.1E-14 104.2 18.1 192 42-263 147-344 (380)
38 TIGR03492 conserved hypothetic 99.0 6.1E-08 1.3E-12 90.9 19.2 197 38-265 156-372 (396)
39 TIGR03590 PseG pseudaminic aci 99.0 4.2E-09 9.1E-14 94.2 10.1 105 102-220 171-278 (279)
40 TIGR01133 murG undecaprenyldip 98.9 2.2E-08 4.7E-13 91.7 14.6 80 175-263 245-327 (348)
41 TIGR00215 lpxB lipid-A-disacch 98.9 2.4E-08 5.1E-13 93.4 12.7 218 37-275 133-373 (385)
42 COG4671 Predicted glycosyl tra 98.7 5.7E-07 1.2E-11 80.8 14.8 193 36-253 161-364 (400)
43 PRK00025 lpxB lipid-A-disaccha 98.6 7E-07 1.5E-11 82.9 14.1 215 43-288 135-373 (380)
44 cd03814 GT1_like_2 This family 98.5 3.3E-05 7.1E-10 69.9 21.9 186 35-254 137-332 (364)
45 KOG3349 Predicted glycosyltran 98.5 6.3E-07 1.4E-11 71.0 8.8 120 103-231 5-133 (170)
46 PRK05749 3-deoxy-D-manno-octul 98.3 0.00018 3.9E-09 68.0 20.6 101 176-289 315-420 (425)
47 PRK14089 ipid-A-disaccharide s 98.2 2.1E-05 4.7E-10 72.3 13.1 233 31-283 66-344 (347)
48 cd03798 GT1_wlbH_like This fam 98.1 0.001 2.2E-08 59.7 22.1 194 33-254 139-344 (377)
49 PLN02871 UDP-sulfoquinovose:DA 98.1 0.00097 2.1E-08 63.9 22.9 126 103-254 264-400 (465)
50 cd03801 GT1_YqgM_like This fam 98.1 0.00093 2E-08 59.7 20.8 81 162-254 254-341 (374)
51 cd03794 GT1_wbuB_like This fam 98.1 0.0004 8.7E-09 62.9 18.4 132 101-254 219-365 (394)
52 cd03795 GT1_like_4 This family 98.1 0.00036 7.9E-09 63.3 18.1 130 103-254 192-332 (357)
53 cd04946 GT1_AmsK_like This fam 98.1 0.001 2.2E-08 62.7 20.9 83 163-254 288-377 (407)
54 cd03786 GT1_UDP-GlcNAc_2-Epime 98.0 3.3E-05 7.2E-10 71.0 10.5 132 100-253 197-336 (363)
55 cd03804 GT1_wbaZ_like This fam 98.0 0.00023 4.9E-09 65.2 15.1 126 104-254 197-326 (351)
56 COG5017 Uncharacterized conser 98.0 9.2E-05 2E-09 57.8 10.3 109 104-232 2-123 (161)
57 PRK15484 lipopolysaccharide 1, 98.0 0.0029 6.3E-08 59.0 22.5 113 162-288 255-377 (380)
58 cd03823 GT1_ExpE7_like This fa 98.0 0.0012 2.5E-08 59.5 19.3 131 101-254 190-329 (359)
59 cd03808 GT1_cap1E_like This fa 98.0 0.002 4.3E-08 57.6 20.6 135 101-254 187-329 (359)
60 PF13844 Glyco_transf_41: Glyc 98.0 7.8E-05 1.7E-09 70.7 11.6 172 101-288 284-462 (468)
61 TIGR00236 wecB UDP-N-acetylglu 98.0 8.4E-05 1.8E-09 68.8 11.3 106 163-288 254-363 (365)
62 cd03822 GT1_ecORF704_like This 97.9 0.0034 7.4E-08 56.8 20.8 79 163-254 246-334 (366)
63 COG1519 KdtA 3-deoxy-D-manno-o 97.9 0.0046 1E-07 57.5 21.0 238 28-288 163-417 (419)
64 PRK10307 putative glycosyl tra 97.8 0.0051 1.1E-07 57.8 21.6 115 164-290 284-409 (412)
65 cd04962 GT1_like_5 This family 97.8 0.0029 6.3E-08 57.9 19.6 80 163-254 252-336 (371)
66 cd04949 GT1_gtfA_like This fam 97.8 0.00064 1.4E-08 62.7 14.8 96 163-267 260-359 (372)
67 cd03800 GT1_Sucrose_synthase T 97.8 0.0028 6E-08 58.5 19.1 80 163-254 282-368 (398)
68 cd03820 GT1_amsD_like This fam 97.8 0.0051 1.1E-07 54.7 20.0 89 163-266 234-328 (348)
69 cd03817 GT1_UGDG_like This fam 97.8 0.0027 5.8E-08 57.3 18.2 80 162-254 257-343 (374)
70 TIGR02149 glgA_Coryne glycogen 97.8 0.005 1.1E-07 56.9 19.7 84 165-254 261-352 (388)
71 cd03821 GT1_Bme6_like This fam 97.7 0.0036 7.7E-08 56.4 18.2 79 162-254 260-345 (375)
72 cd03799 GT1_amsK_like This is 97.7 0.0038 8.2E-08 56.5 18.3 81 162-254 234-327 (355)
73 TIGR03449 mycothiol_MshA UDP-N 97.7 0.013 2.9E-07 54.6 21.9 80 163-254 282-368 (405)
74 cd03809 GT1_mtfB_like This fam 97.7 0.0016 3.4E-08 59.0 15.2 88 162-266 251-345 (365)
75 cd03825 GT1_wcfI_like This fam 97.7 0.014 3E-07 53.0 21.4 81 162-254 242-330 (365)
76 cd03811 GT1_WabH_like This fam 97.7 0.004 8.6E-08 55.4 17.1 79 163-253 245-331 (353)
77 cd03818 GT1_ExpC_like This fam 97.6 0.0043 9.4E-08 57.9 17.6 82 163-254 280-366 (396)
78 cd04950 GT1_like_1 Glycosyltra 97.6 0.007 1.5E-07 56.2 18.2 108 163-288 253-371 (373)
79 COG3980 spsG Spore coat polysa 97.6 0.00097 2.1E-08 58.6 10.8 146 103-270 160-306 (318)
80 PF00534 Glycos_transf_1: Glyc 97.5 0.0022 4.8E-08 52.3 12.5 80 162-253 71-157 (172)
81 PRK15427 colanic acid biosynth 97.5 0.0044 9.5E-08 58.4 15.8 79 163-253 278-369 (406)
82 TIGR03087 stp1 sugar transfera 97.5 0.015 3.4E-07 54.3 19.3 79 162-254 278-362 (397)
83 cd03807 GT1_WbnK_like This fam 97.5 0.03 6.4E-07 50.1 20.1 77 164-254 251-332 (365)
84 cd03819 GT1_WavL_like This fam 97.5 0.035 7.6E-07 50.3 20.7 137 101-253 184-329 (355)
85 cd05844 GT1_like_7 Glycosyltra 97.5 0.004 8.6E-08 56.9 14.4 80 163-254 244-336 (367)
86 TIGR03088 stp2 sugar transfera 97.4 0.028 6.2E-07 51.7 19.8 79 164-254 255-338 (374)
87 PRK09922 UDP-D-galactose:(gluc 97.4 0.0024 5.1E-08 58.9 12.4 132 102-255 180-325 (359)
88 PF02684 LpxB: Lipid-A-disacch 97.4 0.005 1.1E-07 57.2 14.3 197 37-254 128-340 (373)
89 cd04955 GT1_like_6 This family 97.4 0.015 3.3E-07 52.8 17.4 77 162-254 246-330 (363)
90 cd04951 GT1_WbdM_like This fam 97.4 0.0043 9.3E-08 56.3 13.6 88 163-266 244-336 (360)
91 TIGR02918 accessory Sec system 97.4 0.01 2.2E-07 57.6 16.2 101 163-268 375-481 (500)
92 PRK09814 beta-1,6-galactofuran 97.3 0.0014 3E-08 60.1 9.7 109 162-284 205-331 (333)
93 cd03816 GT1_ALG1_like This fam 97.3 0.0025 5.5E-08 60.1 11.2 77 164-254 294-381 (415)
94 PRK01021 lpxB lipid-A-disaccha 97.2 0.016 3.4E-07 56.8 15.8 214 37-272 356-590 (608)
95 PF02350 Epimerase_2: UDP-N-ac 97.1 0.00081 1.8E-08 62.1 5.3 186 38-253 118-317 (346)
96 cd03812 GT1_CapH_like This fam 97.0 0.083 1.8E-06 47.9 18.1 79 163-254 248-331 (358)
97 cd03805 GT1_ALG2_like This fam 97.0 0.083 1.8E-06 48.8 18.2 80 162-254 278-364 (392)
98 KOG4626 O-linked N-acetylgluco 97.0 0.0064 1.4E-07 58.9 10.2 126 101-232 758-889 (966)
99 PLN02949 transferase, transfer 96.9 0.052 1.1E-06 52.1 16.2 110 163-288 334-456 (463)
100 PHA01633 putative glycosyl tra 96.9 0.27 5.8E-06 45.2 19.9 83 163-253 200-306 (335)
101 cd03806 GT1_ALG11_like This fa 96.9 0.028 6.1E-07 53.2 14.0 78 163-254 304-392 (419)
102 TIGR02472 sucr_P_syn_N sucrose 96.8 0.18 3.9E-06 47.9 19.0 82 163-254 316-406 (439)
103 PF13692 Glyco_trans_1_4: Glyc 96.8 0.0045 9.7E-08 48.3 6.5 79 163-253 52-134 (135)
104 PLN02275 transferase, transfer 96.7 0.081 1.8E-06 49.1 15.4 75 164-252 286-371 (371)
105 cd03796 GT1_PIG-A_like This fa 96.7 0.081 1.8E-06 49.4 15.3 78 163-254 249-333 (398)
106 cd03813 GT1_like_3 This family 96.6 0.1 2.2E-06 50.2 15.7 80 163-254 353-442 (475)
107 COG3914 Spy Predicted O-linked 96.6 0.041 8.9E-07 53.0 12.2 139 100-250 428-574 (620)
108 cd03792 GT1_Trehalose_phosphor 96.5 0.13 2.8E-06 47.4 15.5 77 163-253 251-336 (372)
109 COG0763 LpxB Lipid A disacchar 96.5 0.055 1.2E-06 49.9 12.1 225 37-285 131-378 (381)
110 TIGR02468 sucrsPsyn_pln sucros 96.3 0.32 7E-06 50.8 18.2 113 163-288 547-670 (1050)
111 PRK10017 colanic acid biosynth 96.3 0.82 1.8E-05 43.5 19.7 180 91-285 224-421 (426)
112 TIGR03568 NeuC_NnaA UDP-N-acet 96.3 0.099 2.1E-06 48.6 13.0 165 67-253 166-338 (365)
113 cd03802 GT1_AviGT4_like This f 96.2 0.074 1.6E-06 47.7 11.9 130 103-253 172-307 (335)
114 PRK15179 Vi polysaccharide bio 96.1 0.76 1.7E-05 46.4 19.1 95 163-267 573-673 (694)
115 PHA01630 putative group 1 glyc 96.0 1.2 2.6E-05 40.8 19.3 94 171-271 197-311 (331)
116 PF04007 DUF354: Protein of un 95.7 0.45 9.7E-06 43.7 14.3 138 87-252 166-308 (335)
117 PRK14098 glycogen synthase; Pr 95.2 0.21 4.6E-06 48.3 11.1 132 103-252 308-449 (489)
118 PRK00654 glgA glycogen synthas 95.1 0.7 1.5E-05 44.3 14.4 136 102-253 282-427 (466)
119 cd03791 GT1_Glycogen_synthase_ 95.0 0.27 5.9E-06 47.0 11.1 135 103-253 297-441 (476)
120 TIGR02095 glgA glycogen/starch 94.9 0.52 1.1E-05 45.2 13.0 131 103-253 292-436 (473)
121 PF13524 Glyco_trans_1_2: Glyc 94.8 0.32 7E-06 35.2 8.8 80 189-283 9-91 (92)
122 PF06722 DUF1205: Protein of u 94.0 0.066 1.4E-06 39.9 3.4 51 89-139 28-83 (97)
123 PF06258 Mito_fiss_Elm1: Mitoc 94.0 1.5 3.3E-05 39.8 12.9 58 173-231 221-281 (311)
124 PLN02846 digalactosyldiacylgly 93.9 1.4 3E-05 42.4 13.1 72 168-254 288-363 (462)
125 PRK15490 Vi polysaccharide bio 93.8 1.6 3.4E-05 42.9 13.3 64 163-232 454-522 (578)
126 TIGR02919 accessory Sec system 93.2 3 6.6E-05 39.8 14.1 186 32-266 230-421 (438)
127 PRK10125 putative glycosyl tra 92.5 4.5 9.8E-05 38.1 14.2 60 177-249 303-366 (405)
128 PLN02501 digalactosyldiacylgly 91.9 1.6 3.4E-05 44.0 10.4 75 165-254 602-681 (794)
129 TIGR02193 heptsyl_trn_I lipopo 90.6 1.9 4.1E-05 39.0 9.1 142 93-252 171-319 (319)
130 TIGR03713 acc_sec_asp1 accesso 90.4 0.71 1.5E-05 45.1 6.5 74 164-254 409-488 (519)
131 TIGR02400 trehalose_OtsA alpha 90.2 2.4 5.1E-05 40.7 9.8 103 169-287 341-455 (456)
132 PRK14099 glycogen synthase; Pr 90.0 8.2 0.00018 37.3 13.5 62 183-250 370-440 (485)
133 cd01635 Glycosyltransferase_GT 88.7 1.6 3.5E-05 36.0 6.8 49 162-212 159-215 (229)
134 PLN02939 transferase, transfer 87.9 11 0.00024 39.4 13.1 83 163-253 836-930 (977)
135 PLN02316 synthase/transferase 87.0 32 0.0007 36.5 16.0 82 164-253 900-997 (1036)
136 PF00731 AIRC: AIR carboxylase 86.4 9.8 0.00021 30.7 9.6 140 102-273 1-148 (150)
137 TIGR02398 gluc_glyc_Psyn gluco 86.2 34 0.00074 33.2 15.5 109 166-290 364-484 (487)
138 cd03788 GT1_TPS Trehalose-6-Ph 84.4 3.8 8.3E-05 39.3 7.6 103 168-286 345-459 (460)
139 COG0381 WecB UDP-N-acetylgluco 83.9 1.8 4E-05 40.2 4.8 106 164-289 262-371 (383)
140 TIGR02470 sucr_synth sucrose s 82.4 8 0.00017 39.7 9.1 80 163-252 618-707 (784)
141 PLN00142 sucrose synthase 82.1 7.5 0.00016 40.0 8.8 59 184-252 668-730 (815)
142 PF07429 Glyco_transf_56: 4-al 80.7 22 0.00048 32.8 10.4 141 102-253 184-332 (360)
143 COG4370 Uncharacterized protei 79.7 12 0.00026 33.9 8.2 100 176-289 307-410 (412)
144 TIGR02201 heptsyl_trn_III lipo 79.4 16 0.00034 33.4 9.4 99 100-208 180-285 (344)
145 PF04464 Glyphos_transf: CDP-G 79.3 2.7 5.8E-05 38.8 4.3 112 163-287 251-368 (369)
146 PLN03063 alpha,alpha-trehalose 78.2 6 0.00013 40.8 6.8 98 176-289 371-478 (797)
147 cd03789 GT1_LPS_heptosyltransf 75.7 18 0.00038 31.9 8.4 96 101-208 121-223 (279)
148 PRK02797 4-alpha-L-fucosyltran 75.4 38 0.00082 30.8 10.2 135 103-251 146-291 (322)
149 PF05159 Capsule_synth: Capsul 74.1 12 0.00026 33.0 6.8 41 166-209 185-225 (269)
150 PRK10422 lipopolysaccharide co 73.8 28 0.0006 31.9 9.5 98 101-208 183-287 (352)
151 PRK14501 putative bifunctional 73.7 6.5 0.00014 40.1 5.7 111 167-289 345-463 (726)
152 PF01075 Glyco_transf_9: Glyco 72.6 20 0.00043 30.7 7.8 99 100-208 104-208 (247)
153 PRK02155 ppnK NAD(+)/NADH kina 69.6 38 0.00083 30.4 9.1 52 183-254 64-119 (291)
154 COG3660 Predicted nucleoside-d 67.8 91 0.002 27.9 12.5 118 103-231 164-298 (329)
155 TIGR00725 conserved hypothetic 66.4 25 0.00053 28.6 6.5 26 185-210 95-123 (159)
156 PRK12446 undecaprenyldiphospho 63.3 46 0.001 30.6 8.6 99 102-208 3-120 (352)
157 PRK04885 ppnK inorganic polyph 62.1 21 0.00045 31.7 5.8 51 183-253 36-92 (265)
158 TIGR02195 heptsyl_trn_II lipop 61.5 51 0.0011 29.8 8.5 96 100-208 173-276 (334)
159 PLN02470 acetolactate synthase 60.9 76 0.0017 31.4 10.1 28 182-209 76-109 (585)
160 PRK06718 precorrin-2 dehydroge 59.1 95 0.0021 26.2 9.1 152 94-274 5-165 (202)
161 PRK10964 ADP-heptose:LPS hepto 58.9 31 0.00068 31.1 6.6 132 101-253 178-321 (322)
162 PF03808 Glyco_tran_WecB: Glyc 58.7 44 0.00096 27.3 6.8 83 25-112 30-113 (172)
163 cd03793 GT1_Glycogen_synthase_ 57.4 37 0.0008 33.7 7.0 61 192-253 488-551 (590)
164 KOG2941 Beta-1,4-mannosyltrans 57.0 1.7E+02 0.0037 27.3 12.9 132 99-253 252-404 (444)
165 COG0438 RfaG Glycosyltransfera 56.8 1.3E+02 0.0027 25.8 15.4 80 163-254 256-342 (381)
166 PRK02649 ppnK inorganic polyph 54.9 30 0.00066 31.3 5.6 53 182-254 68-124 (305)
167 COG2159 Predicted metal-depend 54.6 36 0.00079 30.6 6.1 115 65-199 95-211 (293)
168 PRK04539 ppnK inorganic polyph 54.0 49 0.0011 29.8 6.8 52 183-254 69-124 (296)
169 cd01840 SGNH_hydrolase_yrhL_li 53.5 47 0.001 26.2 6.1 38 100-138 50-87 (150)
170 COG0801 FolK 7,8-dihydro-6-hyd 53.3 29 0.00063 28.3 4.7 29 103-131 3-31 (160)
171 PRK14077 pnk inorganic polypho 52.9 37 0.00081 30.5 5.9 52 183-254 65-120 (287)
172 PRK03372 ppnK inorganic polyph 52.5 48 0.001 30.1 6.5 52 183-254 73-128 (306)
173 KOG0853 Glycosyltransferase [C 52.4 9.2 0.0002 36.9 2.0 62 194-266 381-442 (495)
174 PRK10916 ADP-heptose:LPS hepto 52.0 1E+02 0.0022 28.0 8.9 99 100-208 179-286 (348)
175 PLN02929 NADH kinase 50.1 38 0.00083 30.6 5.4 64 183-254 65-137 (301)
176 cd06533 Glyco_transf_WecG_TagA 50.0 1.4E+02 0.003 24.3 10.0 84 24-112 27-111 (171)
177 PRK01911 ppnK inorganic polyph 48.2 54 0.0012 29.5 6.1 52 183-254 65-120 (292)
178 cd07039 TPP_PYR_POX Pyrimidine 46.8 1E+02 0.0022 25.0 7.1 27 183-209 64-96 (164)
179 PRK14075 pnk inorganic polypho 46.0 64 0.0014 28.4 6.2 52 183-254 42-94 (256)
180 COG0859 RfaF ADP-heptose:LPS h 45.8 67 0.0014 29.3 6.5 95 101-208 175-276 (334)
181 COG3195 Uncharacterized protei 44.8 1.2E+02 0.0025 25.0 6.8 76 193-272 88-164 (176)
182 PRK03501 ppnK inorganic polyph 44.1 84 0.0018 27.9 6.6 53 183-254 40-97 (264)
183 PRK03378 ppnK inorganic polyph 43.8 56 0.0012 29.4 5.5 52 183-254 64-119 (292)
184 PRK01231 ppnK inorganic polyph 43.5 70 0.0015 28.8 6.1 52 183-254 63-118 (295)
185 PRK01185 ppnK inorganic polyph 42.1 63 0.0014 28.8 5.5 52 183-254 53-105 (271)
186 cd07025 Peptidase_S66 LD-Carbo 41.2 55 0.0012 29.2 5.1 73 115-211 47-121 (282)
187 PLN03064 alpha,alpha-trehalose 41.0 99 0.0021 32.7 7.4 98 177-289 456-562 (934)
188 cd07035 TPP_PYR_POX_like Pyrim 40.5 1.8E+02 0.0039 22.8 7.8 26 184-209 61-92 (155)
189 TIGR00696 wecB_tagA_cpsF bacte 40.2 1E+02 0.0022 25.4 6.2 81 25-111 30-111 (177)
190 TIGR00661 MJ1255 conserved hyp 39.6 65 0.0014 29.0 5.4 32 177-208 88-119 (321)
191 cd03784 GT1_Gtf_like This fami 38.9 1.7E+02 0.0036 27.0 8.2 35 103-139 3-37 (401)
192 PRK03202 6-phosphofructokinase 38.4 2.2E+02 0.0048 26.0 8.6 37 177-213 88-127 (320)
193 PRK14076 pnk inorganic polypho 38.1 71 0.0015 31.6 5.8 53 182-254 348-404 (569)
194 KOG0574 STE20-like serine/thre 37.5 85 0.0018 28.7 5.5 64 176-275 96-159 (502)
195 PF10083 DUF2321: Uncharacteri 36.8 68 0.0015 26.0 4.3 69 208-286 78-149 (158)
196 PF10933 DUF2827: Protein of u 36.7 94 0.002 28.8 5.8 102 167-286 256-363 (364)
197 PF00282 Pyridoxal_deC: Pyrido 36.5 1.2E+02 0.0026 28.2 6.8 70 183-253 104-190 (373)
198 PF06180 CbiK: Cobalt chelatas 36.3 48 0.001 29.4 3.8 39 102-140 2-43 (262)
199 PF09547 Spore_IV_A: Stage IV 35.8 2.4E+02 0.0052 27.2 8.4 89 162-253 113-234 (492)
200 PF06506 PrpR_N: Propionate ca 35.6 16 0.00034 30.1 0.7 33 179-212 31-63 (176)
201 PRK02231 ppnK inorganic polyph 35.3 1.1E+02 0.0025 27.2 6.1 51 183-253 43-97 (272)
202 PLN02935 Bifunctional NADH kin 34.4 1.1E+02 0.0024 29.8 6.1 53 182-254 262-318 (508)
203 cd00763 Bacterial_PFK Phosphof 34.1 2.3E+02 0.005 25.8 8.0 37 177-213 87-126 (317)
204 cd03412 CbiK_N Anaerobic cobal 33.8 75 0.0016 24.6 4.2 37 102-138 2-40 (127)
205 PF08030 NAD_binding_6: Ferric 32.9 31 0.00068 27.2 2.0 38 103-140 4-46 (156)
206 COG1154 Dxs Deoxyxylulose-5-ph 32.9 5.2E+02 0.011 25.9 10.8 115 101-253 502-623 (627)
207 COG0299 PurN Folate-dependent 32.7 2.8E+02 0.0062 23.5 7.6 117 117-268 66-185 (200)
208 TIGR00732 dprA DNA protecting 32.6 3.2E+02 0.0069 23.4 8.9 39 192-230 171-211 (220)
209 cd07766 DHQ_Fe-ADH Dehydroquin 32.3 1E+02 0.0022 27.9 5.5 28 183-211 79-113 (332)
210 PF04558 tRNA_synt_1c_R1: Glut 31.7 47 0.001 27.2 2.8 30 216-254 102-132 (164)
211 cd08806 CARD_CARD14_CARMA2 Cas 31.4 1.4E+02 0.003 21.7 4.7 35 250-287 38-75 (86)
212 cd08194 Fe-ADH6 Iron-containin 31.4 91 0.002 29.0 5.1 10 202-211 122-131 (375)
213 TIGR02482 PFKA_ATP 6-phosphofr 31.2 2.9E+02 0.0064 24.9 8.1 37 177-213 86-126 (301)
214 cd07037 TPP_PYR_MenD Pyrimidin 31.2 60 0.0013 26.4 3.4 27 183-209 61-93 (162)
215 cd07038 TPP_PYR_PDC_IPDC_like 31.1 2.8E+02 0.006 22.3 7.6 26 184-209 61-92 (162)
216 PRK14092 2-amino-4-hydroxy-6-h 30.9 1.1E+02 0.0024 25.0 4.9 30 99-128 5-34 (163)
217 PF03949 Malic_M: Malic enzyme 30.8 1.7E+02 0.0036 25.9 6.2 91 13-112 76-170 (255)
218 cd07062 Peptidase_S66_mccF_lik 30.7 88 0.0019 28.3 4.7 73 115-211 51-125 (308)
219 PRK13010 purU formyltetrahydro 30.6 2.8E+02 0.006 24.9 7.8 68 189-267 205-274 (289)
220 PLN02948 phosphoribosylaminoim 30.4 5.6E+02 0.012 25.5 13.2 141 101-273 410-558 (577)
221 TIGR03609 S_layer_CsaB polysac 30.2 3.2E+02 0.0069 24.1 8.3 113 101-226 172-290 (298)
222 cd00763 Bacterial_PFK Phosphof 30.2 1.6E+02 0.0035 26.8 6.3 61 189-252 171-237 (317)
223 PF13941 MutL: MutL protein 30.1 3.7E+02 0.0081 25.9 8.9 46 185-231 251-296 (457)
224 PRK03708 ppnK inorganic polyph 30.1 53 0.0012 29.3 3.1 51 183-253 58-111 (277)
225 PRK04761 ppnK inorganic polyph 29.9 65 0.0014 28.2 3.6 28 183-210 26-57 (246)
226 KOG4175 Tryptophan synthase al 29.7 79 0.0017 26.9 3.8 42 93-134 8-49 (268)
227 cd08181 PPD-like 1,3-propanedi 29.4 1.1E+02 0.0023 28.3 5.1 11 202-212 124-134 (357)
228 COG2120 Uncharacterized protei 29.3 2.2E+02 0.0047 24.6 6.8 67 67-136 10-83 (237)
229 TIGR01470 cysG_Nterm siroheme 29.3 3.5E+02 0.0075 22.8 10.0 154 94-273 4-164 (205)
230 PLN02884 6-phosphofructokinase 28.9 5.1E+02 0.011 24.6 9.6 37 176-212 137-182 (411)
231 PF05225 HTH_psq: helix-turn-h 28.8 82 0.0018 19.6 3.0 26 240-267 1-26 (45)
232 TIGR00730 conserved hypothetic 28.4 1.9E+02 0.0041 23.9 5.9 25 185-209 100-133 (178)
233 TIGR02638 lactal_redase lactal 27.8 83 0.0018 29.3 4.1 11 201-211 129-139 (379)
234 PF03033 Glyco_transf_28: Glyc 27.5 1.2E+02 0.0025 23.1 4.4 34 103-138 1-34 (139)
235 PF05693 Glycogen_syn: Glycoge 27.2 73 0.0016 31.8 3.7 74 193-271 484-566 (633)
236 PRK08155 acetolactate synthase 27.2 96 0.0021 30.5 4.7 27 183-209 77-109 (564)
237 PF06204 CBM_X: Putative carbo 26.3 42 0.00091 23.0 1.4 23 171-193 24-46 (66)
238 PF10093 DUF2331: Uncharacteri 25.9 5.6E+02 0.012 24.0 11.6 93 114-210 192-290 (374)
239 PRK11914 diacylglycerol kinase 25.7 1.7E+02 0.0037 26.1 5.7 27 184-210 66-96 (306)
240 PRK06932 glycerate dehydrogena 25.5 2E+02 0.0044 26.0 6.1 100 101-249 148-248 (314)
241 cd08191 HHD 6-hydroxyhexanoate 25.5 1.4E+02 0.0031 27.8 5.3 44 90-136 13-56 (386)
242 TIGR01162 purE phosphoribosyla 25.4 3.7E+02 0.008 21.8 12.5 134 106-273 3-146 (156)
243 PRK05282 (alpha)-aspartyl dipe 25.3 3.2E+02 0.007 23.7 7.0 44 91-136 24-67 (233)
244 TIGR01498 folK 2-amino-4-hydro 24.9 89 0.0019 24.3 3.2 28 104-131 1-28 (127)
245 PRK13011 formyltetrahydrofolat 24.5 4.4E+02 0.0096 23.5 8.0 70 188-268 200-271 (286)
246 PLN02727 NAD kinase 24.4 1.9E+02 0.0042 30.4 6.2 53 182-254 743-799 (986)
247 cd03409 Chelatase_Class_II Cla 24.4 2.3E+02 0.005 20.2 5.3 35 103-137 2-39 (101)
248 PRK13337 putative lipid kinase 24.0 3.4E+02 0.0073 24.2 7.3 28 183-210 58-91 (304)
249 TIGR00147 lipid kinase, YegS/R 23.5 2.5E+02 0.0055 24.7 6.4 28 183-210 58-91 (293)
250 COG1691 NCAIR mutase (PurE)-re 23.3 2.3E+02 0.005 24.6 5.5 117 103-252 119-250 (254)
251 PHA02754 hypothetical protein; 23.1 1.6E+02 0.0035 19.6 3.5 29 240-275 3-31 (67)
252 PRK08051 fre FMN reductase; Va 23.1 1.6E+02 0.0035 25.0 4.8 39 100-138 102-140 (232)
253 PRK02645 ppnK inorganic polyph 23.0 1E+02 0.0022 27.9 3.6 28 183-210 58-89 (305)
254 cd01832 SGNH_hydrolase_like_1 22.9 2.5E+02 0.0053 22.4 5.7 35 103-137 70-112 (185)
255 PRK07114 keto-hydroxyglutarate 22.8 4.1E+02 0.0088 22.9 7.1 76 26-113 116-192 (222)
256 PRK10117 trehalose-6-phosphate 22.7 4.3E+02 0.0092 25.7 7.9 59 224-289 395-454 (474)
257 COG1052 LdhA Lactate dehydroge 22.7 1.8E+02 0.004 26.6 5.3 63 170-250 190-252 (324)
258 cd08193 HVD 5-hydroxyvalerate 22.6 1.5E+02 0.0032 27.5 4.8 10 202-211 125-134 (376)
259 PRK15454 ethanol dehydrogenase 22.1 1.5E+02 0.0032 27.9 4.6 10 202-211 148-157 (395)
260 COG1737 RpiR Transcriptional r 22.1 2.9E+02 0.0063 24.5 6.4 37 175-211 172-213 (281)
261 PRK06882 acetolactate synthase 22.0 2.6E+02 0.0057 27.5 6.7 27 183-209 68-100 (574)
262 PRK07313 phosphopantothenoylcy 22.0 4.6E+02 0.0099 21.7 14.3 52 202-253 113-179 (182)
263 PRK10624 L-1,2-propanediol oxi 21.8 1.6E+02 0.0034 27.5 4.8 10 202-211 131-140 (382)
264 PRK10239 2-amino-4-hydroxy-6-h 21.7 1.5E+02 0.0033 24.0 4.1 27 103-129 3-29 (159)
265 PF10087 DUF2325: Uncharacteri 21.5 2E+02 0.0044 20.8 4.4 17 120-136 13-29 (97)
266 PF06792 UPF0261: Uncharacteri 21.3 4.5E+02 0.0097 24.9 7.5 98 99-213 183-281 (403)
267 PF00982 Glyco_transf_20: Glyc 21.3 3.2E+02 0.0069 26.5 6.9 106 168-287 357-473 (474)
268 smart00096 UTG Uteroglobin. 20.9 3E+02 0.0064 19.1 5.6 44 240-286 17-63 (69)
269 cd03363 TOPRIM_TopoIA_TopoI TO 20.6 1.3E+02 0.0028 23.1 3.3 31 30-61 61-91 (123)
270 PF01995 DUF128: Domain of unk 20.3 5E+02 0.011 22.6 7.2 80 101-210 145-224 (236)
271 smart00046 DAGKc Diacylglycero 20.2 1.1E+02 0.0024 23.4 2.9 29 184-212 51-88 (124)
272 cd00764 Eukaryotic_PFK Phospho 20.1 2.2E+02 0.0047 29.5 5.6 73 178-252 185-275 (762)
No 1
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.6e-52 Score=395.81 Aligned_cols=280 Identities=32% Similarity=0.556 Sum_probs=232.3
Q ss_pred CCCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCC--CCCCCC
Q 042362 8 FDLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQE--PVYTDN 85 (294)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~--~~~~~~ 85 (294)
+.++..++|.|....+....+...+.+....+.+ ++.+|+|||.|||++++++++..+++++++|||+... ......
T Consensus 180 ~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~-~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~ 258 (472)
T PLN02670 180 IVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGG-SDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDD 258 (472)
T ss_pred ccccHHHhhHHHhccCccchHHHHHHHHHhhccc-CCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCcccccccccc
Confidence 5688899999654322122334444455556666 9999999999999999999987666789999999753 110111
Q ss_pred ----CCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhc
Q 042362 86 ----NDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQG 161 (294)
Q Consensus 86 ----~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~ 161 (294)
..+.+|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++...+...+....+|++|.+|+
T Consensus 259 ~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~-- 336 (472)
T PLN02670 259 TIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERV-- 336 (472)
T ss_pred ccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhc--
Confidence 12357999999998899999999999999999999999999999999999998532211111235999999999
Q ss_pred CCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccH
Q 042362 162 NNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRK 241 (294)
Q Consensus 162 ~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~ 241 (294)
.++++++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.|+|+.+.+.+..+.+++
T Consensus 337 ~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~ 416 (472)
T PLN02670 337 KGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTS 416 (472)
T ss_pred cCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999964221245899
Q ss_pred HHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHhhc
Q 042362 242 KDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG--DDEEINVVEKLLQLV 290 (294)
Q Consensus 242 ~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~--~~~~~~~v~~l~~~~ 290 (294)
++|.++|+++|.++++.+||+||+++++.+++.+ .+.++.+++.|.+..
T Consensus 417 e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 417 DSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred HHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 9999999999987667899999999999999987 888899999998764
No 2
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.5e-51 Score=386.61 Aligned_cols=286 Identities=30% Similarity=0.556 Sum_probs=235.1
Q ss_pred CCCCCCCCCChhHHhhhhhhh--cccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCC
Q 042362 2 KFPFPEFDLPESEIQKMTQFK--HRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQE 79 (294)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~ 79 (294)
|+|.+.+.++.++++.+.... ...+....+..++.+.+.+ ++.+|+|||+|||++++++++...++++++|||+...
T Consensus 158 glp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~ 236 (453)
T PLN02764 158 GYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMN-SDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPE 236 (453)
T ss_pred CCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhcc-CCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccC
Confidence 455444568889998854321 1112233455555566666 9999999999999999999987555689999999754
Q ss_pred CCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhh
Q 042362 80 PVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEI 159 (294)
Q Consensus 80 ~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~ 159 (294)
.. .....+.+|.+|||++++++||||||||...++.+++.+++.+|+.++.+|+|+++...+.. +....+|++|.+|+
T Consensus 237 ~~-~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~-~~~~~lp~~f~~r~ 314 (453)
T PLN02764 237 PD-KTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSS-TIQEALPEGFEERV 314 (453)
T ss_pred cc-ccccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCc-chhhhCCcchHhhh
Confidence 21 11123468999999999999999999999999999999999999999999999998643221 22346999999999
Q ss_pred hcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHH-hCcEEEecccccCCc
Q 042362 160 QGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD-IGVGLEVPREEINQR 238 (294)
Q Consensus 160 ~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~~~~ 238 (294)
.++++++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++ .|+|+.+.+.+ .+.
T Consensus 315 --~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~-~~~ 391 (453)
T PLN02764 315 --KGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE-TGW 391 (453)
T ss_pred --ccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc-CCc
Confidence 89999999999999999999999999999999999999999999999999999999999975 69999885311 136
Q ss_pred ccHHHHHHHHHHHHcC--CccHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHhhccCC
Q 042362 239 VRKKDLARVIKQVVEQ--EEGQQIKRKAKELSESIKKKG--DDEEINVVEKLLQLVKAP 293 (294)
Q Consensus 239 ~t~~~l~~ai~~vl~~--~~~~~~r~~a~~l~~~~~~~~--~~~~~~~v~~l~~~~~~~ 293 (294)
++.++|.++|+++|++ ++++.+|++++++++.++++| ..++++||+++.+....-
T Consensus 392 ~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~~~~ 450 (453)
T PLN02764 392 FSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLVSGT 450 (453)
T ss_pred cCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcccc
Confidence 8999999999999975 456789999999999999977 889999999999876543
No 3
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=4.5e-50 Score=377.57 Aligned_cols=278 Identities=27% Similarity=0.507 Sum_probs=227.6
Q ss_pred CCCCCCCCCChhHHhhhhhhhcccCCCcc-hHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCC
Q 042362 2 KFPFPEFDLPESEIQKMTQFKHRIVNGTE-NKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEP 80 (294)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~ 80 (294)
|+|...+.++..++|.|. . ...... +..++.+.+.+ ++.+|+|||.|||++++++++..+.+++++|||+....
T Consensus 157 glp~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~-~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~ 231 (442)
T PLN02208 157 GYPSSKVLFRENDAHALA---T-LSIFYKRLYHQITTGLKS-CDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEP 231 (442)
T ss_pred CCCCcccccCHHHcCccc---c-cchHHHHHHHHHHhhhcc-CCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCc
Confidence 344333568899999751 1 111111 22233345556 99999999999999999999887767999999997542
Q ss_pred CCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhh
Q 042362 81 VYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQ 160 (294)
Q Consensus 81 ~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~ 160 (294)
. .....+.+|.+|||.+++++||||||||...++.+++.+++.+++.++.+|+|+++...+. .+....+|++|.+|+
T Consensus 232 ~-~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~-~~~~~~lp~~f~~r~- 308 (442)
T PLN02208 232 D-TSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGS-STVQEGLPEGFEERV- 308 (442)
T ss_pred C-CCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcc-cchhhhCCHHHHHHH-
Confidence 2 1123567899999999889999999999999999999999999988999999999854221 112245899999999
Q ss_pred cCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHH-hCcEEEecccccCCcc
Q 042362 161 GNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD-IGVGLEVPREEINQRV 239 (294)
Q Consensus 161 ~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~~~~~ 239 (294)
.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++ .|+|+.+.+.+ .+.+
T Consensus 309 -~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~-~~~~ 386 (442)
T PLN02208 309 -KGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK-TGWF 386 (442)
T ss_pred -hcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc-CCcC
Confidence 88999999999999999999999999999999999999999999999999999999999877 79999997421 2358
Q ss_pred cHHHHHHHHHHHHcC--CccHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHhh
Q 042362 240 RKKDLARVIKQVVEQ--EEGQQIKRKAKELSESIKKKG--DDEEINVVEKLLQL 289 (294)
Q Consensus 240 t~~~l~~ai~~vl~~--~~~~~~r~~a~~l~~~~~~~~--~~~~~~~v~~l~~~ 289 (294)
++++|.++|+++|++ |+++.+|++++++++.+.+.| ..++++||+++.+.
T Consensus 387 ~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 387 SKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred cHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHh
Confidence 999999999999975 347889999999999998866 88899999998653
No 4
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=2.2e-49 Score=373.35 Aligned_cols=257 Identities=29% Similarity=0.569 Sum_probs=218.3
Q ss_pred hHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCC-CCCCchhHHHhhccCCCCceEEEEeC
Q 042362 31 NKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYT-DNNDDTKIMDWLSRKEPSSVVYVSFG 109 (294)
Q Consensus 31 ~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~-~~~~~~~~~~wl~~~~~~~vVyvs~G 109 (294)
.+.+..+.+.+ ++.+|+|||.|||++++++++..+++++++|||+....... ....+.+|.+|||.+++++|||||||
T Consensus 182 ~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfG 260 (446)
T PLN00414 182 LFGLITKGLKN-CDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFG 260 (446)
T ss_pred HHHHHHHhhcc-CCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeec
Confidence 55566677777 99999999999999999999886666899999997532111 11124579999999999999999999
Q ss_pred CCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEec
Q 042362 110 SEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSH 189 (294)
Q Consensus 110 S~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItH 189 (294)
|....+.+++.+++.+|+.++.+|+|+++...+.. +....+|++|.+|+ .++++++.+|+||..||+|+++++||||
T Consensus 261 S~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~-~~~~~lp~~f~~r~--~~~g~vv~~w~PQ~~vL~h~~v~~fvtH 337 (446)
T PLN00414 261 TQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSS-TVQEALPEGFEERV--KGRGIVWEGWVEQPLILSHPSVGCFVNH 337 (446)
T ss_pred ccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcc-cchhhCChhHHHHh--cCCCeEEeccCCHHHHhcCCccceEEec
Confidence 99999999999999999999999999998643221 22346999999999 8999999999999999999999999999
Q ss_pred CCchHHHHHHHhCCcEEeeccccchHhHHHHHH-HhCcEEEecccccCCcccHHHHHHHHHHHHcC--CccHHHHHHHHH
Q 042362 190 CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVA-DIGVGLEVPREEINQRVRKKDLARVIKQVVEQ--EEGQQIKRKAKE 266 (294)
Q Consensus 190 gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~-~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~--~~~~~~r~~a~~ 266 (294)
|||||++||+++|||||+||+++||+.||++++ +.|+|+.+.+++ .+.+++++|+++|+++|.+ ++++.+|+++++
T Consensus 338 ~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~-~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 338 CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRED-SGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKK 416 (446)
T ss_pred CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecccc-CCccCHHHHHHHHHHHhcCChhhHHHHHHHHHH
Confidence 999999999999999999999999999999997 469999996421 2358999999999999975 346789999999
Q ss_pred HHHHHHhcC--cHHHHHHHHHHHhhccC
Q 042362 267 LSESIKKKG--DDEEINVVEKLLQLVKA 292 (294)
Q Consensus 267 l~~~~~~~~--~~~~~~~v~~l~~~~~~ 292 (294)
+++.+.+.| ...+++||+++.+...+
T Consensus 417 ~~~~~~~~gg~ss~l~~~v~~~~~~~~~ 444 (446)
T PLN00414 417 LKETLVSPGLLSGYADKFVEALENEVNN 444 (446)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHhccc
Confidence 999997744 66799999999776554
No 5
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.6e-49 Score=372.30 Aligned_cols=242 Identities=32% Similarity=0.558 Sum_probs=206.9
Q ss_pred HhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCC-C-CCCCCchhHHHhhccCCCCceEEEEeCCCccCC
Q 042362 38 AIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPV-Y-TDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLS 115 (294)
Q Consensus 38 ~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~-~-~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~ 115 (294)
.+.+ ++.+|+|||+|||++++++++..+++++++|||+..... . +....+.+|.+|||++++++||||||||...++
T Consensus 200 ~~~~-~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~ 278 (451)
T PLN02410 200 DKRT-ASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALME 278 (451)
T ss_pred hccc-CCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCC
Confidence 3445 999999999999999999998877678999999964321 1 111234578999999998999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHH
Q 042362 116 QEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGST 195 (294)
Q Consensus 116 ~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~ 195 (294)
.+++.+++.+|+.++.+|||+++.......+....||++|.+|+ .+++ ++.+|+||.+||+|+++++|||||||||+
T Consensus 279 ~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~--~~~g-~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~ 355 (451)
T PLN02410 279 INEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKII--SGRG-YIVKWAPQKEVLSHPAVGGFWSHCGWNST 355 (451)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhc--cCCe-EEEccCCHHHHhCCCccCeeeecCchhHH
Confidence 99999999999999999999998532111122235899999998 6655 45599999999999999999999999999
Q ss_pred HHHHHhCCcEEeeccccchHhHHHHHHHh-CcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh-
Q 042362 196 VEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK- 273 (294)
Q Consensus 196 ~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~- 273 (294)
+||+++|||||++|+++||+.||+++++. |+|+.+. +.+++++|+++|+++|.++++++||++++++++.++.
T Consensus 356 ~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-----~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a 430 (451)
T PLN02410 356 LESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-----GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRAS 430 (451)
T ss_pred HHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-----CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987 9999995 4689999999999999876678999999999999985
Q ss_pred ---cC--cHHHHHHHHHHHh
Q 042362 274 ---KG--DDEEINVVEKLLQ 288 (294)
Q Consensus 274 ---~~--~~~~~~~v~~l~~ 288 (294)
+| ..++++||+.+..
T Consensus 431 ~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 431 VISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred hcCCCCHHHHHHHHHHHHHh
Confidence 44 8889999998864
No 6
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=8.4e-49 Score=370.88 Aligned_cols=271 Identities=30% Similarity=0.561 Sum_probs=223.7
Q ss_pred CCChhHHhh-hhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhh--c----CCCeEeeCCCCCCCC
Q 042362 9 DLPESEIQK-MTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYI--T----KKETIPVGPLVQEPV 81 (294)
Q Consensus 9 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~--~----~~~~~~VGpl~~~~~ 81 (294)
.++.+++|. +.. . ...+...+.+....+.+ ++.+|+|||+|||++++++++.. + .+++++|||++....
T Consensus 170 ~l~~~dlp~~~~~-~--~~~~~~~~~~~~~~~~~-a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~ 245 (481)
T PLN02992 170 PVRFEDTLDAYLV-P--DEPVYRDFVRHGLAYPK-ADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQ 245 (481)
T ss_pred ccCHHHhhHhhcC-C--CcHHHHHHHHHHHhccc-CCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcC
Confidence 377888886 322 1 12334455566666776 99999999999999999998652 1 257999999975421
Q ss_pred CCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCC--------------ccch
Q 042362 82 YTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEG--------------KFTI 147 (294)
Q Consensus 82 ~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~--------------~~~~ 147 (294)
....+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++..... .++.
T Consensus 246 --~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~ 323 (481)
T PLN02992 246 --SSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNT 323 (481)
T ss_pred --CCcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccch
Confidence 112456799999999889999999999999999999999999999999999999743210 0112
Q ss_pred hccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHH-HhCc
Q 042362 148 EEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVA-DIGV 226 (294)
Q Consensus 148 ~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~-~~G~ 226 (294)
.+.+|++|.+|+ .++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++++ +.|+
T Consensus 324 ~~~lp~~f~eR~--~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~ 401 (481)
T PLN02992 324 PEYLPEGFVSRT--HDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGI 401 (481)
T ss_pred hhhCCHHHHHHh--cCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCe
Confidence 345899999999 8999999999999999999999999999999999999999999999999999999999995 7899
Q ss_pred EEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh------cC--cHHHHHHHHHHHhh
Q 042362 227 GLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK------KG--DDEEINVVEKLLQL 289 (294)
Q Consensus 227 G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~------~~--~~~~~~~v~~l~~~ 289 (294)
|+.+... .+.++.++|.++|+++|.+++++++|++++++++.++. +| ..++++|++++.+.
T Consensus 402 gv~~~~~--~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~ 470 (481)
T PLN02992 402 AVRSDDP--KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRF 470 (481)
T ss_pred eEEecCC--CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHH
Confidence 9999641 14689999999999999877778999999999998863 34 77899999888763
No 7
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=3.1e-48 Score=365.35 Aligned_cols=271 Identities=31% Similarity=0.538 Sum_probs=218.3
Q ss_pred CCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhc------CCCeEeeCCCCCCCCC
Q 042362 9 DLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYIT------KKETIPVGPLVQEPVY 82 (294)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~------~~~~~~VGpl~~~~~~ 82 (294)
.++.+++|.+..... ......++ +..+.+.+ ++.+|+|||+|||++++++++..+ .+++++|||++....
T Consensus 174 ~l~~~dlp~~~~~~~-~~~~~~~~-~~~~~~~~-a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~- 249 (470)
T PLN03015 174 PVGPKELMETMLDRS-DQQYKECV-RSGLEVPM-SDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNV- 249 (470)
T ss_pred CCChHHCCHhhcCCC-cHHHHHHH-HHHHhccc-CCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCcc-
Confidence 488899997332111 01111122 33334666 999999999999999999998752 246999999985321
Q ss_pred CCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCC-------CccchhccCChhh
Q 042362 83 TDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSE-------GKFTIEEALPQSF 155 (294)
Q Consensus 83 ~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~-------~~~~~~~~lp~~~ 155 (294)
....+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.+.. +..+..+.+|++|
T Consensus 250 -~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f 328 (470)
T PLN03015 250 -HVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGF 328 (470)
T ss_pred -cccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHH
Confidence 11234579999999999999999999999999999999999999999999999974311 0112334699999
Q ss_pred HHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHH-HhCcEEEecccc
Q 042362 156 SKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVA-DIGVGLEVPREE 234 (294)
Q Consensus 156 ~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~-~~G~G~~l~~~~ 234 (294)
.+|+ .++++++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++++ ..|+|+.+....
T Consensus 329 ~er~--~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~ 406 (470)
T PLN03015 329 LDRT--RGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELP 406 (470)
T ss_pred HHhh--ccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccc
Confidence 9999 8899999999999999999999999999999999999999999999999999999999995 569999995211
Q ss_pred cCCcccHHHHHHHHHHHHcC--CccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHH
Q 042362 235 INQRVRKKDLARVIKQVVEQ--EEGQQIKRKAKELSESIKK----KG--DDEEINVVEKL 286 (294)
Q Consensus 235 ~~~~~t~~~l~~ai~~vl~~--~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l 286 (294)
..+.+++++|.++|+++|.+ ++++++|+||+++++.++. +| ..+++++++.+
T Consensus 407 ~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~ 466 (470)
T PLN03015 407 SEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRC 466 (470)
T ss_pred cCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhc
Confidence 12468999999999999962 5688999999999999876 34 77888888775
No 8
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=2.1e-48 Score=366.15 Aligned_cols=256 Identities=28% Similarity=0.523 Sum_probs=210.6
Q ss_pred CCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcC-CCeEeeCCCCCCCCCC-C-C
Q 042362 9 DLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITK-KETIPVGPLVQEPVYT-D-N 85 (294)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~-~~~~~VGpl~~~~~~~-~-~ 85 (294)
.++.+++|.|..... ......+.+....+.+ ++.+|+|||+|||++++++++.... +++++|||++...... . .
T Consensus 178 ~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~-~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~~ 254 (451)
T PLN03004 178 PMKGSDMPKAVLERD--DEVYDVFIMFGKQLSK-SSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRND 254 (451)
T ss_pred CCChHHCchhhcCCc--hHHHHHHHHHHHhhcc-cCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCcccccccc
Confidence 378888888554322 1223345566667777 8999999999999999999987543 5899999997432101 1 1
Q ss_pred CCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCcc---chhccCChhhHHhhhcC
Q 042362 86 NDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKF---TIEEALPQSFSKEIQGN 162 (294)
Q Consensus 86 ~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~---~~~~~lp~~~~~~~~~~ 162 (294)
..+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++....... +....+|++|.+|+ .
T Consensus 255 ~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~--~ 332 (451)
T PLN03004 255 NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRT--E 332 (451)
T ss_pred chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhc--c
Confidence 123569999999998999999999999999999999999999999999999985311100 12234899999999 8
Q ss_pred CCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHH-hCcEEEecccccCCcccH
Q 042362 163 NKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD-IGVGLEVPREEINQRVRK 241 (294)
Q Consensus 163 ~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~~~~~t~ 241 (294)
++|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++ .|+|+.+...+ .+.+++
T Consensus 333 ~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~-~~~~~~ 411 (451)
T PLN03004 333 DKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESE-TGFVSS 411 (451)
T ss_pred CCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCc-CCccCH
Confidence 9999999999999999999999999999999999999999999999999999999999986 59999997421 136799
Q ss_pred HHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh
Q 042362 242 KDLARVIKQVVEQEEGQQIKRKAKELSESIKK 273 (294)
Q Consensus 242 ~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 273 (294)
++|.++|+++|. +++||+++++++++.+.
T Consensus 412 e~l~~av~~vm~---~~~~r~~a~~~~~~a~~ 440 (451)
T PLN03004 412 TEVEKRVQEIIG---ECPVRERTMAMKNAAEL 440 (451)
T ss_pred HHHHHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence 999999999997 68899999999998865
No 9
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.5e-48 Score=363.18 Aligned_cols=271 Identities=30% Similarity=0.522 Sum_probs=218.4
Q ss_pred CCCC-CCCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCC--
Q 042362 4 PFPE-FDLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEP-- 80 (294)
Q Consensus 4 ~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~-- 80 (294)
|.+. ..++..++|.|....+........+.+..+.+.+ +|.+|+|||+|||++++++++.. .++++|||+.+..
T Consensus 155 ~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~--~~v~~VGPl~~~~~~ 231 (449)
T PLN02173 155 PIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDK-ADFVLVNSFHDLDLHENELLSKV--CPVLTIGPTVPSMYL 231 (449)
T ss_pred CCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhcc-CCEEEEeCHHHhhHHHHHHHHhc--CCeeEEcccCchhhc
Confidence 3444 3378899998554322111222333344556666 99999999999999999998754 3799999996320
Q ss_pred -----C-CCCC------CCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchh
Q 042362 81 -----V-YTDN------NDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIE 148 (294)
Q Consensus 81 -----~-~~~~------~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~ 148 (294)
. .... ..+++|..||+.+++++||||||||...++.+++.+++.+| ++.+|||+++... .
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~------~ 303 (449)
T PLN02173 232 DQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASE------E 303 (449)
T ss_pred cccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccc------h
Confidence 0 0000 12346999999999999999999999999999999999999 8889999997421 2
Q ss_pred ccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHh-CcE
Q 042362 149 EALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVG 227 (294)
Q Consensus 149 ~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-G~G 227 (294)
..+|++|.+|+ .++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++. |+|
T Consensus 304 ~~lp~~~~~~~--~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~G 381 (449)
T PLN02173 304 SKLPPGFLETV--DKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVG 381 (449)
T ss_pred hcccchHHHhh--cCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCce
Confidence 34889999988 778888899999999999999999999999999999999999999999999999999999986 999
Q ss_pred EEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHH
Q 042362 228 LEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLL 287 (294)
Q Consensus 228 ~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~ 287 (294)
+.+..++....++.++|.++|+++|.+++++++|+||+++++.+++ +| ..++++||+++.
T Consensus 382 v~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 382 VRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred EEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 9986422123479999999999999877778999999999999984 55 778999998874
No 10
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=1.2e-47 Score=362.35 Aligned_cols=269 Identities=26% Similarity=0.520 Sum_probs=217.7
Q ss_pred CCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhh-hcCCCeEeeCCCCCCCCCCCC--
Q 042362 9 DLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSY-ITKKETIPVGPLVQEPVYTDN-- 85 (294)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~-~~~~~~~~VGpl~~~~~~~~~-- 85 (294)
.++.+++|.|....+ +...+.+....+.+ ++++|+|||++||++++++++. ...+++++|||+.........
T Consensus 183 ~l~~~dlp~~~~~~~----~~~~~~~~~~~~~~-~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~ 257 (468)
T PLN02207 183 PVPANVLPSALFVED----GYDAYVKLAILFTK-ANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQ 257 (468)
T ss_pred CCChHHCcchhcCCc----cHHHHHHHHHhccc-CCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCcc
Confidence 488999998543211 23344555666766 9999999999999999998854 233589999999753210111
Q ss_pred --CCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCC
Q 042362 86 --NDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNN 163 (294)
Q Consensus 86 --~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 163 (294)
..+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++..... ..+.+|++|.+|+ .+
T Consensus 258 ~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~---~~~~lp~~f~er~--~~ 332 (468)
T PLN02207 258 DLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVT---NDDLLPEGFLDRV--SG 332 (468)
T ss_pred ccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCcc---ccccCCHHHHhhc--CC
Confidence 1235799999999889999999999999999999999999999999999999843211 1235899999988 55
Q ss_pred CCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHH-hCcEEEecccc---cCCcc
Q 042362 164 KGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD-IGVGLEVPREE---INQRV 239 (294)
Q Consensus 164 ~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~G~G~~l~~~~---~~~~~ 239 (294)
++ ++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++ .|+|+.+..+. ..+.+
T Consensus 333 ~g-~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v 411 (468)
T PLN02207 333 RG-MICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIV 411 (468)
T ss_pred Ce-EEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcc
Confidence 55 556999999999999999999999999999999999999999999999999998887 79999874210 01356
Q ss_pred cHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHHhh
Q 042362 240 RKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQL 289 (294)
Q Consensus 240 t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~~~ 289 (294)
+.++|.++|+++|. +++++||+||+++++++++ +| ..++++||+++...
T Consensus 412 ~~e~i~~av~~vm~-~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 412 NANEIETAIRCVMN-KDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred cHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 99999999999996 3478999999999999985 44 88899999988754
No 11
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.1e-47 Score=363.91 Aligned_cols=275 Identities=31% Similarity=0.515 Sum_probs=218.7
Q ss_pred CCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCC--C---
Q 042362 9 DLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVY--T--- 83 (294)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~--~--- 83 (294)
.++.+++|.|....+........+.+..+.+.+ ++.+|+|||+|||++++++++... ++++|||+...... .
T Consensus 181 ~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~-a~~vlvNTf~eLE~~~~~~l~~~~--~v~~iGPl~~~~~~~~~~~~ 257 (480)
T PLN02555 181 LLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDK-PFCILIDTFQELEKEIIDYMSKLC--PIKPVGPLFKMAKTPNSDVK 257 (480)
T ss_pred CcCHhhCcccccCCCCchHHHHHHHHHHHhccc-CCEEEEEchHHHhHHHHHHHhhCC--CEEEeCcccCcccccccccc
Confidence 478899998543211111112233444455666 899999999999999999987644 39999999643210 1
Q ss_pred C--CCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhc
Q 042362 84 D--NNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQG 161 (294)
Q Consensus 84 ~--~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~ 161 (294)
. ...+.+|.+||+++++++||||||||+..++.+++.+++.+|+.++++|||+++............+|++|.+++
T Consensus 258 ~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~-- 335 (480)
T PLN02555 258 GDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKA-- 335 (480)
T ss_pred ccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhc--
Confidence 1 123567999999998889999999999999999999999999999999999987431110001135888898876
Q ss_pred CCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHh-CcEEEecccc-cCCcc
Q 042362 162 NNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVGLEVPREE-INQRV 239 (294)
Q Consensus 162 ~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-G~G~~l~~~~-~~~~~ 239 (294)
.+. .++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++. |+|+.+.+.+ ..+.+
T Consensus 336 ~~~-g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v 414 (480)
T PLN02555 336 GDK-GKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLI 414 (480)
T ss_pred CCc-eEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcC
Confidence 444 46679999999999999999999999999999999999999999999999999999987 9999995311 02468
Q ss_pred cHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHHhh
Q 042362 240 RKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQL 289 (294)
Q Consensus 240 t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~~~ 289 (294)
++++|.++|+++|.+++++++|+||++|+++++. +| ..++++||+++.+.
T Consensus 415 ~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 415 TREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred cHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 9999999999999877788999999999999765 45 88899999999764
No 12
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.7e-47 Score=364.08 Aligned_cols=276 Identities=26% Similarity=0.474 Sum_probs=223.0
Q ss_pred CChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhc------CCCeEeeCCCCCCC-CC
Q 042362 10 LPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYIT------KKETIPVGPLVQEP-VY 82 (294)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~------~~~~~~VGpl~~~~-~~ 82 (294)
++.+++|.+....+ ......+.+..+.+.+ ++.+|+|||+|||++++++++... .+++++|||+.... ..
T Consensus 177 l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~~~ 253 (480)
T PLN00164 177 VPASSLPAPVMDKK--SPNYAWFVYHGRRFME-AAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAFTP 253 (480)
T ss_pred CChHHCCchhcCCC--cHHHHHHHHHHHhhhh-cCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCccccccC
Confidence 78889998433221 1112334444566666 999999999999999999997642 14799999997421 11
Q ss_pred CCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCC------ccchhccCChhhH
Q 042362 83 TDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEG------KFTIEEALPQSFS 156 (294)
Q Consensus 83 ~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~------~~~~~~~lp~~~~ 156 (294)
.....+.+|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++..... ..+....+|++|.
T Consensus 254 ~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~ 333 (480)
T PLN00164 254 PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFL 333 (480)
T ss_pred CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHH
Confidence 1123457899999999999999999999988999999999999999999999999853210 1112345899999
Q ss_pred HhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHH-hCcEEEeccccc
Q 042362 157 KEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD-IGVGLEVPREEI 235 (294)
Q Consensus 157 ~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~ 235 (294)
+|+ .++++++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++ .|+|+.+..++.
T Consensus 334 ~~~--~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 334 ERT--KGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred HHh--cCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 999 89999999999999999999999999999999999999999999999999999999998865 699999853210
Q ss_pred -CCcccHHHHHHHHHHHHcCC--ccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHHhhc
Q 042362 236 -NQRVRKKDLARVIKQVVEQE--EGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQLV 290 (294)
Q Consensus 236 -~~~~t~~~l~~ai~~vl~~~--~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~~~~ 290 (294)
.+.+++++|.++|+++|.++ +++.+|++|+++++.+++ +| ..++++||+++.+.+
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHGA 475 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 13579999999999999753 478899999999999876 44 888999999998653
No 13
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=4.6e-47 Score=360.19 Aligned_cols=276 Identities=27% Similarity=0.545 Sum_probs=218.7
Q ss_pred CCCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCC-----
Q 042362 8 FDLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVY----- 82 (294)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~----- 82 (294)
+.++.+++|.+.. + ..+...+.+......+.++.+|+|||.|||++++++++..+++++++|||+......
T Consensus 185 ~~l~~~dlp~~~~--~--~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~ 260 (491)
T PLN02534 185 IEITRAQLPGAFV--S--LPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKF 260 (491)
T ss_pred ccccHHHCChhhc--C--cccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECccccccccccccc
Confidence 4588888887421 1 111222222233233337899999999999999999987776789999999642110
Q ss_pred --C-CCC-CchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHh
Q 042362 83 --T-DNN-DDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKE 158 (294)
Q Consensus 83 --~-~~~-~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~ 158 (294)
. ... .+.+|..|||.+++++||||||||....+.+++.+++.+|+.++.+|||+++............+|++|.++
T Consensus 261 ~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~ 340 (491)
T PLN02534 261 ERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEER 340 (491)
T ss_pred ccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHh
Confidence 0 011 235699999999999999999999999999999999999999999999999843111111112468999998
Q ss_pred hhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHh-CcEEEeccc----
Q 042362 159 IQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVGLEVPRE---- 233 (294)
Q Consensus 159 ~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-G~G~~l~~~---- 233 (294)
+ .++|+++.+|+||..||+|+++++|||||||||++||+++|||||++|+++||+.||+++++. |+|+++...
T Consensus 341 ~--~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~ 418 (491)
T PLN02534 341 I--KGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVR 418 (491)
T ss_pred h--ccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccccccc
Confidence 8 788999999999999999999999999999999999999999999999999999999999865 999988411
Q ss_pred --ccC--C-cccHHHHHHHHHHHHc--CCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHHhh
Q 042362 234 --EIN--Q-RVRKKDLARVIKQVVE--QEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQL 289 (294)
Q Consensus 234 --~~~--~-~~t~~~l~~ai~~vl~--~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~~~ 289 (294)
+.. + .+++++|.++|+++|. +|+++++|+||++|++++++ +| ..++++||+++.+.
T Consensus 419 ~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~ 487 (491)
T PLN02534 419 WGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQ 487 (491)
T ss_pred ccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 001 1 4899999999999997 46688999999999999876 45 88899999998753
No 14
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.8e-47 Score=360.18 Aligned_cols=275 Identities=29% Similarity=0.494 Sum_probs=219.6
Q ss_pred CCCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcC-CCeEeeCCCCCCCCCC---
Q 042362 8 FDLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITK-KETIPVGPLVQEPVYT--- 83 (294)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~-~~~~~VGpl~~~~~~~--- 83 (294)
..++.+++|.|.............+.+....... ++.+|+|||++||++++++++..+. +++++|||++......
T Consensus 181 ~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~~ 259 (477)
T PLN02863 181 PKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIA-SWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGL 259 (477)
T ss_pred CCcChHhCchhhhccCccchHHHHHHHHHhhhcc-CCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccccc
Confidence 3477788887443221112222233333333444 7899999999999999999987664 5899999997432100
Q ss_pred ----C--CCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHH
Q 042362 84 ----D--NNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSK 157 (294)
Q Consensus 84 ----~--~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~ 157 (294)
. ...+++|..||+.+++++||||||||....+.+++.+++.+|+.++++|||+++....... ....+|++|.+
T Consensus 260 ~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~-~~~~lp~~~~~ 338 (477)
T PLN02863 260 MERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEES-DYSNIPSGFED 338 (477)
T ss_pred cccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCccccc-chhhCCHHHHH
Confidence 0 1124579999999998999999999999999999999999999999999999975321111 12358999999
Q ss_pred hhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHH-hCcEEEecccccC
Q 042362 158 EIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD-IGVGLEVPREEIN 236 (294)
Q Consensus 158 ~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~~ 236 (294)
|+ .++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++ .|+|+++.++. .
T Consensus 339 r~--~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~-~ 415 (477)
T PLN02863 339 RV--AGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA-D 415 (477)
T ss_pred Hh--ccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC-C
Confidence 99 78899999999999999999999999999999999999999999999999999999999875 59999995321 2
Q ss_pred CcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHHhh
Q 042362 237 QRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQL 289 (294)
Q Consensus 237 ~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~~~ 289 (294)
..++.+++.++|+++|.+ +++||+||+++++.+++ +| ..++++||+.+...
T Consensus 416 ~~~~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 416 TVPDSDELARVFMESVSE--NQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred CCcCHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 356899999999999942 68999999999998655 45 88999999999875
No 15
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=1.3e-46 Score=359.02 Aligned_cols=274 Identities=31% Similarity=0.548 Sum_probs=217.6
Q ss_pred CCCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCC-----
Q 042362 8 FDLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVY----- 82 (294)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~----- 82 (294)
+.++.++++.+ +....-..++....+.+.+ ++.+++|||++||+++++++++....++++|||+......
T Consensus 188 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~ 262 (482)
T PLN03007 188 IVITEEQINDA----DEESPMGKFMKEVRESEVK-SFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKA 262 (482)
T ss_pred cccCHHhcCCC----CCchhHHHHHHHHHhhccc-CCEEEEECHHHHHHHHHHHHHhccCCCEEEEcccccccccccccc
Confidence 45666666642 1111112234444455666 8999999999999999999987766689999998542110
Q ss_pred ----CCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHh
Q 042362 83 ----TDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKE 158 (294)
Q Consensus 83 ----~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~ 158 (294)
.....+.+|.+||+.+++++||||||||....+.+++.+++.+|+.++++|||+++...... +....+|++|.+|
T Consensus 263 ~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~-~~~~~lp~~~~~r 341 (482)
T PLN03007 263 ERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQG-EKEEWLPEGFEER 341 (482)
T ss_pred ccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCccc-chhhcCCHHHHHH
Confidence 01112467999999998899999999999988899999999999999999999998542111 1223589999999
Q ss_pred hhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHh-CcEEEecccc---
Q 042362 159 IQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVGLEVPREE--- 234 (294)
Q Consensus 159 ~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-G~G~~l~~~~--- 234 (294)
+ .++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++. ++|+.+..+.
T Consensus 342 ~--~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 419 (482)
T PLN03007 342 T--KGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVK 419 (482)
T ss_pred h--ccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccc
Confidence 9 889999999999999999999999999999999999999999999999999999999998753 5555442110
Q ss_pred -cCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHHhh
Q 042362 235 -INQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQL 289 (294)
Q Consensus 235 -~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~~~ 289 (294)
....+++++|.++|+++|.++++++||+||+++++.+++ +| ..++++||+.+.++
T Consensus 420 ~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 420 VKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred cccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 024689999999999999876677999999999999976 34 88899999998764
No 16
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=2e-46 Score=354.24 Aligned_cols=258 Identities=23% Similarity=0.424 Sum_probs=210.4
Q ss_pred CChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhh----cCCCeEeeCCCCCCCCC---
Q 042362 10 LPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYI----TKKETIPVGPLVQEPVY--- 82 (294)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~----~~~~~~~VGpl~~~~~~--- 82 (294)
++.+|+|+|.....+.......+.+..+.+.+ ++.+|+|||.|||++++++.... ..+++++|||+......
T Consensus 174 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~~~ 252 (448)
T PLN02562 174 LSTEDLPWLIGTPKARKARFKFWTRTLERTKS-LRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATTIT 252 (448)
T ss_pred CChhhCcchhcCCCcchHHHHHHHHHHhcccc-CCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccccC
Confidence 78889998543222112234556666677777 89999999999999998876532 23589999999754210
Q ss_pred CC--CCCchhHHHhhccCCCCceEEEEeCCCc-cCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhh
Q 042362 83 TD--NNDDTKIMDWLSRKEPSSVVYVSFGSEY-FLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEI 159 (294)
Q Consensus 83 ~~--~~~~~~~~~wl~~~~~~~vVyvs~GS~~-~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~ 159 (294)
.. ...+.+|.+||+++++++||||||||.. ..+.+++++++.+|+.++++|||+++... ...+|++|.+++
T Consensus 253 ~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~------~~~l~~~~~~~~ 326 (448)
T PLN02562 253 KPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVW------REGLPPGYVERV 326 (448)
T ss_pred CCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCc------hhhCCHHHHHHh
Confidence 01 1234578899999988899999999976 57889999999999999999999986421 124888898887
Q ss_pred hcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHh-CcEEEecccccCCc
Q 042362 160 QGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVGLEVPREEINQR 238 (294)
Q Consensus 160 ~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-G~G~~l~~~~~~~~ 238 (294)
. .|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++. |+|+.+. .
T Consensus 327 --~-~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~------~ 397 (448)
T PLN02562 327 --S-KQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS------G 397 (448)
T ss_pred --c-cCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC------C
Confidence 4 3556679999999999999999999999999999999999999999999999999999875 9998883 3
Q ss_pred ccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh---cC--cHHHHHHHHHH
Q 042362 239 VRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK---KG--DDEEINVVEKL 286 (294)
Q Consensus 239 ~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~---~~--~~~~~~~v~~l 286 (294)
++.++|.++|+++|. +++||+||+++++.++. +| ..++++||+++
T Consensus 398 ~~~~~l~~~v~~~l~---~~~~r~~a~~l~~~~~~~~~gGSS~~nl~~~v~~~ 447 (448)
T PLN02562 398 FGQKEVEEGLRKVME---DSGMGERLMKLRERAMGEEARLRSMMNFTTLKDEL 447 (448)
T ss_pred CCHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Confidence 789999999999997 68999999999998866 24 77899999876
No 17
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.8e-46 Score=356.04 Aligned_cols=269 Identities=31% Similarity=0.558 Sum_probs=212.8
Q ss_pred CChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhc--CCCeEeeCCCCCCCCC---CC
Q 042362 10 LPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYIT--KKETIPVGPLVQEPVY---TD 84 (294)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~--~~~~~~VGpl~~~~~~---~~ 84 (294)
++.+++|.+.... .....+.+..+.+.+ ++.+|+|||++||++++++++... -+++++|||+...... ..
T Consensus 188 l~~~dlp~~~~~~----~~~~~~~~~~~~~~~-a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~ 262 (475)
T PLN02167 188 VPTKVLPPGLFMK----ESYEAWVEIAERFPE-AKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNL 262 (475)
T ss_pred CChhhCchhhhCc----chHHHHHHHHHhhcc-cCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccCCCC
Confidence 6677777633211 112234455566666 999999999999999999987641 1479999999753210 11
Q ss_pred -CCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCC
Q 042362 85 -NNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNN 163 (294)
Q Consensus 85 -~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 163 (294)
...+.+|..||+.+++++||||||||....+.+++.+++.+|+.++++|||+++............+|++|.+|+ .+
T Consensus 263 ~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~--~~ 340 (475)
T PLN02167 263 DSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRV--MG 340 (475)
T ss_pred CcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHh--cc
Confidence 112367999999998899999999999888999999999999999999999998532111111235899999999 77
Q ss_pred CCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHH-HHHhCcEEEeccc---ccCCcc
Q 042362 164 KGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKM-VADIGVGLEVPRE---EINQRV 239 (294)
Q Consensus 164 ~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~-v~~~G~G~~l~~~---~~~~~~ 239 (294)
+++ +.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++ ++..|+|+.+... +....+
T Consensus 341 rg~-v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~ 419 (475)
T PLN02167 341 RGL-VCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIV 419 (475)
T ss_pred Cee-eeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcc
Confidence 664 45999999999999999999999999999999999999999999999999987 5678999998631 001357
Q ss_pred cHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHHh
Q 042362 240 RKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQ 288 (294)
Q Consensus 240 t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~~ 288 (294)
++++|.++|+++|.+ ++.||+||+++++.++. +| ..++++||+++..
T Consensus 420 ~~~~l~~av~~~m~~--~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 420 KADEIAGAVRSLMDG--EDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLG 472 (475)
T ss_pred cHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 999999999999974 24899999999998876 44 8889999998875
No 18
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.6e-46 Score=355.80 Aligned_cols=272 Identities=30% Similarity=0.520 Sum_probs=215.4
Q ss_pred CCChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhh--cCCCeEeeCCCCC-CCCCCC-
Q 042362 9 DLPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYI--TKKETIPVGPLVQ-EPVYTD- 84 (294)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~--~~~~~~~VGpl~~-~~~~~~- 84 (294)
.++.+++|.+.... .....+.+..+.+.+ ++.+|+|||.+||+.+.+++.+. ..+++++|||+.. ......
T Consensus 182 pl~~~dlp~~~~~~----~~~~~~~~~~~~~~~-~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~ 256 (481)
T PLN02554 182 PYPVKCLPSVLLSK----EWLPLFLAQARRFRE-MKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSGDDS 256 (481)
T ss_pred CCCHHHCCCcccCH----HHHHHHHHHHHhccc-CCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCcccccccccc
Confidence 46777777633211 122345555666777 99999999999999999988763 2358999999943 211011
Q ss_pred -CCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCC--------CccchhccCChhh
Q 042362 85 -NNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSE--------GKFTIEEALPQSF 155 (294)
Q Consensus 85 -~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~--------~~~~~~~~lp~~~ 155 (294)
...+.+|.+||+++++++||||||||...++.+++.+++.+|+.++++|||+++.... ...+....+|++|
T Consensus 257 ~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~ 336 (481)
T PLN02554 257 KDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGF 336 (481)
T ss_pred ccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHH
Confidence 2245689999999988899999999998889999999999999999999999975311 0011223479999
Q ss_pred HHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHH-HHHhCcEEEeccc-
Q 042362 156 SKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKM-VADIGVGLEVPRE- 233 (294)
Q Consensus 156 ~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~-v~~~G~G~~l~~~- 233 (294)
.+|+ .+++ ++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++ +++.|+|+.+.+.
T Consensus 337 ~~r~--~~~g-~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~ 413 (481)
T PLN02554 337 LDRT--KDIG-KVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYW 413 (481)
T ss_pred HHHh--ccCc-eEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccc
Confidence 9988 5554 556999999999999999999999999999999999999999999999999954 6778999998631
Q ss_pred ------ccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHHhhc
Q 042362 234 ------EINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQLV 290 (294)
Q Consensus 234 ------~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~~~~ 290 (294)
.....+++++|.++|+++|.+ +++||+||+++++.++. +| ..++++||+++.+..
T Consensus 414 ~~~~~~~~~~~~~~e~l~~av~~vm~~--~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~~ 480 (481)
T PLN02554 414 RGDLLAGEMETVTAEEIERGIRCLMEQ--DSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKNI 480 (481)
T ss_pred cccccccccCeEcHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhhC
Confidence 002468999999999999963 47999999999999985 34 888999999998753
No 19
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=3.8e-46 Score=351.28 Aligned_cols=270 Identities=26% Similarity=0.481 Sum_probs=209.8
Q ss_pred CCChhHHhhhhhhhcccCCCcchHHHHHHHhhc-cccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCC----CC-
Q 042362 9 DLPESEIQKMTQFKHRIVNGTENKDRFLKAIDL-SCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEP----VY- 82 (294)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~----~~- 82 (294)
.++.+++|.|......+......+.+..+.+.+ .++.+|+|||++||++++++++. .++++|||+.... ..
T Consensus 162 ~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~~v~~VGPL~~~~~~~~~~~ 238 (455)
T PLN02152 162 SLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---IEMVAVGPLLPAEIFTGSES 238 (455)
T ss_pred CCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---CCEEEEcccCcccccccccc
Confidence 478999999654322112113345555565533 25799999999999999998865 2699999997431 10
Q ss_pred CC----CCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCC-----ccch-hccCC
Q 042362 83 TD----NNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEG-----KFTI-EEALP 152 (294)
Q Consensus 83 ~~----~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~-----~~~~-~~~lp 152 (294)
.. ...+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++..... ..+. ...+|
T Consensus 239 ~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~ 318 (455)
T PLN02152 239 GKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKI 318 (455)
T ss_pred CccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccc
Confidence 00 12245799999999888999999999999999999999999999999999999853110 0000 01257
Q ss_pred hhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHh-CcEEEec
Q 042362 153 QSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVGLEVP 231 (294)
Q Consensus 153 ~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-G~G~~l~ 231 (294)
++|.+|+ .+++ ++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++. |+|+.+.
T Consensus 319 ~~f~e~~--~~~g-~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~ 395 (455)
T PLN02152 319 AGFRHEL--EEVG-MIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVR 395 (455)
T ss_pred hhHHHhc--cCCe-EEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEee
Confidence 8898887 5444 5669999999999999999999999999999999999999999999999999999984 6666664
Q ss_pred ccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHH
Q 042362 232 REEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKL 286 (294)
Q Consensus 232 ~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l 286 (294)
.+. .+.+++++|.++|+++|+ +++.+||+||+++++++++ +| ..+++++|+++
T Consensus 396 ~~~-~~~~~~e~l~~av~~vm~-~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 396 ENS-EGLVERGEIRRCLEAVME-EKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred cCc-CCcCcHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 321 245799999999999996 3466899999999998876 34 77889999876
No 20
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=6.8e-46 Score=351.03 Aligned_cols=264 Identities=29% Similarity=0.512 Sum_probs=209.5
Q ss_pred CChhHHhhhhhhhcccCCCc-chHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCC---CCC--
Q 042362 10 LPESEIQKMTQFKHRIVNGT-ENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEP---VYT-- 83 (294)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~---~~~-- 83 (294)
++.+++|.+.... +...+ ....++.+...+ ++.+++|||++||++++++++. . +++++|||++... ...
T Consensus 169 ~~~~dl~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~l~~-~-~~v~~VGPl~~~~~~~~~~~~ 243 (456)
T PLN02210 169 LEVRDLPSFMLPS--GGAHFNNLMAEFADCLRY-VKWVLVNSFYELESEIIESMAD-L-KPVIPIGPLVSPFLLGDDEEE 243 (456)
T ss_pred CChhhCChhhhcC--CchHHHHHHHHHHHhccc-CCEEEEeCHHHHhHHHHHHHhh-c-CCEEEEcccCchhhcCccccc
Confidence 6777777743321 11112 233344455555 8999999999999999999876 3 5899999997421 000
Q ss_pred --------CCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhh
Q 042362 84 --------DNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSF 155 (294)
Q Consensus 84 --------~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~ 155 (294)
....+.+|.+||+.+++++||||||||....+.+++++++.+|+.++++|||+++.... ...++.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~------~~~~~~~ 317 (456)
T PLN02210 244 TLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEK------AQNVQVL 317 (456)
T ss_pred ccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcc------ccchhhH
Confidence 01235679999999988999999999999889999999999999999999999974311 1123455
Q ss_pred HHhhhcC-CCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHH-hCcEEEeccc
Q 042362 156 SKEIQGN-NKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD-IGVGLEVPRE 233 (294)
Q Consensus 156 ~~~~~~~-~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~G~G~~l~~~ 233 (294)
.+++ . +++ ++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++ .|+|+.+...
T Consensus 318 ~~~~--~~~~g-~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 394 (456)
T PLN02210 318 QEMV--KEGQG-VVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRND 394 (456)
T ss_pred Hhhc--cCCCe-EEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEecc
Confidence 5554 3 344 566999999999999999999999999999999999999999999999999999998 7999999642
Q ss_pred ccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHH
Q 042362 234 EINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLL 287 (294)
Q Consensus 234 ~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~ 287 (294)
+..+.+++++|+++|+++|.+++++++|+||++|++.+++ +| ..++++||+.++
T Consensus 395 ~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 395 AVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred ccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 1124689999999999999877678899999999998876 44 788999998875
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.8e-43 Score=335.82 Aligned_cols=262 Identities=28% Similarity=0.492 Sum_probs=206.2
Q ss_pred CChhHHhhhhhhhcccCCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCC----C--
Q 042362 10 LPESEIQKMTQFKHRIVNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVY----T-- 83 (294)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~----~-- 83 (294)
++.+++|.+..... ......+.+....+.+ ++.+|+|||+|||++++++++..+++++++|||+...... .
T Consensus 179 l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~~~~ 255 (459)
T PLN02448 179 TRLSDLPPIFHGNS--RRVLKRILEAFSWVPK-AQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSS 255 (459)
T ss_pred CChHHCchhhcCCc--hHHHHHHHHHHhhccc-CCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCCcccc
Confidence 66777777432111 1112233344444455 7899999999999999999988777789999999753110 0
Q ss_pred -CCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcC
Q 042362 84 -DNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGN 162 (294)
Q Consensus 84 -~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 162 (294)
....+.+|..|++.++++++|||||||....+.+++++++.+|+.++++|||+++.. ..++.++.
T Consensus 256 ~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----------~~~~~~~~--- 321 (459)
T PLN02448 256 NNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE-----------ASRLKEIC--- 321 (459)
T ss_pred ccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc-----------hhhHhHhc---
Confidence 011234799999999889999999999988888999999999999999999987532 01233332
Q ss_pred CCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHh-CcEEEecccc-cCCccc
Q 042362 163 NKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVGLEVPREE-INQRVR 240 (294)
Q Consensus 163 ~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-G~G~~l~~~~-~~~~~t 240 (294)
+.+.++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++. |+|+.+..+. ....++
T Consensus 322 ~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~ 401 (459)
T PLN02448 322 GDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVG 401 (459)
T ss_pred cCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCc
Confidence 23566779999999999999999999999999999999999999999999999999999984 8888885321 023579
Q ss_pred HHHHHHHHHHHHcC--CccHHHHHHHHHHHHHHHh----cC--cHHHHHHHHHHHh
Q 042362 241 KKDLARVIKQVVEQ--EEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQ 288 (294)
Q Consensus 241 ~~~l~~ai~~vl~~--~~~~~~r~~a~~l~~~~~~----~~--~~~~~~~v~~l~~ 288 (294)
+++|+++|+++|.+ +++++||+||+++++.++. +| ..++++||+++.+
T Consensus 402 ~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 402 REEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 99999999999975 4578999999999999876 34 8889999999875
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1e-40 Score=320.92 Aligned_cols=223 Identities=27% Similarity=0.425 Sum_probs=161.2
Q ss_pred HHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCcc-
Q 042362 35 FLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYF- 113 (294)
Q Consensus 35 ~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~- 113 (294)
..+.+.+ ++++++|+.+.+|. +++.. +++.+||++...+ ..+.+.++..|++...++++|||||||...
T Consensus 220 ~~~~~~~-~~l~l~ns~~~ld~-----prp~~-p~v~~vGgl~~~~---~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~ 289 (500)
T PF00201_consen 220 FRELLSN-ASLVLINSHPSLDF-----PRPLL-PNVVEVGGLHIKP---AKPLPEELWNFLDSSGKKGVVYVSFGSIVSS 289 (500)
T ss_dssp CHHHHHH-HHHCCSSTEEE---------HHHH-CTSTTGCGC-S-------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT
T ss_pred cHHHHHH-HHHHhhhccccCcC-----Ccchh-hcccccCcccccc---ccccccccchhhhccCCCCEEEEecCcccch
Confidence 4555665 88999999888775 45544 5899999986552 345788899999985667899999999875
Q ss_pred CCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCch
Q 042362 114 LSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWG 193 (294)
Q Consensus 114 ~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~ 193 (294)
.+.+..++++++|++.+++|||+++.. .+.. .++|+++.+|+||.++|+|+++++||||||+|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~iW~~~~~----------~~~~-------l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~ 352 (500)
T PF00201_consen 290 MPEEKLKEIAEAFENLPQRFIWKYEGE----------PPEN-------LPKNVLIVKWLPQNDLLAHPRVKLFITHGGLN 352 (500)
T ss_dssp -HHHHHHHHHHHHHCSTTEEEEEETCS----------HGCH-------HHTTEEEESS--HHHHHTSTTEEEEEES--HH
T ss_pred hHHHHHHHHHHHHhhCCCccccccccc----------cccc-------ccceEEEeccccchhhhhcccceeeeeccccc
Confidence 344558899999999999999998641 1111 34588999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh
Q 042362 194 STVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK 273 (294)
Q Consensus 194 s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 273 (294)
|++||+++|||||++|+++||+.||+++++.|+|+.+++ ..+|.++|.++|+++|+ +++|++||+++++++++
T Consensus 353 s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~----~~~~~~~l~~ai~~vl~---~~~y~~~a~~ls~~~~~ 425 (500)
T PF00201_consen 353 STQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDK----NDLTEEELRAAIREVLE---NPSYKENAKRLSSLFRD 425 (500)
T ss_dssp HHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGG----GC-SHHHHHHHHHHHHH---SHHHHHHHHHHHHTTT-
T ss_pred hhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEe----cCCcHHHHHHHHHHHHh---hhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999985 67899999999999998 78999999999999999
Q ss_pred cCcHHHHHHHHHHHhhcc
Q 042362 274 KGDDEEINVVEKLLQLVK 291 (294)
Q Consensus 274 ~~~~~~~~~v~~l~~~~~ 291 (294)
++....+.++.+++...+
T Consensus 426 ~p~~p~~~~~~~ie~v~~ 443 (500)
T PF00201_consen 426 RPISPLERAVWWIEYVAR 443 (500)
T ss_dssp ------------------
T ss_pred CCCCHHHHHHHHHHHHHh
Confidence 885556666666655443
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=4.7e-39 Score=308.12 Aligned_cols=222 Identities=21% Similarity=0.293 Sum_probs=184.9
Q ss_pred HHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCcc--
Q 042362 36 LKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYF-- 113 (294)
Q Consensus 36 ~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~-- 113 (294)
.+...+ ++++|+|+.+.||. .+ .+++++++|||+..+.. ...+.++++.+|++..+ +++|||||||...
T Consensus 240 ~~l~~~-~~l~lvns~~~~d~-----~r-p~~p~v~~vGgi~~~~~-~~~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~ 310 (507)
T PHA03392 240 RELRNR-VQLLFVNVHPVFDN-----NR-PVPPSVQYLGGLHLHKK-PPQPLDDYLEEFLNNST-NGVVYVSFGSSIDTN 310 (507)
T ss_pred HHHHhC-CcEEEEecCccccC-----CC-CCCCCeeeecccccCCC-CCCCCCHHHHHHHhcCC-CcEEEEECCCCCcCC
Confidence 344444 89999999988886 44 56789999999976421 23456889999998764 4799999999864
Q ss_pred -CCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCc
Q 042362 114 -LSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGW 192 (294)
Q Consensus 114 -~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~ 192 (294)
.+.+.++.+++++++.+++|||+++... .+.+ .++|+++.+|+||.++|+|+++++||||||+
T Consensus 311 ~~~~~~~~~~l~a~~~l~~~viw~~~~~~---------~~~~-------~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~ 374 (507)
T PHA03392 311 DMDNEFLQMLLRTFKKLPYNVLWKYDGEV---------EAIN-------LPANVLTQKWFPQRAVLKHKNVKAFVTQGGV 374 (507)
T ss_pred CCCHHHHHHHHHHHHhCCCeEEEEECCCc---------Cccc-------CCCceEEecCCCHHHHhcCCCCCEEEecCCc
Confidence 4678899999999999999999986321 1101 4568999999999999999999999999999
Q ss_pred hHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHH
Q 042362 193 GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIK 272 (294)
Q Consensus 193 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~ 272 (294)
||++||+++|||||++|+++||+.||+++++.|+|+.+++ ..++.++|.++|+++|+ +++||+||+++++.++
T Consensus 375 ~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~----~~~t~~~l~~ai~~vl~---~~~y~~~a~~ls~~~~ 447 (507)
T PHA03392 375 QSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDT----VTVSAAQLVLAIVDVIE---NPKYRKNLKELRHLIR 447 (507)
T ss_pred ccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEecc----CCcCHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999975 67899999999999998 7999999999999999
Q ss_pred hcCcHHHHHHHHHHHhh
Q 042362 273 KKGDDEEINVVEKLLQL 289 (294)
Q Consensus 273 ~~~~~~~~~~v~~l~~~ 289 (294)
+++....++.+.+++..
T Consensus 448 ~~p~~~~~~av~~iE~v 464 (507)
T PHA03392 448 HQPMTPLHKAIWYTEHV 464 (507)
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 98744445555554443
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=3.1e-33 Score=268.64 Aligned_cols=218 Identities=30% Similarity=0.533 Sum_probs=167.5
Q ss_pred ccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCC--ceEEEEeCCCc---cCCHH
Q 042362 43 CKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPS--SVVYVSFGSEY---FLSQE 117 (294)
Q Consensus 43 ~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~--~vVyvs~GS~~---~~~~~ 117 (294)
++..++|+.+-++. ......+++++|||+..... .. ....+..|++..+.. ++|||||||+. .++.+
T Consensus 225 ~~~~~ln~~~~~~~-----~~~~~~~~v~~IG~l~~~~~-~~--~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~ 296 (496)
T KOG1192|consen 225 ASFIFLNSNPLLDF-----EPRPLLPKVIPIGPLHVKDS-KQ--KSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEE 296 (496)
T ss_pred CeEEEEccCcccCC-----CCCCCCCCceEECcEEecCc-cc--cccccHHHHHHHhhccCCeEEEECCcccccccCCHH
Confidence 55666666544332 12223579999999987622 11 111456677766665 89999999999 68999
Q ss_pred HHHHHHHHHhcC-CCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccc-cCCCCcceEEecCCchHH
Q 042362 118 EMNEIASGLLLS-EVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKI-LGHGSIGGFVSHCGWGST 195 (294)
Q Consensus 118 ~~~~l~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~l-L~~~~v~~~ItHgG~~s~ 195 (294)
+..+++.+|+.. +++|||+++..... .+++++.++ ...|++..+|+||.++ |.|+++++|||||||||+
T Consensus 297 ~~~~l~~~l~~~~~~~FiW~~~~~~~~------~~~~~~~~~---~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt 367 (496)
T KOG1192|consen 297 QKKELAKALESLQGVTFLWKYRPDDSI------YFPEGLPNR---GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNST 367 (496)
T ss_pred HHHHHHHHHHhCCCceEEEEecCCcch------hhhhcCCCC---CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHH
Confidence 999999999999 88999999753211 023332211 1346777799999998 699999999999999999
Q ss_pred HHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC
Q 042362 196 VEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG 275 (294)
Q Consensus 196 ~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~ 275 (294)
+|++++|||||++|+++||+.||+++++.|.|..+.+ ..++...+..++.+++. +++|+++++++++.+++++
T Consensus 368 ~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~----~~~~~~~~~~~~~~il~---~~~y~~~~~~l~~~~~~~p 440 (496)
T KOG1192|consen 368 LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDK----RDLVSEELLEAIKEILE---NEEYKEAAKRLSEILRDQP 440 (496)
T ss_pred HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEeh----hhcCcHHHHHHHHHHHc---ChHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999977777764 33455559999999998 7899999999999999988
Q ss_pred cHHHHHHHHH
Q 042362 276 DDEEINVVEK 285 (294)
Q Consensus 276 ~~~~~~~v~~ 285 (294)
... +..+.+
T Consensus 441 ~~~-~~~~~~ 449 (496)
T KOG1192|consen 441 ISP-ELAVKW 449 (496)
T ss_pred CCH-HHHHHH
Confidence 444 665533
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.96 E-value=2.1e-28 Score=228.61 Aligned_cols=209 Identities=21% Similarity=0.355 Sum_probs=167.9
Q ss_pred ccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHH
Q 042362 43 CKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEI 122 (294)
Q Consensus 43 ~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l 122 (294)
.+..+..+.+.|++ ....++++++++||+..... +...|....+++++||||+||........++.+
T Consensus 180 ~~~~l~~~~~~l~~-----~~~~~~~~~~~~Gp~~~~~~--------~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~ 246 (392)
T TIGR01426 180 RDLNLVYTPKAFQP-----AGETFDDSFTFVGPCIGDRK--------EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTC 246 (392)
T ss_pred cCcEEEeCChHhCC-----CccccCCCeEEECCCCCCcc--------ccCCCCCCCCCCCEEEEecCccCCCCHHHHHHH
Confidence 45567777665554 44567889999999876532 112377766778899999999876666688889
Q ss_pred HHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhC
Q 042362 123 ASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYG 202 (294)
Q Consensus 123 ~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~G 202 (294)
++++.+.+++++|.++..... . .+.. .+.|+.+.+|+||.++|.++++ +|||||+||++||+++|
T Consensus 247 ~~al~~~~~~~i~~~g~~~~~-~----~~~~--------~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G 311 (392)
T TIGR01426 247 VEAFRDLDWHVVLSVGRGVDP-A----DLGE--------LPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNG 311 (392)
T ss_pred HHHHhcCCCeEEEEECCCCCh-h----Hhcc--------CCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhC
Confidence 999999999999987643110 0 0111 3468889999999999998765 99999999999999999
Q ss_pred CcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHH
Q 042362 203 VPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEIN 281 (294)
Q Consensus 203 vP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~ 281 (294)
+|+|++|...||+.||+++++.|+|+.+.. ..++.++|.++|+++|. +++|+++++++++.++..+ ...+.+
T Consensus 312 ~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~----~~~~~~~l~~ai~~~l~---~~~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 312 VPMVAVPQGADQPMTARRIAELGLGRHLPP----EEVTAEKLREAVLAVLS---DPRYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred CCEEecCCcccHHHHHHHHHHCCCEEEecc----ccCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999999999999999999999863 56899999999999998 6889999999999999865 666666
Q ss_pred HHHHH
Q 042362 282 VVEKL 286 (294)
Q Consensus 282 ~v~~l 286 (294)
+|+.+
T Consensus 385 ~i~~~ 389 (392)
T TIGR01426 385 EIEGF 389 (392)
T ss_pred HHHHh
Confidence 66655
No 26
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-27 Score=222.63 Aligned_cols=189 Identities=23% Similarity=0.378 Sum_probs=154.7
Q ss_pred CCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccc
Q 042362 67 KKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFT 146 (294)
Q Consensus 67 ~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~ 146 (294)
|....++||+... ...+...|.. .++++||+|+||.... .+.++.+++++...+.++|...+.. + .
T Consensus 212 p~~~~~~~~~~~~-------~~~~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~--~-~- 277 (406)
T COG1819 212 PFIGPYIGPLLGE-------AANELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA--R-D- 277 (406)
T ss_pred CCCcCcccccccc-------ccccCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc--c-c-
Confidence 3344555555444 2233444533 3467999999999866 7788889999999999999987541 1 0
Q ss_pred hhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCc
Q 042362 147 IEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGV 226 (294)
Q Consensus 147 ~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~ 226 (294)
.... .+.|+.+.+|+||..+|.++++ ||||||+||+.||+++|||+|++|...||+.||.++++.|+
T Consensus 278 ~~~~-----------~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~ 344 (406)
T COG1819 278 TLVN-----------VPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGA 344 (406)
T ss_pred cccc-----------CCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCC
Confidence 0111 4568999999999999999777 99999999999999999999999999999999999999999
Q ss_pred EEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHhh
Q 042362 227 GLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 289 (294)
Q Consensus 227 G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~~ 289 (294)
|+.+.. ..++.+.++++|+++|+ +++|+++++++++.++..+ .+.++++++.+...
T Consensus 345 G~~l~~----~~l~~~~l~~av~~vL~---~~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~~~ 401 (406)
T COG1819 345 GIALPF----EELTEERLRAAVNEVLA---DDSYRRAAERLAEEFKEEDGPAKAADLLEEFARE 401 (406)
T ss_pred ceecCc----ccCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHhc
Confidence 999974 67899999999999999 7999999999999999976 77778888776554
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.94 E-value=1.8e-25 Score=209.24 Aligned_cols=193 Identities=22% Similarity=0.310 Sum_probs=147.5
Q ss_pred hhcCCCeEeeC-CCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCC-HHHHHHHHHHHhcCCCcEEEEEeecC
Q 042362 64 YITKKETIPVG-PLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLS-QEEMNEIASGLLLSEVSFIWVVRFHS 141 (294)
Q Consensus 64 ~~~~~~~~~VG-pl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~-~~~~~~l~~al~~~~~~~i~~~~~~~ 141 (294)
+.++++..++| ++...+. ....+.++..|++.. +++|||++||..... ......+++++...+.++||.++...
T Consensus 205 ~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~ 280 (401)
T cd03784 205 PDWPRFDLVTGYGFRDVPY--NGPPPPELWLFLAAG--RPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGG 280 (401)
T ss_pred CCccccCcEeCCCCCCCCC--CCCCCHHHHHHHhCC--CCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCcc
Confidence 34556666675 4433221 223456778888753 569999999998644 45677888999888999999986532
Q ss_pred CCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHH
Q 042362 142 EGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMV 221 (294)
Q Consensus 142 ~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v 221 (294)
.. ... .+.|+++.+|+||..+|.++++ ||||||+||++||+++|+|+|++|+..||+.||+++
T Consensus 281 ~~----~~~-----------~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~ 343 (401)
T cd03784 281 LG----AED-----------LPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV 343 (401)
T ss_pred cc----ccC-----------CCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH
Confidence 11 000 4568999999999999999555 999999999999999999999999999999999999
Q ss_pred HHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhc-CcHHHHHHHHH
Q 042362 222 ADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKK-GDDEEINVVEK 285 (294)
Q Consensus 222 ~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~-~~~~~~~~v~~ 285 (294)
++.|+|+.+.. ..++.++|.++|+++++ + .++++++++++.++.. +...+.++|+.
T Consensus 344 ~~~G~g~~l~~----~~~~~~~l~~al~~~l~---~-~~~~~~~~~~~~~~~~~g~~~~~~~ie~ 400 (401)
T cd03784 344 AELGAGPALDP----RELTAERLAAALRRLLD---P-PSRRRAAALLRRIREEDGVPSAADVIER 400 (401)
T ss_pred HHCCCCCCCCc----ccCCHHHHHHHHHHHhC---H-HHHHHHHHHHHHHHhccCHHHHHHHHhh
Confidence 99999999974 45899999999999997 3 4566677776666553 45556666653
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.69 E-value=9.5e-16 Score=141.39 Aligned_cols=189 Identities=17% Similarity=0.255 Sum_probs=125.6
Q ss_pred CCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCH-HHHHHHHHHHhcCCCcEEEEEeecCCCccc
Q 042362 68 KETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQ-EEMNEIASGLLLSEVSFIWVVRFHSEGKFT 146 (294)
Q Consensus 68 ~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~-~~~~~l~~al~~~~~~~i~~~~~~~~~~~~ 146 (294)
+++.++|+.+.... ..........-+.-.+++++|+|..||++...- +.+.+++..+. .+++++|.++...
T Consensus 154 ~k~~~tG~Pvr~~~--~~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~----- 225 (352)
T PRK12446 154 EKVIYTGSPVREEV--LKGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN----- 225 (352)
T ss_pred CCeEEECCcCCccc--ccccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch-----
Confidence 47888997665421 011112222233334557799999999996443 33445555543 2488899887431
Q ss_pred hhccCChhhHHhhhcCCCCcEEecCC-Ccc-cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccc-----cchHhHHH
Q 042362 147 IEEALPQSFSKEIQGNNKGMVVQGWA-PQA-KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMV-----LDQLFNAK 219 (294)
Q Consensus 147 ~~~~lp~~~~~~~~~~~~~v~v~~~~-pq~-~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~-----~DQ~~na~ 219 (294)
++..+. ...++.+.+|+ +++ +++.++++ +|||||.+|+.|++++|+|+|++|+. .||..||+
T Consensus 226 ~~~~~~---------~~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~ 294 (352)
T PRK12446 226 LDDSLQ---------NKEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAE 294 (352)
T ss_pred HHHHHh---------hcCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHH
Confidence 111010 11244555777 444 67888776 99999999999999999999999974 48999999
Q ss_pred HHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q 042362 220 MVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKGDDEEINVVEKLL 287 (294)
Q Consensus 220 ~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~~~~~v~~l~ 287 (294)
.+++.|+|..+. ...++++.|.++|.+++.+ .+.|++++++++. ..+++++++.+.
T Consensus 295 ~l~~~g~~~~l~----~~~~~~~~l~~~l~~ll~~--~~~~~~~~~~~~~------~~aa~~i~~~i~ 350 (352)
T PRK12446 295 SFERQGYASVLY----EEDVTVNSLIKHVEELSHN--NEKYKTALKKYNG------KEAIQTIIDHIS 350 (352)
T ss_pred HHHHCCCEEEcc----hhcCCHHHHHHHHHHHHcC--HHHHHHHHHHcCC------CCHHHHHHHHHH
Confidence 999999999996 3678999999999999973 2345544443221 345566666554
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.59 E-value=3.7e-14 Score=130.29 Aligned_cols=166 Identities=23% Similarity=0.324 Sum_probs=122.9
Q ss_pred CCceEEEEeCCCccCC-HHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCC-cEEecCCCcc-c
Q 042362 100 PSSVVYVSFGSEYFLS-QEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKG-MVVQGWAPQA-K 176 (294)
Q Consensus 100 ~~~vVyvs~GS~~~~~-~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-v~v~~~~pq~-~ 176 (294)
++++|+|..||++... ++.+.+++..+.+ ++.+++.++... + +...... ...+ +.+.+|..++ .
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~-----~-----~~~~~~~--~~~~~~~v~~f~~dm~~ 248 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND-----L-----EELKSAY--NELGVVRVLPFIDDMAA 248 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch-----H-----HHHHHHH--hhcCcEEEeeHHhhHHH
Confidence 5679999999999643 3445555555544 678888876431 0 1222222 2223 7788888876 6
Q ss_pred ccCCCCcceEEecCCchHHHHHHHhCCcEEeecc-cc---chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHH
Q 042362 177 ILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPM-VL---DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 177 lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~-~~---DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl 252 (294)
+|..+++ +||++|.+|+.|++++|+|+|.+|+ .+ ||..||+.+++.|+|..+. +..+|.+.+.+.|.+++
T Consensus 249 ~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~----~~~lt~~~l~~~i~~l~ 322 (357)
T COG0707 249 LLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIR----QSELTPEKLAELILRLL 322 (357)
T ss_pred HHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEec----cccCCHHHHHHHHHHHh
Confidence 7776665 9999999999999999999999996 33 8999999999999999997 46789999999999999
Q ss_pred cCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHhhc
Q 042362 253 EQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQLV 290 (294)
Q Consensus 253 ~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~~~ 290 (294)
.+ .++.++|++..+..+ ..++.++++.+...+
T Consensus 323 ~~------~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~~ 355 (357)
T COG0707 323 SN------PEKLKAMAENAKKLGKPDAAERIADLLLALA 355 (357)
T ss_pred cC------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 73 556666777777655 556667766665543
No 30
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.54 E-value=6e-16 Score=127.80 Aligned_cols=136 Identities=22% Similarity=0.310 Sum_probs=93.5
Q ss_pred eEEEEeCCCccCC-HHHHHHHHHHHhc--CCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCc-cccc
Q 042362 103 VVYVSFGSEYFLS-QEEMNEIASGLLL--SEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQ-AKIL 178 (294)
Q Consensus 103 vVyvs~GS~~~~~-~~~~~~l~~al~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq-~~lL 178 (294)
+|+|++||.+... .+.+..+...+.. ..+++++.++.... ...... +.+.+.++.+.+|.++ ..++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~-----~~~~~~-----~~~~~~~v~~~~~~~~m~~~m 70 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY-----EELKIK-----VENFNPNVKVFGFVDNMAELM 70 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC-----HHHCCC-----HCCTTCCCEEECSSSSHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH-----HHHHHH-----HhccCCcEEEEechhhHHHHH
Confidence 5899999987521 1222333333332 24678888765311 110111 1012368899999995 4788
Q ss_pred CCCCcceEEecCCchHHHHHHHhCCcEEeecccc----chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 179 GHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVL----DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 179 ~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~----DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
..+++ +|||||.+|+.|++++|+|+|++|... +|..||..+++.|+|..+.. ...+.+.|.++|.+++.+
T Consensus 71 ~~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~----~~~~~~~L~~~i~~l~~~ 144 (167)
T PF04101_consen 71 AAADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDE----SELNPEELAEAIEELLSD 144 (167)
T ss_dssp HHHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSEC----CC-SCCCHHHHHHCHCCC
T ss_pred HHcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCc----ccCCHHHHHHHHHHHHcC
Confidence 87666 999999999999999999999999987 99999999999999999973 566789999999999873
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.48 E-value=2.8e-13 Score=122.90 Aligned_cols=122 Identities=18% Similarity=0.367 Sum_probs=94.6
Q ss_pred CCceEEEEeCCCccCCHHHHHHHHHHHhcCC-CcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCC-C-ccc
Q 042362 100 PSSVVYVSFGSEYFLSQEEMNEIASGLLLSE-VSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWA-P-QAK 176 (294)
Q Consensus 100 ~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~-p-q~~ 176 (294)
+++.|+|++|+.... .+++++...+ +++++. +....+ . ...|+.+..|. + ..+
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~~---------~--------~~~ni~~~~~~~~~~~~ 246 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAAD---------P--------RPGNIHVRPFSTPDFAE 246 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCccc---------c--------cCCCEEEeecChHHHHH
Confidence 355899999998642 5556666555 666665 432100 0 45688888876 3 336
Q ss_pred ccCCCCcceEEecCCchHHHHHHHhCCcEEeecc--ccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 177 ILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPM--VLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 177 lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~--~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
+|..+++ +|||||.||+.|++++|+|+|++|. +.||..||+.+++.|+|..+. ...++++.|.++|+++
T Consensus 247 ~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~----~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 247 LMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLS----QEDLTPERLAEFLERL 317 (318)
T ss_pred HHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcc----cccCCHHHHHHHHhcC
Confidence 7877665 9999999999999999999999998 789999999999999999996 3678999999998763
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.35 E-value=6.1e-12 Score=114.67 Aligned_cols=121 Identities=20% Similarity=0.280 Sum_probs=83.0
Q ss_pred CceEEEEeCCCccCCHHHHHHHHHHHhcCCC-cEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCc--ccc
Q 042362 101 SSVVYVSFGSEYFLSQEEMNEIASGLLLSEV-SFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQ--AKI 177 (294)
Q Consensus 101 ~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~-~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq--~~l 177 (294)
++.|+|.+|+... ..++++|.+.+. .++ +.... . ..+. ...|+.+.+|.|+ ...
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~~~~i--~~~~~-~-------~~~~-------~~~~v~~~~~~~~~~~~~ 244 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIANVKFV--CYSYE-V-------AKNS-------YNENVEIRRITTDNFKEL 244 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCCeEEE--EeCCC-C-------Cccc-------cCCCEEEEECChHHHHHH
Confidence 4578888888642 345666655542 443 22211 0 0010 2357888899972 255
Q ss_pred cCCCCcceEEecCCchHHHHHHHhCCcEEeecccc--chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 178 LGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVL--DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 178 L~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
|.. ++++|||||++|+.||+++|+|+|++|... ||..||+.+++.|+|+.+.. ..+ ++.+++.++++
T Consensus 245 l~~--ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~----~~~---~~~~~~~~~~~ 313 (321)
T TIGR00661 245 IKN--AELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEY----KEL---RLLEAILDIRN 313 (321)
T ss_pred HHh--CCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcCh----hhH---HHHHHHHhccc
Confidence 565 455999999999999999999999999854 89999999999999999863 222 55555555554
No 33
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.33 E-value=2e-10 Score=107.11 Aligned_cols=220 Identities=16% Similarity=0.173 Sum_probs=129.4
Q ss_pred ccccEEEEcCchhhcHHHHHHHh-hhcC-CCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHH
Q 042362 41 LSCKLVLIKTSRDIESKYLDYFS-YITK-KETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEE 118 (294)
Q Consensus 41 ~~~~~~lint~~ele~~~~~~~~-~~~~-~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~ 118 (294)
+.+|.+++.|-. + .+.+. ...+ +++..+|.-+............++..-+.-.+++++|++..|+.+......
T Consensus 149 ~~~d~~~~~s~~-~----~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~ 223 (382)
T PLN02605 149 KGVTRCFCPSEE-V----AKRALKRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEE 223 (382)
T ss_pred CCCCEEEECCHH-H----HHHHHHcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHH
Confidence 347888887722 2 12121 1233 567878844422110111122334443444445668888877766433222
Q ss_pred -HHHHHHHHh-----cCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc-cccCCCCcceEEecCC
Q 042362 119 -MNEIASGLL-----LSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA-KILGHGSIGGFVSHCG 191 (294)
Q Consensus 119 -~~~l~~al~-----~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~-~lL~~~~v~~~ItHgG 191 (294)
++.+...+. ..+.+++++++.+ ..+.. .+.+.. ...++.+.+|+++. .++..+++ +|+.+|
T Consensus 224 li~~l~~~~~~~~~~~~~~~~~vi~G~~----~~~~~----~L~~~~--~~~~v~~~G~~~~~~~l~~aaDv--~V~~~g 291 (382)
T PLN02605 224 TARALGDSLYDKNLGKPIGQVVVICGRN----KKLQS----KLESRD--WKIPVKVRGFVTNMEEWMGACDC--IITKAG 291 (382)
T ss_pred HHHHHHHhhccccccCCCceEEEEECCC----HHHHH----HHHhhc--ccCCeEEEeccccHHHHHHhCCE--EEECCC
Confidence 233322221 2345667776532 11111 111111 23467888999876 67776665 999999
Q ss_pred chHHHHHHHhCCcEEeeccccchH-hHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHH
Q 042362 192 WGSTVEGIMYGVPIIAVPMVLDQL-FNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSES 270 (294)
Q Consensus 192 ~~s~~Eal~~GvP~i~~P~~~DQ~-~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~ 270 (294)
.+|++||+++|+|+|+.+....|. .|+..+.+.|.|+.+. +.++|.++|.+++.+ +++. .++|++.
T Consensus 292 ~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~--------~~~~la~~i~~ll~~--~~~~---~~~m~~~ 358 (382)
T PLN02605 292 PGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFSE--------SPKEIARIVAEWFGD--KSDE---LEAMSEN 358 (382)
T ss_pred cchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeecC--------CHHHHHHHHHHHHcC--CHHH---HHHHHHH
Confidence 999999999999999998766675 6999999999998662 789999999999973 1333 3344444
Q ss_pred HHhcC-cHHHHHHHHHHHhhc
Q 042362 271 IKKKG-DDEEINVVEKLLQLV 290 (294)
Q Consensus 271 ~~~~~-~~~~~~~v~~l~~~~ 290 (294)
.+... ..+.+++++.+.+..
T Consensus 359 ~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 359 ALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred HHHhcCCchHHHHHHHHHHHh
Confidence 44433 445566666665543
No 34
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.33 E-value=9e-11 Score=108.18 Aligned_cols=113 Identities=19% Similarity=0.293 Sum_probs=87.2
Q ss_pred cEEecCCCc-ccccCCCCcceEEecCCchHHHHHHHhCCcEEeecc----ccchHhHHHHHHHhCcEEEecccccCCccc
Q 042362 166 MVVQGWAPQ-AKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPM----VLDQLFNAKMVADIGVGLEVPREEINQRVR 240 (294)
Q Consensus 166 v~v~~~~pq-~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t 240 (294)
+.+.+|+.+ .+++..+++ +|+|+|.++++||+++|+|+|++|. ..+|..|+..+.+.|.|..+.. ..++
T Consensus 237 v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~----~~~~ 310 (357)
T PRK00726 237 AEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQ----SDLT 310 (357)
T ss_pred EEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEc----ccCC
Confidence 777888844 478877666 9999999999999999999999996 4689999999999999999963 4568
Q ss_pred HHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhh
Q 042362 241 KKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKGDDEEINVVEKLLQL 289 (294)
Q Consensus 241 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~~~~~v~~l~~~ 289 (294)
++++.++|.++++ ++++++.+.+-++.... ....+++++.+.+.
T Consensus 311 ~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 354 (357)
T PRK00726 311 PEKLAEKLLELLS---DPERLEAMAEAARALGK--PDAAERLADLIEEL 354 (357)
T ss_pred HHHHHHHHHHHHc---CHHHHHHHHHHHHhcCC--cCHHHHHHHHHHHH
Confidence 9999999999998 56666555554443322 33455555555544
No 35
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.29 E-value=1.2e-10 Score=106.83 Aligned_cols=191 Identities=17% Similarity=0.208 Sum_probs=116.6
Q ss_pred ccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCH-HHHHH
Q 042362 43 CKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQ-EEMNE 121 (294)
Q Consensus 43 ~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~-~~~~~ 121 (294)
+|.+++.|-...+ + ..+.++..+|..+.... .. .... ...+...++.++|++..|+...... +.+.+
T Consensus 135 ~~~vi~~s~~~~~-----~---~~~~~~~~i~n~v~~~~--~~-~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~ 202 (350)
T cd03785 135 ADRVALSFPETAK-----Y---FPKDKAVVTGNPVREEI--LA-LDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPE 202 (350)
T ss_pred hCEEEEcchhhhh-----c---CCCCcEEEECCCCchHH--hh-hhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHH
Confidence 6777766532221 1 12356777886543311 00 0111 2233333445577777776643211 22233
Q ss_pred HHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCC-cccccCCCCcceEEecCCchHHHHHHH
Q 042362 122 IASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAP-QAKILGHGSIGGFVSHCGWGSTVEGIM 200 (294)
Q Consensus 122 l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~p-q~~lL~~~~v~~~ItHgG~~s~~Eal~ 200 (294)
++..+.+.+..+++.++.. .. +.+.+.+.+...++.+.+|+. ...+|..+++ +|+++|.++++||++
T Consensus 203 a~~~l~~~~~~~~~i~G~g--~~--------~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~ 270 (350)
T cd03785 203 ALAELLRKRLQVIHQTGKG--DL--------EEVKKAYEELGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAA 270 (350)
T ss_pred HHHHhhccCeEEEEEcCCc--cH--------HHHHHHHhccCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHH
Confidence 4444443445556666532 11 112222211245788889883 3467877666 999999999999999
Q ss_pred hCCcEEeecc----ccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHH
Q 042362 201 YGVPIIAVPM----VLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKA 264 (294)
Q Consensus 201 ~GvP~i~~P~----~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a 264 (294)
+|+|+|+.|. ..+|..|+..+.+.|.|..+.. ...+.+++.++|.+++. +++.++.+
T Consensus 271 ~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~----~~~~~~~l~~~i~~ll~---~~~~~~~~ 331 (350)
T cd03785 271 LGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQ----EELTPERLAAALLELLS---DPERLKAM 331 (350)
T ss_pred hCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEec----CCCCHHHHHHHHHHHhc---CHHHHHHH
Confidence 9999999986 4578999999999999999963 34689999999999997 44444433
No 36
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.27 E-value=3.4e-10 Score=106.02 Aligned_cols=135 Identities=13% Similarity=0.276 Sum_probs=95.1
Q ss_pred CCCceEEEEeCCCccCCHHHHHHHHHHHhc--CCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc-
Q 042362 99 EPSSVVYVSFGSEYFLSQEEMNEIASGLLL--SEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA- 175 (294)
Q Consensus 99 ~~~~vVyvs~GS~~~~~~~~~~~l~~al~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~- 175 (294)
+++++|+++.|+.+. ...+..+++++.+ .+.+++++++.+ ..+. +.+.+.. +...++.+.+|+++.
T Consensus 200 ~~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~----~~l~----~~l~~~~-~~~~~v~~~G~~~~~~ 268 (391)
T PRK13608 200 PDKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKS----KELK----RSLTAKF-KSNENVLILGYTKHMN 268 (391)
T ss_pred CCCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCC----HHHH----HHHHHHh-ccCCCeEEEeccchHH
Confidence 346688999998873 2344455555322 345676665432 1111 1111111 123478888999765
Q ss_pred cccCCCCcceEEecCCchHHHHHHHhCCcEEee-ccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 176 KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV-PMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 176 ~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.++..+++ +|+..|..|+.||+++|+|+|+. |...+|..|+..+.+.|+|+.+. +.+++.++|.+++++
T Consensus 269 ~~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~--------~~~~l~~~i~~ll~~ 338 (391)
T PRK13608 269 EWMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD--------TPEEAIKIVASLTNG 338 (391)
T ss_pred HHHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC--------CHHHHHHHHHHHhcC
Confidence 67777666 99999989999999999999998 66666778999999999998763 688999999999973
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.24 E-value=5e-10 Score=104.22 Aligned_cols=192 Identities=13% Similarity=0.175 Sum_probs=119.0
Q ss_pred cccEEEEcCchhhcHHHHHHHhh-hc-CCCeEeeC-CCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHH
Q 042362 42 SCKLVLIKTSRDIESKYLDYFSY-IT-KKETIPVG-PLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEE 118 (294)
Q Consensus 42 ~~~~~lint~~ele~~~~~~~~~-~~-~~~~~~VG-pl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~ 118 (294)
++|.+++.|-. ..+.+.. .. +.++..+| |+..... .......+..-+.-.+++++|++..|+.... ..
T Consensus 147 ~ad~i~~~s~~-----~~~~l~~~gi~~~ki~v~G~p~~~~f~--~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~--k~ 217 (380)
T PRK13609 147 EVDRYFVATDH-----VKKVLVDIGVPPEQVVETGIPIRSSFE--LKINPDIIYNKYQLCPNKKILLIMAGAHGVL--GN 217 (380)
T ss_pred CCCEEEECCHH-----HHHHHHHcCCChhHEEEECcccChHHc--CcCCHHHHHHHcCCCCCCcEEEEEcCCCCCC--cC
Confidence 48888888732 2222222 12 24677777 4322110 0011122222222233456888888887642 23
Q ss_pred HHHHHHHHhc-CCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc-cccCCCCcceEEecCCchHHH
Q 042362 119 MNEIASGLLL-SEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA-KILGHGSIGGFVSHCGWGSTV 196 (294)
Q Consensus 119 ~~~l~~al~~-~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~-~lL~~~~v~~~ItHgG~~s~~ 196 (294)
+..+++++.+ .+.+++++.+.+. .+. +.+.+.....+.++.+.+|+++. .++..+++ +|+.+|..|+.
T Consensus 218 ~~~li~~l~~~~~~~~viv~G~~~----~~~----~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~--~v~~~gg~t~~ 287 (380)
T PRK13609 218 VKELCQSLMSVPDLQVVVVCGKNE----ALK----QSLEDLQETNPDALKVFGYVENIDELFRVTSC--MITKPGGITLS 287 (380)
T ss_pred HHHHHHHHhhCCCcEEEEEeCCCH----HHH----HHHHHHHhcCCCcEEEEechhhHHHHHHhccE--EEeCCCchHHH
Confidence 4566666654 3567776654210 011 11222221133578888999875 78888776 99999999999
Q ss_pred HHHHhCCcEEee-ccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHH
Q 042362 197 EGIMYGVPIIAV-PMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRK 263 (294)
Q Consensus 197 Eal~~GvP~i~~-P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~ 263 (294)
||+++|+|+|+. |..+.|..|+..+.+.|+|+... +.+++.++|.++++ +++.+++
T Consensus 288 EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~--------~~~~l~~~i~~ll~---~~~~~~~ 344 (380)
T PRK13609 288 EAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIR--------DDEEVFAKTEALLQ---DDMKLLQ 344 (380)
T ss_pred HHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEEC--------CHHHHHHHHHHHHC---CHHHHHH
Confidence 999999999985 66677788999999999998663 57999999999997 4444433
No 38
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.97 E-value=6.1e-08 Score=90.94 Aligned_cols=197 Identities=12% Similarity=0.142 Sum_probs=112.7
Q ss_pred HhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeC-CCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCH
Q 042362 38 AIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVG-PLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQ 116 (294)
Q Consensus 38 ~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VG-pl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~ 116 (294)
.+.+.++.+++.+ +...+. +++ .+.++.+|| |+..... .. ... .-.++.++|.+-.||....-.
T Consensus 156 l~~~~a~~v~~~~--~~t~~~---l~~-~g~k~~~vGnPv~d~l~-~~---~~~-----~l~~~~~~lllLpGSR~ae~~ 220 (396)
T TIGR03492 156 MRSRRCLAVFVRD--RLTARD---LRR-QGVRASYLGNPMMDGLE-PP---ERK-----PLLTGRFRIALLPGSRPPEAY 220 (396)
T ss_pred hhchhhCEEeCCC--HHHHHH---HHH-CCCeEEEeCcCHHhcCc-cc---ccc-----ccCCCCCEEEEECCCCHHHHH
Confidence 3434367777766 333333 332 234899999 5544321 00 000 112335689999999875333
Q ss_pred HHHHHHHHHHhc----CCCcEEEEEeecCCCccchhccCCh-hhHH---------hhhcCCCCcEEecCCCc-ccccCCC
Q 042362 117 EEMNEIASGLLL----SEVSFIWVVRFHSEGKFTIEEALPQ-SFSK---------EIQGNNKGMVVQGWAPQ-AKILGHG 181 (294)
Q Consensus 117 ~~~~~l~~al~~----~~~~~i~~~~~~~~~~~~~~~~lp~-~~~~---------~~~~~~~~v~v~~~~pq-~~lL~~~ 181 (294)
..+..+++++.. .+..|++.+.... ....+...+.+ ++.. .. ...++.+..+..+ ..++..+
T Consensus 221 ~~lp~~l~al~~L~~~~~~~~v~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~l~~A 297 (396)
T TIGR03492 221 RNLKLLLRALEALPDSQPFVFLAAIVPSL-SLEKLQAILEDLGWQLEGSSEDQTSLF--QKGTLEVLLGRGAFAEILHWA 297 (396)
T ss_pred ccHHHHHHHHHHHhhCCCeEEEEEeCCCC-CHHHHHHHHHhcCceecCCccccchhh--ccCceEEEechHhHHHHHHhC
Confidence 334455555443 3677888763221 11111111100 0000 00 0123444445433 3677776
Q ss_pred CcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHh----CcEEEecccccCCcccHHHHHHHHHHHHcCCcc
Q 042362 182 SIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI----GVGLEVPREEINQRVRKKDLARVIKQVVEQEEG 257 (294)
Q Consensus 182 ~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~----G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~ 257 (294)
++ +|+.+|..| .|++..|+|+|++|.-..|. |+..+++. |.++.+.. .+.+.|.+++.+++. +
T Consensus 298 Dl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~------~~~~~l~~~l~~ll~---d 364 (396)
T TIGR03492 298 DL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS------KNPEQAAQVVRQLLA---D 364 (396)
T ss_pred CE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC------CCHHHHHHHHHHHHc---C
Confidence 66 999999877 99999999999999877776 98877764 77777642 345999999999998 4
Q ss_pred HHHHHHHH
Q 042362 258 QQIKRKAK 265 (294)
Q Consensus 258 ~~~r~~a~ 265 (294)
++.+++..
T Consensus 365 ~~~~~~~~ 372 (396)
T TIGR03492 365 PELLERCR 372 (396)
T ss_pred HHHHHHHH
Confidence 55444443
No 39
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.95 E-value=4.2e-09 Score=94.21 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=75.3
Q ss_pred ceEEEEeCCCccCCHHHHHHHHHHHhc--CCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc-ccc
Q 042362 102 SVVYVSFGSEYFLSQEEMNEIASGLLL--SEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA-KIL 178 (294)
Q Consensus 102 ~vVyvs~GS~~~~~~~~~~~l~~al~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~-~lL 178 (294)
+.|+|+||...... ....++++|.. .+.++.++++..... .+.+.+... ...++.+.++++++ .+|
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~~--------~~~l~~~~~-~~~~i~~~~~~~~m~~lm 239 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNPN--------LDELKKFAK-EYPNIILFIDVENMAELM 239 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCcC--------HHHHHHHHH-hCCCEEEEeCHHHHHHHH
Confidence 57899998655322 34556666654 345777777653211 122222221 34578888999987 788
Q ss_pred CCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHH
Q 042362 179 GHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKM 220 (294)
Q Consensus 179 ~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~ 220 (294)
..+++ +||+|| +|+.|++++|+|+|++|...+|..||+.
T Consensus 240 ~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 240 NEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 88666 999999 9999999999999999999999999975
No 40
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.94 E-value=2.2e-08 Score=91.68 Aligned_cols=80 Identities=24% Similarity=0.383 Sum_probs=65.7
Q ss_pred ccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccc---cchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 175 AKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMV---LDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 175 ~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~---~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
..+|..+++ +|+++|.++++||+++|+|+|+.|.. .+|..|+..+.+.+.|..+.. +..+.++|.++|.++
T Consensus 245 ~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~----~~~~~~~l~~~i~~l 318 (348)
T TIGR01133 245 AAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQ----KELLPEKLLEALLKL 318 (348)
T ss_pred HHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEec----ccCCHHHHHHHHHHH
Confidence 467777666 99999988999999999999999863 468889999999999998863 445799999999999
Q ss_pred HcCCccHHHHHH
Q 042362 252 VEQEEGQQIKRK 263 (294)
Q Consensus 252 l~~~~~~~~r~~ 263 (294)
+. +++++++
T Consensus 319 l~---~~~~~~~ 327 (348)
T TIGR01133 319 LL---DPANLEA 327 (348)
T ss_pred Hc---CHHHHHH
Confidence 97 5554443
No 41
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.88 E-value=2.4e-08 Score=93.41 Aligned_cols=218 Identities=12% Similarity=0.101 Sum_probs=122.4
Q ss_pred HHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCH
Q 042362 37 KAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQ 116 (294)
Q Consensus 37 ~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~ 116 (294)
..+.+.+|.+++.+ ++|.+.+ +. ...+..+||.-..+......+...+...-+.-.+++++|.+..||....-.
T Consensus 133 r~l~~~~d~v~~~~--~~e~~~~---~~-~g~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~ 206 (385)
T TIGR00215 133 KKIEKATDFLLAIL--PFEKAFY---QK-KNVPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVE 206 (385)
T ss_pred HHHHHHHhHhhccC--CCcHHHH---Hh-cCCCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHH
Confidence 34444466666655 2233332 21 223667799433221100001222333333334456788888899875322
Q ss_pred HHHHHHHHHHh---cC--CCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCC
Q 042362 117 EEMNEIASGLL---LS--EVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCG 191 (294)
Q Consensus 117 ~~~~~l~~al~---~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG 191 (294)
..+..+++++. +. +.++++......+. ..+ +.+.+.. +....+.+..+ ....++..+++ +|+-+|
T Consensus 207 k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~-~~~-----~~~~~~~-~~~~~v~~~~~-~~~~~l~aADl--~V~~SG 276 (385)
T TIGR00215 207 KLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRR-LQF-----EQIKAEY-GPDLQLHLIDG-DARKAMFAADA--ALLASG 276 (385)
T ss_pred HhHHHHHHHHHHHHHhCCCeEEEEEeCCchhH-HHH-----HHHHHHh-CCCCcEEEECc-hHHHHHHhCCE--EeecCC
Confidence 33444554433 22 34555543321111 011 1111111 01122332222 22357776665 999999
Q ss_pred chHHHHHHHhCCcEEee----cccc---------chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCC---
Q 042362 192 WGSTVEGIMYGVPIIAV----PMVL---------DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQE--- 255 (294)
Q Consensus 192 ~~s~~Eal~~GvP~i~~----P~~~---------DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~--- 255 (294)
..|+ |++++|+|+|++ |+.. .|..|+..+.+.++...+. ....|++.|.+.+.+++.+.
T Consensus 277 t~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~----q~~~~~~~l~~~~~~ll~~~~~~ 351 (385)
T TIGR00215 277 TAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELL----QEECTPHPLAIALLLLLENGLKA 351 (385)
T ss_pred HHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhc----CCCCCHHHHHHHHHHHhcCCccc
Confidence 9888 999999999999 8632 2777999999999999886 46789999999999999853
Q ss_pred -c-cHHHHHHHHHHHHHHHhcC
Q 042362 256 -E-GQQIKRKAKELSESIKKKG 275 (294)
Q Consensus 256 -~-~~~~r~~a~~l~~~~~~~~ 275 (294)
+ ...+++..+++++.+...+
T Consensus 352 ~~~~~~~~~~~~~~~~~l~~~~ 373 (385)
T TIGR00215 352 YKEMHRERQFFEELRQRIYCNA 373 (385)
T ss_pred HHHHHHHHHHHHHHHHHhcCCC
Confidence 2 2356666666666665444
No 42
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.70 E-value=5.7e-07 Score=80.78 Aligned_cols=193 Identities=16% Similarity=0.217 Sum_probs=125.6
Q ss_pred HHHhhccccEEEEcCchhhcHHHHHHH-hhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccC
Q 042362 36 LKAIDLSCKLVLIKTSRDIESKYLDYF-SYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFL 114 (294)
Q Consensus 36 ~~~~~~~~~~~lint~~ele~~~~~~~-~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~ 114 (294)
.+.+.+--|.|++...|+|-.+.-.|. .+....++.|+|-+ ..+- +..+.+ |... +++.-|+||-|.-..
T Consensus 161 ~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v-q~~~-~~~~~p-----~~~~-pE~~~Ilvs~GGG~d- 231 (400)
T COG4671 161 VRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV-QRSL-PHLPLP-----PHEA-PEGFDILVSVGGGAD- 231 (400)
T ss_pred HHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEe-eccC-cCCCCC-----CcCC-CccceEEEecCCChh-
Confidence 344555468999999888754321111 11123578899987 2211 111111 1111 344478888877542
Q ss_pred CHHHHHHHHHHHhc-CCCc--EEEEEeecCCCccchhccCChhhHHhhh---cCCCCcEEecCCCcc-cccCCCCcceEE
Q 042362 115 SQEEMNEIASGLLL-SEVS--FIWVVRFHSEGKFTIEEALPQSFSKEIQ---GNNKGMVVQGWAPQA-KILGHGSIGGFV 187 (294)
Q Consensus 115 ~~~~~~~l~~al~~-~~~~--~i~~~~~~~~~~~~~~~~lp~~~~~~~~---~~~~~v~v~~~~pq~-~lL~~~~v~~~I 187 (294)
..+.+...+.|-.. .+.+ .+.+++. ..|+.-.+++. .+.+++.+..|-.+. .+|.-++. +|
T Consensus 232 G~eLi~~~l~A~~~l~~l~~~~~ivtGP----------~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vV 299 (400)
T COG4671 232 GAELIETALAAAQLLAGLNHKWLIVTGP----------FMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VV 299 (400)
T ss_pred hHHHHHHHHHHhhhCCCCCcceEEEeCC----------CCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--ee
Confidence 34455555554332 3443 3333332 15554433332 134788888998776 56666555 99
Q ss_pred ecCCchHHHHHHHhCCcEEeecccc---chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 188 SHCGWGSTVEGIMYGVPIIAVPMVL---DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 188 tHgG~~s~~Eal~~GvP~i~~P~~~---DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
+-||.||++|-+.+|+|.+++|... +|..-|.|++++|+.-.+.. ..+|+..++++|...+.
T Consensus 300 Sm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~p----e~lt~~~La~al~~~l~ 364 (400)
T COG4671 300 SMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLP----ENLTPQNLADALKAALA 364 (400)
T ss_pred ecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCc----ccCChHHHHHHHHhccc
Confidence 9999999999999999999999843 89999999999999888874 67899999999999886
No 43
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.63 E-value=7e-07 Score=82.93 Aligned_cols=215 Identities=12% Similarity=0.114 Sum_probs=105.2
Q ss_pred ccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHH
Q 042362 43 CKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEI 122 (294)
Q Consensus 43 ~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l 122 (294)
+|.+++.+-.+ .+. ... ...++.++|-...+.. ........+..-+.-.+++++|++..||........+..+
T Consensus 135 ~d~i~~~~~~~--~~~---~~~-~g~~~~~~G~p~~~~~-~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l 207 (380)
T PRK00025 135 TDHVLALFPFE--AAF---YDK-LGVPVTFVGHPLADAI-PLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPF 207 (380)
T ss_pred HhhheeCCccC--HHH---HHh-cCCCeEEECcCHHHhc-ccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 67777766322 222 222 2234778884322211 0001122333334333345577777787654211223334
Q ss_pred HHHHh---c--CCCcEEEEEeecCCCccchhccCChhhHHhhhcC-CCCcEEecCCCc-ccccCCCCcceEEecCCchHH
Q 042362 123 ASGLL---L--SEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGN-NKGMVVQGWAPQ-AKILGHGSIGGFVSHCGWGST 195 (294)
Q Consensus 123 ~~al~---~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~-~~~v~v~~~~pq-~~lL~~~~v~~~ItHgG~~s~ 195 (294)
++++. + .+.+++|+.+... .. +.+.+.+.+. +-++.+.. ++ ..++..+++ +|+.+|.+++
T Consensus 208 ~~a~~~l~~~~~~~~~ii~~~~~~-~~--------~~~~~~~~~~~~~~v~~~~--~~~~~~~~~aDl--~v~~sG~~~l 274 (380)
T PRK00025 208 LKAAQLLQQRYPDLRFVLPLVNPK-RR--------EQIEEALAEYAGLEVTLLD--GQKREAMAAADA--ALAASGTVTL 274 (380)
T ss_pred HHHHHHHHHhCCCeEEEEecCChh-hH--------HHHHHHHhhcCCCCeEEEc--ccHHHHHHhCCE--EEECccHHHH
Confidence 44332 2 2456777643111 00 1122222111 22333321 22 356666665 9999998877
Q ss_pred HHHHHhCCcEEeeccccc--------hHhH-----HHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHH-
Q 042362 196 VEGIMYGVPIIAVPMVLD--------QLFN-----AKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIK- 261 (294)
Q Consensus 196 ~Eal~~GvP~i~~P~~~D--------Q~~n-----a~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r- 261 (294)
||+++|+|+|+.|-..- |..| +..+.+.+++..+. ....+++++.++|.++++ +++.+
T Consensus 275 -Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~l~~~i~~ll~---~~~~~~ 346 (380)
T PRK00025 275 -ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELL----QEEATPEKLARALLPLLA---DGARRQ 346 (380)
T ss_pred -HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhc----CCCCCHHHHHHHHHHHhc---CHHHHH
Confidence 99999999999854321 2111 12222233333332 245689999999999998 44444
Q ss_pred ---HHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 042362 262 ---RKAKELSESIKKKGDDEEINVVEKLLQ 288 (294)
Q Consensus 262 ---~~a~~l~~~~~~~~~~~~~~~v~~l~~ 288 (294)
++++++.+.+ ..+ +++++++.+.+
T Consensus 347 ~~~~~~~~~~~~~-~~~--a~~~~~~~i~~ 373 (380)
T PRK00025 347 ALLEGFTELHQQL-RCG--ADERAAQAVLE 373 (380)
T ss_pred HHHHHHHHHHHHh-CCC--HHHHHHHHHHH
Confidence 4444444444 323 33444444433
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.53 E-value=3.3e-05 Score=69.93 Aligned_cols=186 Identities=15% Similarity=0.101 Sum_probs=103.6
Q ss_pred HHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCC-CCCCCCchhHHHhhccCCCCceEEEEeCCCcc
Q 042362 35 FLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPV-YTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYF 113 (294)
Q Consensus 35 ~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~-~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~ 113 (294)
+...+.+.+|.+++.|....+ ........++..+.+-..... ............+- .+++.+++..|+...
T Consensus 137 ~~~~~~~~~d~i~~~s~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~G~~~~ 208 (364)
T cd03814 137 YLRWFHNRADRVLVPSPSLAD-----ELRARGFRRVRLWPRGVDTELFHPRRRDEALRARLG---PPDRPVLLYVGRLAP 208 (364)
T ss_pred HHHHHHHhCCEEEeCCHHHHH-----HHhccCCCceeecCCCccccccCcccccHHHHHHhC---CCCCeEEEEEecccc
Confidence 333444448999998854433 222222334444443222110 00001111112222 223466777887653
Q ss_pred C-CHHHHHHHHHHHhcC-CCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc---cccCCCCcceEEe
Q 042362 114 L-SQEEMNEIASGLLLS-EVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---KILGHGSIGGFVS 188 (294)
Q Consensus 114 ~-~~~~~~~l~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~lL~~~~v~~~It 188 (294)
. ..+.+.+++..+... +..+++. +... ....+. ....++.+.+|+++. .++..+++ +|.
T Consensus 209 ~k~~~~~i~~~~~l~~~~~~~l~i~-G~~~-~~~~~~------------~~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ 272 (364)
T cd03814 209 EKNLEALLDADLPLRRRPPVRLVIV-GDGP-ARARLE------------ARYPNVHFLGFLDGEELAAAYASADV--FVF 272 (364)
T ss_pred ccCHHHHHHHHHHhhhcCCceEEEE-eCCc-hHHHHh------------ccCCcEEEEeccCHHHHHHHHHhCCE--EEE
Confidence 2 234444444444332 3455444 3211 100010 145688889999876 46777666 776
Q ss_pred cCC----chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 189 HCG----WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 189 HgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.+. .++++||+++|+|+|+.+..+ +...+.+.+.|..+.. -+.+++.++|.+++.+
T Consensus 273 ~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~~~g~~~~~------~~~~~l~~~i~~l~~~ 332 (364)
T cd03814 273 PSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDGENGLLVEP------GDAEAFAAALAALLAD 332 (364)
T ss_pred CcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCCcceEEcCC------CCHHHHHHHHHHHHcC
Confidence 654 478999999999999987653 4555666688888753 3678899999999983
No 45
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.52 E-value=6.3e-07 Score=70.98 Aligned_cols=120 Identities=21% Similarity=0.216 Sum_probs=78.5
Q ss_pred eEEEEeCCCccCC---HHHHHHHHHHHhcCCC-cEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCc-ccc
Q 042362 103 VVYVSFGSEYFLS---QEEMNEIASGLLLSEV-SFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQ-AKI 177 (294)
Q Consensus 103 vVyvs~GS~~~~~---~~~~~~l~~al~~~~~-~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq-~~l 177 (294)
.+||+-||....+ .-...+..+.|.+.|+ +.|..++.... ..++.+..-.++.+-.+...+|-|. .+.
T Consensus 5 ~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-------~~~d~~~~~~k~~gl~id~y~f~psl~e~ 77 (170)
T KOG3349|consen 5 TVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-------FFGDPIDLIRKNGGLTIDGYDFSPSLTED 77 (170)
T ss_pred EEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-------CCCCHHHhhcccCCeEEEEEecCccHHHH
Confidence 8999999987421 1112445667777886 56666665311 1222221111002222334466676 355
Q ss_pred cCCCCcceEEecCCchHHHHHHHhCCcEEeec----cccchHhHHHHHHHhCcEEEec
Q 042362 178 LGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVP----MVLDQLFNAKMVADIGVGLEVP 231 (294)
Q Consensus 178 L~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P----~~~DQ~~na~~v~~~G~G~~l~ 231 (294)
+..+++ +|+|+|+||++|.+..|+|.|+++ +-..|..-|..+++.|-=....
T Consensus 78 I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ 133 (170)
T KOG3349|consen 78 IRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCT 133 (170)
T ss_pred HhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEee
Confidence 666565 999999999999999999999998 3567999999999998766654
No 46
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.27 E-value=0.00018 Score=68.02 Aligned_cols=101 Identities=16% Similarity=0.219 Sum_probs=65.4
Q ss_pred cccCCCCcceEEec-----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHH
Q 042362 176 KILGHGSIGGFVSH-----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQ 250 (294)
Q Consensus 176 ~lL~~~~v~~~ItH-----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~ 250 (294)
.++..+++ ++.. +|..+++||+++|+|+|+-|...++......+.+.|+++... +.+++.++|.+
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~--------d~~~La~~l~~ 384 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVE--------DAEDLAKAVTY 384 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEEC--------CHHHHHHHHHH
Confidence 45555555 3331 344569999999999999998888887777777778777653 68999999999
Q ss_pred HHcCCccHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhh
Q 042362 251 VVEQEEGQQIKRKAKELSESIKKKGDDEEINVVEKLLQL 289 (294)
Q Consensus 251 vl~~~~~~~~r~~a~~l~~~~~~~~~~~~~~~v~~l~~~ 289 (294)
+++ ++..+++..+-+...-.......+++++.+.+.
T Consensus 385 ll~---~~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~ 420 (425)
T PRK05749 385 LLT---DPDARQAYGEAGVAFLKQNQGALQRTLQLLEPY 420 (425)
T ss_pred Hhc---CHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHh
Confidence 998 444333333222222221233456666665543
No 47
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.23 E-value=2.1e-05 Score=72.31 Aligned_cols=233 Identities=16% Similarity=0.108 Sum_probs=131.8
Q ss_pred hHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhc--CCCeEeeCCCCCCCC--C----------------------CC
Q 042362 31 NKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYIT--KKETIPVGPLVQEPV--Y----------------------TD 84 (294)
Q Consensus 31 ~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~--~~~~~~VGpl~~~~~--~----------------------~~ 84 (294)
..+++.+...+ .|++++=.+|+|.-......+... -+-+++|.|-.+--. + +.
T Consensus 66 ~~~~~~~~~~~-pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~yg~ 144 (347)
T PRK14089 66 AIKEMVELAKQ-ADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILPQVWAWKKGRAKILEKYCDFLASILPFEVQFYQS 144 (347)
T ss_pred HHHHHHHHhcC-CCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCcchHHHHHHHHhhhhccCCCCHHHhCC
Confidence 34444455555 999999999999988888887763 257899999643200 0 00
Q ss_pred ------CCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCc-EEEEEeecCCCccchhccCChhhHH
Q 042362 85 ------NNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVS-FIWVVRFHSEGKFTIEEALPQSFSK 157 (294)
Q Consensus 85 ------~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~-~i~~~~~~~~~~~~~~~~lp~~~~~ 157 (294)
.+.-+.+..+-...++.++|.+--||....-...+..++++......+ .++.+..... . +.+.+
T Consensus 145 ~~~~VGhPl~d~~~~~~~~~~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~-~--------~~i~~ 215 (347)
T PRK14089 145 KATYVGHPLLDEIKEFKKDLDKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK-G--------KDLKE 215 (347)
T ss_pred CCEEECCcHHHhhhhhhhhcCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc-H--------HHHHH
Confidence 000011111101112236899999998753334444333443322111 2222221110 0 11122
Q ss_pred hhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEee-ccccchHhHHHHHH---HhCcEEEecc-
Q 042362 158 EIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV-PMVLDQLFNAKMVA---DIGVGLEVPR- 232 (294)
Q Consensus 158 ~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~na~~v~---~~G~G~~l~~- 232 (294)
.+. ....+.+.+ .-.+++..+++ .|+-+|..|+ |++.+|+|||+. ....-|+.||++++ ..|++-.+..
T Consensus 216 ~~~-~~~~~~~~~--~~~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~~~~igL~Nii~~~ 289 (347)
T PRK14089 216 IYG-DISEFEISY--DTHKALLEAEF--AFICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVKLKHIGLANIFFDF 289 (347)
T ss_pred HHh-cCCCcEEec--cHHHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHcCCeeehHHHhcCC
Confidence 120 111222222 22367777666 9999999999 999999999982 23457899999999 4565555521
Q ss_pred ---c----c-cCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcCcHHHHHHH
Q 042362 233 ---E----E-INQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKGDDEEINVV 283 (294)
Q Consensus 233 ---~----~-~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~~~~~v 283 (294)
. | ..+..|++.|.+++.+. . .+.+++...++++.+...+...+++.+
T Consensus 290 ~~~~~vvPEllQ~~~t~~~la~~i~~~-~---~~~~~~~~~~l~~~l~~~a~~~~A~~i 344 (347)
T PRK14089 290 LGKEPLHPELLQEFVTVENLLKAYKEM-D---REKFFKKSKELREYLKHGSAKNVAKIL 344 (347)
T ss_pred CcccccCchhhcccCCHHHHHHHHHHH-H---HHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 0 0 13668899999999873 2 356777777777777442233344443
No 48
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.15 E-value=0.001 Score=59.69 Aligned_cols=194 Identities=15% Similarity=0.094 Sum_probs=103.1
Q ss_pred HHHHHHhhccccEEEEcCchhhcHHHHHHHhhh--cCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCC
Q 042362 33 DRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYI--TKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGS 110 (294)
Q Consensus 33 ~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~--~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS 110 (294)
......+.+.+|.+++.|... .+.+... ...++..++....... ..........-+.. .....+++..|+
T Consensus 139 ~~~~~~~~~~~d~ii~~s~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~i~~~g~ 210 (377)
T cd03798 139 RALLRRALRRADAVIAVSEAL-----ADELKALGIDPEKVTVIPNGVDTER--FSPADRAEARKLGL-PEDKKVILFVGR 210 (377)
T ss_pred HHHHHHHHhcCCeEEeCCHHH-----HHHHHHhcCCCCceEEcCCCcCccc--CCCcchHHHHhccC-CCCceEEEEecc
Confidence 344444444489999988433 2223332 3345666665443211 00011100011111 223467778888
Q ss_pred CccC-CHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhh--cCCCCcEEecCCCcc---cccCCCCcc
Q 042362 111 EYFL-SQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQ--GNNKGMVVQGWAPQA---KILGHGSIG 184 (294)
Q Consensus 111 ~~~~-~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~v~v~~~~pq~---~lL~~~~v~ 184 (294)
.... ..+.+..++..+...+..+.+.+.+. +... +.+.+.+. +...++.+.+++++. .++..+++
T Consensus 211 ~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~-~~~~-------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~- 281 (377)
T cd03798 211 LVPRKGIDYLIEALARLLKKRPDVHLVIVGD-GPLR-------EALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADV- 281 (377)
T ss_pred CccccCHHHHHHHHHHHHhcCCCeEEEEEcC-Ccch-------HHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCe-
Confidence 6642 22333344444433322333332221 1100 11111110 135678888999875 45666666
Q ss_pred eEEe----cCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 185 GFVS----HCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 185 ~~It----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
+|. -|..+++.||+++|+|+|+-+..+ ....+.+.+.|..+.. -+.+++.++|.+++++
T Consensus 282 -~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~~~g~~~~~------~~~~~l~~~i~~~~~~ 344 (377)
T cd03798 282 -FVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDGENGLLVPP------GDPEALAEAILRLLAD 344 (377)
T ss_pred -eecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCCcceeEECC------CCHHHHHHHHHHHhcC
Confidence 552 245688999999999999866533 4455566666777743 3789999999999984
No 49
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.14 E-value=0.00097 Score=63.89 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=79.4
Q ss_pred eEEEEeCCCccCCHHHHHHHHHHHhcC-CCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc---ccc
Q 042362 103 VVYVSFGSEYFLSQEEMNEIASGLLLS-EVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---KIL 178 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~lL 178 (294)
.+++..|+... .+.+..+++++... +.+++++ +. +. .-+.+.+.. ...++.+.+++++. .++
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~iv-G~--G~-------~~~~l~~~~--~~~~V~f~G~v~~~ev~~~~ 329 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFV-GD--GP-------YREELEKMF--AGTPTVFTGMLQGDELSQAY 329 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEE-eC--Ch-------HHHHHHHHh--ccCCeEEeccCCHHHHHHHH
Confidence 45566788763 33455566666554 4555544 32 11 112222233 34578888999865 466
Q ss_pred CCCCcceEEecCC----chHHHHHHHhCCcEEeeccccchHhHHHHHHH---hCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 179 GHGSIGGFVSHCG----WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD---IGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 179 ~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~---~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
..+++ ||.-.. ..+++||+++|+|+|+.... .....+.+ .+.|..+.. -+.+++.++|.++
T Consensus 330 ~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv~~~~~~~~G~lv~~------~d~~~la~~i~~l 397 (465)
T PLN02871 330 ASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDIIPPDQEGKTGFLYTP------GDVDDCVEKLETL 397 (465)
T ss_pred HHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhhhcCCCCCceEEeCC------CCHHHHHHHHHHH
Confidence 66666 775433 45789999999999987543 23344455 578888853 2679999999999
Q ss_pred HcC
Q 042362 252 VEQ 254 (294)
Q Consensus 252 l~~ 254 (294)
+++
T Consensus 398 l~~ 400 (465)
T PLN02871 398 LAD 400 (465)
T ss_pred HhC
Confidence 973
No 50
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.10 E-value=0.00093 Score=59.68 Aligned_cols=81 Identities=21% Similarity=0.283 Sum_probs=60.3
Q ss_pred CCCCcEEecCCCcc---cccCCCCcceEEe----cCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccc
Q 042362 162 NNKGMVVQGWAPQA---KILGHGSIGGFVS----HCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREE 234 (294)
Q Consensus 162 ~~~~v~v~~~~pq~---~lL~~~~v~~~It----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 234 (294)
...++.+.+++++. .++..+++ +|. -|..+++.||+++|+|+|+.+. ......+.+.+.|..+..
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~~~g~~~~~-- 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDGETGLLVPP-- 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCCcceEEeCC--
Confidence 45678888999755 46766666 663 2456789999999999998765 334555565678888753
Q ss_pred cCCcccHHHHHHHHHHHHcC
Q 042362 235 INQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 235 ~~~~~t~~~l~~ai~~vl~~ 254 (294)
.+.+++.++|.+++.+
T Consensus 326 ----~~~~~l~~~i~~~~~~ 341 (374)
T cd03801 326 ----GDPEALAEAILRLLDD 341 (374)
T ss_pred ----CCHHHHHHHHHHHHcC
Confidence 3589999999999973
No 51
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.09 E-value=0.0004 Score=62.90 Aligned_cols=132 Identities=18% Similarity=0.179 Sum_probs=78.1
Q ss_pred CceEEEEeCCCccC-CHHHHHHHHHHHhcC-CCcEEEEEeecCCCccchhccCChhhHHhh-hcCCCCcEEecCCCcc--
Q 042362 101 SSVVYVSFGSEYFL-SQEEMNEIASGLLLS-EVSFIWVVRFHSEGKFTIEEALPQSFSKEI-QGNNKGMVVQGWAPQA-- 175 (294)
Q Consensus 101 ~~vVyvs~GS~~~~-~~~~~~~l~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~v~v~~~~pq~-- 175 (294)
.+.+++..|+.... ..+.+.+.+..+... +.++++. +... .. +.+.+.+ .....++.+.+++++.
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~-G~~~-~~--------~~~~~~~~~~~~~~v~~~g~~~~~~~ 288 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIV-GDGP-EK--------EELKELAKALGLDNVTFLGRVPKEEL 288 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEe-CCcc-cH--------HHHHHHHHHcCCCcEEEeCCCChHHH
Confidence 44777788887642 234444444444333 4555443 3211 10 1111100 0144678888999876
Q ss_pred -cccCCCCcceEEecCC---------chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHH
Q 042362 176 -KILGHGSIGGFVSHCG---------WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLA 245 (294)
Q Consensus 176 -~lL~~~~v~~~ItHgG---------~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~ 245 (294)
.++..+++ +|.... -+++.||+++|+|+|+.+..+.+.. +.+.+.|..+.. -+.+++.
T Consensus 289 ~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~~~~g~~~~~------~~~~~l~ 356 (394)
T cd03794 289 PELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEEAGAGLVVPP------GDPEALA 356 (394)
T ss_pred HHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hccCCcceEeCC------CCHHHHH
Confidence 45666666 554322 3447999999999999887654332 233377777752 2789999
Q ss_pred HHHHHHHcC
Q 042362 246 RVIKQVVEQ 254 (294)
Q Consensus 246 ~ai~~vl~~ 254 (294)
++|.+++.+
T Consensus 357 ~~i~~~~~~ 365 (394)
T cd03794 357 AAILELLDD 365 (394)
T ss_pred HHHHHHHhC
Confidence 999999963
No 52
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.09 E-value=0.00036 Score=63.28 Aligned_cols=130 Identities=15% Similarity=0.145 Sum_probs=79.6
Q ss_pred eEEEEeCCCccCCHHHHHHHHHHHhcCC-CcEEEEEeecCCCccchhccCChhhHHhh--hcCCCCcEEecCCCcc---c
Q 042362 103 VVYVSFGSEYFLSQEEMNEIASGLLLSE-VSFIWVVRFHSEGKFTIEEALPQSFSKEI--QGNNKGMVVQGWAPQA---K 176 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~~al~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~v~v~~~~pq~---~ 176 (294)
.+++..|+... ......+++++.... ..+++.-. +.. .+.+.+.+ .+...++.+.+|+|+. .
T Consensus 192 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~---g~~-------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~ 259 (357)
T cd03795 192 PFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGE---GPL-------EAELEALAAALGLLDRVRFLGRLDDEEKAA 259 (357)
T ss_pred cEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeC---Chh-------HHHHHHHHHhcCCcceEEEcCCCCHHHHHH
Confidence 56777887653 234555666665555 45444422 110 01111111 0145689999999975 4
Q ss_pred ccCCCCcceEEec---CC-chHHHHHHHhCCcEEeeccccchHhHHHHHHH-hCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 177 ILGHGSIGGFVSH---CG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD-IGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 177 lL~~~~v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
++..+++.++.++ -| ..+++||+++|+|+|+....+.. ..+.. .+.|..+.. -+.+++.++|.++
T Consensus 260 ~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~~~g~~~~~------~d~~~~~~~i~~l 329 (357)
T cd03795 260 LLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHGVTGLVVPP------GDPAALAEAIRRL 329 (357)
T ss_pred HHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCCCceEEeCC------CCHHHHHHHHHHH
Confidence 6666666333332 23 35799999999999997654433 33333 577877742 3689999999999
Q ss_pred HcC
Q 042362 252 VEQ 254 (294)
Q Consensus 252 l~~ 254 (294)
+++
T Consensus 330 ~~~ 332 (357)
T cd03795 330 LED 332 (357)
T ss_pred HHC
Confidence 983
No 53
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.06 E-value=0.001 Score=62.67 Aligned_cols=83 Identities=18% Similarity=0.313 Sum_probs=59.9
Q ss_pred CCCcEEecCCCccc---ccCCCCcceEEecCC----chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccccc
Q 042362 163 NKGMVVQGWAPQAK---ILGHGSIGGFVSHCG----WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEI 235 (294)
Q Consensus 163 ~~~v~v~~~~pq~~---lL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~ 235 (294)
..++.+.+|+++.+ ++..+++++|+...- .++++||+++|+|+|+-... .....+.+.+.|..+.
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i~~~~~G~l~~---- 359 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIVDNGGNGLLLS---- 359 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHhcCCCcEEEeC----
Confidence 45688889999764 444445556776553 47899999999999986543 2445555555898885
Q ss_pred CCcccHHHHHHHHHHHHcC
Q 042362 236 NQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 236 ~~~~t~~~l~~ai~~vl~~ 254 (294)
..-+.+++.++|.+++++
T Consensus 360 -~~~~~~~la~~I~~ll~~ 377 (407)
T cd04946 360 -KDPTPNELVSSLSKFIDN 377 (407)
T ss_pred -CCCCHHHHHHHHHHHHhC
Confidence 234789999999999973
No 54
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.05 E-value=3.3e-05 Score=71.04 Aligned_cols=132 Identities=14% Similarity=0.176 Sum_probs=81.0
Q ss_pred CCceEEEEeCCCccC-CHHHHHHHHHHHhcCCC-cEEEEEeecCCCccchhccCChhhHHhhhc-C--CCCcEEecCCCc
Q 042362 100 PSSVVYVSFGSEYFL-SQEEMNEIASGLLLSEV-SFIWVVRFHSEGKFTIEEALPQSFSKEIQG-N--NKGMVVQGWAPQ 174 (294)
Q Consensus 100 ~~~vVyvs~GS~~~~-~~~~~~~l~~al~~~~~-~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~-~--~~~v~v~~~~pq 174 (294)
++++|++++|..... ..+.+..+++++..... ++.++........ +.+.+.... . ..++.+.+..++
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~--------~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTR--------PRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChH--------HHHHHHHHhhccCCCCEEEECCcCH
Confidence 345788888877643 34567777777765322 2333332211111 112111110 1 356777666554
Q ss_pred c---cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 175 A---KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 175 ~---~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
. .++..+++ ||+..| +.+.||+++|+|+|+++.. |. +..+.+.|+++.+.. +.++|.++|.++
T Consensus 269 ~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~g~~~~~~~-------~~~~i~~~i~~l 334 (363)
T cd03786 269 LYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVESGTNVLVGT-------DPEAILAAIEKL 334 (363)
T ss_pred HHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhheeeEEecCC-------CHHHHHHHHHHH
Confidence 4 44555555 999999 7788999999999998743 22 445566787776631 479999999999
Q ss_pred Hc
Q 042362 252 VE 253 (294)
Q Consensus 252 l~ 253 (294)
++
T Consensus 335 l~ 336 (363)
T cd03786 335 LS 336 (363)
T ss_pred hc
Confidence 97
No 55
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.00 E-value=0.00023 Score=65.20 Aligned_cols=126 Identities=13% Similarity=0.088 Sum_probs=80.1
Q ss_pred EEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc---cccCC
Q 042362 104 VYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---KILGH 180 (294)
Q Consensus 104 Vyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~lL~~ 180 (294)
.++..|+... .+....+++++...+.+++++-... .. +.+.+ . ...++.+.+++|+. .++..
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~--~~--------~~l~~-~--~~~~V~~~g~~~~~~~~~~~~~ 261 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGP--EL--------DRLRA-K--AGPNVTFLGRVSDEELRDLYAR 261 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECCh--hH--------HHHHh-h--cCCCEEEecCCCHHHHHHHHHh
Confidence 3556677653 3445667777777777765543211 10 11111 1 56789999999985 56777
Q ss_pred CCcceEEecCCc-hHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 181 GSIGGFVSHCGW-GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 181 ~~v~~~ItHgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
+++-++-+.-|. .+++||+++|+|+|+....+ ....+.+.+.|..+.. -+.+++.++|.+++++
T Consensus 262 ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~~~------~~~~~la~~i~~l~~~ 326 (351)
T cd03804 262 ARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDGVTGILFEE------QTVESLAAAVERFEKN 326 (351)
T ss_pred CCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEeCC------CCHHHHHHHHHHHHhC
Confidence 776332233332 56789999999999976533 2334555578888853 3688899999999974
No 56
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=98.00 E-value=9.2e-05 Score=57.85 Aligned_cols=109 Identities=20% Similarity=0.243 Sum_probs=69.2
Q ss_pred EEEEeCCCccCCHHHHHH--HHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCC--Ccc-ccc
Q 042362 104 VYVSFGSEYFLSQEEMNE--IASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWA--PQA-KIL 178 (294)
Q Consensus 104 Vyvs~GS~~~~~~~~~~~--l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~--pq~-~lL 178 (294)
+||+-||....-...+.. +.+-.+....++|..++..+. .| -.+..+.+|. +.. .+.
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~--------kp----------vagl~v~~F~~~~kiQsli 63 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDI--------KP----------VAGLRVYGFDKEEKIQSLI 63 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCc--------cc----------ccccEEEeechHHHHHHHh
Confidence 689999985421222211 111112233477888875321 11 1234444554 333 455
Q ss_pred CCCCcceEEecCCchHHHHHHHhCCcEEeecccc--------chHhHHHHHHHhCcEEEecc
Q 042362 179 GHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVL--------DQLFNAKMVADIGVGLEVPR 232 (294)
Q Consensus 179 ~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~--------DQ~~na~~v~~~G~G~~l~~ 232 (294)
..++ .+|+|||.||++.++..++|.|++|-.. .|..-|..+.+.+.=+...+
T Consensus 64 ~dar--IVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~sp 123 (161)
T COG5017 64 HDAR--IVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSP 123 (161)
T ss_pred hcce--EEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcC
Confidence 5555 4999999999999999999999999532 47778888998887777753
No 57
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.99 E-value=0.0029 Score=59.02 Aligned_cols=113 Identities=12% Similarity=0.152 Sum_probs=70.2
Q ss_pred CCCCcEEecCCCcc---cccCCCCcceEEecC----C-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccc
Q 042362 162 NNKGMVVQGWAPQA---KILGHGSIGGFVSHC----G-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRE 233 (294)
Q Consensus 162 ~~~~v~v~~~~pq~---~lL~~~~v~~~ItHg----G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~ 233 (294)
.+.++.+.+++|+. .++..+++ +|... | ..+++||+++|+|+|+.... .+...+.+...|..+.
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~~~~G~~l~-- 326 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLEGITGYHLA-- 326 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhcccCCceEEEe--
Confidence 34577888999865 45777666 66433 3 26788999999999997653 2444555556787552
Q ss_pred ccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHh-cC-cHHHHHHHHHHHh
Q 042362 234 EINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKK-KG-DDEEINVVEKLLQ 288 (294)
Q Consensus 234 ~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~-~~-~~~~~~~v~~l~~ 288 (294)
...+.+++.++|.+++++ ++.++..++-++.+.+ .. ...++++.+.+.+
T Consensus 327 ---~~~d~~~la~~I~~ll~d---~~~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 327 ---EPMTSDSIISDINRTLAD---PELTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred ---CCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 224789999999999984 4333323222222222 23 4445555555544
No 58
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.99 E-value=0.0012 Score=59.49 Aligned_cols=131 Identities=19% Similarity=0.127 Sum_probs=79.1
Q ss_pred CceEEEEeCCCccCC-HHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc---c
Q 042362 101 SSVVYVSFGSEYFLS-QEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---K 176 (294)
Q Consensus 101 ~~vVyvs~GS~~~~~-~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~ 176 (294)
.+.+++..|+..... .+.+.+++..+...++++++. +..... ....... ....++.+.+|+++. .
T Consensus 190 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~-~~~~~~~---------~~~~~v~~~g~~~~~~~~~ 258 (359)
T cd03823 190 GRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLEL-EEESYEL---------EGDPRVEFLGAYPQEEIDD 258 (359)
T ss_pred CceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchhh-hHHHHhh---------cCCCeEEEeCCCCHHHHHH
Confidence 446777788865422 233333333333335666554 321110 0000000 145688889999766 4
Q ss_pred ccCCCCcceEEec-----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 177 ILGHGSIGGFVSH-----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 177 lL~~~~v~~~ItH-----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
++..+++ +|+. |...+++||+++|+|+|+.+.. .....+.+.+.|..+.. -+.+++.++|.++
T Consensus 259 ~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~~~------~d~~~l~~~i~~l 326 (359)
T cd03823 259 FYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDGVNGLLFPP------GDAEDLAAALERL 326 (359)
T ss_pred HHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCCCcEEEECC------CCHHHHHHHHHHH
Confidence 5777666 6632 2345799999999999986543 34555666667888853 2589999999999
Q ss_pred HcC
Q 042362 252 VEQ 254 (294)
Q Consensus 252 l~~ 254 (294)
+++
T Consensus 327 ~~~ 329 (359)
T cd03823 327 IDD 329 (359)
T ss_pred HhC
Confidence 973
No 59
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.98 E-value=0.002 Score=57.62 Aligned_cols=135 Identities=20% Similarity=0.181 Sum_probs=78.5
Q ss_pred CceEEEEeCCCccC-CHHHHHHHHHHHhc--CCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc-c
Q 042362 101 SSVVYVSFGSEYFL-SQEEMNEIASGLLL--SEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA-K 176 (294)
Q Consensus 101 ~~vVyvs~GS~~~~-~~~~~~~l~~al~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~-~ 176 (294)
++++++..|+.... ..+.+.+.+..+.+ .+.++++.-... .. .... ....... ....++.+.++..+. .
T Consensus 187 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~-~~-~~~~----~~~~~~~-~~~~~v~~~g~~~~~~~ 259 (359)
T cd03808 187 DDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGD-EE-NPAA----ILEIEKL-GLEGRVEFLGFRDDVPE 259 (359)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCC-cc-hhhH----HHHHHhc-CCcceEEEeeccccHHH
Confidence 44778888887642 23444444444443 344554443221 11 0000 0000111 134567777774443 5
Q ss_pred ccCCCCcceEEecCC----chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHH
Q 042362 177 ILGHGSIGGFVSHCG----WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 177 lL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl 252 (294)
++..+++ +|.... .+++.||+++|+|+|+-+... ....+.+.+.|..+.. -+.+++.++|.+++
T Consensus 260 ~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~~~g~~~~~------~~~~~~~~~i~~l~ 327 (359)
T cd03808 260 LLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDGVNGFLVPP------GDAEALADAIERLI 327 (359)
T ss_pred HHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcCcceEEECC------CCHHHHHHHHHHHH
Confidence 6777666 665433 578999999999999965533 3445555678887753 36899999999988
Q ss_pred cC
Q 042362 253 EQ 254 (294)
Q Consensus 253 ~~ 254 (294)
.+
T Consensus 328 ~~ 329 (359)
T cd03808 328 ED 329 (359)
T ss_pred hC
Confidence 73
No 60
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.98 E-value=7.8e-05 Score=70.71 Aligned_cols=172 Identities=17% Similarity=0.273 Sum_probs=89.6
Q ss_pred CceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHH-hhhcCCCCcEEecCCCcccccC
Q 042362 101 SSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSK-EIQGNNKGMVVQGWAPQAKILG 179 (294)
Q Consensus 101 ~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~v~v~~~~pq~~lL~ 179 (294)
..++|.+|.+....+++.+...++.|++.+-..+|....+... +..+-..+.+ .+ ...++++.++.|+.+-|.
T Consensus 284 d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~----~~~l~~~~~~~Gv--~~~Ri~f~~~~~~~ehl~ 357 (468)
T PF13844_consen 284 DAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG----EARLRRRFAAHGV--DPDRIIFSPVAPREEHLR 357 (468)
T ss_dssp SSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH----HHHHHHHHHHTTS---GGGEEEEE---HHHHHH
T ss_pred CceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH----HHHHHHHHHHcCC--ChhhEEEcCCCCHHHHHH
Confidence 3499999999999999999999999999898899987643211 1111111111 01 235677777777653322
Q ss_pred -CCCcceEEe---cCCchHHHHHHHhCCcEEeeccc-cchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 180 -HGSIGGFVS---HCGWGSTVEGIMYGVPIIAVPMV-LDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 180 -~~~v~~~It---HgG~~s~~Eal~~GvP~i~~P~~-~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
+..+++++. .+|.+|++|||++|||+|.+|-- .=...-+..+...|+.-.+-. +.++-.+.-.++-+
T Consensus 358 ~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~-------s~~eYv~~Av~La~- 429 (468)
T PF13844_consen 358 RYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD-------SEEEYVEIAVRLAT- 429 (468)
T ss_dssp HGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S-------SHHHHHHHHHHHHH-
T ss_pred HhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC-------CHHHHHHHHHHHhC-
Confidence 223344553 46889999999999999999942 233445567777898877753 44444444434444
Q ss_pred CccHHHH-HHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 042362 255 EEGQQIK-RKAKELSESIKKKGDDEEINVVEKLLQ 288 (294)
Q Consensus 255 ~~~~~~r-~~a~~l~~~~~~~~~~~~~~~v~~l~~ 288 (294)
+.+++ +--+++++.+...+--....+.+.++.
T Consensus 430 --D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~ 462 (468)
T PF13844_consen 430 --DPERLRALRAKLRDRRSKSPLFDPKRFARNLEA 462 (468)
T ss_dssp ---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHH
Confidence 33333 333344445544443334555555544
No 61
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.95 E-value=8.4e-05 Score=68.78 Aligned_cols=106 Identities=15% Similarity=0.219 Sum_probs=70.3
Q ss_pred CCCcEEecCCCcc---cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcc
Q 042362 163 NKGMVVQGWAPQA---KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRV 239 (294)
Q Consensus 163 ~~~v~v~~~~pq~---~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~ 239 (294)
..++.+.+.+++. .++.++++ +|+-.|.. +.||+++|+|+|..+-..+++. +.+.|.+..+. .
T Consensus 254 ~~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~g~~~lv~-------~ 319 (365)
T TIGR00236 254 SKRVHLIEPLEYLDFLNLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEAGTNKLVG-------T 319 (365)
T ss_pred CCCEEEECCCChHHHHHHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhcCceEEeC-------C
Confidence 3568777766654 45566555 89987654 7999999999999876555442 33467777664 2
Q ss_pred cHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHh
Q 042362 240 RKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 288 (294)
Q Consensus 240 t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~ 288 (294)
+.++|.+++.+++. ++..++++.+-. ...+ ..+..++++.|..
T Consensus 320 d~~~i~~ai~~ll~---~~~~~~~~~~~~---~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 320 DKENITKAAKRLLT---DPDEYKKMSNAS---NPYGDGEASERIVEELLN 363 (365)
T ss_pred CHHHHHHHHHHHHh---ChHHHHHhhhcC---CCCcCchHHHHHHHHHHh
Confidence 68999999999997 455554443322 2222 4456677776654
No 62
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.90 E-value=0.0034 Score=56.76 Aligned_cols=79 Identities=24% Similarity=0.408 Sum_probs=55.4
Q ss_pred CCCcEEec-CCCcc---cccCCCCcceEEe--c----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecc
Q 042362 163 NKGMVVQG-WAPQA---KILGHGSIGGFVS--H----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPR 232 (294)
Q Consensus 163 ~~~v~v~~-~~pq~---~lL~~~~v~~~It--H----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~ 232 (294)
..++.+.+ |+|+. .++..+++ +|. + |..++++||+++|+|+|+.+..+ ...+.+.+.|..+..
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~~~~~ 318 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGLLVPP 318 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcEEEcC
Confidence 45676664 48765 56666666 552 2 33568999999999999977643 333455677877753
Q ss_pred cccCCcccHHHHHHHHHHHHcC
Q 042362 233 EEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 233 ~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++++
T Consensus 319 ------~d~~~~~~~l~~l~~~ 334 (366)
T cd03822 319 ------GDPAALAEAIRRLLAD 334 (366)
T ss_pred ------CCHHHHHHHHHHHHcC
Confidence 3589999999999984
No 63
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.88 E-value=0.0046 Score=57.48 Aligned_cols=238 Identities=15% Similarity=0.174 Sum_probs=125.3
Q ss_pred CcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCC-CceEEE
Q 042362 28 GTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEP-SSVVYV 106 (294)
Q Consensus 28 g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~-~~vVyv 106 (294)
++....++.+.+.++.|+++..| +.|.+.+..+. -+++.-.|-|=-+.. .......+...|-..-+. + .+.|
T Consensus 163 ~y~k~~~~~~~~~~~i~li~aQs--e~D~~Rf~~LG---a~~v~v~GNlKfd~~-~~~~~~~~~~~~r~~l~~~r-~v~i 235 (419)
T COG1519 163 RYAKLKFLARLLFKNIDLILAQS--EEDAQRFRSLG---AKPVVVTGNLKFDIE-PPPQLAAELAALRRQLGGHR-PVWV 235 (419)
T ss_pred HHHHHHHHHHHHHHhcceeeecC--HHHHHHHHhcC---CcceEEecceeecCC-CChhhHHHHHHHHHhcCCCC-ceEE
Confidence 45567777888877789999988 34444332222 244777776632211 111122233333332222 3 4566
Q ss_pred EeCCCccCCHHHHHHHHHHHhcC--CCcEEEEEeecCCCccchhccCCh--hhH--Hhhh----cCCCCcEEecCCCcc-
Q 042362 107 SFGSEYFLSQEEMNEIASGLLLS--EVSFIWVVRFHSEGKFTIEEALPQ--SFS--KEIQ----GNNKGMVVQGWAPQA- 175 (294)
Q Consensus 107 s~GS~~~~~~~~~~~l~~al~~~--~~~~i~~~~~~~~~~~~~~~~lp~--~~~--~~~~----~~~~~v~v~~~~pq~- 175 (294)
..+|. ....+.+.+...+|.+. +.-.||+=+.+. .-.+.++ +-. ++. .|.. ..+.++++.+-+--+
T Consensus 236 aaSTH-~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-Rf~~v~~-l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~ 312 (419)
T COG1519 236 AASTH-EGEEEIILDAHQALKKQFPNLLLILVPRHPE-RFKAVEN-LLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELG 312 (419)
T ss_pred EecCC-CchHHHHHHHHHHHHhhCCCceEEEecCChh-hHHHHHH-HHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHH
Confidence 66663 22344455555666443 345666633221 0000000 000 000 0000 012234443333222
Q ss_pred cccCCCCc---c-eEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 176 KILGHGSI---G-GFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 176 ~lL~~~~v---~-~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
.+++-+++ + -|+-+||+| .+|++++|+|+|.=|+...|..-++++...|+|+.+. +.+.+.+++..+
T Consensus 313 l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~--------~~~~l~~~v~~l 383 (419)
T COG1519 313 LLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE--------DADLLAKAVELL 383 (419)
T ss_pred HHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC--------CHHHHHHHHHHh
Confidence 12222222 1 145588887 8999999999999999999999999999999999995 378888888888
Q ss_pred HcCCccHHHHHHHH-HHHHHHHhcCcHHHHHHHHHHHh
Q 042362 252 VEQEEGQQIKRKAK-ELSESIKKKGDDEEINVVEKLLQ 288 (294)
Q Consensus 252 l~~~~~~~~r~~a~-~l~~~~~~~~~~~~~~~v~~l~~ 288 (294)
+.+ +..+++.. +..+.+.+ ...++++.++.|..
T Consensus 384 ~~~---~~~r~~~~~~~~~~v~~-~~gal~r~l~~l~~ 417 (419)
T COG1519 384 LAD---EDKREAYGRAGLEFLAQ-NRGALARTLEALKP 417 (419)
T ss_pred cCC---HHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhh
Confidence 873 33333332 22222222 12255666655543
No 64
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.85 E-value=0.0051 Score=57.76 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=69.6
Q ss_pred CCcEEecCCCcc---cccCCCCcceEEecCCc------hHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccc
Q 042362 164 KGMVVQGWAPQA---KILGHGSIGGFVSHCGW------GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREE 234 (294)
Q Consensus 164 ~~v~v~~~~pq~---~lL~~~~v~~~ItHgG~------~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 234 (294)
.++.+.+|+|+. .++..+++.++.+..+. +.+.|++++|+|+|+....+.. ....+. +.|+.+..
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~--~~G~~~~~-- 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE--GIGVCVEP-- 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh--CCcEEeCC--
Confidence 478888999875 46777777555555432 3478999999999998654311 112222 78888853
Q ss_pred cCCcccHHHHHHHHHHHHcCCc-cHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHhhc
Q 042362 235 INQRVRKKDLARVIKQVVEQEE-GQQIKRKAKELSESIKKKG-DDEEINVVEKLLQLV 290 (294)
Q Consensus 235 ~~~~~t~~~l~~ai~~vl~~~~-~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~~~ 290 (294)
-+.++++++|.+++++++ ...+++++++..+. ... ...++.+++.+.++.
T Consensus 358 ----~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~--~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 358 ----ESVEALVAAIAALARQALLRPKLGTVAREYAER--TLDKENVLRQFIADIRGLV 409 (412)
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHh
Confidence 368999999999987311 12334444332211 122 344555555555543
No 65
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.85 E-value=0.0029 Score=57.92 Aligned_cols=80 Identities=16% Similarity=0.182 Sum_probs=56.6
Q ss_pred CCCcEEecCCCcc-cccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCC
Q 042362 163 NKGMVVQGWAPQA-KILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQ 237 (294)
Q Consensus 163 ~~~v~v~~~~pq~-~lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~ 237 (294)
..++.+.++.++. .++..+++ +|.- |...++.||+++|+|+|+.... ..+..+.+-..|..++.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~~~G~~~~~----- 320 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHGETGFLVDV----- 320 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCCCceEEcCC-----
Confidence 3567777877654 56776666 5532 3356999999999999986543 34555555567877753
Q ss_pred cccHHHHHHHHHHHHcC
Q 042362 238 RVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++.+
T Consensus 321 -~~~~~l~~~i~~l~~~ 336 (371)
T cd04962 321 -GDVEAMAEYALSLLED 336 (371)
T ss_pred -CCHHHHHHHHHHHHhC
Confidence 3689999999999973
No 66
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.82 E-value=0.00064 Score=62.65 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=63.7
Q ss_pred CCCcEEecCCCcc-cccCCCCcceEEec--CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcc
Q 042362 163 NKGMVVQGWAPQA-KILGHGSIGGFVSH--CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRV 239 (294)
Q Consensus 163 ~~~v~v~~~~pq~-~lL~~~~v~~~ItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~ 239 (294)
..++.+.++.++. .++..+++-++.++ |...+++||+++|+|+|+..... .....+.+...|..+.. -
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~~~G~lv~~------~ 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDGENGYLVPK------G 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccCCCceEeCC------C
Confidence 4567777776654 57777777555554 33568999999999999965431 13344555578888853 3
Q ss_pred cHHHHHHHHHHHHcCCc-cHHHHHHHHHH
Q 042362 240 RKKDLARVIKQVVEQEE-GQQIKRKAKEL 267 (294)
Q Consensus 240 t~~~l~~ai~~vl~~~~-~~~~r~~a~~l 267 (294)
+.+++.++|.+++.+++ -..+.+++++.
T Consensus 331 d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 359 (372)
T cd04949 331 DIEALAEAIIELLNDPKLLQKFSEAAYEN 359 (372)
T ss_pred cHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 68999999999998421 12344444443
No 67
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.82 E-value=0.0028 Score=58.52 Aligned_cols=80 Identities=18% Similarity=0.236 Sum_probs=59.5
Q ss_pred CCCcEEecCCCccc---ccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccccc
Q 042362 163 NKGMVVQGWAPQAK---ILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEI 235 (294)
Q Consensus 163 ~~~v~v~~~~pq~~---lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~ 235 (294)
..++.+.+|+|+.+ ++..+++ +++. +-..+++||+++|+|+|+-+..+ ....+.+.+.|..+..
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~~~g~~~~~--- 352 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDGVTGLLVDP--- 352 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCCCCeEEeCC---
Confidence 46788899999864 4666666 6643 22468999999999999876433 4555666678988853
Q ss_pred CCcccHHHHHHHHHHHHcC
Q 042362 236 NQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 236 ~~~~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++.+
T Consensus 353 ---~~~~~l~~~i~~l~~~ 368 (398)
T cd03800 353 ---RDPEALAAALRRLLTD 368 (398)
T ss_pred ---CCHHHHHHHHHHHHhC
Confidence 3689999999999973
No 68
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.81 E-value=0.0051 Score=54.67 Aligned_cols=89 Identities=19% Similarity=0.374 Sum_probs=58.7
Q ss_pred CCCcEEecCCCcc-cccCCCCcceEEecCC----chHHHHHHHhCCcEEeeccccchHhHHHHHHHhC-cEEEecccccC
Q 042362 163 NKGMVVQGWAPQA-KILGHGSIGGFVSHCG----WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIG-VGLEVPREEIN 236 (294)
Q Consensus 163 ~~~v~v~~~~pq~-~lL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~ 236 (294)
..++.+.++.... .++..+++ +|.... .++++||+++|+|+|+.+....+ ..+...+ .|..+..
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~~~~g~~~~~---- 303 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIEDGVNGLLVPN---- 303 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCch----HhhhccCcceEEeCC----
Confidence 4456666663332 56776665 665542 57899999999999987654432 2344444 8887753
Q ss_pred CcccHHHHHHHHHHHHcCCccHHHHHHHHH
Q 042362 237 QRVRKKDLARVIKQVVEQEEGQQIKRKAKE 266 (294)
Q Consensus 237 ~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~ 266 (294)
.+.+++.++|.++++ +++.++++.+
T Consensus 304 --~~~~~~~~~i~~ll~---~~~~~~~~~~ 328 (348)
T cd03820 304 --GDVEALAEALLRLME---DEELRKRMGA 328 (348)
T ss_pred --CCHHHHHHHHHHHHc---CHHHHHHHHH
Confidence 357999999999998 4544444333
No 69
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.80 E-value=0.0027 Score=57.27 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=57.8
Q ss_pred CCCCcEEecCCCcc---cccCCCCcceEEecC----CchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccc
Q 042362 162 NNKGMVVQGWAPQA---KILGHGSIGGFVSHC----GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREE 234 (294)
Q Consensus 162 ~~~~v~v~~~~pq~---~lL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 234 (294)
...++.+.+++|+. .++..+++ +|..+ ...++.||+++|+|+|+.+.. ..+..+.+.+.|..+..+
T Consensus 257 ~~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~~~g~~~~~~- 329 (374)
T cd03817 257 LADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADGENGFLFPPG- 329 (374)
T ss_pred CCCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecCceeEEeCCC-
Confidence 35688888999876 45667666 66433 347899999999999987643 345555666788888531
Q ss_pred cCCcccHHHHHHHHHHHHcC
Q 042362 235 INQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 235 ~~~~~t~~~l~~ai~~vl~~ 254 (294)
+. ++.++|.+++++
T Consensus 330 -----~~-~~~~~i~~l~~~ 343 (374)
T cd03817 330 -----DE-ALAEALLRLLQD 343 (374)
T ss_pred -----CH-HHHHHHHHHHhC
Confidence 22 899999999974
No 70
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.76 E-value=0.005 Score=56.95 Aligned_cols=84 Identities=20% Similarity=0.338 Sum_probs=53.8
Q ss_pred CcE-EecCCCcc---cccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccC
Q 042362 165 GMV-VQGWAPQA---KILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEIN 236 (294)
Q Consensus 165 ~v~-v~~~~pq~---~lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~ 236 (294)
++. +.+++++. .++..+++ +|.- +...+++||+++|+|+|+.... .....+.+.+.|..+..++..
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~~~G~~~~~~~~~ 334 (388)
T TIGR02149 261 GIIWINKMLPKEELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDGETGFLVPPDNSD 334 (388)
T ss_pred ceEEecCCCCHHHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCCCceEEcCCCCCc
Confidence 344 34677754 56777666 6643 2246789999999999986543 355556666788888642100
Q ss_pred CcccHHHHHHHHHHHHcC
Q 042362 237 QRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 237 ~~~t~~~l~~ai~~vl~~ 254 (294)
..-..+++.++|.+++++
T Consensus 335 ~~~~~~~l~~~i~~l~~~ 352 (388)
T TIGR02149 335 ADGFQAELAKAINILLAD 352 (388)
T ss_pred ccchHHHHHHHHHHHHhC
Confidence 011128999999999873
No 71
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.75 E-value=0.0036 Score=56.41 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=56.9
Q ss_pred CCCCcEEecCCCcc---cccCCCCcceEEecC----CchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccc
Q 042362 162 NNKGMVVQGWAPQA---KILGHGSIGGFVSHC----GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREE 234 (294)
Q Consensus 162 ~~~~v~v~~~~pq~---~lL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 234 (294)
...++.+.+|+++. .++..+++ +|.-. -.+++.||+++|+|+|+-+.. .....+.+ +.|.....
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~~~-~~~~~~~~-- 330 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELIEY-GCGWVVDD-- 330 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHhhc-CceEEeCC--
Confidence 35678889999965 45677666 55432 257899999999999997643 23444445 78887752
Q ss_pred cCCcccHHHHHHHHHHHHcC
Q 042362 235 INQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 235 ~~~~~t~~~l~~ai~~vl~~ 254 (294)
+.+++.++|.+++++
T Consensus 331 -----~~~~~~~~i~~l~~~ 345 (375)
T cd03821 331 -----DVDALAAALRRALEL 345 (375)
T ss_pred -----ChHHHHHHHHHHHhC
Confidence 349999999999973
No 72
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.74 E-value=0.0038 Score=56.52 Aligned_cols=81 Identities=22% Similarity=0.300 Sum_probs=57.8
Q ss_pred CCCCcEEecCCCcc---cccCCCCcceEEe----------cCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEE
Q 042362 162 NNKGMVVQGWAPQA---KILGHGSIGGFVS----------HCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGL 228 (294)
Q Consensus 162 ~~~~v~v~~~~pq~---~lL~~~~v~~~It----------HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~ 228 (294)
...++.+.+++|+. .++..+++ +|. -|..++++||+++|+|+|+.+... ....+.+...|.
T Consensus 234 ~~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~ 307 (355)
T cd03799 234 LEDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGL 307 (355)
T ss_pred CCCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceE
Confidence 35678899999865 46666666 555 233578999999999999876532 223344445888
Q ss_pred EecccccCCcccHHHHHHHHHHHHcC
Q 042362 229 EVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 229 ~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.+.. -+.+++.++|.+++.+
T Consensus 308 ~~~~------~~~~~l~~~i~~~~~~ 327 (355)
T cd03799 308 LVPP------GDPEALADAIERLLDD 327 (355)
T ss_pred EeCC------CCHHHHHHHHHHHHhC
Confidence 8752 2789999999999974
No 73
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.71 E-value=0.013 Score=54.58 Aligned_cols=80 Identities=16% Similarity=0.126 Sum_probs=57.9
Q ss_pred CCCcEEecCCCcc---cccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccccc
Q 042362 163 NKGMVVQGWAPQA---KILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEI 235 (294)
Q Consensus 163 ~~~v~v~~~~pq~---~lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~ 235 (294)
..++.+.+++|.. .+|..+++ +|.- |...+++||+++|+|+|+....+ ....+.+...|..+..
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~--- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADGETGLLVDG--- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccCCceEECCC---
Confidence 4578888999865 56777766 5532 33468999999999999865432 3344555577887753
Q ss_pred CCcccHHHHHHHHHHHHcC
Q 042362 236 NQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 236 ~~~~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++++
T Consensus 353 ---~d~~~la~~i~~~l~~ 368 (405)
T TIGR03449 353 ---HDPADWADALARLLDD 368 (405)
T ss_pred ---CCHHHHHHHHHHHHhC
Confidence 3689999999999973
No 74
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.71 E-value=0.0016 Score=58.99 Aligned_cols=88 Identities=16% Similarity=0.233 Sum_probs=56.5
Q ss_pred CCCCcEEecCCCcc---cccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccc
Q 042362 162 NNKGMVVQGWAPQA---KILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREE 234 (294)
Q Consensus 162 ~~~~v~v~~~~pq~---~lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 234 (294)
...++.+.+++|+. .++..+++ +|.- +..+++.||+++|+|+|+-...+ ....+. ..|..+..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~--~~~~~~~~-- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAG--DAALYFDP-- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceec--CceeeeCC--
Confidence 45688888999876 45666665 4422 23468999999999999855421 111111 23444432
Q ss_pred cCCcccHHHHHHHHHHHHcCCccHHHHHHHHH
Q 042362 235 INQRVRKKDLARVIKQVVEQEEGQQIKRKAKE 266 (294)
Q Consensus 235 ~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~ 266 (294)
-+.+++.++|.+++. ++..+..+.+
T Consensus 321 ----~~~~~~~~~i~~l~~---~~~~~~~~~~ 345 (365)
T cd03809 321 ----LDPEALAAAIERLLE---DPALREELRE 345 (365)
T ss_pred ----CCHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 268999999999987 4554444433
No 75
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.69 E-value=0.014 Score=52.99 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=56.3
Q ss_pred CCCCcEEecCCC-cc---cccCCCCcceEEecC----CchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccc
Q 042362 162 NNKGMVVQGWAP-QA---KILGHGSIGGFVSHC----GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRE 233 (294)
Q Consensus 162 ~~~~v~v~~~~p-q~---~lL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~ 233 (294)
...++...+|++ +. .++..+++ +|... ..++++||+++|+|+|+....+ ....+.+.+.|..+..
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~~~g~~~~~- 314 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHGVTGYLAKP- 314 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCCCceEEeCC-
Confidence 345677889998 33 45776666 77643 3589999999999999875432 2223334457777642
Q ss_pred ccCCcccHHHHHHHHHHHHcC
Q 042362 234 EINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 234 ~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.+.+++.+++.+++++
T Consensus 315 -----~~~~~~~~~l~~l~~~ 330 (365)
T cd03825 315 -----GDPEDLAEGIEWLLAD 330 (365)
T ss_pred -----CCHHHHHHHHHHHHhC
Confidence 3689999999999973
No 76
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.67 E-value=0.004 Score=55.39 Aligned_cols=79 Identities=19% Similarity=0.216 Sum_probs=53.4
Q ss_pred CCCcEEecCCCcc-cccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCC
Q 042362 163 NKGMVVQGWAPQA-KILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQ 237 (294)
Q Consensus 163 ~~~v~v~~~~pq~-~lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~ 237 (294)
..++.+.++.+.. .++..+++ +|.- |..+++.||+++|+|+|+.... .....+.+.+.|..+..
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~~~g~~~~~----- 313 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDGENGLLVPV----- 313 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCCCceEEECC-----
Confidence 4577788887664 56777666 5532 3357899999999999986543 45566777788888853
Q ss_pred cccHHHH---HHHHHHHHc
Q 042362 238 RVRKKDL---ARVIKQVVE 253 (294)
Q Consensus 238 ~~t~~~l---~~ai~~vl~ 253 (294)
-+.+.+ .+++.+++.
T Consensus 314 -~~~~~~~~~~~~i~~~~~ 331 (353)
T cd03811 314 -GDEAALAAAALALLDLLL 331 (353)
T ss_pred -CCHHHHHHHHHHHHhccC
Confidence 256666 444444444
No 77
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.64 E-value=0.0043 Score=57.94 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=58.0
Q ss_pred CCCcEEecCCCccc---ccCCCCcceEEec-CC-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCC
Q 042362 163 NKGMVVQGWAPQAK---ILGHGSIGGFVSH-CG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQ 237 (294)
Q Consensus 163 ~~~v~v~~~~pq~~---lL~~~~v~~~ItH-gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~ 237 (294)
..++.+.+++|+.+ +|..+++-++.+. .| ..+++||+++|+|+|+... ......+.+-..|..++.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~~~G~lv~~----- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDGENGLLVDF----- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccCCceEEcCC-----
Confidence 45788889999764 5666676333333 22 2489999999999998643 234455555567887753
Q ss_pred cccHHHHHHHHHHHHcC
Q 042362 238 RVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++++
T Consensus 351 -~d~~~la~~i~~ll~~ 366 (396)
T cd03818 351 -FDPDALAAAVIELLDD 366 (396)
T ss_pred -CCHHHHHHHHHHHHhC
Confidence 3689999999999973
No 78
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.60 E-value=0.007 Score=56.22 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=63.7
Q ss_pred CCCcEEecCCCcc---cccCCCCcceEE------ecCC-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecc
Q 042362 163 NKGMVVQGWAPQA---KILGHGSIGGFV------SHCG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPR 232 (294)
Q Consensus 163 ~~~v~v~~~~pq~---~lL~~~~v~~~I------tHgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~ 232 (294)
..|+.+.+++|+. ..+.++++.++- +.++ -+.+.|++++|+|+|+.++ ...+...+.+..+.
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~~~~~~~~~- 324 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRYEDEVVLIA- 324 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhhcCcEEEeC-
Confidence 4689999999866 456667763322 1223 2458999999999998763 12222334333332
Q ss_pred cccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHh
Q 042362 233 EEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 288 (294)
Q Consensus 233 ~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~ 288 (294)
-+.+++.++|.+++.++....++. + .+..++.. ...++++.+.|..
T Consensus 325 ------~d~~~~~~ai~~~l~~~~~~~~~~-~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 325 ------DDPEEFVAAIEKALLEDGPARERR-R---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred ------CCHHHHHHHHHHHHhcCCchHHHH-H---HHHHHHCCHHHHHHHHHHHHHh
Confidence 178999999999875422222222 1 11344445 5556666655543
No 79
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.56 E-value=0.00097 Score=58.64 Aligned_cols=146 Identities=14% Similarity=0.190 Sum_probs=99.5
Q ss_pred eEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc-cccCCC
Q 042362 103 VVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA-KILGHG 181 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~-~lL~~~ 181 (294)
-|+|++|..- +.....+++..|.+..+.+-.+++.... -+.....+.. ..+++.+......+ .++..+
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~p--------~l~~l~k~~~-~~~~i~~~~~~~dma~LMke~ 228 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSNP--------TLKNLRKRAE-KYPNINLYIDTNDMAELMKEA 228 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCCc--------chhHHHHHHh-hCCCeeeEecchhHHHHHHhc
Confidence 5888988753 2345667788887777666566653211 1122222221 34556554444433 567666
Q ss_pred CcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHH
Q 042362 182 SIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIK 261 (294)
Q Consensus 182 ~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r 261 (294)
++ .|+-+| .|+.|++..|+|.+++|+.-.|..-|+..+..|+-..+.. .++.+.+..-+.+++. +...|
T Consensus 229 d~--aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~-----~l~~~~~~~~~~~i~~---d~~~r 297 (318)
T COG3980 229 DL--AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGY-----HLKDLAKDYEILQIQK---DYARR 297 (318)
T ss_pred ch--heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccC-----CCchHHHHHHHHHhhh---CHHHh
Confidence 65 898877 5899999999999999999999999999999999888852 2677777888888887 55666
Q ss_pred HHHHHHHHH
Q 042362 262 RKAKELSES 270 (294)
Q Consensus 262 ~~a~~l~~~ 270 (294)
.+.-.-++.
T Consensus 298 k~l~~~~~~ 306 (318)
T COG3980 298 KNLSFGSKL 306 (318)
T ss_pred hhhhhccce
Confidence 655444443
No 80
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.54 E-value=0.0022 Score=52.25 Aligned_cols=80 Identities=23% Similarity=0.294 Sum_probs=58.9
Q ss_pred CCCCcEEecCCCcc---cccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccc
Q 042362 162 NNKGMVVQGWAPQA---KILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREE 234 (294)
Q Consensus 162 ~~~~v~v~~~~pq~---~lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 234 (294)
...++.+.++.++. .++..+++ +|+. +...++.||+++|+|+|+.. ...+...+.+.+.|..+..
T Consensus 71 ~~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~~~g~~~~~-- 142 (172)
T PF00534_consen 71 LKENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDGVNGFLFDP-- 142 (172)
T ss_dssp CGTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTTTSEEEEST--
T ss_pred cccccccccccccccccccccccee--ccccccccccccccccccccccceeecc----ccCCceeeccccceEEeCC--
Confidence 44678888998832 56777666 7766 56789999999999999754 3445566666678999853
Q ss_pred cCCcccHHHHHHHHHHHHc
Q 042362 235 INQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 235 ~~~~~t~~~l~~ai~~vl~ 253 (294)
.+.+++.++|.+++.
T Consensus 143 ----~~~~~l~~~i~~~l~ 157 (172)
T PF00534_consen 143 ----NDIEELADAIEKLLN 157 (172)
T ss_dssp ----TSHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHC
Confidence 289999999999998
No 81
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.52 E-value=0.0044 Score=58.41 Aligned_cols=79 Identities=18% Similarity=0.310 Sum_probs=57.6
Q ss_pred CCCcEEecCCCcc---cccCCCCcceEEec---------CCc-hHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEE
Q 042362 163 NKGMVVQGWAPQA---KILGHGSIGGFVSH---------CGW-GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLE 229 (294)
Q Consensus 163 ~~~v~v~~~~pq~---~lL~~~~v~~~ItH---------gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~ 229 (294)
..++.+.+|+|+. .++..+++ ||.- -|. ++++||+++|+|+|+-...+ ....+.+-..|..
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~~~G~l 351 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEADKSGWL 351 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCCCceEE
Confidence 4678899999986 45666666 6642 233 67899999999999975432 3344555567888
Q ss_pred ecccccCCcccHHHHHHHHHHHHc
Q 042362 230 VPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 230 l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
++. -+.+++.++|.++++
T Consensus 352 v~~------~d~~~la~ai~~l~~ 369 (406)
T PRK15427 352 VPE------NDAQALAQRLAAFSQ 369 (406)
T ss_pred eCC------CCHHHHHHHHHHHHh
Confidence 753 368999999999997
No 82
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.51 E-value=0.015 Score=54.27 Aligned_cols=79 Identities=23% Similarity=0.325 Sum_probs=56.2
Q ss_pred CCCCcEEecCCCcc-cccCCCCcceEE--ec--CCc-hHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccccc
Q 042362 162 NNKGMVVQGWAPQA-KILGHGSIGGFV--SH--CGW-GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEI 235 (294)
Q Consensus 162 ~~~~v~v~~~~pq~-~lL~~~~v~~~I--tH--gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~ 235 (294)
...++.+.+++++. .++..+++ +| ++ .|. +.++||+++|+|+|+-+...+.. ....|.|+.+.
T Consensus 278 ~~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv~---- 346 (397)
T TIGR03087 278 ALPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLVA---- 346 (397)
T ss_pred cCCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEeC----
Confidence 34678889999865 56777676 55 32 343 46999999999999987543221 12346777763
Q ss_pred CCcccHHHHHHHHHHHHcC
Q 042362 236 NQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 236 ~~~~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++++
T Consensus 347 ---~~~~~la~ai~~ll~~ 362 (397)
T TIGR03087 347 ---ADPADFAAAILALLAN 362 (397)
T ss_pred ---CCHHHHHHHHHHHHcC
Confidence 2789999999999973
No 83
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.48 E-value=0.03 Score=50.14 Aligned_cols=77 Identities=23% Similarity=0.357 Sum_probs=51.9
Q ss_pred CCcEEecCCCcc-cccCCCCcceEEecCC----chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCc
Q 042362 164 KGMVVQGWAPQA-KILGHGSIGGFVSHCG----WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQR 238 (294)
Q Consensus 164 ~~v~v~~~~pq~-~lL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~ 238 (294)
.++.+.+...+. .++..+++ +|.... .+++.||+++|+|+|+.... .+...+.+ .|..+..
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~--~g~~~~~------ 316 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDVG----DNAELVGD--TGFLVPP------ 316 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCCC----ChHHHhhc--CCEEeCC------
Confidence 455555544433 56766665 776544 48999999999999985443 34444444 5666642
Q ss_pred ccHHHHHHHHHHHHcC
Q 042362 239 VRKKDLARVIKQVVEQ 254 (294)
Q Consensus 239 ~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++++
T Consensus 317 ~~~~~l~~~i~~l~~~ 332 (365)
T cd03807 317 GDPEALAEAIEALLAD 332 (365)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 2689999999999974
No 84
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.47 E-value=0.035 Score=50.28 Aligned_cols=137 Identities=20% Similarity=0.128 Sum_probs=76.4
Q ss_pred CceEEEEeCCCccC-CHHHHHHHHHHHhcC--CCcEEEEEeecCCCccchhccCChhhHHhhh--cCCCCcEEecCCCcc
Q 042362 101 SSVVYVSFGSEYFL-SQEEMNEIASGLLLS--EVSFIWVVRFHSEGKFTIEEALPQSFSKEIQ--GNNKGMVVQGWAPQA 175 (294)
Q Consensus 101 ~~vVyvs~GS~~~~-~~~~~~~l~~al~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~v~v~~~~pq~ 175 (294)
...+++..|..... ..+.+.+++..+... +..++++ +... .... +.+.+.+.+. +...++.+.+|.+..
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~iv-G~~~-~~~~----~~~~~~~~~~~~~~~~~v~~~g~~~~~ 257 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIV-GDAQ-GRRF----YYAELLELIKRLGLQDRVTFVGHCSDM 257 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEE-ECCc-ccch----HHHHHHHHHHHcCCcceEEEcCCcccH
Confidence 34667777876542 234455555555543 3444333 3211 1111 1111111111 124578888885443
Q ss_pred -cccCCCCcceEEec--C-CchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 176 -KILGHGSIGGFVSH--C-GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 176 -~lL~~~~v~~~ItH--g-G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
.+|..+++-++-++ - ..++++||+++|+|+|+.... .....+.+.+.|..+.. -+.+++.++|..+
T Consensus 258 ~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~~~~g~~~~~------~~~~~l~~~i~~~ 327 (355)
T cd03819 258 PAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRPGETGLLVPP------GDAEALAQALDQI 327 (355)
T ss_pred HHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhCCCceEEeCC------CCHHHHHHHHHHH
Confidence 56777777333231 1 246999999999999986543 23445555567888753 3789999999766
Q ss_pred Hc
Q 042362 252 VE 253 (294)
Q Consensus 252 l~ 253 (294)
+.
T Consensus 328 ~~ 329 (355)
T cd03819 328 LS 329 (355)
T ss_pred Hh
Confidence 54
No 85
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.46 E-value=0.004 Score=56.93 Aligned_cols=80 Identities=23% Similarity=0.249 Sum_probs=59.9
Q ss_pred CCCcEEecCCCcc---cccCCCCcceEEec----------CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEE
Q 042362 163 NKGMVVQGWAPQA---KILGHGSIGGFVSH----------CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLE 229 (294)
Q Consensus 163 ~~~v~v~~~~pq~---~lL~~~~v~~~ItH----------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~ 229 (294)
..++.+.+++|+. .++..+++ +|.. |-.+++.||+++|+|+|+-+..+ ++..+.+.+.|..
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~~~g~~ 317 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDGETGLL 317 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecCCeeEE
Confidence 4678888999875 45777666 5532 23578999999999999876643 5566666788888
Q ss_pred ecccccCCcccHHHHHHHHHHHHcC
Q 042362 230 VPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 230 l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
+.. -+.+++.++|.+++++
T Consensus 318 ~~~------~d~~~l~~~i~~l~~~ 336 (367)
T cd05844 318 VPE------GDVAALAAALGRLLAD 336 (367)
T ss_pred ECC------CCHHHHHHHHHHHHcC
Confidence 853 3679999999999983
No 86
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.43 E-value=0.028 Score=51.73 Aligned_cols=79 Identities=23% Similarity=0.247 Sum_probs=54.4
Q ss_pred CCcEEecCCCcc-cccCCCCcceEE--ec--CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCc
Q 042362 164 KGMVVQGWAPQA-KILGHGSIGGFV--SH--CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQR 238 (294)
Q Consensus 164 ~~v~v~~~~pq~-~lL~~~~v~~~I--tH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~ 238 (294)
.++.+.++..+. .++..+++ +| ++ |-..+++||+++|+|+|+-...+ +...+.+-..|..+..
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~~~g~~~~~------ 322 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHGVTGALVPP------ 322 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCCCceEEeCC------
Confidence 345555554433 66777776 55 33 34578999999999999966532 4445555567887753
Q ss_pred ccHHHHHHHHHHHHcC
Q 042362 239 VRKKDLARVIKQVVEQ 254 (294)
Q Consensus 239 ~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++++
T Consensus 323 ~d~~~la~~i~~l~~~ 338 (374)
T TIGR03088 323 GDAVALARALQPYVSD 338 (374)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 3689999999999973
No 87
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.42 E-value=0.0024 Score=58.93 Aligned_cols=132 Identities=17% Similarity=0.237 Sum_probs=77.1
Q ss_pred ceEEEEeCCCccCCHHHHHHHHHHHhcC--CCcEEEEEeecCCCccchhccCChhhHHhhh--cCCCCcEEecCCCcc--
Q 042362 102 SVVYVSFGSEYFLSQEEMNEIASGLLLS--EVSFIWVVRFHSEGKFTIEEALPQSFSKEIQ--GNNKGMVVQGWAPQA-- 175 (294)
Q Consensus 102 ~vVyvs~GS~~~~~~~~~~~l~~al~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~v~v~~~~pq~-- 175 (294)
+.+++..|.........+..+++++... +.++++ ++. +... +.+.+.+. +...++.+.+|+++.
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~i-vG~--g~~~-------~~l~~~~~~~~l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHI-IGD--GSDF-------EKCKAYSRELGIEQRIIWHGWQSQPWE 249 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEE-EeC--CccH-------HHHHHHHHHcCCCCeEEEecccCCcHH
Confidence 3566777776432234455666666553 334443 332 1110 11211111 135678888988542
Q ss_pred ---cccCCCCcceEEec----CCchHHHHHHHhCCcEEeec-cccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHH
Q 042362 176 ---KILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVP-MVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARV 247 (294)
Q Consensus 176 ---~lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~a 247 (294)
..+..+++ +|.. |-..+++||+++|+|+|+.- ..+ ....+.+...|..+.. -+.+++.++
T Consensus 250 ~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~~~G~lv~~------~d~~~la~~ 317 (359)
T PRK09922 250 VVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPGLNGELYTP------GNIDEFVGK 317 (359)
T ss_pred HHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCCCceEEECC------CCHHHHHHH
Confidence 23334444 5543 33589999999999999875 322 2234455567888753 378999999
Q ss_pred HHHHHcCC
Q 042362 248 IKQVVEQE 255 (294)
Q Consensus 248 i~~vl~~~ 255 (294)
|.++++++
T Consensus 318 i~~l~~~~ 325 (359)
T PRK09922 318 LNKVISGE 325 (359)
T ss_pred HHHHHhCc
Confidence 99999854
No 88
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.41 E-value=0.005 Score=57.25 Aligned_cols=197 Identities=16% Similarity=0.187 Sum_probs=105.4
Q ss_pred HHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeC-CCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCC
Q 042362 37 KAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVG-PLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLS 115 (294)
Q Consensus 37 ~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VG-pl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~ 115 (294)
..+.+.+|.+++ ...||.++++. .+-++.||| |+..... . ........+.+ -.+++++|.+--||....-
T Consensus 128 ~~i~~~~D~ll~--ifPFE~~~y~~----~g~~~~~VGHPl~d~~~-~-~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI 198 (373)
T PF02684_consen 128 KKIKKYVDHLLV--IFPFEPEFYKK----HGVPVTYVGHPLLDEVK-P-EPDRAEAREKL-LDPDKPIIALLPGSRKSEI 198 (373)
T ss_pred HHHHHHHhheeE--CCcccHHHHhc----cCCCeEEECCcchhhhc-c-CCCHHHHHHhc-CCCCCcEEEEeCCCCHHHH
Confidence 344443566544 55677776532 335799999 8766532 1 11223333333 2345669999999976422
Q ss_pred HHHHHHHHHHH---hc--CCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecC-CCcccccCCCCcceEEec
Q 042362 116 QEEMNEIASGL---LL--SEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGW-APQAKILGHGSIGGFVSH 189 (294)
Q Consensus 116 ~~~~~~l~~al---~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~-~pq~~lL~~~~v~~~ItH 189 (294)
...+..++++. .+ .+.+|++...... ..+.+.+.......++.+... -.-.+++..+++ .+.-
T Consensus 199 ~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~ 267 (373)
T PF02684_consen 199 KRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV---------HEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAA 267 (373)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEecCCHH---------HHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhc
Confidence 33333444443 22 3556666542210 001111111112222322211 123467777665 6666
Q ss_pred CCchHHHHHHHhCCcEEeec-cccchHhHHHHHHHhC-cEE-------EecccccCCcccHHHHHHHHHHHHcC
Q 042362 190 CGWGSTVEGIMYGVPIIAVP-MVLDQLFNAKMVADIG-VGL-------EVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 190 gG~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~v~~~G-~G~-------~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.| +.++|+...|+|||++= ...=.+.-|+++.+.. +|+ .+-+.=..+..|++.|.+++.+++.+
T Consensus 268 SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 268 SG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLEN 340 (373)
T ss_pred CC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC
Confidence 66 56889999999999863 3333456677776542 111 11100014678999999999999984
No 89
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.40 E-value=0.015 Score=52.81 Aligned_cols=77 Identities=18% Similarity=0.327 Sum_probs=49.0
Q ss_pred CCCCcEEecCCCccc---ccCCCCcceEEecCCc-----hHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccc
Q 042362 162 NNKGMVVQGWAPQAK---ILGHGSIGGFVSHCGW-----GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRE 233 (294)
Q Consensus 162 ~~~~v~v~~~~pq~~---lL~~~~v~~~ItHgG~-----~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~ 233 (294)
...++.+.+++|+.+ .+..+++ ++.+.-. ++++||+++|+|+|+...... ...+.. .|..+..
T Consensus 246 ~~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~--~g~~~~~- 316 (363)
T cd04955 246 ADPRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD--KAIYFKV- 316 (363)
T ss_pred CCCcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC--CeeEecC-
Confidence 456898999998874 4544554 5554433 579999999999998754321 111222 3444431
Q ss_pred ccCCcccHHHHHHHHHHHHcC
Q 042362 234 EINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 234 ~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.+.+.++|.+++++
T Consensus 317 -------~~~l~~~i~~l~~~ 330 (363)
T cd04955 317 -------GDDLASLLEELEAD 330 (363)
T ss_pred -------chHHHHHHHHHHhC
Confidence 12299999999973
No 90
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.39 E-value=0.0043 Score=56.28 Aligned_cols=88 Identities=17% Similarity=0.210 Sum_probs=57.2
Q ss_pred CCCcEEecCCCcc-cccCCCCcceEEecCC----chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCC
Q 042362 163 NKGMVVQGWAPQA-KILGHGSIGGFVSHCG----WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQ 237 (294)
Q Consensus 163 ~~~v~v~~~~pq~-~lL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~ 237 (294)
..++.+.++..+. .++..+++ +|.-.. .++++||+++|+|+|+... ..+...+.+ .|..+..
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~--~g~~~~~----- 310 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVVGD--SGLIVPI----- 310 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEecC----CChhhEecC--CceEeCC-----
Confidence 4578777876553 67777666 555332 5789999999999998543 334444544 3444432
Q ss_pred cccHHHHHHHHHHHHcCCccHHHHHHHHH
Q 042362 238 RVRKKDLARVIKQVVEQEEGQQIKRKAKE 266 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~~~~~~~~r~~a~~ 266 (294)
-+.+++.++|.+++++ ++.+++...+
T Consensus 311 -~~~~~~~~~i~~ll~~--~~~~~~~~~~ 336 (360)
T cd04951 311 -SDPEALANKIDEILKM--SGEERDIIGA 336 (360)
T ss_pred -CCHHHHHHHHHHHHhC--CHHHHHHHHH
Confidence 3788999999999843 3444444443
No 91
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.35 E-value=0.01 Score=57.60 Aligned_cols=101 Identities=14% Similarity=0.195 Sum_probs=63.0
Q ss_pred CCCcEEecCCCcccccCCCCcceEEec---CC-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccc-cCC
Q 042362 163 NKGMVVQGWAPQAKILGHGSIGGFVSH---CG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREE-INQ 237 (294)
Q Consensus 163 ~~~v~v~~~~pq~~lL~~~~v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~-~~~ 237 (294)
..++...++.+...++..+++ ||.- =| ..+++||+++|+|+|+....+ .+...+++-..|..++.+. ...
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCCCCEEEEeCCccccc
Confidence 456777788776788887776 6542 22 478999999999999975421 1344455556788875210 000
Q ss_pred ccc-HHHHHHHHHHHHcCCccHHHHHHHHHHH
Q 042362 238 RVR-KKDLARVIKQVVEQEEGQQIKRKAKELS 268 (294)
Q Consensus 238 ~~t-~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 268 (294)
.-+ .++++++|.++++++.-..+.+++++.+
T Consensus 450 ~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a 481 (500)
T TIGR02918 450 EDQIITALAEKIVEYFNSNDIDAFHEYSYQIA 481 (500)
T ss_pred hhHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 112 7889999999995322234555555543
No 92
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.33 E-value=0.0014 Score=60.06 Aligned_cols=109 Identities=17% Similarity=0.314 Sum_probs=76.8
Q ss_pred CCCCcEEecCCCcccc---cCCCCcceEEecC-------C------chHHHHHHHhCCcEEeeccccchHhHHHHHHHhC
Q 042362 162 NNKGMVVQGWAPQAKI---LGHGSIGGFVSHC-------G------WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIG 225 (294)
Q Consensus 162 ~~~~v~v~~~~pq~~l---L~~~~v~~~ItHg-------G------~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G 225 (294)
...|+...+|+|+.++ |.. +.+++...- . -+-+.+++++|+|+|+++ +...+..+++.+
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~~ 279 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVENG 279 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhCC
Confidence 4457888899998754 333 333332211 1 123778899999999864 456778888999
Q ss_pred cEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC--cHHHHHHHH
Q 042362 226 VGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG--DDEEINVVE 284 (294)
Q Consensus 226 ~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~--~~~~~~~v~ 284 (294)
+|+.++ +.+++.+++.++. +++-..|++|++++++.++.+- ..++.+++.
T Consensus 280 ~G~~v~--------~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVVD--------SLEELPEIIDNIT-EEEYQEMVENVKKISKLLRNGYFTKKALVDAIK 331 (333)
T ss_pred ceEEeC--------CHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHh
Confidence 999994 5678999998854 3334678999999999999877 555555543
No 93
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.29 E-value=0.0025 Score=60.15 Aligned_cols=77 Identities=21% Similarity=0.271 Sum_probs=54.6
Q ss_pred CCcEE-ecCCCcc---cccCCCCcceEEe-c------CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecc
Q 042362 164 KGMVV-QGWAPQA---KILGHGSIGGFVS-H------CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPR 232 (294)
Q Consensus 164 ~~v~v-~~~~pq~---~lL~~~~v~~~It-H------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~ 232 (294)
.+++. .+|+|.. .+|+.+++ ++. + |--++++||+++|+|+|+.... .....+++.+.|..+.
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~~~G~lv~- 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHGENGLVFG- 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCCCCEEEEC-
Confidence 34544 3688765 45777776 553 1 1245799999999999986542 4555666667898873
Q ss_pred cccCCcccHHHHHHHHHHHHcC
Q 042362 233 EEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 233 ~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
+.++++++|.+++++
T Consensus 367 -------d~~~la~~i~~ll~~ 381 (415)
T cd03816 367 -------DSEELAEQLIDLLSN 381 (415)
T ss_pred -------CHHHHHHHHHHHHhc
Confidence 689999999999984
No 94
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.22 E-value=0.016 Score=56.78 Aligned_cols=214 Identities=14% Similarity=0.149 Sum_probs=112.5
Q ss_pred HHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeC-CCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCC
Q 042362 37 KAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVG-PLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLS 115 (294)
Q Consensus 37 ~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VG-pl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~ 115 (294)
..+.+.+|.+++ ...||.++++. .+-++.+|| |+..... ......+..+-+.-.+++++|-+--||....-
T Consensus 356 kki~k~vD~ll~--IfPFE~~~y~~----~gv~v~yVGHPL~d~i~--~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI 427 (608)
T PRK01021 356 TILEKYLDLLLL--ILPFEQNLFKD----SPLRTVYLGHPLVETIS--SFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDI 427 (608)
T ss_pred HHHHHHhhhhee--cCccCHHHHHh----cCCCeEEECCcHHhhcc--cCCCHHHHHHHcCCCCCCCEEEEECCCCHHHH
Confidence 344443565554 45677776542 456799999 7765521 11122333333444445679999999976533
Q ss_pred HHHHHHHHHHHh--c--CCCcEEEEEeecCCCccchhccCChhhHHhhhcCC-CCcEEecCCCcccccCCCCcceEEecC
Q 042362 116 QEEMNEIASGLL--L--SEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNN-KGMVVQGWAPQAKILGHGSIGGFVSHC 190 (294)
Q Consensus 116 ~~~~~~l~~al~--~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~-~~v~v~~~~pq~~lL~~~~v~~~ItHg 190 (294)
...+..++++.+ . .+.+|+....... ..+.+.+.+.+.+ ..+.+..--...+++..+++ .+.-+
T Consensus 428 ~rllPv~l~aa~~~~l~~~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaS 496 (608)
T PRK01021 428 LRNLTIQVQAFLASSLASTHQLLVSSANPK---------YDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKC 496 (608)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEecCchh---------hHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecC
Confidence 344444555554 2 2456655422110 0011111120011 01122110001366776665 88877
Q ss_pred CchHHHHHHHhCCcEEeec-cccchHhHHHHHHHh-----C-----cEEEecccccC---CcccHHHHHHHHHHHHcCC-
Q 042362 191 GWGSTVEGIMYGVPIIAVP-MVLDQLFNAKMVADI-----G-----VGLEVPREEIN---QRVRKKDLARVIKQVVEQE- 255 (294)
Q Consensus 191 G~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~v~~~-----G-----~G~~l~~~~~~---~~~t~~~l~~ai~~vl~~~- 255 (294)
|. .++|+...|+|||++= ...=-+.-++++.+. + +|..+-+ |.. +..|++.|.+++ ++|.++
T Consensus 497 GT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvP-EllqgQ~~~tpe~La~~l-~lL~d~~ 573 (608)
T PRK01021 497 GT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFP-EFIGGKKDFQPEEVAAAL-DILKTSQ 573 (608)
T ss_pred CH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcch-hhcCCcccCCHHHHHHHH-HHhcCHH
Confidence 75 5789999999999963 222234456666651 1 1222211 112 468999999997 777642
Q ss_pred ccHHHHHHHHHHHHHHH
Q 042362 256 EGQQIKRKAKELSESIK 272 (294)
Q Consensus 256 ~~~~~r~~a~~l~~~~~ 272 (294)
..+++++..+++++.+.
T Consensus 574 ~r~~~~~~l~~lr~~Lg 590 (608)
T PRK01021 574 SKEKQKDACRDLYQAMN 590 (608)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 12456666666666664
No 95
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.08 E-value=0.00081 Score=62.06 Aligned_cols=186 Identities=13% Similarity=0.142 Sum_probs=97.3
Q ss_pred HhhccccEEEEcCchhhcHHHHHHHhhh-c-CCCeEeeCCCCCCCCCCC-CCCchhH--HHhhccCCCCceEEEEeCCCc
Q 042362 38 AIDLSCKLVLIKTSRDIESKYLDYFSYI-T-KKETIPVGPLVQEPVYTD-NNDDTKI--MDWLSRKEPSSVVYVSFGSEY 112 (294)
Q Consensus 38 ~~~~~~~~~lint~~ele~~~~~~~~~~-~-~~~~~~VGpl~~~~~~~~-~~~~~~~--~~wl~~~~~~~vVyvs~GS~~ 112 (294)
...+-+++.++.| ..+.+.+... . +.+++.||...-+.-... ....... ..++.. .+++.++|++=...
T Consensus 118 ~i~~la~lhf~~t-----~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~-~~~~~iLvt~H~~t 191 (346)
T PF02350_consen 118 AIDKLAHLHFAPT-----EEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQD-APKPYILVTLHPVT 191 (346)
T ss_dssp HHHHH-SEEEESS-----HHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHC-TTSEEEEEE-S-CC
T ss_pred hhhhhhhhhccCC-----HHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhc-cCCCEEEEEeCcch
Confidence 3444468889988 3333333222 2 468999997643200000 0011111 122222 45679999995555
Q ss_pred cCC-H---HHHHHHHHHHhcC-CCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc---cccCCCCcc
Q 042362 113 FLS-Q---EEMNEIASGLLLS-EVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---KILGHGSIG 184 (294)
Q Consensus 113 ~~~-~---~~~~~l~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~lL~~~~v~ 184 (294)
... . .++.+++++|.+. ++++||.+..... ....+.+++.+. +++.+..-+++. .+|.++++
T Consensus 192 ~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~--------~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~- 261 (346)
T PF02350_consen 192 NEDNPERLEQILEALKALAERQNVPVIFPLHNNPR--------GSDIIIEKLKKY-DNVRLIEPLGYEEYLSLLKNADL- 261 (346)
T ss_dssp CCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH--------HHHHHHHHHTT--TTEEEE----HHHHHHHHHHESE-
T ss_pred hcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch--------HHHHHHHHhccc-CCEEEECCCCHHHHHHHHhcceE-
Confidence 444 3 4556666777665 7889998752210 011222333223 488877766654 67778666
Q ss_pred eEEecCCchHHH-HHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 185 GFVSHCGWGSTV-EGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 185 ~~ItHgG~~s~~-Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
+||-.| +++ ||.+.|+|.|.+=-..+. ......|..+.+. .+.++|.+++.+++.
T Consensus 262 -vvgdSs--GI~eEa~~lg~P~v~iR~~geR----qe~r~~~~nvlv~-------~~~~~I~~ai~~~l~ 317 (346)
T PF02350_consen 262 -VVGDSS--GIQEEAPSLGKPVVNIRDSGER----QEGRERGSNVLVG-------TDPEAIIQAIEKALS 317 (346)
T ss_dssp -EEESSH--HHHHHGGGGT--EEECSSS-S-----HHHHHTTSEEEET-------SSHHHHHHHHHHHHH
T ss_pred -EEEcCc--cHHHHHHHhCCeEEEecCCCCC----HHHHhhcceEEeC-------CCHHHHHHHHHHHHh
Confidence 999998 566 999999999998211211 1123446676653 479999999999997
No 96
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.02 E-value=0.083 Score=47.86 Aligned_cols=79 Identities=14% Similarity=0.074 Sum_probs=54.2
Q ss_pred CCCcEEecCCCcc-cccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCC
Q 042362 163 NKGMVVQGWAPQA-KILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQ 237 (294)
Q Consensus 163 ~~~v~v~~~~pq~-~lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~ 237 (294)
..++.+.++..+. .++..+++ +|.- |-.++++||+++|+|+|+-...+ ....+.+ +.|..+..
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~-~~~~~~~~----- 315 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD-LVKFLSLD----- 315 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc-CccEEeCC-----
Confidence 4577777874443 67776666 5543 44688999999999999865533 2333444 55655532
Q ss_pred cccHHHHHHHHHHHHcC
Q 042362 238 RVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~~ 254 (294)
-+.++++++|.+++++
T Consensus 316 -~~~~~~a~~i~~l~~~ 331 (358)
T cd03812 316 -ESPEIWAEEILKLKSE 331 (358)
T ss_pred -CCHHHHHHHHHHHHhC
Confidence 2579999999999984
No 97
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.01 E-value=0.083 Score=48.80 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=56.9
Q ss_pred CCCCcEEecCCCcc---cccCCCCcceEEecC----CchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccc
Q 042362 162 NNKGMVVQGWAPQA---KILGHGSIGGFVSHC----GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREE 234 (294)
Q Consensus 162 ~~~~v~v~~~~pq~---~lL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 234 (294)
...++.+.+++|+. .+|..+++ ++... -..+++||+++|+|+|+.-..+ ....+.+.+.|..+..
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~~~g~~~~~-- 349 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDGETGFLCEP-- 349 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccCCceEEeCC--
Confidence 35688999999886 45676666 55321 1367899999999999964432 3344555567877742
Q ss_pred cCCcccHHHHHHHHHHHHcC
Q 042362 235 INQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 235 ~~~~~t~~~l~~ai~~vl~~ 254 (294)
+.+++.++|.+++++
T Consensus 350 -----~~~~~a~~i~~l~~~ 364 (392)
T cd03805 350 -----TPEEFAEAMLKLAND 364 (392)
T ss_pred -----CHHHHHHHHHHHHhC
Confidence 689999999999974
No 98
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.97 E-value=0.0064 Score=58.90 Aligned_cols=126 Identities=17% Similarity=0.321 Sum_probs=82.8
Q ss_pred CceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc-----
Q 042362 101 SSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA----- 175 (294)
Q Consensus 101 ~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~----- 175 (294)
..|||.+|--....+++.++..++-|.+.+-.++|..+.+...+..... ..+...-.++.+.+.+-++..
T Consensus 758 d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~t-----y~~~~Gl~p~riifs~va~k~eHvrr 832 (966)
T KOG4626|consen 758 DAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRT-----YAEQLGLEPDRIIFSPVAAKEEHVRR 832 (966)
T ss_pred CeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHH-----HHHHhCCCccceeeccccchHHHHHh
Confidence 4499999999999999999999999999999999999876432211100 000000023445444333322
Q ss_pred cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHh-HHHHHHHhCcEEEecc
Q 042362 176 KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLF-NAKMVADIGVGLEVPR 232 (294)
Q Consensus 176 ~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~-na~~v~~~G~G~~l~~ 232 (294)
..|..-.++-+.+. |+.|.++.++.|+|||.+|.-.--.. -+-.+...|+|..+-+
T Consensus 833 ~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak 889 (966)
T KOG4626|consen 833 GQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK 889 (966)
T ss_pred hhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh
Confidence 33444455557776 67899999999999999997443222 3445566799987754
No 99
>PLN02949 transferase, transferring glycosyl groups
Probab=96.91 E-value=0.052 Score=52.13 Aligned_cols=110 Identities=15% Similarity=0.084 Sum_probs=62.8
Q ss_pred CCCcEEecCCCcc---cccCCCCcceEEe---cCC-chHHHHHHHhCCcEEeeccccchHhHHHHHHH--hC-cEEEecc
Q 042362 163 NKGMVVQGWAPQA---KILGHGSIGGFVS---HCG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD--IG-VGLEVPR 232 (294)
Q Consensus 163 ~~~v~v~~~~pq~---~lL~~~~v~~~It---HgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~--~G-~G~~l~~ 232 (294)
..++.+.+++|+. .+|..+++ +|. +=| ..++.||+++|+|.|+....+- ....+.+ .| .|....
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp---~~eIV~~~~~g~tG~l~~- 407 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGP---KMDIVLDEDGQQTGFLAT- 407 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCC---cceeeecCCCCcccccCC-
Confidence 5678888999866 45666665 552 122 2479999999999999765320 0000111 02 344331
Q ss_pred cccCCcccHHHHHHHHHHHHcCCc--cHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHh
Q 042362 233 EEINQRVRKKDLARVIKQVVEQEE--GQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 288 (294)
Q Consensus 233 ~~~~~~~t~~~l~~ai~~vl~~~~--~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~ 288 (294)
+.++++++|.+++++++ ..++.+++++..+. -. ..-.+++.+.+.+
T Consensus 408 -------~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~---FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 408 -------TVEEYADAILEVLRMRETERLEIAAAARKRANR---FSEQRFNEDFKDAIRP 456 (463)
T ss_pred -------CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHH
Confidence 68999999999997321 12455555543322 22 3334444444443
No 100
>PHA01633 putative glycosyl transferase group 1
Probab=96.89 E-value=0.27 Score=45.17 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=52.8
Q ss_pred CCCcEEe---cCCCcc---cccCCCCcceEEecC---C-chHHHHHHHhCCcEEeecc------ccch------HhHHHH
Q 042362 163 NKGMVVQ---GWAPQA---KILGHGSIGGFVSHC---G-WGSTVEGIMYGVPIIAVPM------VLDQ------LFNAKM 220 (294)
Q Consensus 163 ~~~v~v~---~~~pq~---~lL~~~~v~~~ItHg---G-~~s~~Eal~~GvP~i~~P~------~~DQ------~~na~~ 220 (294)
..++.+. +++++. .++..+++ |+.-. | ..+++||+++|+|+|+--. .+|+ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 4467666 444543 45666665 77532 3 4678999999999998522 2332 223333
Q ss_pred HH--HhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 221 VA--DIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 221 v~--~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
.. ..|.|..++ ..++++++++|.+++.
T Consensus 278 ~~~~~~g~g~~~~------~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 278 YYDKEHGQKWKIH------KFQIEDMANAIILAFE 306 (335)
T ss_pred hcCcccCceeeec------CCCHHHHHHHHHHHHh
Confidence 33 247777764 4689999999999865
No 101
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=96.88 E-value=0.028 Score=53.17 Aligned_cols=78 Identities=19% Similarity=0.135 Sum_probs=53.5
Q ss_pred CCCcEEecCCCcc---cccCCCCcceEEe-----cCCchHHHHHHHhCCcEEeeccccchHhHHHHHH---HhCcEEEec
Q 042362 163 NKGMVVQGWAPQA---KILGHGSIGGFVS-----HCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVA---DIGVGLEVP 231 (294)
Q Consensus 163 ~~~v~v~~~~pq~---~lL~~~~v~~~It-----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~---~~G~G~~l~ 231 (294)
..++.+.+++|+. .+|..+++ +|+ |-| .++.||+++|+|.|+.-..+. ....+. +-..|....
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g~~G~l~~ 377 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGGPTGFLAS 377 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCC---chheeeccCCCCceEEeC
Confidence 4678888999876 56766666 553 333 578999999999998654321 111122 345777652
Q ss_pred ccccCCcccHHHHHHHHHHHHcC
Q 042362 232 REEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 232 ~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
+.+++.++|.+++++
T Consensus 378 --------d~~~la~ai~~ll~~ 392 (419)
T cd03806 378 --------TAEEYAEAIEKILSL 392 (419)
T ss_pred --------CHHHHHHHHHHHHhC
Confidence 689999999999974
No 102
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=96.81 E-value=0.18 Score=47.95 Aligned_cols=82 Identities=17% Similarity=0.170 Sum_probs=56.5
Q ss_pred CCCcEEecCCCcccc---cCCC--CcceEEecC---C-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccc
Q 042362 163 NKGMVVQGWAPQAKI---LGHG--SIGGFVSHC---G-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRE 233 (294)
Q Consensus 163 ~~~v~v~~~~pq~~l---L~~~--~v~~~ItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~ 233 (294)
..++.+.+++++.++ +..+ +.++||... | ..+++||+++|+|+|+-...+ ....+.+...|+.++.
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~~~G~lv~~- 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANCRNGLLVDV- 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCCCcEEEeCC-
Confidence 455777787776543 4433 234577643 2 468999999999999876532 4444545567888753
Q ss_pred ccCCcccHHHHHHHHHHHHcC
Q 042362 234 EINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 234 ~~~~~~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++++
T Consensus 391 -----~d~~~la~~i~~ll~~ 406 (439)
T TIGR02472 391 -----LDLEAIASALEDALSD 406 (439)
T ss_pred -----CCHHHHHHHHHHHHhC
Confidence 3689999999999973
No 103
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.77 E-value=0.0045 Score=48.32 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=48.7
Q ss_pred CCCcEEecCCCcc-cccCCCCcceEEec---CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCc
Q 042362 163 NKGMVVQGWAPQA-KILGHGSIGGFVSH---CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQR 238 (294)
Q Consensus 163 ~~~v~v~~~~pq~-~lL~~~~v~~~ItH---gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~ 238 (294)
..++.+.+|++.. .++..+++.+..+. +-.+++.|++++|+|+|+.+.. ....++..+.|..+.
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~~~~~~~~------- 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEEDGCGVLVA------- 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS---SEEEE-T-------
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeecCCeEEEC-------
Confidence 3488889998643 56777777655543 2248999999999999998761 222333467887773
Q ss_pred ccHHHHHHHHHHHHc
Q 042362 239 VRKKDLARVIKQVVE 253 (294)
Q Consensus 239 ~t~~~l~~ai~~vl~ 253 (294)
-+.+++.++|.++++
T Consensus 120 ~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 120 NDPEELAEAIERLLN 134 (135)
T ss_dssp T-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhc
Confidence 279999999999885
No 104
>PLN02275 transferase, transferring glycosyl groups
Probab=96.70 E-value=0.081 Score=49.08 Aligned_cols=75 Identities=23% Similarity=0.324 Sum_probs=51.9
Q ss_pred CCcEEe-cCCCccc---ccCCCCcceEEe-c-----CC-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecc
Q 042362 164 KGMVVQ-GWAPQAK---ILGHGSIGGFVS-H-----CG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPR 232 (294)
Q Consensus 164 ~~v~v~-~~~pq~~---lL~~~~v~~~It-H-----gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~ 232 (294)
.++.+. +|+|+.+ +|+.+++ |+. + -| -++++||+++|+|+|+.... .+...+.+-+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~g~~G~lv~- 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKDGKNGLLFS- 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccCCCCeEEEC-
Confidence 445554 4788764 4777676 663 1 11 35799999999999997532 2556666667899884
Q ss_pred cccCCcccHHHHHHHHHHHH
Q 042362 233 EEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 233 ~~~~~~~t~~~l~~ai~~vl 252 (294)
+.+++.++|.+++
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 4788998888764
No 105
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.67 E-value=0.081 Score=49.44 Aligned_cols=78 Identities=14% Similarity=0.247 Sum_probs=52.5
Q ss_pred CCCcEEecCCCcc---cccCCCCcceEEecC---Cc-hHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccccc
Q 042362 163 NKGMVVQGWAPQA---KILGHGSIGGFVSHC---GW-GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEI 235 (294)
Q Consensus 163 ~~~v~v~~~~pq~---~lL~~~~v~~~ItHg---G~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~ 235 (294)
..++.+.+|+|+. .++..+++ +|.-. |. .+++||+++|+|+|+-+..+ ....+. .|.+....
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~-~~~~~~~~---- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLP-PDMILLAE---- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhee-CCceeecC----
Confidence 4568888999865 46666666 65422 33 49999999999999976643 122332 34343332
Q ss_pred CCcccHHHHHHHHHHHHcC
Q 042362 236 NQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 236 ~~~~t~~~l~~ai~~vl~~ 254 (294)
.+.+++.++|.+++.+
T Consensus 318 ---~~~~~l~~~l~~~l~~ 333 (398)
T cd03796 318 ---PDVESIVRKLEEAISI 333 (398)
T ss_pred ---CCHHHHHHHHHHHHhC
Confidence 2679999999999874
No 106
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.58 E-value=0.1 Score=50.16 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=54.1
Q ss_pred CCCcEEecCCCcccccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHh------CcEEEecc
Q 042362 163 NKGMVVQGWAPQAKILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI------GVGLEVPR 232 (294)
Q Consensus 163 ~~~v~v~~~~pq~~lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~------G~G~~l~~ 232 (294)
..++.+.+...-..++..+++ +|.- |-.++++||+++|+|+|+-.. ......+.+. ..|..+..
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEECC
Confidence 457777774333466766565 5543 334789999999999998433 3344444442 27877753
Q ss_pred cccCCcccHHHHHHHHHHHHcC
Q 042362 233 EEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 233 ~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
-+.+++.++|.+++++
T Consensus 427 ------~d~~~la~ai~~ll~~ 442 (475)
T cd03813 427 ------ADPEALARAILRLLKD 442 (475)
T ss_pred ------CCHHHHHHHHHHHhcC
Confidence 3689999999999983
No 107
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.55 E-value=0.041 Score=53.04 Aligned_cols=139 Identities=14% Similarity=0.164 Sum_probs=87.0
Q ss_pred CCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHH-hhhcCCCCcEEecCCCccccc
Q 042362 100 PSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSK-EIQGNNKGMVVQGWAPQAKIL 178 (294)
Q Consensus 100 ~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~v~v~~~~pq~~lL 178 (294)
+.-+||+||+......++.+..-++-|...+-.++|..+.+ ++++....+-+-+.+ -+ ...++++.+-.|...-+
T Consensus 428 ~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~--~~~~~~~~l~~la~~~Gv--~~eRL~f~p~~~~~~h~ 503 (620)
T COG3914 428 EDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGG--DDAEINARLRDLAEREGV--DSERLRFLPPAPNEDHR 503 (620)
T ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCC--CcHHHHHHHHHHHHHcCC--ChhheeecCCCCCHHHH
Confidence 45699999999999889999888888888888999998753 222211112111111 01 24456655555544222
Q ss_pred C-CCCcceEEe---cCCchHHHHHHHhCCcEEeeccccchHh--HHHH-HHHhCcEEEecccccCCcccHHHHHHHHHH
Q 042362 179 G-HGSIGGFVS---HCGWGSTVEGIMYGVPIIAVPMVLDQLF--NAKM-VADIGVGLEVPREEINQRVRKKDLARVIKQ 250 (294)
Q Consensus 179 ~-~~~v~~~It---HgG~~s~~Eal~~GvP~i~~P~~~DQ~~--na~~-v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~ 250 (294)
. +.-.++|+. -||+.|..|+++.|||+|.++ ++|+. |+.- +...|+-..+-.+ ..+-+..+|.-
T Consensus 504 a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA~s------~~dYV~~av~~ 574 (620)
T COG3914 504 ARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVADS------RADYVEKAVAF 574 (620)
T ss_pred HhhchhheeeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhcCC------HHHHHHHHHHh
Confidence 1 122333665 589999999999999999975 56654 3333 3445777666431 34556666643
No 108
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.52 E-value=0.13 Score=47.43 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=51.1
Q ss_pred CCCcEEecCC--Ccc---cccCCCCcceEEecCC----chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccc
Q 042362 163 NKGMVVQGWA--PQA---KILGHGSIGGFVSHCG----WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRE 233 (294)
Q Consensus 163 ~~~v~v~~~~--pq~---~lL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~ 233 (294)
..++.+.++. ++. .+++.+++ |+.-.- ..+++||+++|+|+|+....+ ....+.+-..|..+.
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~~~g~~~~-- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDGETGFLVD-- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccCCceEEeC--
Confidence 4567777776 333 45666555 775432 458999999999999875432 223444556777663
Q ss_pred ccCCcccHHHHHHHHHHHHc
Q 042362 234 EINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 234 ~~~~~~t~~~l~~ai~~vl~ 253 (294)
+.+++..+|.+++.
T Consensus 323 ------~~~~~a~~i~~ll~ 336 (372)
T cd03792 323 ------TVEEAAVRILYLLR 336 (372)
T ss_pred ------CcHHHHHHHHHHHc
Confidence 35677889999997
No 109
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=96.46 E-value=0.055 Score=49.94 Aligned_cols=225 Identities=17% Similarity=0.178 Sum_probs=120.7
Q ss_pred HHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeC-CCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCC
Q 042362 37 KAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVG-PLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLS 115 (294)
Q Consensus 37 ~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VG-pl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~ 115 (294)
..+.+.+|.+++ +..||+++++. .+-+..||| |+....+ ..+......+-+....+++++.+--||....-
T Consensus 131 ~~i~~~~D~lLa--ilPFE~~~y~k----~g~~~~yVGHpl~d~i~--~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI 202 (381)
T COG0763 131 VKIAKYVDHLLA--ILPFEPAFYDK----FGLPCTYVGHPLADEIP--LLPDREAAREKLGIDADEKTLALLPGSRRSEI 202 (381)
T ss_pred HHHHHHhhHeee--ecCCCHHHHHh----cCCCeEEeCChhhhhcc--ccccHHHHHHHhCCCCCCCeEEEecCCcHHHH
Confidence 344444566654 45677776543 233488999 6654421 12223344445555556679999999987522
Q ss_pred HHHHHHHHHH---Hh--cCCCcEEEEEeecCCCccchhccCChhhHHhhhcCC---CCcEEecCCCcc--cccCCCCcce
Q 042362 116 QEEMNEIASG---LL--LSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNN---KGMVVQGWAPQA--KILGHGSIGG 185 (294)
Q Consensus 116 ~~~~~~l~~a---l~--~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~---~~v~v~~~~pq~--~lL~~~~v~~ 185 (294)
...+..+.++ |. ..+.+|+.-+.....+ ...+...+.. .+.++. ++. .++..+++
T Consensus 203 ~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~----------~~~~~~~~~~~~~~~~~~~---~~~~~~a~~~aD~-- 267 (381)
T COG0763 203 RRLLPPFVQAAQELKARYPDLKFVLPLVNAKYR----------RIIEEALKWEVAGLSLILI---DGEKRKAFAAADA-- 267 (381)
T ss_pred HHHHHHHHHHHHHHHhhCCCceEEEecCcHHHH----------HHHHHHhhccccCceEEec---CchHHHHHHHhhH--
Confidence 2223333333 32 1456777654322100 0011110001 112221 222 35555554
Q ss_pred EEecCCchHHHHHHHhCCcEEeecc-ccchHhHHHHHHHhC--------cEEEecccccCCcccHHHHHHHHHHHHcCC-
Q 042362 186 FVSHCGWGSTVEGIMYGVPIIAVPM-VLDQLFNAKMVADIG--------VGLEVPREEINQRVRKKDLARVIKQVVEQE- 255 (294)
Q Consensus 186 ~ItHgG~~s~~Eal~~GvP~i~~P~-~~DQ~~na~~v~~~G--------~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~- 255 (294)
.+.-+|. -++|+..+|+|||+.=- ..=-+.-++++.... +|..+-+.--....+++.|.+++..++.++
T Consensus 268 al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~ 346 (381)
T COG0763 268 ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGD 346 (381)
T ss_pred HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChH
Confidence 7777775 47899999999998632 122234555555442 111111100035678999999999999864
Q ss_pred ccHHHHHHHHHHHHHHHhcC--cHHHHHHHHH
Q 042362 256 EGQQIKRKAKELSESIKKKG--DDEEINVVEK 285 (294)
Q Consensus 256 ~~~~~r~~a~~l~~~~~~~~--~~~~~~~v~~ 285 (294)
+-..+++...+|.+.++..+ ..+++.+++.
T Consensus 347 ~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl~~ 378 (381)
T COG0763 347 RREALKEKFRELHQYLREDPASEIAAQAVLEL 378 (381)
T ss_pred hHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 22578888888888888875 4444444443
No 110
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.35 E-value=0.32 Score=50.84 Aligned_cols=113 Identities=12% Similarity=0.115 Sum_probs=67.8
Q ss_pred CCCcEEecCCCccc---ccCCC--CcceEEecC---C-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccc
Q 042362 163 NKGMVVQGWAPQAK---ILGHG--SIGGFVSHC---G-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRE 233 (294)
Q Consensus 163 ~~~v~v~~~~pq~~---lL~~~--~v~~~ItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~ 233 (294)
...+.+.+++++.+ ++..+ ..++||.-. | ..+++||+++|+|+|+-...+ ....+..-..|+.++.
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g~nGlLVdP- 621 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVLDNGLLVDP- 621 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccCCcEEEECC-
Confidence 45677778887763 44433 123477642 2 478999999999999986533 2233444467888853
Q ss_pred ccCCcccHHHHHHHHHHHHcCCc-cHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHh
Q 042362 234 EINQRVRKKDLARVIKQVVEQEE-GQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 288 (294)
Q Consensus 234 ~~~~~~t~~~l~~ai~~vl~~~~-~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~ 288 (294)
-+.++|+++|.+++.+++ -..+.+++++.. +... ...++++++.+..
T Consensus 622 -----~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v---~~FSWe~ia~~yl~~i~~ 670 (1050)
T TIGR02468 622 -----HDQQAIADALLKLVADKQLWAECRQNGLKNI---HLFSWPEHCKTYLSRIAS 670 (1050)
T ss_pred -----CCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH---HHCCHHHHHHHHHHHHHH
Confidence 368999999999998321 123344433322 2334 4444555544443
No 111
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.32 E-value=0.82 Score=43.46 Aligned_cols=180 Identities=14% Similarity=0.210 Sum_probs=100.3
Q ss_pred HHHhhccCCCCceEEEEeCCCccC------C-H---HHHHHHHHHHhcCCCcEEEEEeecCC---CccchhccCChhhHH
Q 042362 91 IMDWLSRKEPSSVVYVSFGSEYFL------S-Q---EEMNEIASGLLLSEVSFIWVVRFHSE---GKFTIEEALPQSFSK 157 (294)
Q Consensus 91 ~~~wl~~~~~~~vVyvs~GS~~~~------~-~---~~~~~l~~al~~~~~~~i~~~~~~~~---~~~~~~~~lp~~~~~ 157 (294)
+..|+.....+++|-|+....... . . +.+.++++.|.+.|+++++..-.... ..+|.. ....+.+
T Consensus 224 ~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~--~~~~l~~ 301 (426)
T PRK10017 224 VQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRM--VALNLRQ 301 (426)
T ss_pred hhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHH--HHHHHHH
Confidence 345665444556888887655421 1 1 23445566666678888766432100 111111 1122333
Q ss_pred hhhcCCCCc-EEe-cCCCcc--cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEE-ecc
Q 042362 158 EIQGNNKGM-VVQ-GWAPQA--KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLE-VPR 232 (294)
Q Consensus 158 ~~~~~~~~v-~v~-~~~pq~--~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~-l~~ 232 (294)
++. ...+. ++. .+-|.. .+++++++ +|..= .-++.=|+..|+|.+.+++ | +-....+.+.|.... ++
T Consensus 302 ~~~-~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~lg~~~~~~~- 373 (426)
T PRK10017 302 HVS-DPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIMQQLGLPEMAID- 373 (426)
T ss_pred hcc-cccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHHHHcCCccEEec-
Confidence 331 11222 222 233333 66776554 77643 4567778999999999998 3 444445577787755 33
Q ss_pred cccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Q 042362 233 EEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKGDDEEINVVEK 285 (294)
Q Consensus 233 ~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~~~~~~~~v~~ 285 (294)
...++.++|.+.+.+++.+ .+.+++..++--+.++....+...++++.
T Consensus 374 ---~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~~v~~~r~~~~~~~~~~~~~ 421 (426)
T PRK10017 374 ---IRHLLDGSLQAMVADTLGQ--LPALNARLAEAVSRERQTGMQMVQSVLER 421 (426)
T ss_pred ---hhhCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3668889999999999974 35566666555555555433334444443
No 112
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=96.26 E-value=0.099 Score=48.61 Aligned_cols=165 Identities=14% Similarity=0.194 Sum_probs=90.6
Q ss_pred CCCeEeeCCCCCCCCC-CCCCCchhHHHhhccCCCCceEEEEeCCCc--c-CCHHHHHHHHHHHhcCCCcEEEEEeecCC
Q 042362 67 KKETIPVGPLVQEPVY-TDNNDDTKIMDWLSRKEPSSVVYVSFGSEY--F-LSQEEMNEIASGLLLSEVSFIWVVRFHSE 142 (294)
Q Consensus 67 ~~~~~~VGpl~~~~~~-~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~--~-~~~~~~~~l~~al~~~~~~~i~~~~~~~~ 142 (294)
+.+++.+|-..-+.-. .......++.+.+.-..+++.|+|++=... . ...+.+..+++++...+.++++.......
T Consensus 166 ~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p 245 (365)
T TIGR03568 166 PDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADA 245 (365)
T ss_pred CCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCC
Confidence 3467778854322000 000122333333332223458888885543 2 34578899999998777666665432211
Q ss_pred CccchhccCChhhHHhhhcCCCCcEEecCCCcc---cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHH
Q 042362 143 GKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAK 219 (294)
Q Consensus 143 ~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~ 219 (294)
...... +.+.+.. +..+++.+.+-++.. .++.++++ +||-++.+- .||.+.|+|.|.+- + -.
T Consensus 246 ~~~~i~----~~i~~~~-~~~~~v~l~~~l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~----R~ 310 (365)
T TIGR03568 246 GSRIIN----EAIEEYV-NEHPNFRLFKSLGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---T----RQ 310 (365)
T ss_pred CchHHH----HHHHHHh-cCCCCEEEECCCChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---C----Cc
Confidence 110011 1111111 014567777665544 67777776 998875554 99999999999763 2 11
Q ss_pred HHHHhCcEEE-ecccccCCcccHHHHHHHHHHHHc
Q 042362 220 MVADIGVGLE-VPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 220 ~v~~~G~G~~-l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
...+.|..+. +. .+.++|.+++.++++
T Consensus 311 e~~~~g~nvl~vg-------~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 311 KGRLRADSVIDVD-------PDKEEIVKAIEKLLD 338 (365)
T ss_pred hhhhhcCeEEEeC-------CCHHHHHHHHHHHhC
Confidence 1223354433 42 368999999999654
No 113
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.24 E-value=0.074 Score=47.71 Aligned_cols=130 Identities=13% Similarity=0.012 Sum_probs=76.0
Q ss_pred eEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc---cccC
Q 042362 103 VVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---KILG 179 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~lL~ 179 (294)
.+.+..|.... .+....+++++...+.++++.-... .. ... ............++.+.+++++. .++.
T Consensus 172 ~~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~-~~-~~~-----~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~ 242 (335)
T cd03802 172 DYLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVS-DP-DYF-----YREIAPELLDGPDIEYLGEVGGAEKAELLG 242 (335)
T ss_pred CEEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCC-CH-HHH-----HHHHHHhcccCCcEEEeCCCCHHHHHHHHH
Confidence 44556676642 2344567777777777766543211 00 000 00111110014688899999886 4566
Q ss_pred CCCcceEEec--CC-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 180 HGSIGGFVSH--CG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 180 ~~~v~~~ItH--gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
.+++-++-+. -| ..+++||+++|+|+|+....+ ....+.+...|..+. ..+++.++|.+++.
T Consensus 243 ~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~~~g~l~~--------~~~~l~~~l~~l~~ 307 (335)
T cd03802 243 NARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDGVTGFLVD--------SVEELAAAVARADR 307 (335)
T ss_pred hCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCCCcEEEeC--------CHHHHHHHHHHHhc
Confidence 6666333232 23 358999999999999876532 223333334788774 28999999998875
No 114
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.10 E-value=0.76 Score=46.41 Aligned_cols=95 Identities=20% Similarity=0.284 Sum_probs=63.1
Q ss_pred CCCcEEecCCCcc-cccCCCCcceEEe---cCC-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCC
Q 042362 163 NKGMVVQGWAPQA-KILGHGSIGGFVS---HCG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQ 237 (294)
Q Consensus 163 ~~~v~v~~~~pq~-~lL~~~~v~~~It---HgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~ 237 (294)
..++.+.+|.++. .+|..+++ ||. +-| .++++||+.+|+|+|+.... .....+.+-..|+.++. +
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg~~GlLv~~----~ 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEGVTGLTLPA----D 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCCCCEEEeCC----C
Confidence 4678888887764 56766666 554 334 57899999999999997653 24445555567888863 4
Q ss_pred cccHHHHHHHHHHHHcC-CccHHHHHHHHHH
Q 042362 238 RVRKKDLARVIKQVVEQ-EEGQQIKRKAKEL 267 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~~-~~~~~~r~~a~~l 267 (294)
..+.+++.+++.+++.+ ..++.+++++++.
T Consensus 643 d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 643 TVTAPDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred CCChHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 45667777777776642 1145666665543
No 115
>PHA01630 putative group 1 glycosyl transferase
Probab=96.01 E-value=1.2 Score=40.76 Aligned_cols=94 Identities=10% Similarity=0.053 Sum_probs=49.9
Q ss_pred CCCcc---cccCCCCcceEEecC--CchHHHHHHHhCCcEEeecccc--chHh---HHHHHHH-----------hCcEEE
Q 042362 171 WAPQA---KILGHGSIGGFVSHC--GWGSTVEGIMYGVPIIAVPMVL--DQLF---NAKMVAD-----------IGVGLE 229 (294)
Q Consensus 171 ~~pq~---~lL~~~~v~~~ItHg--G~~s~~Eal~~GvP~i~~P~~~--DQ~~---na~~v~~-----------~G~G~~ 229 (294)
++|.. .++..+++-++-++. -..+++||+++|+|+|+.-..+ |... |+..+.. .++|..
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~ 276 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF 276 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccc
Confidence 36644 356666662222332 2568999999999999976432 2211 1111100 134554
Q ss_pred ecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH
Q 042362 230 VPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESI 271 (294)
Q Consensus 230 l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~ 271 (294)
+. .+.+++.+++.++|.+...+.++++..+-+...
T Consensus 277 v~-------~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~ 311 (331)
T PHA01630 277 LD-------PDIEDAYQKLLEALANWTPEKKKENLEGRAILY 311 (331)
T ss_pred cC-------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 43 256778888888887421244555444433333
No 116
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=95.70 E-value=0.45 Score=43.73 Aligned_cols=138 Identities=12% Similarity=0.160 Sum_probs=79.6
Q ss_pred CchhHHHhhccCCCCceEEEEeCCCcc----CCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcC
Q 042362 87 DDTKIMDWLSRKEPSSVVYVSFGSEYF----LSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGN 162 (294)
Q Consensus 87 ~~~~~~~wl~~~~~~~vVyvs~GS~~~----~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 162 (294)
.++++.+-+... +.+.|+|=+.+... .....+.++++.|++.+..++..-+.. . .++ ..+ .
T Consensus 166 Pd~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~-~--------~~~-~~~----~ 230 (335)
T PF04007_consen 166 PDPEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE-D--------QRE-LFE----K 230 (335)
T ss_pred CChhHHHHcCCC-CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc-c--------hhh-HHh----c
Confidence 445555555533 45678777766432 234557788999988887644443211 0 111 111 1
Q ss_pred CCCcEE-ecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccH
Q 042362 163 NKGMVV-QGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRK 241 (294)
Q Consensus 163 ~~~v~v-~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~ 241 (294)
- ++.+ ..-+.-.++|.++++ +|+-|| +...||...|+|.|.+ +.++-...-+.+.+.|.-... -+.
T Consensus 231 ~-~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~Gll~~~--------~~~ 297 (335)
T PF04007_consen 231 Y-GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEKGLLYHS--------TDP 297 (335)
T ss_pred c-CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHCCCeEec--------CCH
Confidence 1 1222 222333478888777 998776 7889999999999985 222322333557777763333 367
Q ss_pred HHHHHHHHHHH
Q 042362 242 KDLARVIKQVV 252 (294)
Q Consensus 242 ~~l~~ai~~vl 252 (294)
+++.+.|.+.+
T Consensus 298 ~ei~~~v~~~~ 308 (335)
T PF04007_consen 298 DEIVEYVRKNL 308 (335)
T ss_pred HHHHHHHHHhh
Confidence 77777665544
No 117
>PRK14098 glycogen synthase; Provisional
Probab=95.21 E-value=0.21 Score=48.32 Aligned_cols=132 Identities=12% Similarity=0.042 Sum_probs=72.5
Q ss_pred eEEEEeCCCccCC-HHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc---ccc
Q 042362 103 VVYVSFGSEYFLS-QEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---KIL 178 (294)
Q Consensus 103 vVyvs~GS~~~~~-~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~lL 178 (294)
.+++..|...... .+.+.+.+..+.+.+.+++++ +. +.. ... +.+.+.....+.++.+.+.++.. .++
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~--G~~-~~~----~~l~~l~~~~~~~V~~~g~~~~~~~~~~~ 379 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GS--GDK-EYE----KRFQDFAEEHPEQVSVQTEFTDAFFHLAI 379 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eC--CCH-HHH----HHHHHHHHHCCCCEEEEEecCHHHHHHHH
Confidence 4566667766422 334444444444446665544 32 110 001 12222221234577777777764 466
Q ss_pred CCCCcceEEecCC----chHHHHHHHhCCcEEeecccc--chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHH
Q 042362 179 GHGSIGGFVSHCG----WGSTVEGIMYGVPIIAVPMVL--DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 179 ~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl 252 (294)
+.+++ |+.-.= ..+.+||+++|+|.|+....+ |...+ ...+.+.|..+.. .+.+++.++|.+++
T Consensus 380 a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~~~G~l~~~------~d~~~la~ai~~~l 449 (489)
T PRK14098 380 AGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDKGSGFIFHD------YTPEALVAKLGEAL 449 (489)
T ss_pred HhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCCCceeEeCC------CCHHHHHHHHHHHH
Confidence 66665 665432 247889999999888765422 21110 0112467888753 46899999999876
No 118
>PRK00654 glgA glycogen synthase; Provisional
Probab=95.14 E-value=0.7 Score=44.33 Aligned_cols=136 Identities=13% Similarity=0.117 Sum_probs=69.7
Q ss_pred ceEEEEeCCCccC-CHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcE-EecCCCcc--cc
Q 042362 102 SVVYVSFGSEYFL-SQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMV-VQGWAPQA--KI 177 (294)
Q Consensus 102 ~vVyvs~GS~~~~-~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~-v~~~~pq~--~l 177 (294)
..+++..|..... ..+.+.+.+..+.+.+.+++++ +. +.. . +.+.+.+...+.+.++. ..+|-.+. .+
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~--g~~-~----~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~ 353 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GT--GDP-E----LEEAFRALAARYPGKVGVQIGYDEALAHRI 353 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ec--CcH-H----HHHHHHHHHHHCCCcEEEEEeCCHHHHHHH
Confidence 3566677776642 1233333333333346776665 32 110 0 11122222211333443 34553221 45
Q ss_pred cCCCCcceEEec---CCc-hHHHHHHHhCCcEEeecccc--chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 178 LGHGSIGGFVSH---CGW-GSTVEGIMYGVPIIAVPMVL--DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 178 L~~~~v~~~ItH---gG~-~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
+..+++ |+.- -|. .+.+||+++|+|.|+....+ |.-.+...-.+.+.|..+.. -+.+++.++|.++
T Consensus 354 ~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~------~d~~~la~~i~~~ 425 (466)
T PRK00654 354 YAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDD------FNAEDLLRALRRA 425 (466)
T ss_pred HhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCC------CCHHHHHHHHHHH
Confidence 666665 6653 122 58899999999999864422 21111100012277888853 3689999999998
Q ss_pred Hc
Q 042362 252 VE 253 (294)
Q Consensus 252 l~ 253 (294)
+.
T Consensus 426 l~ 427 (466)
T PRK00654 426 LE 427 (466)
T ss_pred HH
Confidence 75
No 119
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=94.98 E-value=0.27 Score=47.00 Aligned_cols=135 Identities=11% Similarity=0.011 Sum_probs=70.0
Q ss_pred eEEEEeCCCccCC-HHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc---ccc
Q 042362 103 VVYVSFGSEYFLS-QEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---KIL 178 (294)
Q Consensus 103 vVyvs~GS~~~~~-~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~lL 178 (294)
.+++..|...... .+.+.+.+..+.+.+.+++++-.. . .. +.+.+.+.......++.+..-.++. .++
T Consensus 297 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g---~-~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 368 (476)
T cd03791 297 PLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSG---D-PE----YEEALRELAARYPGRVAVLIGYDEALAHLIY 368 (476)
T ss_pred CEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecC---C-HH----HHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Confidence 5666777766422 334444444444455666554221 1 00 1112222111123456543333333 355
Q ss_pred CCCCcceEEec----CCchHHHHHHHhCCcEEeecccc--chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHH
Q 042362 179 GHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVL--DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 179 ~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl 252 (294)
..+++ ++.- +-..+.+||+++|+|.|+....+ |...+...-.+.|.|..+.. -+.+++.++|.+++
T Consensus 369 ~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~------~~~~~l~~~i~~~l 440 (476)
T cd03791 369 AGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEG------YNADALLAALRRAL 440 (476)
T ss_pred HhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCC------CCHHHHHHHHHHHH
Confidence 65555 6643 11257899999999999865422 21111111113358888853 36899999999988
Q ss_pred c
Q 042362 253 E 253 (294)
Q Consensus 253 ~ 253 (294)
.
T Consensus 441 ~ 441 (476)
T cd03791 441 A 441 (476)
T ss_pred H
Confidence 5
No 120
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=94.95 E-value=0.52 Score=45.18 Aligned_cols=131 Identities=11% Similarity=0.014 Sum_probs=71.7
Q ss_pred eEEEEeCCCccC-CHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc---ccc
Q 042362 103 VVYVSFGSEYFL-SQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA---KIL 178 (294)
Q Consensus 103 vVyvs~GS~~~~-~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~---~lL 178 (294)
.+++..|..... ..+.+.+.+..+.+.+.+++++ +. +. .. +.+.+.+...+.+.++.+....+.. .++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~--g~-~~----~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~ 363 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GT--GD-PE----LEEALRELAERYPGNVRVIIGYDEALAHLIY 363 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CC--CC-HH----HHHHHHHHHHHCCCcEEEEEcCCHHHHHHHH
Confidence 566667776642 2334444444444445666655 22 11 00 1112222111134456555445543 356
Q ss_pred CCCCcceEEecC---Cc-hHHHHHHHhCCcEEeeccccchHhHHHHHHHh------CcEEEecccccCCcccHHHHHHHH
Q 042362 179 GHGSIGGFVSHC---GW-GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI------GVGLEVPREEINQRVRKKDLARVI 248 (294)
Q Consensus 179 ~~~~v~~~ItHg---G~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~------G~G~~l~~~~~~~~~t~~~l~~ai 248 (294)
..+++ ++.-. |. .+++||+++|+|.|+-...+ ....+.+. +.|..+.. -+.+++.++|
T Consensus 364 ~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~~------~d~~~la~~i 431 (473)
T TIGR02095 364 AGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFEE------YDPGALLAAL 431 (473)
T ss_pred HhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeCC------CCHHHHHHHH
Confidence 66565 66432 32 47899999999999865422 22222332 78888853 3688999999
Q ss_pred HHHHc
Q 042362 249 KQVVE 253 (294)
Q Consensus 249 ~~vl~ 253 (294)
.+++.
T Consensus 432 ~~~l~ 436 (473)
T TIGR02095 432 SRALR 436 (473)
T ss_pred HHHHH
Confidence 99875
No 121
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=94.81 E-value=0.32 Score=35.23 Aligned_cols=80 Identities=18% Similarity=0.198 Sum_probs=48.3
Q ss_pred cCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhC-cEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHH
Q 042362 189 HCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIG-VGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKEL 267 (294)
Q Consensus 189 HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l 267 (294)
+|-..-+.|++++|+|+|+-+. ..... +-..| -++... +.+++.++|..++++ ....++-+++-
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~-~~~~~~~~~~~~--------~~~el~~~i~~ll~~--~~~~~~ia~~a 73 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLRE-IFEDGEHIITYN--------DPEELAEKIEYLLEN--PEERRRIAKNA 73 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHH-HcCCCCeEEEEC--------CHHHHHHHHHHHHCC--HHHHHHHHHHH
Confidence 4555689999999999998754 12222 22234 344432 799999999999983 12344444444
Q ss_pred HHHHHhcC--cHHHHHHH
Q 042362 268 SESIKKKG--DDEEINVV 283 (294)
Q Consensus 268 ~~~~~~~~--~~~~~~~v 283 (294)
.+.+++.- ...+++++
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 45554432 44444443
No 122
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=93.99 E-value=0.066 Score=39.93 Aligned_cols=51 Identities=16% Similarity=0.242 Sum_probs=42.7
Q ss_pred hhHHHhhccCCCCceEEEEeCCCccC---CH--HHHHHHHHHHhcCCCcEEEEEee
Q 042362 89 TKIMDWLSRKEPSSVVYVSFGSEYFL---SQ--EEMNEIASGLLLSEVSFIWVVRF 139 (294)
Q Consensus 89 ~~~~~wl~~~~~~~vVyvs~GS~~~~---~~--~~~~~l~~al~~~~~~~i~~~~~ 139 (294)
..+..|+...+.++.|+||+||.... .. ..+..++++++..+..+|..+..
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~ 83 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPA 83 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETT
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCH
Confidence 45667999999999999999998863 22 47889999999999999998764
No 123
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=93.97 E-value=1.5 Score=39.82 Aligned_cols=58 Identities=14% Similarity=0.090 Sum_probs=41.1
Q ss_pred CcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHh---HHHHHHHhCcEEEec
Q 042362 173 PQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLF---NAKMVADIGVGLEVP 231 (294)
Q Consensus 173 pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~---na~~v~~~G~G~~l~ 231 (294)
|....|+.++. ++||--..+.+.||+..|+|+.++|+-.-... -...+.+.|+-..+.
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~~ 281 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPFT 281 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEECC
Confidence 44477777764 57777778899999999999999998762112 233455567777665
No 124
>PLN02846 digalactosyldiacylglycerol synthase
Probab=93.94 E-value=1.4 Score=42.37 Aligned_cols=72 Identities=11% Similarity=0.141 Sum_probs=49.3
Q ss_pred EecCCCcccccCCCCcceEEecC----CchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHH
Q 042362 168 VQGWAPQAKILGHGSIGGFVSHC----GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKD 243 (294)
Q Consensus 168 v~~~~pq~~lL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~ 243 (294)
+.++.+...++...++ ||.-+ =.++++||+++|+|+|+.-... + ..+.+.+.|.... +.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~~ng~~~~--------~~~~ 352 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQFPNCRTYD--------DGKG 352 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecCCceEecC--------CHHH
Confidence 4455555567776655 87663 3588999999999999975432 2 3344445555442 5789
Q ss_pred HHHHHHHHHcC
Q 042362 244 LARVIKQVVEQ 254 (294)
Q Consensus 244 l~~ai~~vl~~ 254 (294)
+.++|.++|.+
T Consensus 353 ~a~ai~~~l~~ 363 (462)
T PLN02846 353 FVRATLKALAE 363 (462)
T ss_pred HHHHHHHHHcc
Confidence 99999999974
No 125
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=93.83 E-value=1.6 Score=42.92 Aligned_cols=64 Identities=20% Similarity=0.238 Sum_probs=45.8
Q ss_pred CCCcEEecCCCcc-cccCCCCcceEEec---CC-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecc
Q 042362 163 NKGMVVQGWAPQA-KILGHGSIGGFVSH---CG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPR 232 (294)
Q Consensus 163 ~~~v~v~~~~pq~-~lL~~~~v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~ 232 (294)
..++.+.+|..+. .+|..+++ ||.. -| .++++||+++|+|+|+.... .+...+.+-..|..++.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG~nG~LVp~ 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEGVSGFILDD 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccCCcEEEECC
Confidence 4678888886543 56776666 7753 33 57999999999999987653 35566666778988863
No 126
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=93.23 E-value=3 Score=39.79 Aligned_cols=186 Identities=10% Similarity=0.119 Sum_probs=99.7
Q ss_pred HHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCC
Q 042362 32 KDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSE 111 (294)
Q Consensus 32 ~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~ 111 (294)
+.-.+....+ .+.+|+.|-.+-+. ......+..+..++++|=+...+ ...+..+.+++++
T Consensus 230 y~~~l~~~~~-~~~iIv~T~~q~~d-i~~r~~~~~~~~~ip~g~i~~~~--------------~~~r~~~~~l~~t---- 289 (438)
T TIGR02919 230 MKLLLDNETR-NKKIIIPNKNEYEK-IKELLDNEYQEQISQLGYLYPFK--------------KDNKYRKQALILT---- 289 (438)
T ss_pred HHHHhcCccc-cCeEEeCCHHHHHH-HHHHhCcccCceEEEEEEEEeec--------------cccCCcccEEEEC----
Confidence 3334445555 89999999432221 11111222233567777763211 1122334477766
Q ss_pred ccCCHHHHHHHHHHHhc-CCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcE-EecCCCcc--cccCCCCcceEE
Q 042362 112 YFLSQEEMNEIASGLLL-SEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMV-VQGWAPQA--KILGHGSIGGFV 187 (294)
Q Consensus 112 ~~~~~~~~~~l~~al~~-~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~-v~~~~pq~--~lL~~~~v~~~I 187 (294)
..+.++.+.....+ .++.|=..... . ..+.+.+. . ...|++ ..++.++. .++..+++-+-|
T Consensus 290 ---~s~~I~~i~~Lv~~lPd~~f~Iga~t--e--------~s~kL~~L-~-~y~nvvly~~~~~~~l~~ly~~~dlyLdi 354 (438)
T TIGR02919 290 ---NSDQIEHLEEIVQALPDYHFHIAALT--E--------MSSKLMSL-D-KYDNVKLYPNITTQKIQELYQTCDIYLDI 354 (438)
T ss_pred ---CHHHHHHHHHHHHhCCCcEEEEEecC--c--------ccHHHHHH-H-hcCCcEEECCcChHHHHHHHHhccEEEEc
Confidence 13444444444333 44554333221 1 00111111 1 224554 44666633 788899998888
Q ss_pred ecCC--chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHH
Q 042362 188 SHCG--WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAK 265 (294)
Q Consensus 188 tHgG--~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~ 265 (294)
+|+. ..++.||+.+|+|++..=.... +...+.. |..+.. -+.+++.++|.++|.+ ...++++..
T Consensus 355 n~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~~---g~l~~~------~~~~~m~~~i~~lL~d--~~~~~~~~~ 420 (438)
T TIGR02919 355 NHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIAS---ENIFEH------NEVDQLISKLKDLLND--PNQFRELLE 420 (438)
T ss_pred cccccHHHHHHHHHHcCCcEEEEecccC---CcccccC---CceecC------CCHHHHHHHHHHHhcC--HHHHHHHHH
Confidence 9977 5889999999999998753321 1122222 555542 3579999999999983 224444444
Q ss_pred H
Q 042362 266 E 266 (294)
Q Consensus 266 ~ 266 (294)
+
T Consensus 421 ~ 421 (438)
T TIGR02919 421 Q 421 (438)
T ss_pred H
Confidence 4
No 127
>PRK10125 putative glycosyl transferase; Provisional
Probab=92.47 E-value=4.5 Score=38.08 Aligned_cols=60 Identities=23% Similarity=0.136 Sum_probs=38.8
Q ss_pred ccCCCCcceEEec----CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHH
Q 042362 177 ILGHGSIGGFVSH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIK 249 (294)
Q Consensus 177 lL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~ 249 (294)
+++.+++ ||.- |-.++++||+++|+|+|+....+ ... +.+.+.|..++. -+.++|++++.
T Consensus 303 ~y~~aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~E-iv~~~~G~lv~~------~d~~~La~~~~ 366 (405)
T PRK10125 303 ALNQMDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----ARE-VLQKSGGKTVSE------EEVLQLAQLSK 366 (405)
T ss_pred HHHhCCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHH-hEeCCcEEEECC------CCHHHHHhccC
Confidence 4444444 6653 33478999999999999987754 222 333357988864 25677776543
No 128
>PLN02501 digalactosyldiacylglycerol synthase
Probab=91.87 E-value=1.6 Score=43.98 Aligned_cols=75 Identities=12% Similarity=0.124 Sum_probs=48.6
Q ss_pred CcEEecCCCcc-cccCCCCcceEEecC----CchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcc
Q 042362 165 GMVVQGWAPQA-KILGHGSIGGFVSHC----GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRV 239 (294)
Q Consensus 165 ~v~v~~~~pq~-~lL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~ 239 (294)
++.+.++.++. .++...++ ||.-+ =.++++||+++|+|+|+....+... +.+.+.|. +. -
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g~nGl-l~-------~ 666 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSFPNCL-TY-------K 666 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----EeecCCeE-ec-------C
Confidence 35555666654 46776665 66532 2478999999999999976544221 22223333 32 2
Q ss_pred cHHHHHHHHHHHHcC
Q 042362 240 RKKDLARVIKQVVEQ 254 (294)
Q Consensus 240 t~~~l~~ai~~vl~~ 254 (294)
+.+++.++|.++|.+
T Consensus 667 D~EafAeAI~~LLsd 681 (794)
T PLN02501 667 TSEDFVAKVKEALAN 681 (794)
T ss_pred CHHHHHHHHHHHHhC
Confidence 689999999999984
No 129
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=90.56 E-value=1.9 Score=38.96 Aligned_cols=142 Identities=13% Similarity=0.131 Sum_probs=75.9
Q ss_pred HhhccCCCCceEEEEeCCCcc---CCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEe
Q 042362 93 DWLSRKEPSSVVYVSFGSEYF---LSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQ 169 (294)
Q Consensus 93 ~wl~~~~~~~vVyvs~GS~~~---~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~ 169 (294)
.++....+++.|.+.-|+... .+.+.+.++++.|.+.++++++..+... + .. ..+.+.+.. . +..+.
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e-~~----~~~~i~~~~--~--~~~l~ 240 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-E-KQ----RAERIAEAL--P--GAVVL 240 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-H-HH----HHHHHHhhC--C--CCeec
Confidence 355433345566666665332 5678899999999776788776544221 0 00 111122111 1 11222
Q ss_pred cC--CCcc-cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcE-EEecccccCCcccHHHHH
Q 042362 170 GW--APQA-KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVG-LEVPREEINQRVRKKDLA 245 (294)
Q Consensus 170 ~~--~pq~-~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G-~~l~~~~~~~~~t~~~l~ 245 (294)
+- ++|. .+++++++ +|+. -.|.++=|.+.|+|.|++=-..+ ..+..=.|-. ..+.. .....++++++.
T Consensus 241 g~~sL~el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~lfg~t~----p~~~~P~~~~~~~~~~-~~~~~I~~~~V~ 312 (319)
T TIGR02193 241 PKMSLAEVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTLYGATD----PGRTGGYGKPNVALLG-ESGANPTPDEVL 312 (319)
T ss_pred CCCCHHHHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEEECCCC----HhhcccCCCCceEEcc-CccCCCCHHHHH
Confidence 22 2333 67777665 8886 46788999999999998611111 1111001111 01111 114678999999
Q ss_pred HHHHHHH
Q 042362 246 RVIKQVV 252 (294)
Q Consensus 246 ~ai~~vl 252 (294)
+++.++|
T Consensus 313 ~ai~~~~ 319 (319)
T TIGR02193 313 AALEELL 319 (319)
T ss_pred HHHHhhC
Confidence 9998764
No 130
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.42 E-value=0.71 Score=45.07 Aligned_cols=74 Identities=12% Similarity=0.219 Sum_probs=55.4
Q ss_pred CCcEEecCCC--cc-cccCCCCcceEEecC---CchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCC
Q 042362 164 KGMVVQGWAP--QA-KILGHGSIGGFVSHC---GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQ 237 (294)
Q Consensus 164 ~~v~v~~~~p--q~-~lL~~~~v~~~ItHg---G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~ 237 (294)
..+.+.++.+ +. .++.+..+ +|.-+ |.++.+||+.+|+|+| .......+.+..-|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li~------ 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYIID------ 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEeC------
Confidence 4677778777 32 56666555 77655 6789999999999999 333455566667787774
Q ss_pred cccHHHHHHHHHHHHcC
Q 042362 238 RVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~~ 254 (294)
+..+|.++|..+|.+
T Consensus 474 --d~~~l~~al~~~L~~ 488 (519)
T TIGR03713 474 --DISELLKALDYYLDN 488 (519)
T ss_pred --CHHHHHHHHHHHHhC
Confidence 689999999999984
No 131
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=90.15 E-value=2.4 Score=40.74 Aligned_cols=103 Identities=10% Similarity=0.075 Sum_probs=67.0
Q ss_pred ecCCCccc---ccCCCCcceEEec---CCc-hHHHHHHHhCCc----EEeeccccchHhHHHHHHHhCcEEEecccccCC
Q 042362 169 QGWAPQAK---ILGHGSIGGFVSH---CGW-GSTVEGIMYGVP----IIAVPMVLDQLFNAKMVADIGVGLEVPREEINQ 237 (294)
Q Consensus 169 ~~~~pq~~---lL~~~~v~~~ItH---gG~-~s~~Eal~~GvP----~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~ 237 (294)
.+.+++.+ ++..+++ |+.- =|+ .++.||+++|+| +|+--+.+-. ..+ +-|+.+++
T Consensus 341 ~~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l---~~gllVnP----- 406 (456)
T TIGR02400 341 NRSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL---NGALLVNP----- 406 (456)
T ss_pred cCCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh---CCcEEECC-----
Confidence 34556654 3555555 7653 354 577899999999 6665554321 222 25777754
Q ss_pred cccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHH
Q 042362 238 RVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLL 287 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~ 287 (294)
.+.++++++|.++++.+ .++.+++.+++.+.+.... ..-++++++.|.
T Consensus 407 -~d~~~lA~aI~~aL~~~-~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 -YDIDGMADAIARALTMP-LEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred -CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 47899999999999742 3466777777777777666 556667766653
No 132
>PRK14099 glycogen synthase; Provisional
Probab=90.04 E-value=8.2 Score=37.34 Aligned_cols=62 Identities=13% Similarity=0.200 Sum_probs=36.0
Q ss_pred cceEEec---CC-chHHHHHHHhCCcEEeecccc--chHhHHHHH-H--HhCcEEEecccccCCcccHHHHHHHHHH
Q 042362 183 IGGFVSH---CG-WGSTVEGIMYGVPIIAVPMVL--DQLFNAKMV-A--DIGVGLEVPREEINQRVRKKDLARVIKQ 250 (294)
Q Consensus 183 v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v-~--~~G~G~~l~~~~~~~~~t~~~l~~ai~~ 250 (294)
.++|+.- =| ..+.+||+++|+|.|+-...+ |........ + ..+.|..++. -+.+++.++|.+
T Consensus 370 aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~------~d~~~La~ai~~ 440 (485)
T PRK14099 370 ADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP------VTADALAAALRK 440 (485)
T ss_pred CCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC------CCHHHHHHHHHH
Confidence 3447753 22 357889999997666654321 211111000 0 1157888853 368999999987
No 133
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.74 E-value=1.6 Score=36.05 Aligned_cols=49 Identities=18% Similarity=0.173 Sum_probs=35.4
Q ss_pred CCCCcEEecCCCcc----cccCCCCcceEEecCC----chHHHHHHHhCCcEEeecccc
Q 042362 162 NNKGMVVQGWAPQA----KILGHGSIGGFVSHCG----WGSTVEGIMYGVPIIAVPMVL 212 (294)
Q Consensus 162 ~~~~v~v~~~~pq~----~lL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~ 212 (294)
...++.+.++++.. .++..+++ +|+... .+++.||+.+|+|+|+.+..+
T Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 159 LLDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred CcccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 45688888887332 23333455 787776 799999999999999977644
No 134
>PLN02939 transferase, transferring glycosyl groups
Probab=87.88 E-value=11 Score=39.36 Aligned_cols=83 Identities=13% Similarity=0.184 Sum_probs=52.0
Q ss_pred CCCcEEecCCCcc---cccCCCCcceEEecC----CchHHHHHHHhCCcEEeecccc--chHhH--HHHH-HHhCcEEEe
Q 042362 163 NKGMVVQGWAPQA---KILGHGSIGGFVSHC----GWGSTVEGIMYGVPIIAVPMVL--DQLFN--AKMV-ADIGVGLEV 230 (294)
Q Consensus 163 ~~~v~v~~~~pq~---~lL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~--DQ~~n--a~~v-~~~G~G~~l 230 (294)
..++.+.++.+.. .++..+++ ||.-. -..+++||+++|+|.|+....+ |...+ ...+ ..-+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3467777777764 46666555 77542 2357999999999998875533 22111 1111 123567777
Q ss_pred cccccCCcccHHHHHHHHHHHHc
Q 042362 231 PREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 231 ~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
.. .+.+++..+|.+++.
T Consensus 914 ~~------~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 LT------PDEQGLNSALERAFN 930 (977)
T ss_pred cC------CCHHHHHHHHHHHHH
Confidence 42 378889999888764
No 135
>PLN02316 synthase/transferase
Probab=86.97 E-value=32 Score=36.53 Aligned_cols=82 Identities=7% Similarity=0.023 Sum_probs=48.8
Q ss_pred CCcEEecCCCcc---cccCCCCcceEEecC----CchHHHHHHHhCCcEEeecccc--chHhHHH------HHH-HhCcE
Q 042362 164 KGMVVQGWAPQA---KILGHGSIGGFVSHC----GWGSTVEGIMYGVPIIAVPMVL--DQLFNAK------MVA-DIGVG 227 (294)
Q Consensus 164 ~~v~v~~~~pq~---~lL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~--DQ~~na~------~v~-~~G~G 227 (294)
.++.+....+.. .++..+++ |+.-. =..+.+||+++|+|.|+-...+ |...... ... ..+.|
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 355554444443 35555554 77532 2368999999999888754422 2221110 000 12578
Q ss_pred EEecccccCCcccHHHHHHHHHHHHc
Q 042362 228 LEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 228 ~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
..+.. .+++.|..+|.+++.
T Consensus 978 flf~~------~d~~aLa~AL~raL~ 997 (1036)
T PLN02316 978 FSFDG------ADAAGVDYALNRAIS 997 (1036)
T ss_pred EEeCC------CCHHHHHHHHHHHHh
Confidence 88853 478899999999986
No 136
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=86.44 E-value=9.8 Score=30.69 Aligned_cols=140 Identities=16% Similarity=0.200 Sum_probs=69.4
Q ss_pred ceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCC
Q 042362 102 SVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHG 181 (294)
Q Consensus 102 ~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~ 181 (294)
|.|-|-+||.. +...++++...|+..|..+-..+-... ..|+.+.+-+ .. +.+.
T Consensus 1 p~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~saH--------R~p~~l~~~~-------------~~---~~~~ 54 (150)
T PF00731_consen 1 PKVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASAH--------RTPERLLEFV-------------KE---YEAR 54 (150)
T ss_dssp -EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--TT--------TSHHHHHHHH-------------HH---TTTT
T ss_pred CeEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEecc--------CCHHHHHHHH-------------HH---hccC
Confidence 35667778765 567888889999888876654443211 1333332211 11 1112
Q ss_pred CcceEEecCCchHHHHHHHh---CCcEEeeccccchHhHH----HHHHH-hCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 182 SIGGFVSHCGWGSTVEGIMY---GVPIIAVPMVLDQLFNA----KMVAD-IGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 182 ~v~~~ItHgG~~s~~Eal~~---GvP~i~~P~~~DQ~~na----~~v~~-~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
.+++||+-+|...-+-.+.+ -.|+|.+|....+.... ..++- .|+++..-. .+ +...-.-..-++|.
T Consensus 55 ~~~viIa~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~---i~--~~~nAA~~A~~ILa 129 (150)
T PF00731_consen 55 GADVIIAVAGMSAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVG---IN--NGFNAALLAARILA 129 (150)
T ss_dssp TESEEEEEEESS--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-S---ST--HHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCcccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEE---cc--CchHHHHHHHHHHh
Confidence 34558888886554444443 58999999876644322 22222 266554421 11 22222222334442
Q ss_pred CCccHHHHHHHHHHHHHHHh
Q 042362 254 QEEGQQIKRKAKELSESIKK 273 (294)
Q Consensus 254 ~~~~~~~r~~a~~l~~~~~~ 273 (294)
- .+++++++.+..++.+++
T Consensus 130 ~-~d~~l~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 130 L-KDPELREKLRAYREKMKE 148 (150)
T ss_dssp T-T-HHHHHHHHHHHHHHHH
T ss_pred c-CCHHHHHHHHHHHHHHHc
Confidence 1 157888888888877653
No 137
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=86.23 E-value=34 Score=33.20 Aligned_cols=109 Identities=6% Similarity=0.016 Sum_probs=72.7
Q ss_pred cEEecCCCccc---ccCCCCcceEEe---cCCchHHH-HHHHhCC----cEEeeccccchHhHHHHHHHhCcEEEecccc
Q 042362 166 MVVQGWAPQAK---ILGHGSIGGFVS---HCGWGSTV-EGIMYGV----PIIAVPMVLDQLFNAKMVADIGVGLEVPREE 234 (294)
Q Consensus 166 v~v~~~~pq~~---lL~~~~v~~~It---HgG~~s~~-Eal~~Gv----P~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 234 (294)
+++.+.+|+.+ ++..+++ ++. .-|+|-+. |.++++. |+|.--+.+- | +...-|+.+++
T Consensus 364 ~~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGa----a---~~l~~AllVNP-- 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGA----A---VELKGALLTNP-- 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEeccccc----h---hhcCCCEEECC--
Confidence 45567777764 4444665 443 34888655 9999877 5555443321 1 34445777764
Q ss_pred cCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHhhc
Q 042362 235 INQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQLV 290 (294)
Q Consensus 235 ~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~~~ 290 (294)
.+.++++++|.+.|+.. ..+-+++.+++.+.++... ..-++.++..|...+
T Consensus 433 ----~d~~~~A~ai~~AL~m~-~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~~~ 484 (487)
T TIGR02398 433 ----YDPVRMDETIYVALAMP-KAEQQARMREMFDAVNYYDVQRWADEFLAAVSPQA 484 (487)
T ss_pred ----CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhhcc
Confidence 57899999999999743 2456777777777777777 666788888877643
No 138
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=84.43 E-value=3.8 Score=39.30 Aligned_cols=103 Identities=11% Similarity=0.099 Sum_probs=60.7
Q ss_pred EecCCCccc---ccCCCCcceEEe---cCC-chHHHHHHHhCCc----EEeeccccchHhHHHHHHHhCcEEEecccccC
Q 042362 168 VQGWAPQAK---ILGHGSIGGFVS---HCG-WGSTVEGIMYGVP----IIAVPMVLDQLFNAKMVADIGVGLEVPREEIN 236 (294)
Q Consensus 168 v~~~~pq~~---lL~~~~v~~~It---HgG-~~s~~Eal~~GvP----~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~ 236 (294)
+.+++++.+ ++..+++ ||. +-| ..+++||+++|+| +|+--..+--. . ..-|+.++.
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~----~---~~~g~lv~p---- 411 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAE----E---LSGALLVNP---- 411 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchh----h---cCCCEEECC----
Confidence 346777764 4666665 663 234 3567899999999 55443322100 0 234666643
Q ss_pred CcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHH
Q 042362 237 QRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKL 286 (294)
Q Consensus 237 ~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l 286 (294)
.+.++++++|.++++++ .++.+++.++.++.+.... ..-+++++..|
T Consensus 412 --~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 412 --YDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred --CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 46899999999999742 2344555555555555555 44455555443
No 139
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=83.91 E-value=1.8 Score=40.18 Aligned_cols=106 Identities=13% Similarity=0.277 Sum_probs=71.2
Q ss_pred CCcEEe---cCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCccc
Q 042362 164 KGMVVQ---GWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVR 240 (294)
Q Consensus 164 ~~v~v~---~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t 240 (294)
.++.+. +|.+...++.++-+ ++|-.| |-.-||-..|+|.+++=...+++. ..+.|.-+.+. .+
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE----~v~agt~~lvg-------~~ 327 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE----GVEAGTNILVG-------TD 327 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc----ceecCceEEeC-------cc
Confidence 345544 44556678888665 888887 446799999999999988777776 34556666664 36
Q ss_pred HHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHhh
Q 042362 241 KKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 289 (294)
Q Consensus 241 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~~ 289 (294)
.+.|.+++.++++ +++..++++. .....| ..+..++++.+...
T Consensus 328 ~~~i~~~~~~ll~---~~~~~~~m~~---~~npYgdg~as~rIv~~l~~~ 371 (383)
T COG0381 328 EENILDAATELLE---DEEFYERMSN---AKNPYGDGNASERIVEILLNY 371 (383)
T ss_pred HHHHHHHHHHHhh---ChHHHHHHhc---ccCCCcCcchHHHHHHHHHHH
Confidence 7999999999998 4444444333 322333 33566777766643
No 140
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=82.36 E-value=8 Score=39.68 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=51.8
Q ss_pred CCCcEEecCC-Ccc---cccCC-C-CcceEEecC----CchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecc
Q 042362 163 NKGMVVQGWA-PQA---KILGH-G-SIGGFVSHC----GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPR 232 (294)
Q Consensus 163 ~~~v~v~~~~-pq~---~lL~~-~-~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~ 232 (294)
..++.+.++. +.. .++.+ + ..++||.-. -..+++||+++|+|+|+--.. ..+..+.+-..|..++.
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~dg~tGfLVdp 693 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQDGVSGFHIDP 693 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCCCcEEEeCC
Confidence 3567666664 322 23332 2 123476532 247899999999999986543 35555666677998864
Q ss_pred cccCCcccHHHHHHHHHHHH
Q 042362 233 EEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 233 ~~~~~~~t~~~l~~ai~~vl 252 (294)
-+.++++++|.+++
T Consensus 694 ------~D~eaLA~aL~~ll 707 (784)
T TIGR02470 694 ------YHGEEAAEKIVDFF 707 (784)
T ss_pred ------CCHHHHHHHHHHHH
Confidence 36788999998876
No 141
>PLN00142 sucrose synthase
Probab=82.15 E-value=7.5 Score=40.01 Aligned_cols=59 Identities=22% Similarity=0.246 Sum_probs=40.4
Q ss_pred ceEEec---CC-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHH
Q 042362 184 GGFVSH---CG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 184 ~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl 252 (294)
++||.- =| ..+++||+++|+|+|+-... .....+++-..|..++. -+.++++++|.+++
T Consensus 668 DVfVlPS~~EgFGLvvLEAMA~GlPVVATdvG----G~~EIV~dG~tG~LV~P------~D~eaLA~aI~~lL 730 (815)
T PLN00142 668 GAFVQPALYEAFGLTVVEAMTCGLPTFATCQG----GPAEIIVDGVSGFHIDP------YHGDEAANKIADFF 730 (815)
T ss_pred CEEEeCCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCCCcEEEeCC------CCHHHHHHHHHHHH
Confidence 346653 23 35899999999999986543 34455555567988864 35788888877654
No 142
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=80.68 E-value=22 Score=32.75 Aligned_cols=141 Identities=10% Similarity=0.125 Sum_probs=84.6
Q ss_pred ceEEEEeCCCccCCHHHHHHHH--HHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCc-EEecCCCcc---
Q 042362 102 SVVYVSFGSEYFLSQEEMNEIA--SGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGM-VVQGWAPQA--- 175 (294)
Q Consensus 102 ~vVyvs~GS~~~~~~~~~~~l~--~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v-~v~~~~pq~--- 175 (294)
..+.|-.|-.+..++.+++.+- ...-..+.++++-++-+.+ +.+..+.+-+.-.+.. ...++ .+.+++|-.
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~-n~~Yi~~V~~~~~~lF--~~~~~~iL~e~mpf~eYl 260 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGAN-NQAYIQQVIQAGKELF--GAENFQILTEFMPFDEYL 260 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCc-hHHHHHHHHHHHHHhc--CccceeEhhhhCCHHHHH
Confidence 3667777887776665554432 1122245666665554321 1111111111111111 22455 346788865
Q ss_pred cccCCCCcceEEec--CCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 176 KILGHGSIGGFVSH--CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 176 ~lL~~~~v~~~ItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
.+|+.++++.|.+. =|.|++.-.++.|+|+++-- +..--..+.+.|+-+... .+.++...|.++=+++..
T Consensus 261 ~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~----~np~~~~l~~~~ipVlf~----~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 261 ALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR----DNPFWQDLKEQGIPVLFY----GDELDEALVREAQRQLAN 332 (360)
T ss_pred HHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec----CChHHHHHHhCCCeEEec----cccCCHHHHHHHHHHHhh
Confidence 78889998777765 48999999999999998742 222233466678777765 367888888888877764
No 143
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.71 E-value=12 Score=33.86 Aligned_cols=100 Identities=18% Similarity=0.231 Sum_probs=57.2
Q ss_pred cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHh--HHHHHHHh-CcEEEecccccCCcccHHHHHHHHHHHH
Q 042362 176 KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLF--NAKMVADI-GVGLEVPREEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 176 ~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~--na~~v~~~-G~G~~l~~~~~~~~~t~~~l~~ai~~vl 252 (294)
++|.++++ .|--+|. .+-.++-.|+|+|.+|-.+-|+. .|.+-..+ |+.+.+-.. ....-..+..+++
T Consensus 307 diLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~------~aq~a~~~~q~ll 377 (412)
T COG4370 307 DILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP------EAQAAAQAVQELL 377 (412)
T ss_pred HHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC------chhhHHHHHHHHh
Confidence 55554443 3333331 23346678999999999998865 55555554 999888531 2223333444588
Q ss_pred cCCccHHHHHHHHHH-HHHHHhcCcHHHHHHHHHHHhh
Q 042362 253 EQEEGQQIKRKAKEL-SESIKKKGDDEEINVVEKLLQL 289 (294)
Q Consensus 253 ~~~~~~~~r~~a~~l-~~~~~~~~~~~~~~~v~~l~~~ 289 (294)
. ++.+.+.++.= ++.+.. ..++.++.+.+.++
T Consensus 378 ~---dp~r~~air~nGqrRiGq--aGaa~rIAe~l~e~ 410 (412)
T COG4370 378 G---DPQRLTAIRHNGQRRIGQ--AGAARRIAEELGEM 410 (412)
T ss_pred c---ChHHHHHHHhcchhhccC--cchHHHHHHHHHHh
Confidence 7 56666666532 233322 34566666666553
No 144
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=79.40 E-value=16 Score=33.36 Aligned_cols=99 Identities=11% Similarity=0.253 Sum_probs=58.7
Q ss_pred CCceEEEEeCCCcc---CCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcE-EecC--CC
Q 042362 100 PSSVVYVSFGSEYF---LSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMV-VQGW--AP 173 (294)
Q Consensus 100 ~~~vVyvs~GS~~~---~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~-v~~~--~p 173 (294)
+++.|.+..|+... .+.+.+.++++.|...++++++.-+... .+.. ..+.+.+.. ...+++ +.+- +.
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~-~e~~----~~~~i~~~~--~~~~~~~l~g~~sL~ 252 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDK-DELA----MVNEIAQGC--QTPRVTSLAGKLTLP 252 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCH-HHHH----HHHHHHhhC--CCCcccccCCCCCHH
Confidence 45677778887543 5678889999988777888776532210 0000 111111111 111111 1222 22
Q ss_pred cc-cccCCCCcceEEecCCchHHHHHHHhCCcEEee
Q 042362 174 QA-KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV 208 (294)
Q Consensus 174 q~-~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 208 (294)
+. .++.++++ ||+. -.|.++=|.+.|+|.|++
T Consensus 253 el~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 253 QLAALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 32 67777665 9998 678899999999999986
No 145
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=79.28 E-value=2.7 Score=38.84 Aligned_cols=112 Identities=14% Similarity=0.210 Sum_probs=65.6
Q ss_pred CCCcEEe-cCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHH----HHHhCcEEEecccccCC
Q 042362 163 NKGMVVQ-GWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKM----VADIGVGLEVPREEINQ 237 (294)
Q Consensus 163 ~~~v~v~-~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~----v~~~G~G~~l~~~~~~~ 237 (294)
..++... +..+-.++|..+++ .||--. +.+.|.+..++|+|....-.|.+...+- ..+...|..+
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~------- 320 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIV------- 320 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE-------
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCcee-------
Confidence 3455443 33345588888666 999874 5788999999999987765555422110 1122333333
Q ss_pred cccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHH
Q 042362 238 RVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLL 287 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~ 287 (294)
-+.++|.++|..++.+ +..++++.++..+.+-... ..+.+++++.+.
T Consensus 321 -~~~~eL~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 321 -YNFEELIEAIENIIEN--PDEYKEKREKFRDKFFKYNDGNSSERIVNYIF 368 (369)
T ss_dssp -SSHHHHHHHHTTHHHH--HHHTHHHHHHHHHHHSTT--S-HHHHHHHHHH
T ss_pred -CCHHHHHHHHHhhhhC--CHHHHHHHHHHHHHhCCCCCchHHHHHHHHHh
Confidence 3789999999998863 3456666777777775532 456677777664
No 146
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=78.23 E-value=6 Score=40.80 Aligned_cols=98 Identities=9% Similarity=0.153 Sum_probs=64.3
Q ss_pred cccCCCCcceEEec---CCch-HHHHHHHhCCc---EEeec-cccchHhHHHHHHHhC-cEEEecccccCCcccHHHHHH
Q 042362 176 KILGHGSIGGFVSH---CGWG-STVEGIMYGVP---IIAVP-MVLDQLFNAKMVADIG-VGLEVPREEINQRVRKKDLAR 246 (294)
Q Consensus 176 ~lL~~~~v~~~ItH---gG~~-s~~Eal~~GvP---~i~~P-~~~DQ~~na~~v~~~G-~G~~l~~~~~~~~~t~~~l~~ 246 (294)
.++..+++ |+.- -|+| +++|++++|.| .+++. +.+ .+.. .| .|+.+++ .+.+++++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G----~~~~---l~~~allVnP------~D~~~lA~ 435 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG----AGQS---LGAGALLVNP------WNITEVSS 435 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC----chhh---hcCCeEEECC------CCHHHHHH
Confidence 45555665 6644 3665 56799999999 44444 322 1111 33 5788854 47899999
Q ss_pred HHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHhh
Q 042362 247 VIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 289 (294)
Q Consensus 247 ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~~ 289 (294)
+|.++|+-+ .++.+++.+++.+.+.... ..-++.+++.|.+.
T Consensus 436 AI~~aL~m~-~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~ 478 (797)
T PLN03063 436 AIKEALNMS-DEERETRHRHNFQYVKTHSAQKWADDFMSELNDI 478 (797)
T ss_pred HHHHHHhCC-HHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHH
Confidence 999999732 2455667777777777766 66677777777654
No 147
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=75.66 E-value=18 Score=31.87 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=56.5
Q ss_pred CceEEEEeCCCcc---CCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcE-EecC--CCc
Q 042362 101 SSVVYVSFGSEYF---LSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMV-VQGW--APQ 174 (294)
Q Consensus 101 ~~vVyvs~GS~~~---~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~-v~~~--~pq 174 (294)
++.|.+..|+... .+.+.+.++++.|.+.++++++..+.. + .+. -+.+.+.. ...++. +.+- +.+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e-~~~----~~~i~~~~--~~~~~~~~~~~~~l~e 191 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--E-REL----AEEIAAAL--GGPRVVNLAGKTSLRE 191 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--h-HHH----HHHHHHhc--CCCccccCcCCCCHHH
Confidence 4577777777543 567889999999987788887664321 1 111 11111111 111211 1221 122
Q ss_pred -ccccCCCCcceEEecCCchHHHHHHHhCCcEEee
Q 042362 175 -AKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV 208 (294)
Q Consensus 175 -~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 208 (294)
..++.++++ +|+.-. |.++=|.+.|+|+|++
T Consensus 192 ~~~li~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 192 LAALLARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHHHHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 256777555 999854 7788888999999986
No 148
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=75.41 E-value=38 Score=30.82 Aligned_cols=135 Identities=14% Similarity=0.206 Sum_probs=78.9
Q ss_pred eEEEEeCCCccCCHHHHHHHH--HHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCc-EEecCCCcc---c
Q 042362 103 VVYVSFGSEYFLSQEEMNEIA--SGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGM-VVQGWAPQA---K 176 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~--~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v-~v~~~~pq~---~ 176 (294)
.+-|-.|-.+..++.+++.+- ......+.+++.-++-+.++. +....+-..-.+.. ...++ .+++++|-. .
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~-~Yi~~V~~~~~~lF--~~~~~~~L~e~l~f~eYl~ 222 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQ-AYIEEVRQAGLALF--GAENFQILTEKLPFDDYLA 222 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCH-HHHHHHHHHHHHhc--CcccEEehhhhCCHHHHHH
Confidence 466667777776766654432 222234567777665533321 11111100000111 11344 455777754 7
Q ss_pred ccCCCCcceEEecC--CchHHHHHHHhCCcEEee---ccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHH
Q 042362 177 ILGHGSIGGFVSHC--GWGSTVEGIMYGVPIIAV---PMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQV 251 (294)
Q Consensus 177 lL~~~~v~~~ItHg--G~~s~~Eal~~GvP~i~~---P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~v 251 (294)
+|+.++++.|+++= |.|++.-.++.|+|+++- |++.| +.+.|+-+... .+.++...+.++=+++
T Consensus 223 lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~n~fwqd-------l~e~gv~Vlf~----~d~L~~~~v~e~~rql 291 (322)
T PRK02797 223 LLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRDNPFWQD-------LTEQGLPVLFT----GDDLDEDIVREAQRQL 291 (322)
T ss_pred HHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecCCchHHH-------HHhCCCeEEec----CCcccHHHHHHHHHHH
Confidence 89999998888764 789999999999999985 33322 66678877654 2566766666654443
No 149
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=74.05 E-value=12 Score=32.96 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=31.4
Q ss_pred cEEecCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeec
Q 042362 166 MVVQGWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVP 209 (294)
Q Consensus 166 v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P 209 (294)
+.+..-++-.++|.+++. +||-.+ ++-+||+.+|+|++++-
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFG 225 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEec
Confidence 444455666788988665 787755 57899999999999975
No 150
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=73.84 E-value=28 Score=31.93 Aligned_cols=98 Identities=8% Similarity=0.174 Sum_probs=58.2
Q ss_pred CceEEEEeCCCcc---CCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCC-cEEecC--CCc
Q 042362 101 SSVVYVSFGSEYF---LSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKG-MVVQGW--APQ 174 (294)
Q Consensus 101 ~~vVyvs~GS~~~---~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-v~v~~~--~pq 174 (294)
++.|.+.-|+... .+.+.+.++++.|.+.++++++..+....+ .. ..+.+.+.. .... +-+.+- +.+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e---~~--~~~~i~~~~--~~~~~~~l~g~~sL~e 255 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDD---LA--CVNEIAQGC--QTPPVTALAGKTTFPE 255 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHH---HH--HHHHHHHhc--CCCccccccCCCCHHH
Confidence 4577788887543 567889999999987788877664321111 00 001111111 1111 212222 223
Q ss_pred c-cccCCCCcceEEecCCchHHHHHHHhCCcEEee
Q 042362 175 A-KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV 208 (294)
Q Consensus 175 ~-~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 208 (294)
. .++.++++ ||+.- .|-++=|.+.|+|.|++
T Consensus 256 l~ali~~a~l--~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 256 LGALIDHAQL--FIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2 67777665 99874 57889999999999986
No 151
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=73.75 E-value=6.5 Score=40.09 Aligned_cols=111 Identities=12% Similarity=0.098 Sum_probs=65.0
Q ss_pred EEecCCCccc---ccCCCCcceEEec---CC-chHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcc
Q 042362 167 VVQGWAPQAK---ILGHGSIGGFVSH---CG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRV 239 (294)
Q Consensus 167 ~v~~~~pq~~---lL~~~~v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~ 239 (294)
++.+++++.+ ++..+++ |+.- -| ..++.||+++|+|-...|+..+--.-+. +..-|+.+++ .
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~---~l~~~llv~P------~ 413 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA---ELAEALLVNP------N 413 (726)
T ss_pred EEeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH---HhCcCeEECC------C
Confidence 3456777764 4555555 6653 24 3567899999775222222221111111 1123777754 4
Q ss_pred cHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHhh
Q 042362 240 RKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 289 (294)
Q Consensus 240 t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~~ 289 (294)
+.++++++|.++++.. ..+.+++.+++.+.+.... ..-++++++.+.+.
T Consensus 414 d~~~la~ai~~~l~~~-~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 414 DIEGIAAAIKRALEMP-EEEQRERMQAMQERLRRYDVHKWASDFLDELREA 463 (726)
T ss_pred CHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 6899999999999732 2355566666666666555 66677777766654
No 152
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=72.65 E-value=20 Score=30.74 Aligned_cols=99 Identities=12% Similarity=0.186 Sum_probs=50.5
Q ss_pred CCceEEEEeCCCcc---CCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCC--Cc
Q 042362 100 PSSVVYVSFGSEYF---LSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWA--PQ 174 (294)
Q Consensus 100 ~~~vVyvs~GS~~~---~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~--pq 174 (294)
+++.|.+..|+... .+.+.+.++++.|.+.+++++...+... ........+.+ .. ....+.+.+-. .+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~-~~~~~~~~~~~----~~--~~~~~~~~~~~~l~e 176 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEE-QEKEIADQIAA----GL--QNPVINLAGKTSLRE 176 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHH-HHHHHHHHHHT----TH--TTTTEEETTTS-HHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchH-HHHHHHHHHHH----hc--ccceEeecCCCCHHH
Confidence 45677777777553 5678899999999888877665533211 00001111111 11 11122222222 12
Q ss_pred -ccccCCCCcceEEecCCchHHHHHHHhCCcEEee
Q 042362 175 -AKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV 208 (294)
Q Consensus 175 -~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 208 (294)
..++.++++ +|+.- .|.++=|.+.|+|+|++
T Consensus 177 ~~ali~~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 177 LAALISRADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHHHTSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred HHHHHhcCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 256667565 88875 57899999999999998
No 153
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=69.62 E-value=38 Score=30.43 Aligned_cols=52 Identities=17% Similarity=0.196 Sum_probs=36.7
Q ss_pred cceEEecCCchHHHHHHHh----CCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIMY----GVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
++++|+.||-||+++++.. ++|++.+-.. .+|... .++.+++.++|.+++++
T Consensus 64 ~d~vi~~GGDGt~l~~~~~~~~~~~pilGIn~G-------------~lGFL~-------~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 64 ADLAVVLGGDGTMLGIGRQLAPYGVPLIGINHG-------------RLGFIT-------DIPLDDMQETLPPMLAG 119 (291)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC-------------Cccccc-------cCCHHHHHHHHHHHHcC
Confidence 4559999999999999874 6788876431 123322 35678888888888763
No 154
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=67.81 E-value=91 Score=27.85 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=64.7
Q ss_pred eEEEEeCCCcc--CCHHHHH----HHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhc--C-CCCcE----Ee
Q 042362 103 VVYVSFGSEYF--LSQEEMN----EIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQG--N-NKGMV----VQ 169 (294)
Q Consensus 103 vVyvs~GS~~~--~~~~~~~----~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~--~-~~~v~----v~ 169 (294)
|..+-.|+... ...+... .+.+.+++.|.+|+.+..... |+.....+++ . ..+++ -+
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRT----------p~~~~s~l~~~l~s~~~i~w~~~d~ 233 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRT----------PDTVKSILKNNLNSSPGIVWNNEDT 233 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCC----------cHHHHHHHHhccccCceeEeCCCCC
Confidence 44455555554 3333333 345667778999988876542 2222211110 0 11111 12
Q ss_pred cCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEee--ccc-cchH-hHHHHHHHhCcEEEec
Q 042362 170 GWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV--PMV-LDQL-FNAKMVADIGVGLEVP 231 (294)
Q Consensus 170 ~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~--P~~-~DQ~-~na~~v~~~G~G~~l~ 231 (294)
++-|..++|+.++. .++|--..|...||...|+|+-++ |.+ .+-+ ..-+.+++.+++....
T Consensus 234 g~NPY~~~La~Ady-ii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~ 298 (329)
T COG3660 234 GYNPYIDMLAAADY-IISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQKIARPFE 298 (329)
T ss_pred CCCchHHHHhhcce-EEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHhhhccccC
Confidence 55688889988765 344555678889999999998774 333 2221 2334455566665553
No 155
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=66.36 E-value=25 Score=28.58 Aligned_cols=26 Identities=19% Similarity=0.401 Sum_probs=19.7
Q ss_pred eEEecCCchHHHH---HHHhCCcEEeecc
Q 042362 185 GFVSHCGWGSTVE---GIMYGVPIIAVPM 210 (294)
Q Consensus 185 ~~ItHgG~~s~~E---al~~GvP~i~~P~ 210 (294)
.++--||.||+.| ++.+++|+++++.
T Consensus 95 ~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 95 VVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred EEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 4555688888764 6679999999985
No 156
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=63.31 E-value=46 Score=30.63 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=52.8
Q ss_pred ceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCCh-hhHH-hhhcCCCCcE------------
Q 042362 102 SVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQ-SFSK-EIQGNNKGMV------------ 167 (294)
Q Consensus 102 ~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~-~~~~-~~~~~~~~v~------------ 167 (294)
.+++.+.||-+...+ ..++++.|.+.++.++|+.....-. . +.+|+ ++.- .+ ...++.
T Consensus 3 ~i~~~~GGTGGHi~P--ala~a~~l~~~g~~v~~vg~~~~~e-~---~l~~~~g~~~~~~--~~~~l~~~~~~~~~~~~~ 74 (352)
T PRK12446 3 KIVFTGGGSAGHVTP--NLAIIPYLKEDNWDISYIGSHQGIE-K---TIIEKENIPYYSI--SSGKLRRYFDLKNIKDPF 74 (352)
T ss_pred eEEEEcCCcHHHHHH--HHHHHHHHHhCCCEEEEEECCCccc-c---ccCcccCCcEEEE--eccCcCCCchHHHHHHHH
Confidence 377777788775322 2356677777889999986432111 0 11222 1100 00 000000
Q ss_pred --EecCCCcccccCCCCcceEEecCCchH---HHHHHHhCCcEEee
Q 042362 168 --VQGWAPQAKILGHGSIGGFVSHCGWGS---TVEGIMYGVPIIAV 208 (294)
Q Consensus 168 --v~~~~pq~~lL~~~~v~~~ItHgG~~s---~~Eal~~GvP~i~~ 208 (294)
+..++--..++..-+-+++|++||.-| ++.|...|+|.++.
T Consensus 75 ~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 75 LVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 000000112344433445999999987 89999999999874
No 157
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=62.12 E-value=21 Score=31.68 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=35.7
Q ss_pred cceEEecCCchHHHHHHH------hCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 183 IGGFVSHCGWGSTVEGIM------YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~------~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
++++|+-||-||++.|+. .++|++.+-.. .+|..- .++.+++.+++.++++
T Consensus 36 ~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G-------------~lGFL~-------~~~~~~~~~~l~~i~~ 92 (265)
T PRK04885 36 PDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG-------------HLGFYT-------DWRPFEVDKLVIALAK 92 (265)
T ss_pred CCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC-------------Cceecc-------cCCHHHHHHHHHHHHc
Confidence 456999999999999986 47898887531 123222 2456777777777775
No 158
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=61.55 E-value=51 Score=29.76 Aligned_cols=96 Identities=13% Similarity=0.173 Sum_probs=56.6
Q ss_pred CCceEEEEeCCCc----cCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcE-EecC--C
Q 042362 100 PSSVVYVSFGSEY----FLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMV-VQGW--A 172 (294)
Q Consensus 100 ~~~vVyvs~GS~~----~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~-v~~~--~ 172 (294)
.++.|.+.-|+.. ..+.+.+.++++.|.+.+++++.. +.+. +. +.. +.+.+.. +.+++ +.+- +
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~-e~-~~~----~~i~~~~---~~~~~~l~g~~sL 242 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAK-DH-PAG----NEIEALL---PGELRNLAGETSL 242 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChh-hH-HHH----HHHHHhC---CcccccCCCCCCH
Confidence 4568888887742 256788999999887777776654 3221 11 111 1121111 11211 1121 2
Q ss_pred Ccc-cccCCCCcceEEecCCchHHHHHHHhCCcEEee
Q 042362 173 PQA-KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV 208 (294)
Q Consensus 173 pq~-~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 208 (294)
.+. .++.++++ +|+.- .|-++=|.+.|+|.|++
T Consensus 243 ~el~ali~~a~l--~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 243 DEAVDLIALAKA--VVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHHHHhCCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 222 56777665 88864 57889999999999985
No 159
>PLN02470 acetolactate synthase
Probab=60.90 E-value=76 Score=31.42 Aligned_cols=28 Identities=18% Similarity=0.457 Sum_probs=23.1
Q ss_pred CcceEEecCCc------hHHHHHHHhCCcEEeec
Q 042362 182 SIGGFVSHCGW------GSTVEGIMYGVPIIAVP 209 (294)
Q Consensus 182 ~v~~~ItHgG~------~s~~Eal~~GvP~i~~P 209 (294)
.++++++|.|- +.+.+|...++|||++.
T Consensus 76 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 76 KVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 46668888884 67889999999999984
No 160
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=59.09 E-value=95 Score=26.16 Aligned_cols=152 Identities=11% Similarity=0.029 Sum_probs=73.7
Q ss_pred hhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCC
Q 042362 94 WLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAP 173 (294)
Q Consensus 94 wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~p 173 (294)
|++-.. +.++.|..|.++ ...+..|...|..+.++... +.+.+.+.. ....+.......
T Consensus 5 ~l~l~~-k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs~~-----------~~~~l~~l~--~~~~i~~~~~~~ 63 (202)
T PRK06718 5 MIDLSN-KRVVIVGGGKVA-------GRRAITLLKYGAHIVVISPE-----------LTENLVKLV--EEGKIRWKQKEF 63 (202)
T ss_pred EEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCeEEEEcCC-----------CCHHHHHHH--hCCCEEEEecCC
Confidence 344333 447777776665 34455666677666555321 112222211 112233333333
Q ss_pred cccccCCCCcceEEecCCchHHHHHHH----hCCcEEeeccccchHhH-----HHHHHHhCcEEEecccccCCcccHHHH
Q 042362 174 QAKILGHGSIGGFVSHCGWGSTVEGIM----YGVPIIAVPMVLDQLFN-----AKMVADIGVGLEVPREEINQRVRKKDL 244 (294)
Q Consensus 174 q~~lL~~~~v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~n-----a~~v~~~G~G~~l~~~~~~~~~t~~~l 244 (294)
+..-+..+++ +|.--+.-.+.+.++ .++++-+ .|.+.. -..+..-++-+.+..+. ....-+..|
T Consensus 64 ~~~~l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g~l~iaIsT~G-~sP~la~~l 136 (202)
T PRK06718 64 EPSDIVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRGKLTISVSTDG-ASPKLAKKI 136 (202)
T ss_pred ChhhcCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcCCeEEEEECCC-CChHHHHHH
Confidence 3344555444 888777666666655 3444332 233222 22223334444454321 111224556
Q ss_pred HHHHHHHHcCCccHHHHHHHHHHHHHHHhc
Q 042362 245 ARVIKQVVEQEEGQQIKRKAKELSESIKKK 274 (294)
Q Consensus 245 ~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~ 274 (294)
++.|..++. ++-..+-+.+.++++.++..
T Consensus 137 r~~ie~~~~-~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 137 RDELEALYD-ESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred HHHHHHHcc-hhHHHHHHHHHHHHHHHHHh
Confidence 666766663 22356777888888887763
No 161
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=58.87 E-value=31 Score=31.07 Aligned_cols=132 Identities=11% Similarity=0.032 Sum_probs=71.5
Q ss_pred CceEE-EEeCCCc--cCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecC--CCcc
Q 042362 101 SSVVY-VSFGSEY--FLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGW--APQA 175 (294)
Q Consensus 101 ~~vVy-vs~GS~~--~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~--~pq~ 175 (294)
++.|. +-.||.. ..+.+.+.++++.+.+.++++++..+... + .+ ..+.+.+ ...++.+.+- +.+.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e-~~----~~~~i~~----~~~~~~l~g~~sL~el 247 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-E-EQ----RAKRLAE----GFPYVEVLPKLSLEQV 247 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-H-HH----HHHHHHc----cCCcceecCCCCHHHH
Confidence 34554 4444432 26778899999999777888765444221 1 11 1111111 1112222222 2232
Q ss_pred -cccCCCCcceEEecCCchHHHHHHHhCCcEEee--ccccchH----hHHHHHHHhCcEEEecccccCCcccHHHHHHHH
Q 042362 176 -KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV--PMVLDQL----FNAKMVADIGVGLEVPREEINQRVRKKDLARVI 248 (294)
Q Consensus 176 -~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~--P~~~DQ~----~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai 248 (294)
.++.++++ ||+-- .|.++=|.+.|+|.|++ |-..... .|...+.. .+.+ ...++++++.+++
T Consensus 248 aali~~a~l--~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~--~~~c------m~~I~~e~V~~~~ 316 (322)
T PRK10964 248 ARVLAGAKA--VVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRS--PGKS------MADLSAETVFQKL 316 (322)
T ss_pred HHHHHhCCE--EEecC-CcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecC--CCcc------cccCCHHHHHHHH
Confidence 67777666 99875 57899999999999996 3211110 01111100 0111 2568899999999
Q ss_pred HHHHc
Q 042362 249 KQVVE 253 (294)
Q Consensus 249 ~~vl~ 253 (294)
+++|.
T Consensus 317 ~~~l~ 321 (322)
T PRK10964 317 ETLIS 321 (322)
T ss_pred HHHhh
Confidence 88764
No 162
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=58.71 E-value=44 Score=27.34 Aligned_cols=83 Identities=17% Similarity=0.241 Sum_probs=56.0
Q ss_pred cCCCcchHHHHHHHhhcc-ccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCce
Q 042362 25 IVNGTENKDRFLKAIDLS-CKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSV 103 (294)
Q Consensus 25 ~~~g~~~~~~~~~~~~~~-~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~v 103 (294)
..+|..++..+++...+. ..+.|+-+.++.-......++..+| .+..+|-..... .....+++.+.++...+. +
T Consensus 30 rv~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP-~l~ivg~~~g~f---~~~~~~~i~~~I~~~~pd-i 104 (172)
T PF03808_consen 30 RVTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYP-GLRIVGYHHGYF---DEEEEEAIINRINASGPD-I 104 (172)
T ss_pred ccCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCC-CeEEEEecCCCC---ChhhHHHHHHHHHHcCCC-E
Confidence 567778888888876663 4778888887765566667888786 667777433221 122566777777765443 9
Q ss_pred EEEEeCCCc
Q 042362 104 VYVSFGSEY 112 (294)
Q Consensus 104 Vyvs~GS~~ 112 (294)
|+|.+|+-.
T Consensus 105 v~vglG~Pk 113 (172)
T PF03808_consen 105 VFVGLGAPK 113 (172)
T ss_pred EEEECCCCH
Confidence 999998853
No 163
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=57.36 E-value=37 Score=33.65 Aligned_cols=61 Identities=11% Similarity=0.186 Sum_probs=35.2
Q ss_pred chHHHHHHHhCCcEEeecccc-chHhHHHHHHHh-CcEEEecccc-cCCcccHHHHHHHHHHHHc
Q 042362 192 WGSTVEGIMYGVPIIAVPMVL-DQLFNAKMVADI-GVGLEVPREE-INQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 192 ~~s~~Eal~~GvP~i~~P~~~-DQ~~na~~v~~~-G~G~~l~~~~-~~~~~t~~~l~~ai~~vl~ 253 (294)
..+++||+++|+|+|+-...+ ..... ..+... ..|+.+.... ..-.-+.+.|.+++.+++.
T Consensus 488 G~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~ 551 (590)
T cd03793 488 GYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQ 551 (590)
T ss_pred CcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhC
Confidence 468999999999999976532 22211 111111 2566664211 0112356778888888775
No 164
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=56.97 E-value=1.7e+02 Score=27.31 Aligned_cols=132 Identities=19% Similarity=0.299 Sum_probs=78.3
Q ss_pred CCCceEEEEeCCCccCCHHHHHHHHHHHhc---------CCCc-EEEEEeecCCCccchhccCChhhHHhhhc-CCCCc-
Q 042362 99 EPSSVVYVSFGSEYFLSQEEMNEIASGLLL---------SEVS-FIWVVRFHSEGKFTIEEALPQSFSKEIQG-NNKGM- 166 (294)
Q Consensus 99 ~~~~vVyvs~GS~~~~~~~~~~~l~~al~~---------~~~~-~i~~~~~~~~~~~~~~~~lp~~~~~~~~~-~~~~v- 166 (294)
++++.++||--|.+ +.+.+..+++||.. .+++ .+..+.+ +| .+-+.+.+.+.+ .=.++
T Consensus 252 ~~~pallvsSTswT--pDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITG-KG-------PlkE~Y~~~I~~~~~~~v~ 321 (444)
T KOG2941|consen 252 PERPALLVSSTSWT--PDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITG-KG-------PLKEKYSQEIHEKNLQHVQ 321 (444)
T ss_pred cCCCeEEEecCCCC--CcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcC-CC-------chhHHHHHHHHHhccccee
Confidence 34678888865544 45667777777762 2333 4444432 22 233444444421 11222
Q ss_pred EEecCCC---cccccCCCCcceEEecCCch-----HHHHHHHhCCcEEeeccccchHhHHHHHHH-hCcEEEecccccCC
Q 042362 167 VVQGWAP---QAKILGHGSIGGFVSHCGWG-----STVEGIMYGVPIIAVPMVLDQLFNAKMVAD-IGVGLEVPREEINQ 237 (294)
Q Consensus 167 ~v~~~~p---q~~lL~~~~v~~~ItHgG~~-----s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~~~ 237 (294)
+.+.|+. ...+|+.+++++.+|-...| -+..-.-+|+|++.+-+ ---..+++ ..-|....
T Consensus 322 ~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f-----kcl~ELVkh~eNGlvF~------ 390 (444)
T KOG2941|consen 322 VCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF-----KCLDELVKHGENGLVFE------ 390 (444)
T ss_pred eeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc-----hhHHHHHhcCCCceEec------
Confidence 4557763 44788899999888876654 35555667888777643 12223344 45677664
Q ss_pred cccHHHHHHHHHHHHc
Q 042362 238 RVRKKDLARVIKQVVE 253 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~ 253 (294)
+.+++.+.+.-++.
T Consensus 391 --Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 391 --DSEELAEQLQMLFK 404 (444)
T ss_pred --cHHHHHHHHHHHHh
Confidence 68899998888886
No 165
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=56.76 E-value=1.3e+02 Score=25.76 Aligned_cols=80 Identities=29% Similarity=0.477 Sum_probs=49.7
Q ss_pred CCCcEEecCCCc---ccccCCCCcceEEec---CCch-HHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEeccccc
Q 042362 163 NKGMVVQGWAPQ---AKILGHGSIGGFVSH---CGWG-STVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEI 235 (294)
Q Consensus 163 ~~~v~v~~~~pq---~~lL~~~~v~~~ItH---gG~~-s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~ 235 (294)
..++...+++++ ..++..+++ ++.- .|.+ ++.||+++|+|+|..... .....+.+.+.|..+.
T Consensus 256 ~~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~~~~g~~~~---- 325 (381)
T COG0438 256 EDNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVEDGETGLLVP---- 325 (381)
T ss_pred CCcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcCCCceEecC----
Confidence 356777888882 245655554 5554 2443 369999999999876542 1222233332466332
Q ss_pred CCcccHHHHHHHHHHHHcC
Q 042362 236 NQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 236 ~~~~t~~~l~~ai~~vl~~ 254 (294)
....+++..++..++.+
T Consensus 326 --~~~~~~~~~~i~~~~~~ 342 (381)
T COG0438 326 --PGDVEELADALEQLLED 342 (381)
T ss_pred --CCCHHHHHHHHHHHhcC
Confidence 11689999999999873
No 166
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=54.91 E-value=30 Score=31.34 Aligned_cols=53 Identities=19% Similarity=0.278 Sum_probs=38.2
Q ss_pred CcceEEecCCchHHHHHHHh----CCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 182 SIGGFVSHCGWGSTVEGIMY----GVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 182 ~v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.++++|+=||-||++.|+.. ++|++.+-.. .+|... .++.+++.+++.+++++
T Consensus 68 ~~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G-------------~lGFLt-------~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 68 SMKFAIVLGGDGTVLSAARQLAPCGIPLLTINTG-------------HLGFLT-------EAYLNQLDEAIDQVLAG 124 (305)
T ss_pred CcCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC-------------CCcccc-------cCCHHHHHHHHHHHHcC
Confidence 35679999999999999884 7898887431 133222 34678888888888863
No 167
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=54.58 E-value=36 Score=30.58 Aligned_cols=115 Identities=11% Similarity=0.054 Sum_probs=59.5
Q ss_pred hcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCc
Q 042362 65 ITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGK 144 (294)
Q Consensus 65 ~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~ 144 (294)
.+|.. |+|-...++..+ ...-.++..+..+.+-+.+-+--.......+...+..+.+++++.|..+++-++......
T Consensus 95 ~~pdr--f~~~~~v~p~~~-~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~ 171 (293)
T COG2159 95 EYPDR--FVGFARVDPRDP-EAAAEELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGA 171 (293)
T ss_pred hCCcc--eeeeeeeCCCch-HHHHHHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCc
Confidence 34444 455544433211 223346666666543333333333333345566688999999999999998765421100
Q ss_pred cchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCC--chHHHHHH
Q 042362 145 FTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCG--WGSTVEGI 199 (294)
Q Consensus 145 ~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG--~~s~~Eal 199 (294)
.+.. . ....+.=..-.-.+|+++.++.|+| ..=..|++
T Consensus 172 -----~~~~-----------~-~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a~ 211 (293)
T COG2159 172 -----GLEK-----------G-HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEAI 211 (293)
T ss_pred -----cccc-----------C-CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHHH
Confidence 0000 0 0000000123345689999999999 54455553
No 168
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=54.04 E-value=49 Score=29.84 Aligned_cols=52 Identities=17% Similarity=0.196 Sum_probs=38.3
Q ss_pred cceEEecCCchHHHHHHH----hCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIM----YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
++++|+=||-||++.|.. .++|++.+-.. .+|... .++.+++.+++.+++.+
T Consensus 69 ~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G-------------~lGFL~-------~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 69 CDLVAVLGGDGTFLSVAREIAPRAVPIIGINQG-------------HLGFLT-------QIPREYMTDKLLPVLEG 124 (296)
T ss_pred CCEEEEECCcHHHHHHHHHhcccCCCEEEEecC-------------CCeEee-------ccCHHHHHHHHHHHHcC
Confidence 556999999999999976 37898887531 144443 25678888888888863
No 169
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=53.52 E-value=47 Score=26.18 Aligned_cols=38 Identities=13% Similarity=0.239 Sum_probs=30.0
Q ss_pred CCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEe
Q 042362 100 PSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVR 138 (294)
Q Consensus 100 ~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~ 138 (294)
...+|++++||......+.++++++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 3459999999999878889999998884 4577777643
No 170
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=53.28 E-value=29 Score=28.31 Aligned_cols=29 Identities=17% Similarity=0.134 Sum_probs=24.1
Q ss_pred eEEEEeCCCccCCHHHHHHHHHHHhcCCC
Q 042362 103 VVYVSFGSEYFLSQEEMNEIASGLLLSEV 131 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~~al~~~~~ 131 (294)
.+|+++||......++++..+.+|.+.+.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~ 31 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALAD 31 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCC
Confidence 78999999987777778888888877663
No 171
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=52.90 E-value=37 Score=30.46 Aligned_cols=52 Identities=10% Similarity=0.148 Sum_probs=36.6
Q ss_pred cceEEecCCchHHHHHHH----hCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIM----YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
++++|+-||-||++.|+. .++|++.+-.. .+|.. ..++.+++.+++.+++.+
T Consensus 65 ~Dlvi~iGGDGT~L~aa~~~~~~~~PilGIN~G-------------~lGFL-------t~~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 65 SDFLISLGGDGTLISLCRKAAEYDKFVLGIHAG-------------HLGFL-------TDITVDEAEKFFQAFFQG 120 (287)
T ss_pred CCEEEEECCCHHHHHHHHHhcCCCCcEEEEeCC-------------CcccC-------CcCCHHHHHHHHHHHHcC
Confidence 456999999999998877 37888877431 13332 235678888888888763
No 172
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=52.48 E-value=48 Score=30.08 Aligned_cols=52 Identities=21% Similarity=0.350 Sum_probs=38.7
Q ss_pred cceEEecCCchHHHHHHHh----CCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIMY----GVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
++++|+=||-||++.|+.. ++|++.+.+. .+|... .+..+++.+++.+++.+
T Consensus 73 ~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G-------------~lGFL~-------~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 73 CELVLVLGGDGTILRAAELARAADVPVLGVNLG-------------HVGFLA-------EAEAEDLDEAVERVVDR 128 (306)
T ss_pred CCEEEEEcCCHHHHHHHHHhccCCCcEEEEecC-------------CCceec-------cCCHHHHHHHHHHHHcC
Confidence 5669999999999999874 7899988652 134433 24678888888888874
No 173
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=52.39 E-value=9.2 Score=36.93 Aligned_cols=62 Identities=16% Similarity=0.215 Sum_probs=40.3
Q ss_pred HHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHH
Q 042362 194 STVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKE 266 (294)
Q Consensus 194 s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~ 266 (294)
++.||+++|+|+++.-- -.=+..++..-.|..+++ +.-....++.++.++.. +++++.++.+
T Consensus 381 v~IEAMa~glPvvAt~~----GGP~EiV~~~~tG~l~dp----~~e~~~~~a~~~~kl~~---~p~l~~~~~~ 442 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNN----GGPAEIVVHGVTGLLIDP----GQEAVAELADALLKLRR---DPELWARMGK 442 (495)
T ss_pred eeHHHHhcCCCEEEecC----CCceEEEEcCCcceeeCC----chHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 68999999999998632 222333444556777753 11223369999999998 5666655543
No 174
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=51.95 E-value=1e+02 Score=28.04 Aligned_cols=99 Identities=12% Similarity=0.126 Sum_probs=57.0
Q ss_pred CCceEEEEeCCCc----cCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcC-CCC-cEEecC--
Q 042362 100 PSSVVYVSFGSEY----FLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGN-NKG-MVVQGW-- 171 (294)
Q Consensus 100 ~~~vVyvs~GS~~----~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~-~~~-v~v~~~-- 171 (294)
+++.|.+.-|+.. ..+.+.+.++++.|...++++++. +.+. +. . ..+.+.+..... ..+ +.+.+-
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~-e~-~----~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAK-DH-E----AGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHH-hH-H----HHHHHHHhcccccccceeeccCCCC
Confidence 4568888888742 256788999999887667776654 3221 10 0 111111111000 001 112222
Q ss_pred CCcc-cccCCCCcceEEecCCchHHHHHHHhCCcEEee
Q 042362 172 APQA-KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV 208 (294)
Q Consensus 172 ~pq~-~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 208 (294)
+.+. .+++++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 252 L~el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 252 LEQAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 2222 57777665 8886 467899999999999985
No 175
>PLN02929 NADH kinase
Probab=50.08 E-value=38 Score=30.65 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=43.1
Q ss_pred cceEEecCCchHHHHHHH---hCCcEEeecccc------chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 183 IGGFVSHCGWGSTVEGIM---YGVPIIAVPMVL------DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~---~GvP~i~~P~~~------DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
++++|+-||-||++.|.. .++|++.+-... .+++|... +..-+|.... ++.+++.++|.+++.
T Consensus 65 ~Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~r~lGfL~~-------~~~~~~~~~L~~il~ 136 (301)
T PLN02929 65 VDLVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-ARRSTGHLCA-------ATAEDFEQVLDDVLF 136 (301)
T ss_pred CCEEEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-cccCcccccc-------CCHHHHHHHHHHHHc
Confidence 456999999999999865 468998875532 12333311 1123565443 568999999999997
Q ss_pred C
Q 042362 254 Q 254 (294)
Q Consensus 254 ~ 254 (294)
+
T Consensus 137 g 137 (301)
T PLN02929 137 G 137 (301)
T ss_pred C
Confidence 4
No 176
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=49.99 E-value=1.4e+02 Score=24.32 Aligned_cols=84 Identities=12% Similarity=0.179 Sum_probs=54.9
Q ss_pred ccCCCcchHHHHHHHhhcc-ccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCc
Q 042362 24 RIVNGTENKDRFLKAIDLS-CKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSS 102 (294)
Q Consensus 24 ~~~~g~~~~~~~~~~~~~~-~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~ 102 (294)
.+-+|..++..+++...++ ..+.++-+.++--....+.++..+| ++..+|-..... ......++.+.+....+.
T Consensus 27 ~r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp-~l~i~g~~~g~~---~~~~~~~i~~~I~~~~pd- 101 (171)
T cd06533 27 ERVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYP-GLKIVGYHHGYF---GPEEEEEIIERINASGAD- 101 (171)
T ss_pred cccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCC-CcEEEEecCCCC---ChhhHHHHHHHHHHcCCC-
Confidence 3677888899998887652 4678888877765555667777776 666677322221 111334467777665443
Q ss_pred eEEEEeCCCc
Q 042362 103 VVYVSFGSEY 112 (294)
Q Consensus 103 vVyvs~GS~~ 112 (294)
+|+|++|+-.
T Consensus 102 iv~vglG~Pk 111 (171)
T cd06533 102 ILFVGLGAPK 111 (171)
T ss_pred EEEEECCCCH
Confidence 9999999843
No 177
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=48.19 E-value=54 Score=29.52 Aligned_cols=52 Identities=19% Similarity=0.365 Sum_probs=38.1
Q ss_pred cceEEecCCchHHHHHHHh----CCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIMY----GVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
++++|+=||-||++.|+.. ++|++.+-+.. +|.. ..++.+++.+++.+++++
T Consensus 65 ~dlvi~lGGDGT~L~aa~~~~~~~~PilGIN~G~-------------lGFL-------t~~~~~~~~~~l~~i~~g 120 (292)
T PRK01911 65 ADMVISIGGDGTFLRTATYVGNSNIPILGINTGR-------------LGFL-------ATVSKEEIEETIDELLNG 120 (292)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEecCC-------------CCcc-------cccCHHHHHHHHHHHHcC
Confidence 4569999999999999883 78988875421 3332 235678888888888874
No 178
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=46.79 E-value=1e+02 Score=24.99 Aligned_cols=27 Identities=15% Similarity=0.331 Sum_probs=21.4
Q ss_pred cceEEecCC------chHHHHHHHhCCcEEeec
Q 042362 183 IGGFVSHCG------WGSTVEGIMYGVPIIAVP 209 (294)
Q Consensus 183 v~~~ItHgG------~~s~~Eal~~GvP~i~~P 209 (294)
..++++|+| .+.+.+|...++|+|++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 344777777 467789999999999995
No 179
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=45.98 E-value=64 Score=28.36 Aligned_cols=52 Identities=12% Similarity=0.234 Sum_probs=36.9
Q ss_pred cceEEecCCchHHHHHHH-hCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIM-YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~-~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
++++|+=||-||++.|+. .++|++.+-.. .+|... .++.+++.+++.+++++
T Consensus 42 ~d~vi~iGGDGT~L~a~~~~~~Pilgin~G-------------~lGfl~-------~~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 42 ADLIIVVGGDGTVLKAAKKVGTPLVGFKAG-------------RLGFLS-------SYTLEEIDRFLEDLKNW 94 (256)
T ss_pred CCEEEEECCcHHHHHHHHHcCCCEEEEeCC-------------CCcccc-------ccCHHHHHHHHHHHHcC
Confidence 456999999999999987 57887776421 133332 35678888888888763
No 180
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=45.79 E-value=67 Score=29.28 Aligned_cols=95 Identities=14% Similarity=0.191 Sum_probs=56.5
Q ss_pred CceEEEEeC-CCc---cCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecC--CCc
Q 042362 101 SSVVYVSFG-SEY---FLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGW--APQ 174 (294)
Q Consensus 101 ~~vVyvs~G-S~~---~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~--~pq 174 (294)
++.|.++-| |.+ ..+.+.+.++++.+.+.++++++..+. .+ .+ ..+.+.+.+ ...+.+.+- +.|
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e-~e----~~~~i~~~~---~~~~~l~~k~sL~e 244 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DE-EE----RAEEIAKGL---PNAVILAGKTSLEE 244 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HH-HH----HHHHHHHhc---CCccccCCCCCHHH
Confidence 568888888 442 367899999999999888666554332 11 11 111222211 111111222 223
Q ss_pred c-cccCCCCcceEEecCCchHHHHHHHhCCcEEee
Q 042362 175 A-KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV 208 (294)
Q Consensus 175 ~-~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 208 (294)
. .++.++++ ||+- -.|-++=|.+.|+|.|++
T Consensus 245 ~~~li~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 245 LAALIAGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred HHHHHhcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 2 56666665 7775 467888899999999996
No 181
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.84 E-value=1.2e+02 Score=24.96 Aligned_cols=76 Identities=14% Similarity=0.155 Sum_probs=51.7
Q ss_pred hHHHHHHHhCCcEEeec-cccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH
Q 042362 193 GSTVEGIMYGVPIIAVP-MVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESI 271 (294)
Q Consensus 193 ~s~~Eal~~GvP~i~~P-~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~ 271 (294)
.|..|-..+|.=.+.=- +.-=+..|+.+.+..|.=.++.- +..+.++|.++..+=|.+++..+++..+.++-+..
T Consensus 88 ~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~~rFgfPfI~aV----kg~~k~~Il~a~~~Rl~n~~e~E~~tAl~eI~rIA 163 (176)
T COG3195 88 ESTSEQASAGLDRLSPEEFARFTELNAAYVERFGFPFIIAV----KGNTKDTILAAFERRLDNDREQEFATALAEIERIA 163 (176)
T ss_pred hhHHHHHhcCcccCCHHHHHHHHHHHHHHHHhcCCceEEee----cCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 45555555554433200 01114679999999998887763 45678999999988887766778888888887765
Q ss_pred H
Q 042362 272 K 272 (294)
Q Consensus 272 ~ 272 (294)
+
T Consensus 164 ~ 164 (176)
T COG3195 164 L 164 (176)
T ss_pred H
Confidence 3
No 182
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=44.14 E-value=84 Score=27.86 Aligned_cols=53 Identities=15% Similarity=0.201 Sum_probs=36.9
Q ss_pred cceEEecCCchHHHHHHHh-----CCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIMY-----GVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~-----GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
++++|+=||-||++.|+.. .+|++.+-..+ .+|..- .++.+++.+++.+++.+
T Consensus 40 ~D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G------------~lGFL~-------~~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 40 ANIIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD------------QLGFYC-------DFHIDDLDKMIQAITKE 97 (264)
T ss_pred ccEEEEECCcHHHHHHHHHhcccCCCeEEeEecCC------------CCeEcc-------cCCHHHHHHHHHHHHcC
Confidence 4569999999999999974 56766654411 233332 35678888888888863
No 183
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=43.81 E-value=56 Score=29.43 Aligned_cols=52 Identities=13% Similarity=0.196 Sum_probs=37.3
Q ss_pred cceEEecCCchHHHHHHH----hCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIM----YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
++++|+=||-||++.++. .++|++.+-... +|.. ..++.+++.+++.+++++
T Consensus 64 ~d~vi~lGGDGT~L~aa~~~~~~~~Pilgin~G~-------------lGFl-------~~~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 64 ADLAIVVGGDGNMLGAARVLARYDIKVIGINRGN-------------LGFL-------TDLDPDNALQQLSDVLEG 119 (292)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCeEEEEECCC-------------CCcc-------cccCHHHHHHHHHHHHcC
Confidence 566999999999999986 367887764411 2332 234678888999988873
No 184
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=43.51 E-value=70 Score=28.84 Aligned_cols=52 Identities=17% Similarity=0.260 Sum_probs=38.3
Q ss_pred cceEEecCCchHHHHHHH----hCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIM----YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.+.+|+=||-||+++++. .++|++.+... .+|.. ..++.+++.++|.+++++
T Consensus 63 ~d~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G-------------~lGFl-------~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 63 CDLVIVVGGDGSLLGAARALARHNVPVLGINRG-------------RLGFL-------TDIRPDELEFKLAEVLDG 118 (295)
T ss_pred CCEEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC-------------ccccc-------ccCCHHHHHHHHHHHHcC
Confidence 455999999999999986 36788887651 23322 235688999999999874
No 185
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.14 E-value=63 Score=28.77 Aligned_cols=52 Identities=17% Similarity=0.357 Sum_probs=37.3
Q ss_pred cceEEecCCchHHHHHHHh-CCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 183 IGGFVSHCGWGSTVEGIMY-GVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~-GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
++++|+=||-||++.++.. ..|++.+-.. .+|.. ..++.+++.+++.+++++
T Consensus 53 ~D~vi~lGGDGT~L~a~~~~~~PilGIN~G-------------~lGFL-------~~~~~~~~~~~l~~i~~g 105 (271)
T PRK01185 53 ADVIITIGGDGTILRTLQRAKGPILGINMG-------------GLGFL-------TEIEIDEVGSAIKKLIRG 105 (271)
T ss_pred CCEEEEEcCcHHHHHHHHHcCCCEEEEECC-------------CCccC-------cccCHHHHHHHHHHHHcC
Confidence 5669999999999999884 5677766331 12332 235778888999998874
No 186
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=41.22 E-value=55 Score=29.18 Aligned_cols=73 Identities=16% Similarity=0.206 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchH
Q 042362 115 SQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGS 194 (294)
Q Consensus 115 ~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s 194 (294)
+.+..+++.+++.+...+.||.++...+. ..+.++++...+-.+|++ ||-+.-..+
T Consensus 47 ~~~Ra~dL~~a~~d~~i~aI~~~rGG~ga----------------------~rlL~~ld~~~~~~~pK~--~iGySDiTa 102 (282)
T cd07025 47 DEERAADLNAAFADPEIKAIWCARGGYGA----------------------NRLLPYLDYDLIRANPKI--FVGYSDITA 102 (282)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCcCCH----------------------HHhhhhCCHHHHhhCCeE--EEEecHHHH
Confidence 45678889999999999999998754221 112244444444466665 888888888
Q ss_pred HHHHHHh--CCcEEeeccc
Q 042362 195 TVEGIMY--GVPIIAVPMV 211 (294)
Q Consensus 195 ~~Eal~~--GvP~i~~P~~ 211 (294)
++-+++. |++.+--|+.
T Consensus 103 L~~~l~~~~g~~t~hGp~~ 121 (282)
T cd07025 103 LHLALYAKTGLVTFHGPML 121 (282)
T ss_pred HHHHHHHhcCceEEECccc
Confidence 8888764 6777666654
No 187
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=41.01 E-value=99 Score=32.67 Aligned_cols=98 Identities=10% Similarity=0.076 Sum_probs=58.5
Q ss_pred ccCCCCcceEEe---cCCchHH-HHHHHhCC---cEEeeccccchHhHHHHHHHhC-cEEEecccccCCcccHHHHHHHH
Q 042362 177 ILGHGSIGGFVS---HCGWGST-VEGIMYGV---PIIAVPMVLDQLFNAKMVADIG-VGLEVPREEINQRVRKKDLARVI 248 (294)
Q Consensus 177 lL~~~~v~~~It---HgG~~s~-~Eal~~Gv---P~i~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~~~~t~~~l~~ai 248 (294)
++.-+++ |+. .-|+|.+ .|+++++. -.++++-++ .-|.. +| -|+.+++ .+.++++++|
T Consensus 456 lY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfa---Gaa~~---L~~~AllVNP------~D~~~vA~AI 521 (934)
T PLN03064 456 LYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFA---GAAQS---LGAGAILVNP------WNITEVAASI 521 (934)
T ss_pred HHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEEeCCC---chHHH---hCCceEEECC------CCHHHHHHHH
Confidence 3444555 554 3477655 49999954 122223222 12222 23 4677754 5789999999
Q ss_pred HHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHhh
Q 042362 249 KQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 289 (294)
Q Consensus 249 ~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~~ 289 (294)
.++|+-. .++.+++.+++.+.+.... ..-++.|++.|...
T Consensus 522 ~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~ 562 (934)
T PLN03064 522 AQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDT 562 (934)
T ss_pred HHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 9988621 3455666666666666666 55677777777654
No 188
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=40.47 E-value=1.8e+02 Score=22.81 Aligned_cols=26 Identities=12% Similarity=0.345 Sum_probs=20.2
Q ss_pred ceEEecCC------chHHHHHHHhCCcEEeec
Q 042362 184 GGFVSHCG------WGSTVEGIMYGVPIIAVP 209 (294)
Q Consensus 184 ~~~ItHgG------~~s~~Eal~~GvP~i~~P 209 (294)
.++++|+| .+.+.+|...++|+|++.
T Consensus 61 ~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~ 92 (155)
T cd07035 61 GVVLVTSGPGLTNAVTGLANAYLDSIPLLVIT 92 (155)
T ss_pred EEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 34777755 367788999999999985
No 189
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=40.16 E-value=1e+02 Score=25.44 Aligned_cols=81 Identities=14% Similarity=0.210 Sum_probs=51.5
Q ss_pred cCCCcchHHHHHHHhhcc-ccEEEEcCchhhcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCce
Q 042362 25 IVNGTENKDRFLKAIDLS-CKLVLIKTSRDIESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSV 103 (294)
Q Consensus 25 ~~~g~~~~~~~~~~~~~~-~~~~lint~~ele~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~v 103 (294)
+.+|.+.+..+++...++ ..+.|+-+-++.-....+.++..+| .+..+|- . ... .....+++.+.+....+. +
T Consensus 30 Rv~G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP-~l~i~g~-~-g~f--~~~~~~~i~~~I~~s~~d-i 103 (177)
T TIGR00696 30 RVAGPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYP-KLKIVGA-F-GPL--EPEERKAALAKIARSGAG-I 103 (177)
T ss_pred ccChHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCC-CCEEEEE-C-CCC--ChHHHHHHHHHHHHcCCC-E
Confidence 577888888888866542 3678888877765566677777775 5555663 1 111 111335566666654433 9
Q ss_pred EEEEeCCC
Q 042362 104 VYVSFGSE 111 (294)
Q Consensus 104 Vyvs~GS~ 111 (294)
|+|++|+-
T Consensus 104 l~VglG~P 111 (177)
T TIGR00696 104 VFVGLGCP 111 (177)
T ss_pred EEEEcCCc
Confidence 99999874
No 190
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=39.63 E-value=65 Score=28.98 Aligned_cols=32 Identities=16% Similarity=0.337 Sum_probs=25.9
Q ss_pred ccCCCCcceEEecCCchHHHHHHHhCCcEEee
Q 042362 177 ILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAV 208 (294)
Q Consensus 177 lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 208 (294)
++..-+-+++|++++..+..-|-..|+|.|.+
T Consensus 88 ~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 88 IIREYNPDLIISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred HHHhcCCCEEEECCchHHHHHHHhcCCCEEEE
Confidence 33444456699999999999999999999965
No 191
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=38.95 E-value=1.7e+02 Score=26.96 Aligned_cols=35 Identities=14% Similarity=0.002 Sum_probs=27.4
Q ss_pred eEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEee
Q 042362 103 VVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRF 139 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~ 139 (294)
++++++|+.+. -.-+..++++|.+.|+.+.+.+..
T Consensus 3 Il~~~~p~~GH--v~P~l~la~~L~~rGh~V~~~t~~ 37 (401)
T cd03784 3 VLITTIGSRGD--VQPLVALAWALRAAGHEVRVATPP 37 (401)
T ss_pred EEEEeCCCcch--HHHHHHHHHHHHHCCCeEEEeeCH
Confidence 78899998774 345667888898999998888654
No 192
>PRK03202 6-phosphofructokinase; Provisional
Probab=38.41 E-value=2.2e+02 Score=25.97 Aligned_cols=37 Identities=30% Similarity=0.392 Sum_probs=29.5
Q ss_pred ccCCCCcceEEecCCchHHHHHHH---hCCcEEeeccccc
Q 042362 177 ILGHGSIGGFVSHCGWGSTVEGIM---YGVPIIAVPMVLD 213 (294)
Q Consensus 177 lL~~~~v~~~ItHgG~~s~~Eal~---~GvP~i~~P~~~D 213 (294)
.|..-.++.+|.=||.+|..-|.. +++|+|++|-..|
T Consensus 88 ~l~~~~Id~Li~IGGd~s~~~a~~L~e~~i~vigiPkTID 127 (320)
T PRK03202 88 NLKKLGIDALVVIGGDGSYMGAKRLTEHGIPVIGLPGTID 127 (320)
T ss_pred HHHHcCCCEEEEeCChHHHHHHHHHHhcCCcEEEeccccc
Confidence 344567899999999999877755 5999999997544
No 193
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=38.13 E-value=71 Score=31.65 Aligned_cols=53 Identities=23% Similarity=0.407 Sum_probs=38.8
Q ss_pred CcceEEecCCchHHHHHHHh----CCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 182 SIGGFVSHCGWGSTVEGIMY----GVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 182 ~v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.++++|+-||-||++.|... ++|++.+-+.. +|.. ..++.+++.+++.+++++
T Consensus 348 ~~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G~-------------lGFL-------~~~~~~~~~~~l~~~~~g 404 (569)
T PRK14076 348 EISHIISIGGDGTVLRASKLVNGEEIPIICINMGT-------------VGFL-------TEFSKEEIFKAIDSIISG 404 (569)
T ss_pred CCCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCCC-------------CCcC-------cccCHHHHHHHHHHHHcC
Confidence 35679999999999999874 78988875421 3332 235678888888888864
No 194
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=37.49 E-value=85 Score=28.66 Aligned_cols=64 Identities=17% Similarity=0.322 Sum_probs=50.9
Q ss_pred cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCC
Q 042362 176 KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQE 255 (294)
Q Consensus 176 ~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~ 255 (294)
..+.|.++=.+.-.||+||+..-+.. . .+.++.++|...++.-|.
T Consensus 96 SYFK~sDLWIVMEYCGAGSiSDI~R~-----------------------------R----~K~L~E~EIs~iL~~TLK-- 140 (502)
T KOG0574|consen 96 SYFKHSDLWIVMEYCGAGSISDIMRA-----------------------------R----RKPLSEQEISAVLRDTLK-- 140 (502)
T ss_pred hhccCCceEeehhhcCCCcHHHHHHH-----------------------------h----cCCccHHHHHHHHHHHHh--
Confidence 44677777668889999999987654 1 467899999999999887
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 042362 256 EGQQIKRKAKELSESIKKKG 275 (294)
Q Consensus 256 ~~~~~r~~a~~l~~~~~~~~ 275 (294)
+-+|-.-++++.+.++++.
T Consensus 141 -GL~YLH~~~KIHRDIKAGN 159 (502)
T KOG0574|consen 141 -GLQYLHDLKKIHRDIKAGN 159 (502)
T ss_pred -HHHHHHHHHHHHhhccccc
Confidence 6788888888888887644
No 195
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.82 E-value=68 Score=25.97 Aligned_cols=69 Identities=14% Similarity=0.207 Sum_probs=46.4
Q ss_pred eccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC---cHHHHHHHH
Q 042362 208 VPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG---DDEEINVVE 284 (294)
Q Consensus 208 ~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~---~~~~~~~v~ 284 (294)
.|-.-.+..+|+.+.+.--++. .-..+.|.+.+.+++.+ ++.-+-.+.++++.+...| ...+.+++-
T Consensus 78 yPWt~~~L~aa~el~ee~eeLs--------~deke~~~~sl~dL~~d--~PkT~vA~~rfKk~~~K~g~~v~~~~~dIlV 147 (158)
T PF10083_consen 78 YPWTENALEAANELIEEDEELS--------PDEKEQFKESLPDLTKD--TPKTKVAATRFKKILSKAGSIVGDAIRDILV 147 (158)
T ss_pred CchHHHHHHHHHHHHHHhhcCC--------HHHHHHHHhhhHHHhhc--CCccHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4555666777877776433322 22578899999999986 6777888889999887755 444555444
Q ss_pred HH
Q 042362 285 KL 286 (294)
Q Consensus 285 ~l 286 (294)
.+
T Consensus 148 dv 149 (158)
T PF10083_consen 148 DV 149 (158)
T ss_pred HH
Confidence 43
No 196
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=36.66 E-value=94 Score=28.84 Aligned_cols=102 Identities=17% Similarity=0.262 Sum_probs=63.4
Q ss_pred EEecCCCcccccCCCCcceEEecC---Cch-HHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHH
Q 042362 167 VVQGWAPQAKILGHGSIGGFVSHC---GWG-STVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKK 242 (294)
Q Consensus 167 ~v~~~~pq~~lL~~~~v~~~ItHg---G~~-s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~ 242 (294)
.+.+-.+-...|+. .++++|+|= |.| .-.|+++-|-|+| +|+..+.+ +|..-+ .++..
T Consensus 256 sfegR~~~p~fla~-~tD~VvSHqWeN~lNYlY~daLyggYPLV---------HNS~~l~d--~GYYY~------~fD~~ 317 (364)
T PF10933_consen 256 SFEGRFDFPDFLAQ-HTDAVVSHQWENPLNYLYYDALYGGYPLV---------HNSPLLKD--VGYYYP------DFDAF 317 (364)
T ss_pred EEeeecChHHHHHh-CCCEEEeccccchhhHHHHHHHhcCCCcc---------cCcchhcc--cCcCCC------CccHH
Confidence 33444444444443 356699994 333 3469999999998 78887776 787764 45555
Q ss_pred HHHHHHHHHHc--CCccHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Q 042362 243 DLARVIKQVVE--QEEGQQIKRKAKELSESIKKKGDDEEINVVEKL 286 (294)
Q Consensus 243 ~l~~ai~~vl~--~~~~~~~r~~a~~l~~~~~~~~~~~~~~~v~~l 286 (294)
+=.+++.+++. |..-+.|+++++++=..+.-....+++...+.|
T Consensus 318 ~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 318 EGARQLLRAIREHDADLDAYRARARRLLDRLSPENPANVRAYEARL 363 (364)
T ss_pred HHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Confidence 55666666654 233478999998876665443345555554443
No 197
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=36.54 E-value=1.2e+02 Score=28.19 Aligned_cols=70 Identities=17% Similarity=0.298 Sum_probs=46.8
Q ss_pred cceEEecCCchHHHHHHHh------------C-----CcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHH
Q 042362 183 IGGFVSHCGWGSTVEGIMY------------G-----VPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLA 245 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~------------G-----vP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~ 245 (294)
.++++|.||..+.+-|+.+ | .|.|.++-.+ ++-..+.+.-.|+|++.-+..++..++.++|.
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~ 182 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAARILGLGVRKIPTDEDGRMDIEALE 182 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHHHHTTSEEEEE-BBTTSSB-HHHHH
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhcceeeeEEEEecCCcchhhhHHHhh
Confidence 5679999999888877643 2 4566565444 45566666677999776543335678889999
Q ss_pred HHHHHHHc
Q 042362 246 RVIKQVVE 253 (294)
Q Consensus 246 ~ai~~vl~ 253 (294)
++|.+...
T Consensus 183 ~~l~~~~~ 190 (373)
T PF00282_consen 183 KALEKDIA 190 (373)
T ss_dssp HHHHHHHH
T ss_pred hhhccccc
Confidence 98887653
No 198
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=36.31 E-value=48 Score=29.35 Aligned_cols=39 Identities=18% Similarity=0.315 Sum_probs=22.7
Q ss_pred ceEEEEeCCCccCCHH-HHHHHHHHHhc--CCCcEEEEEeec
Q 042362 102 SVVYVSFGSEYFLSQE-EMNEIASGLLL--SEVSFIWVVRFH 140 (294)
Q Consensus 102 ~vVyvs~GS~~~~~~~-~~~~l~~al~~--~~~~~i~~~~~~ 140 (294)
-+|+|||||......+ .+..+-+.+++ .++.+-|++.+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 3789999998764433 56666665544 678888887653
No 199
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=35.81 E-value=2.4e+02 Score=27.16 Aligned_cols=89 Identities=21% Similarity=0.293 Sum_probs=65.5
Q ss_pred CCCCcEEecCCCc-------------ccccCCCCcceEEecCCc--------------hHHHHHHHhCCcEEee-----c
Q 042362 162 NNKGMVVQGWAPQ-------------AKILGHGSIGGFVSHCGW--------------GSTVEGIMYGVPIIAV-----P 209 (294)
Q Consensus 162 ~~~~v~v~~~~pq-------------~~lL~~~~v~~~ItHgG~--------------~s~~Eal~~GvP~i~~-----P 209 (294)
.+++++-++|..+ .-+=.|+-++++||--|. -++.|--.-|+|.|++ |
T Consensus 113 ~~pRmV~TPWfd~eIPF~eAAeiGT~KVI~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P 192 (492)
T PF09547_consen 113 EGPRMVKTPWFDEEIPFEEAAEIGTRKVITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKP 192 (492)
T ss_pred CCceeecCCCCCCCCCHHHHHhhcccceeccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 4566777888632 235568999999999885 4567777899999986 6
Q ss_pred cccchHhHHHHHHHh-CcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 210 MVLDQLFNAKMVADI-GVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 210 ~~~DQ~~na~~v~~~-G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
...+-..-+..+++. ++-+..-. -..++.++|...++++|-
T Consensus 193 ~s~et~~L~~eL~ekY~vpVlpvn---c~~l~~~DI~~Il~~vLy 234 (492)
T PF09547_consen 193 YSEETQELAEELEEKYDVPVLPVN---CEQLREEDITRILEEVLY 234 (492)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEee---hHHcCHHHHHHHHHHHHh
Confidence 666666666777665 88776532 367899999999999884
No 200
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=35.60 E-value=16 Score=30.08 Aligned_cols=33 Identities=12% Similarity=0.281 Sum_probs=22.8
Q ss_pred CCCCcceEEecCCchHHHHHHHhCCcEEeecccc
Q 042362 179 GHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVL 212 (294)
Q Consensus 179 ~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~ 212 (294)
.+..++++|++||...++.... ++|+|-+|...
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4456777999999999888877 99999999744
No 201
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=35.33 E-value=1.1e+02 Score=27.15 Aligned_cols=51 Identities=16% Similarity=0.252 Sum_probs=35.0
Q ss_pred cceEEecCCchHHHHHHH----hCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 183 IGGFVSHCGWGSTVEGIM----YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
++++|+=||-||++.|+. .++|++.+-.. .+|... .++.+++.+.+.+++.
T Consensus 43 ~d~vi~iGGDGT~L~aa~~~~~~~~PilgIn~G-------------~lGFL~-------~~~~~~~~~~l~~~~~ 97 (272)
T PRK02231 43 AQLAIVIGGDGNMLGRARVLAKYDIPLIGINRG-------------NLGFLT-------DIDPKNAYEQLEACLE 97 (272)
T ss_pred CCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC-------------CCcccc-------cCCHHHHHHHHHHHHh
Confidence 456999999999998866 36888877431 133332 2456777777777765
No 202
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=34.38 E-value=1.1e+02 Score=29.84 Aligned_cols=53 Identities=9% Similarity=0.212 Sum_probs=37.8
Q ss_pred CcceEEecCCchHHHHHHHh----CCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 182 SIGGFVSHCGWGSTVEGIMY----GVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 182 ~v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.++++|+=||-||++.|+.. ++|++.+-+. .+|... .++.+++.++|.+++.+
T Consensus 262 ~~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~G-------------~LGFLt-------~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 262 KVDLVITLGGDGTVLWAASMFKGPVPPVVPFSMG-------------SLGFMT-------PFHSEQYRDCLDAILKG 318 (508)
T ss_pred CCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC-------------Ccceec-------ccCHHHHHHHHHHHHcC
Confidence 45679999999999999874 5677766320 244432 35678888888888863
No 203
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=34.08 E-value=2.3e+02 Score=25.84 Aligned_cols=37 Identities=27% Similarity=0.396 Sum_probs=29.3
Q ss_pred ccCCCCcceEEecCCchHHHHHHH---hCCcEEeeccccc
Q 042362 177 ILGHGSIGGFVSHCGWGSTVEGIM---YGVPIIAVPMVLD 213 (294)
Q Consensus 177 lL~~~~v~~~ItHgG~~s~~Eal~---~GvP~i~~P~~~D 213 (294)
.|..-.++.+|.=||-+|..-|.. +|+|+|.+|-.-|
T Consensus 87 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~i~vigiPkTID 126 (317)
T cd00763 87 QLKKHGIDALVVIGGDGSYMGAMRLTEHGFPCVGLPGTID 126 (317)
T ss_pred HHHHcCCCEEEEECCchHHHHHHHHHHcCCCEEEeccccc
Confidence 355568899999999999877755 5999999996443
No 204
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=33.75 E-value=75 Score=24.58 Aligned_cols=37 Identities=19% Similarity=0.488 Sum_probs=26.1
Q ss_pred ceEEEEeCCCccCCHHHHHHHHHHHhc--CCCcEEEEEe
Q 042362 102 SVVYVSFGSEYFLSQEEMNEIASGLLL--SEVSFIWVVR 138 (294)
Q Consensus 102 ~vVyvs~GS~~~~~~~~~~~l~~al~~--~~~~~i~~~~ 138 (294)
.+|+|+|||......+.+..+.+.+++ .++.+-|...
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 489999999886445667777777753 4456666653
No 205
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=32.90 E-value=31 Score=27.18 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=26.5
Q ss_pred eEEEEeCCCccCCHHHHHHHHHHHh-----cCCCcEEEEEeec
Q 042362 103 VVYVSFGSEYFLSQEEMNEIASGLL-----LSEVSFIWVVRFH 140 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~~al~-----~~~~~~i~~~~~~ 140 (294)
+|+|+.|+-..+.-..+..++.... .....++|+++..
T Consensus 4 vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 4 VVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 8999999987655566666666665 2446899999863
No 206
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]
Probab=32.90 E-value=5.2e+02 Score=25.93 Aligned_cols=115 Identities=23% Similarity=0.350 Sum_probs=57.8
Q ss_pred CceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCC
Q 042362 101 SSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGH 180 (294)
Q Consensus 101 ~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~ 180 (294)
..|++++||++.. .....++.|.+.|..+=++- .. .-..|.+.+..++....+.++. +..
T Consensus 502 ~~vail~~G~~~~----~al~vae~L~~~Gi~~TVvd-~r------fvkPlD~~ll~~La~~h~~~vt---------lEe 561 (627)
T COG1154 502 EKVAILAFGTMLP----EALKVAEKLNAYGISVTVVD-PR------FVKPLDEALLLELAKSHDLVVT---------LEE 561 (627)
T ss_pred CcEEEEecchhhH----HHHHHHHHHHhcCCCcEEEc-Ce------ecCCCCHHHHHHHHhhcCeEEE---------Eec
Confidence 4499999999874 44455666666554332110 00 0012334443333111121211 122
Q ss_pred CCcceEEecCCchH-HHHHHH-hC--CcEEe--ec-cccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 181 GSIGGFVSHCGWGS-TVEGIM-YG--VPIIA--VP-MVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 181 ~~v~~~ItHgG~~s-~~Eal~-~G--vP~i~--~P-~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
. +-+||.|| ++|.+. +| +|++. +| .+.||..-...+.+.| ++++.|.+.|...+.
T Consensus 562 ~-----~~~GG~Gs~v~efl~~~~~~~~v~~lglpd~fi~hg~~~el~~~~g-------------Ld~~~i~~~i~~~l~ 623 (627)
T COG1154 562 N-----VVDGGFGSAVLEFLAAHGILVPVLNLGLPDEFIDHGSPEELLAELG-------------LDAEGIARRILEWLK 623 (627)
T ss_pred C-----cccccHHHHHHHHHHhcCCCCceEEecCChHhhccCCHHHHHHHcC-------------CCHHHHHHHHHHHHh
Confidence 1 23788877 556665 44 55544 44 2445554444444433 467778877777664
No 207
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=32.70 E-value=2.8e+02 Score=23.45 Aligned_cols=117 Identities=10% Similarity=0.096 Sum_probs=68.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchHHH
Q 042362 117 EEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGSTV 196 (294)
Q Consensus 117 ~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~ 196 (294)
..-.++++.|...+..+++..+.. .-|.+.|.+++ .++=+- =||++ .=.++|..+..
T Consensus 66 ~~d~~l~~~l~~~~~dlvvLAGyM--------rIL~~~fl~~~--~grIlN-----------IHPSL--LP~f~G~h~~~ 122 (200)
T COG0299 66 AFDRALVEALDEYGPDLVVLAGYM--------RILGPEFLSRF--EGRILN-----------IHPSL--LPAFPGLHAHE 122 (200)
T ss_pred HHHHHHHHHHHhcCCCEEEEcchH--------HHcCHHHHHHh--hcceEe-----------cCccc--ccCCCCchHHH
Confidence 344568888988888888776532 23566777666 332222 26666 66789999999
Q ss_pred HHHHhCCcEEeecccc-chHhHHHHHHHhCcEEEeccc--ccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHH
Q 042362 197 EGIMYGVPIIAVPMVL-DQLFNAKMVADIGVGLEVPRE--EINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELS 268 (294)
Q Consensus 197 Eal~~GvP~i~~P~~~-DQ~~na~~v~~~G~G~~l~~~--~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~ 268 (294)
+|+.+|+..-++-.++ | +..-.|..+... .-...-|.++|.+.|.+.= ..-|-+..+.+.
T Consensus 123 ~A~~aG~k~sG~TVH~V~--------e~vD~GpII~Q~~Vpv~~~Dt~etl~~RV~~~E----h~lyp~~v~~~~ 185 (200)
T COG0299 123 QALEAGVKVSGCTVHFVT--------EGVDTGPIIAQAAVPVLPGDTAETLEARVLEQE----HRLYPLAVKLLA 185 (200)
T ss_pred HHHHcCCCccCcEEEEEc--------cCCCCCCeEEEEeeeecCCCCHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 9999999976655432 2 111122222100 0011227888888777642 244555444443
No 208
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=32.57 E-value=3.2e+02 Score=23.38 Aligned_cols=39 Identities=15% Similarity=0.123 Sum_probs=26.8
Q ss_pred chHHHHHHHhCCcEEeeccccc--hHhHHHHHHHhCcEEEe
Q 042362 192 WGSTVEGIMYGVPIIAVPMVLD--QLFNAKMVADIGVGLEV 230 (294)
Q Consensus 192 ~~s~~Eal~~GvP~i~~P~~~D--Q~~na~~v~~~G~G~~l 230 (294)
+.++..|+..|+|+.++|-..+ +..-...+.+.|+....
T Consensus 171 l~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~GA~~i~ 211 (220)
T TIGR00732 171 LITARYALEQGREVFAYPGDLNSPESDGCHKLIEQGAALIT 211 (220)
T ss_pred HHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCCCEEEC
Confidence 5777788999999999996443 33334555677865443
No 209
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH). Dehydroquinate synthase-like. This superfamily divides into two subgroups: the dehydroquinate synthase-like, and a large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. Dehydroquinate synthase-like group includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. The alcohol dehydrogenases in this superfamily contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alc
Probab=32.34 E-value=1e+02 Score=27.87 Aligned_cols=28 Identities=36% Similarity=0.725 Sum_probs=18.1
Q ss_pred cceEEecCCchHHHHHH-----Hh--CCcEEeeccc
Q 042362 183 IGGFVSHCGWGSTVEGI-----MY--GVPIIAVPMV 211 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal-----~~--GvP~i~~P~~ 211 (294)
.+++|.=|| ||++.+. .+ |+|+|.+|..
T Consensus 79 ~d~IIaiGG-Gs~~D~aK~ia~~~~~~~p~i~iPTt 113 (332)
T cd07766 79 VDAVIAVGG-GSTLDTAKAVAALLNRGLPIIIVPTT 113 (332)
T ss_pred cCEEEEeCC-chHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 445777766 4444322 23 9999999964
No 210
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=31.66 E-value=47 Score=27.18 Aligned_cols=30 Identities=17% Similarity=0.412 Sum_probs=18.9
Q ss_pred hHHHHHHH-hCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 216 FNAKMVAD-IGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 216 ~na~~v~~-~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.+-...++ -|+|+.+ |+++|.++|.+++..
T Consensus 102 ~d~~~Fe~~cGVGV~V---------T~E~I~~~V~~~i~~ 132 (164)
T PF04558_consen 102 IDVAEFEKACGVGVVV---------TPEQIEAAVEKYIEE 132 (164)
T ss_dssp --HHHHHHTTTTT-------------HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCeEE---------CHHHHHHHHHHHHHH
Confidence 34444444 4999988 899999999999973
No 211
>cd08806 CARD_CARD14_CARMA2 Caspase activation and recruitment domain of CARD14-like proteins. Caspase activation and recruitment domain (CARD) similar to that found in CARD14, also known as BIMP2 or CARMA2 (caspase recruitment domain-containing membrane-associated guanylate kinase protein 2). CARD14 has been identified as a novel member of the MAGUK (membrane-associated guanylate kinase) family that functions as upstream activators of BCL10 (B-cell lymphoma 10) and NF-kB signaling. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways
Probab=31.39 E-value=1.4e+02 Score=21.65 Aligned_cols=35 Identities=23% Similarity=0.452 Sum_probs=26.5
Q ss_pred HHHcCCccHHHHHHHHH---HHHHHHhcCcHHHHHHHHHHH
Q 042362 250 QVVEQEEGQQIKRKAKE---LSESIKKKGDDEEINVVEKLL 287 (294)
Q Consensus 250 ~vl~~~~~~~~r~~a~~---l~~~~~~~~~~~~~~~v~~l~ 287 (294)
++++ ...+..++.+ +=+.++.+|..+...|++.|.
T Consensus 38 eIls---~~t~~~r~~k~g~LLDIL~trG~~g~~aFLeSLe 75 (86)
T cd08806 38 EVLH---SPRLTNRAMRVGHLLDLLKTRGKNGAIAFLESLK 75 (86)
T ss_pred HHHc---cchHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 5665 4667777777 666667788888899998887
No 212
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=31.37 E-value=91 Score=28.96 Aligned_cols=10 Identities=50% Similarity=1.175 Sum_probs=8.6
Q ss_pred CCcEEeeccc
Q 042362 202 GVPIIAVPMV 211 (294)
Q Consensus 202 GvP~i~~P~~ 211 (294)
++|+|++|..
T Consensus 122 ~~P~i~IPTt 131 (375)
T cd08194 122 GLPLIAIPTT 131 (375)
T ss_pred CCCEEEECCC
Confidence 6899999974
No 213
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=31.22 E-value=2.9e+02 Score=24.95 Aligned_cols=37 Identities=32% Similarity=0.413 Sum_probs=29.4
Q ss_pred ccCCCCcceEEecCCchHHHHHHH----hCCcEEeeccccc
Q 042362 177 ILGHGSIGGFVSHCGWGSTVEGIM----YGVPIIAVPMVLD 213 (294)
Q Consensus 177 lL~~~~v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~D 213 (294)
.|..-.++.+|.=||-+|..-|.. .++|+|.+|-..|
T Consensus 86 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 86 NLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 455567899999999999877654 7999999997443
No 214
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=31.18 E-value=60 Score=26.38 Aligned_cols=27 Identities=26% Similarity=0.378 Sum_probs=21.0
Q ss_pred cceEEecCCc------hHHHHHHHhCCcEEeec
Q 042362 183 IGGFVSHCGW------GSTVEGIMYGVPIIAVP 209 (294)
Q Consensus 183 v~~~ItHgG~------~s~~Eal~~GvP~i~~P 209 (294)
.+++++|+|- +.+.||...++|||++.
T Consensus 61 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 61 PVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 3347777774 56779999999999994
No 215
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=31.13 E-value=2.8e+02 Score=22.26 Aligned_cols=26 Identities=19% Similarity=0.402 Sum_probs=19.8
Q ss_pred ceEEecCC------chHHHHHHHhCCcEEeec
Q 042362 184 GGFVSHCG------WGSTVEGIMYGVPIIAVP 209 (294)
Q Consensus 184 ~~~ItHgG------~~s~~Eal~~GvP~i~~P 209 (294)
+++++|.| .+.+.+|...++|+|++.
T Consensus 61 gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 61 GALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred EEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 33666655 466788999999999995
No 216
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=30.88 E-value=1.1e+02 Score=24.97 Aligned_cols=30 Identities=17% Similarity=0.289 Sum_probs=21.7
Q ss_pred CCCceEEEEeCCCccCCHHHHHHHHHHHhc
Q 042362 99 EPSSVVYVSFGSEYFLSQEEMNEIASGLLL 128 (294)
Q Consensus 99 ~~~~vVyvs~GS~~~~~~~~~~~l~~al~~ 128 (294)
+.+..+|+++||......+.+...+..|..
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~ 34 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAA 34 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHh
Confidence 344588999999875456667777777755
No 217
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=30.76 E-value=1.7e+02 Score=25.90 Aligned_cols=91 Identities=11% Similarity=0.173 Sum_probs=40.0
Q ss_pred hHHhhhhhhhcccCCCcchHHHHHHHhhccc--cEEEEcC-chh-hcHHHHHHHhhhcCCCeEeeCCCCCCCCCCCCCCc
Q 042362 13 SEIQKMTQFKHRIVNGTENKDRFLKAIDLSC--KLVLIKT-SRD-IESKYLDYFSYITKKETIPVGPLVQEPVYTDNNDD 88 (294)
Q Consensus 13 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~lint-~~e-le~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~ 88 (294)
.+++.+++......+-......+.+.+.. . +.+|=.| .+. |..+++..+.....++++| ||.++.+ ...-.+
T Consensus 76 ~~l~~~~~~~a~~~~~~~~~~~L~eav~~-~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF--~LSNPt~-~aE~~p 151 (255)
T PF03949_consen 76 EDLNPHKKPFARKTNPEKDWGSLLEAVKG-AKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIF--PLSNPTP-KAECTP 151 (255)
T ss_dssp SSHSHHHHHHHBSSSTTT--SSHHHHHHC-H--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEE--E-SSSCG-GSSS-H
T ss_pred ccCChhhhhhhccCcccccccCHHHHHHh-cCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEE--ECCCCCC-cccCCH
Confidence 34444444443233333322444555554 4 6666665 333 4445666666555556655 5544321 112245
Q ss_pred hhHHHhhccCCCCceEEEEeCCCc
Q 042362 89 TKIMDWLSRKEPSSVVYVSFGSEY 112 (294)
Q Consensus 89 ~~~~~wl~~~~~~~vVyvs~GS~~ 112 (294)
++..+|-+. .++++.||-+
T Consensus 152 eda~~~t~g-----~ai~AtGSpf 170 (255)
T PF03949_consen 152 EDAYEWTDG-----RAIFATGSPF 170 (255)
T ss_dssp HHHHHTTTS-----EEEEEESS--
T ss_pred HHHHhhCCc-----eEEEecCCcc
Confidence 555566432 4455555543
No 218
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=30.72 E-value=88 Score=28.26 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcceEEecCCchH
Q 042362 115 SQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGGFVSHCGWGS 194 (294)
Q Consensus 115 ~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~~ItHgG~~s 194 (294)
+.+...++.+++.+...+.||.++...+. ..+.++++...+-.||++ ||-..-..+
T Consensus 51 ~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~----------------------~rlL~~lD~~~i~~~PK~--fiGySDiTa 106 (308)
T cd07062 51 PEERAEELMAAFADPSIKAIIPTIGGDDS----------------------NELLPYLDYELIKKNPKI--FIGYSDITA 106 (308)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCcccCH----------------------hhhhhhcCHHHHhhCCCE--EEeccHHHH
Confidence 45678889999999999999998753221 222345555555566655 888888788
Q ss_pred HHHHHH--hCCcEEeeccc
Q 042362 195 TVEGIM--YGVPIIAVPMV 211 (294)
Q Consensus 195 ~~Eal~--~GvP~i~~P~~ 211 (294)
++-+++ .|++.+--|+.
T Consensus 107 L~~al~~~~g~~t~hGp~~ 125 (308)
T cd07062 107 LHLAIYKKTGLVTYYGPNL 125 (308)
T ss_pred HHHHHHHhcCCeEEECccc
Confidence 887775 36666666654
No 219
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=30.59 E-value=2.8e+02 Score=24.93 Aligned_cols=68 Identities=18% Similarity=0.152 Sum_probs=40.0
Q ss_pred cCCchHHHHHHHhCCcEEeecccc--chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHH
Q 042362 189 HCGWGSTVEGIMYGVPIIAVPMVL--DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKE 266 (294)
Q Consensus 189 HgG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~ 266 (294)
..|.+....|+.+|+...++-.+. +....+..+.+.-+ .+. ..-|.++|.+.+.++-. .-|-+..+.
T Consensus 205 f~G~~~~~~ai~~G~k~tG~TvH~v~~~lD~GpII~Q~~v--~V~-----~~dt~e~L~~r~~~~E~----~~l~~ai~~ 273 (289)
T PRK13010 205 FKGARPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQDVE--RVD-----HSYSPEDLVAKGRDVEC----LTLARAVKA 273 (289)
T ss_pred CCCCCHHHHHHHcCCCeEEEEEEEEcCCCCCCCceEEEEE--EcC-----CCCCHHHHHHHHHHHHH----HHHHHHHHH
Confidence 358899999999999998876542 22222222222222 222 23377888888877543 445555544
Q ss_pred H
Q 042362 267 L 267 (294)
Q Consensus 267 l 267 (294)
+
T Consensus 274 ~ 274 (289)
T PRK13010 274 F 274 (289)
T ss_pred H
Confidence 4
No 220
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=30.38 E-value=5.6e+02 Score=25.50 Aligned_cols=141 Identities=17% Similarity=0.249 Sum_probs=73.7
Q ss_pred CceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCC
Q 042362 101 SSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGH 180 (294)
Q Consensus 101 ~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~ 180 (294)
.+.|-|-+||.. +...+++....|...|+.+-..+-+. ..+|+.+.+ |+-+.. .
T Consensus 410 ~~~v~i~~gs~s--d~~~~~~~~~~l~~~g~~~~~~v~sa--------hr~~~~~~~-------------~~~~~~---~ 463 (577)
T PLN02948 410 TPLVGIIMGSDS--DLPTMKDAAEILDSFGVPYEVTIVSA--------HRTPERMFS-------------YARSAH---S 463 (577)
T ss_pred CCeEEEEECchh--hHHHHHHHHHHHHHcCCCeEEEEECC--------ccCHHHHHH-------------HHHHHH---H
Confidence 456778888876 45677888888888887765444322 123433221 111110 0
Q ss_pred CCcceEEecCCchHHHHHHHhC---CcEEeeccccc---hHhHHHHHHHh--CcEEEecccccCCcccHHHHHHHHHHHH
Q 042362 181 GSIGGFVSHCGWGSTVEGIMYG---VPIIAVPMVLD---QLFNAKMVADI--GVGLEVPREEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 181 ~~v~~~ItHgG~~s~~Eal~~G---vP~i~~P~~~D---Q~~na~~v~~~--G~G~~l~~~~~~~~~t~~~l~~ai~~vl 252 (294)
..+++||.-.|.-.-+-.+.+| +|+|.+|.-.. -..--.-+.+. |+.+..-. -++..++.-++. +++
T Consensus 464 ~~~~v~i~~ag~~~~l~~~~a~~t~~pvi~vp~~~~~~~g~~~l~s~~~~p~g~pv~~v~--i~~~~~aa~~a~---~i~ 538 (577)
T PLN02948 464 RGLQVIIAGAGGAAHLPGMVASMTPLPVIGVPVKTSHLDGLDSLLSIVQMPRGVPVATVA--IGNATNAGLLAV---RML 538 (577)
T ss_pred CCCCEEEEEcCccccchHHHhhccCCCEEEcCCCCCCCCcHHHHHHHhcCCCCCeEEEEe--cCChHHHHHHHH---HHH
Confidence 1234588888865555555444 89999998432 11111223334 53222210 012334444433 334
Q ss_pred cCCccHHHHHHHHHHHHHHHh
Q 042362 253 EQEEGQQIKRKAKELSESIKK 273 (294)
Q Consensus 253 ~~~~~~~~r~~a~~l~~~~~~ 273 (294)
.- .+++++++.+..++.+++
T Consensus 539 ~~-~~~~~~~~~~~~~~~~~~ 558 (577)
T PLN02948 539 GA-SDPDLLDKMEAYQEDMRD 558 (577)
T ss_pred hc-CCHHHHHHHHHHHHHHHH
Confidence 21 157788888887777765
No 221
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=30.23 E-value=3.2e+02 Score=24.08 Aligned_cols=113 Identities=15% Similarity=0.233 Sum_probs=53.5
Q ss_pred CceEEEEeCCCccCCHHHHHHH---HHHHh-cCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcc-
Q 042362 101 SSVVYVSFGSEYFLSQEEMNEI---ASGLL-LSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQA- 175 (294)
Q Consensus 101 ~~vVyvs~GS~~~~~~~~~~~l---~~al~-~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~- 175 (294)
++.|.|+.......+.+..+.+ ++.+. +.++++++..-.... |.. .-+.+.+++ .....++...-|+.
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~---D~~--~~~~l~~~~--~~~~~i~~~~~~~e~ 244 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQ---DLP--LARALRDQL--LGPAEVLSPLDPEEL 244 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcch---hHH--HHHHHHHhc--CCCcEEEecCCHHHH
Confidence 4577888755333333333344 33433 348887665321111 110 111222222 11112222222332
Q ss_pred -cccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCc
Q 042362 176 -KILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGV 226 (294)
Q Consensus 176 -~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~ 226 (294)
.+++++++ +|+-= .-++.-|+.+|+|.+.+.. | .-....+.+.|+
T Consensus 245 ~~~i~~~~~--vI~~R-lH~~I~A~~~gvP~i~i~y--~-~K~~~~~~~~g~ 290 (298)
T TIGR03609 245 LGLFASARL--VIGMR-LHALILAAAAGVPFVALSY--D-PKVRAFAADAGV 290 (298)
T ss_pred HHHHhhCCE--EEEec-hHHHHHHHHcCCCEEEeec--c-HHHHHHHHHhCC
Confidence 45666554 77743 4456668899999998853 2 233334444443
No 222
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=30.18 E-value=1.6e+02 Score=26.81 Aligned_cols=61 Identities=23% Similarity=0.280 Sum_probs=41.1
Q ss_pred cCCchHHHHHHHhCCcEEeecc-ccchHhHHHHHHH-----hCcEEEecccccCCcccHHHHHHHHHHHH
Q 042362 189 HCGWGSTVEGIMYGVPIIAVPM-VLDQLFNAKMVAD-----IGVGLEVPREEINQRVRKKDLARVIKQVV 252 (294)
Q Consensus 189 HgG~~s~~Eal~~GvP~i~~P~-~~DQ~~na~~v~~-----~G~G~~l~~~~~~~~~t~~~l~~ai~~vl 252 (294)
||||-++.-|++.|.-++.+|- ..|...-...+.+ .+.++.+-. ++..+.+.+.+.+++.+
T Consensus 171 ~~G~LA~~~ala~ga~~iliPE~~~~~~~~~~~i~~~~~~g~~~~vivva---EG~~~~~~l~~~l~~~~ 237 (317)
T cd00763 171 HCGDIALAAGIAGGAEFIVIPEAEFDREEVANRIKAGIERGKKHAIVVVA---EGVYDVDELAKEIEEAT 237 (317)
T ss_pred ChHHHHHHHHHHcCCCEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEEe---CCCCCHHHHHHHHHHHh
Confidence 8999999999999988999994 3444333333432 456666643 34456777777766654
No 223
>PF13941 MutL: MutL protein
Probab=30.07 E-value=3.7e+02 Score=25.91 Aligned_cols=46 Identities=20% Similarity=0.128 Sum_probs=30.6
Q ss_pred eEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEec
Q 042362 185 GFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVP 231 (294)
Q Consensus 185 ~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~ 231 (294)
+.|.=||+.|-.-++..|-|-.-=.+... ...++|-++-.+|++..
T Consensus 251 lvVDIGGATTDVhSv~~~~~~~~~~~~~~-ep~~kRTVEGDLGmr~s 296 (457)
T PF13941_consen 251 LVVDIGGATTDVHSVAEGSPEIPGIVLKP-EPYAKRTVEGDLGMRYS 296 (457)
T ss_pred EEEEccCcccchhhhccCCccccccccCC-cchhhhheeccccceec
Confidence 47888999999999988887666544443 33455556555555553
No 224
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=30.07 E-value=53 Score=29.28 Aligned_cols=51 Identities=16% Similarity=0.260 Sum_probs=35.0
Q ss_pred cceEEecCCchHHHHHHH---hCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHc
Q 042362 183 IGGFVSHCGWGSTVEGIM---YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~---~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~ 253 (294)
++++|+-||-||+++++. .++|++.+|... .|.. ..++.+++.+++.+++.
T Consensus 58 ~d~vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~-------------lGFl-------~~~~~~~~~~~l~~i~~ 111 (277)
T PRK03708 58 VDFIIAIGGDGTILRIEHKTKKDIPILGINMGT-------------LGFL-------TEVEPEETFFALSRLLE 111 (277)
T ss_pred CCEEEEEeCcHHHHHHHHhcCCCCeEEEEeCCC-------------CCcc-------ccCCHHHHHHHHHHHHc
Confidence 556999999999999985 356888887622 1111 22456677777777775
No 225
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=29.92 E-value=65 Score=28.23 Aligned_cols=28 Identities=18% Similarity=0.224 Sum_probs=22.8
Q ss_pred cceEEecCCchHHHHHHHh----CCcEEeecc
Q 042362 183 IGGFVSHCGWGSTVEGIMY----GVPIIAVPM 210 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~----GvP~i~~P~ 210 (294)
++++|+-||-||++.|+.. ++|++.+-.
T Consensus 26 ~Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 26 ADVIVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CCEEEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 4569999999999988774 688887754
No 226
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=29.73 E-value=79 Score=26.91 Aligned_cols=42 Identities=17% Similarity=0.120 Sum_probs=34.2
Q ss_pred HhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEE
Q 042362 93 DWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFI 134 (294)
Q Consensus 93 ~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i 134 (294)
+|....++...++|+|=|.+.++-+....++++|...|..+|
T Consensus 8 TFa~aK~enknaLvtfiTaG~P~v~~T~kilkglq~gG~dII 49 (268)
T KOG4175|consen 8 TFARAKSENKNALVTFITAGDPDVSTTAKILKGLQSGGSDII 49 (268)
T ss_pred HHHHHHhcCCceEEEEEecCCCcHHHHHHHHHHHhcCCcCeE
Confidence 466666666799999999998888888899999988887765
No 227
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=29.42 E-value=1.1e+02 Score=28.30 Aligned_cols=11 Identities=27% Similarity=0.830 Sum_probs=9.1
Q ss_pred CCcEEeecccc
Q 042362 202 GVPIIAVPMVL 212 (294)
Q Consensus 202 GvP~i~~P~~~ 212 (294)
++|+|++|...
T Consensus 124 ~~P~i~VPTta 134 (357)
T cd08181 124 ALPVVAIPTTA 134 (357)
T ss_pred CCCEEEEeCCC
Confidence 78999999743
No 228
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=29.28 E-value=2.2e+02 Score=24.63 Aligned_cols=67 Identities=13% Similarity=0.076 Sum_probs=43.2
Q ss_pred CCCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceEEEEeCCCccCCHH------HHHHHHHHHhcCCCc-EEEE
Q 042362 67 KKETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVVYVSFGSEYFLSQE------EMNEIASGLLLSEVS-FIWV 136 (294)
Q Consensus 67 ~~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~------~~~~l~~al~~~~~~-~i~~ 136 (294)
+..+..|+|-..+. .-.....+..|.+..-+-.++.+|.|..+..... .-.++.+++...|.+ .+|.
T Consensus 10 ~~~vL~v~aHPDDe---~~g~ggtla~~~~~G~~V~v~~lT~Ge~g~~~~~~~l~~~R~~E~~~a~~~LGv~~~~~l 83 (237)
T COG2120 10 PLRVLVVFAHPDDE---EIGCGGTLAKLAARGVEVTVVCLTLGEAGENGGELELGAVRRAEARAAARVLGVRETIFL 83 (237)
T ss_pred CCcEEEEecCCcch---hhccHHHHHHHHHCCCeEEEEEccCCcccccCCccchHHHHHHHHHHHHHhcCCCcceec
Confidence 45678888865542 1224556778887766655777788887754333 556778888888884 4443
No 229
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=29.28 E-value=3.5e+02 Score=22.78 Aligned_cols=154 Identities=15% Similarity=0.116 Sum_probs=71.1
Q ss_pred hhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCC
Q 042362 94 WLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAP 173 (294)
Q Consensus 94 wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~p 173 (294)
|++-.+ +.++.|..|..+ ..-+..|.+.|..+.++.... .+.+.+.. ...++.+..--.
T Consensus 4 ~l~l~g-k~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp~~-----------~~~l~~l~--~~~~i~~~~~~~ 62 (205)
T TIGR01470 4 FANLEG-RAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAEEL-----------ESELTLLA--EQGGITWLARCF 62 (205)
T ss_pred EEEcCC-CeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcCCC-----------CHHHHHHH--HcCCEEEEeCCC
Confidence 344333 347776666654 234455666777766553211 11121111 111333221111
Q ss_pred cccccCCCCcceEEecCCchHHHH-----HHHhCCcEEee--ccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHH
Q 042362 174 QAKILGHGSIGGFVSHCGWGSTVE-----GIMYGVPIIAV--PMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLAR 246 (294)
Q Consensus 174 q~~lL~~~~v~~~ItHgG~~s~~E-----al~~GvP~i~~--P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ 246 (294)
+...|....+ +|..-|...+.+ |-..|+|+-++ |-..| +..-..+..-++-+.+..+. ....-+..|++
T Consensus 63 ~~~dl~~~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~~~g~l~iaisT~G-~sP~la~~lr~ 138 (205)
T TIGR01470 63 DADILEGAFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIVDRSPVVVAISSGG-AAPVLARLLRE 138 (205)
T ss_pred CHHHhCCcEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEEEcCCEEEEEECCC-CCcHHHHHHHH
Confidence 2333554443 777777654443 33467777332 22222 11222222234444444321 11223466777
Q ss_pred HHHHHHcCCccHHHHHHHHHHHHHHHh
Q 042362 247 VIKQVVEQEEGQQIKRKAKELSESIKK 273 (294)
Q Consensus 247 ai~~vl~~~~~~~~r~~a~~l~~~~~~ 273 (294)
.|.+++.. ....+-+.+.+++..++.
T Consensus 139 ~ie~~l~~-~~~~~~~~~~~~R~~~k~ 164 (205)
T TIGR01470 139 RIETLLPP-SLGDLATLAATWRDAVKK 164 (205)
T ss_pred HHHHhcch-hHHHHHHHHHHHHHHHHh
Confidence 77777742 234566677777777665
No 230
>PLN02884 6-phosphofructokinase
Probab=28.94 E-value=5.1e+02 Score=24.61 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=28.6
Q ss_pred cccCCCCcceEEecCCchHHHHHHH-------hC--CcEEeecccc
Q 042362 176 KILGHGSIGGFVSHCGWGSTVEGIM-------YG--VPIIAVPMVL 212 (294)
Q Consensus 176 ~lL~~~~v~~~ItHgG~~s~~Eal~-------~G--vP~i~~P~~~ 212 (294)
+.|..-.++.+|.=||-+|..-|.. .| +|+|.+|-.-
T Consensus 137 ~~L~~~~Id~LivIGGdgS~~~a~~L~~~~~~~g~~i~vIGIPkTI 182 (411)
T PLN02884 137 DSIEARGINMLFVLGGNGTHAGANAIHNECRKRKMKVSVVGVPKTI 182 (411)
T ss_pred HHHHHcCCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEeccccc
Confidence 4455568899999999999865543 56 9999999643
No 231
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=28.80 E-value=82 Score=19.58 Aligned_cols=26 Identities=27% Similarity=0.466 Sum_probs=17.7
Q ss_pred cHHHHHHHHHHHHcCCccHHHHHHHHHH
Q 042362 240 RKKDLARVIKQVVEQEEGQQIKRKAKEL 267 (294)
Q Consensus 240 t~~~l~~ai~~vl~~~~~~~~r~~a~~l 267 (294)
|.++|.+||..+.++. .++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4689999999998732 5676666653
No 232
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=28.38 E-value=1.9e+02 Score=23.92 Aligned_cols=25 Identities=24% Similarity=0.181 Sum_probs=18.7
Q ss_pred eEEecCCchHHHHHHH---------hCCcEEeec
Q 042362 185 GFVSHCGWGSTVEGIM---------YGVPIIAVP 209 (294)
Q Consensus 185 ~~ItHgG~~s~~Eal~---------~GvP~i~~P 209 (294)
.++--||.||+-|.+. +.+|++++=
T Consensus 100 ~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 100 FIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred EEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 4566688999988754 489988874
No 233
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=27.81 E-value=83 Score=29.30 Aligned_cols=11 Identities=64% Similarity=1.059 Sum_probs=8.9
Q ss_pred hCCcEEeeccc
Q 042362 201 YGVPIIAVPMV 211 (294)
Q Consensus 201 ~GvP~i~~P~~ 211 (294)
.++|+|++|..
T Consensus 129 ~~~P~i~IPTT 139 (379)
T TIGR02638 129 PGVPIIAIPTT 139 (379)
T ss_pred CCCCEEEECCC
Confidence 35899999974
No 234
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=27.52 E-value=1.2e+02 Score=23.11 Aligned_cols=34 Identities=9% Similarity=-0.023 Sum_probs=25.3
Q ss_pred eEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEe
Q 042362 103 VVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVR 138 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~ 138 (294)
|+++++||.+. -.-+..+.++|.+.|++|.+.+.
T Consensus 1 Ili~~~Gt~Gh--v~P~lala~~L~~rGh~V~~~~~ 34 (139)
T PF03033_consen 1 ILIATGGTRGH--VYPFLALARALRRRGHEVRLATP 34 (139)
T ss_dssp EEEEEESSHHH--HHHHHHHHHHHHHTT-EEEEEET
T ss_pred CEEEEcCChhH--HHHHHHHHHHHhccCCeEEEeec
Confidence 57889999874 23456788999999999987653
No 235
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=27.23 E-value=73 Score=31.79 Aligned_cols=74 Identities=14% Similarity=0.179 Sum_probs=40.8
Q ss_pred hHHHHHHHhCCcEEeecccc-chHhHHHH--HHHhCcEEEecccccCCcccHHHHHHHHHHHHcC------CccHHHHHH
Q 042362 193 GSTVEGIMYGVPIIAVPMVL-DQLFNAKM--VADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ------EEGQQIKRK 263 (294)
Q Consensus 193 ~s~~Eal~~GvP~i~~P~~~-DQ~~na~~--v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~------~~~~~~r~~ 263 (294)
-|-+||+++|||.|+-=+.+ -++.+-.. -...|+-+.-. ..-+.++..+.|.+.|.+ .+-..+|.+
T Consensus 484 YTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR-----~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ 558 (633)
T PF05693_consen 484 YTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDR-----RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNR 558 (633)
T ss_dssp HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-S-----SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHH
T ss_pred CChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeC-----CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 57899999999999976532 33322211 12346666543 334566666666665531 112357777
Q ss_pred HHHHHHHH
Q 042362 264 AKELSESI 271 (294)
Q Consensus 264 a~~l~~~~ 271 (294)
++++++++
T Consensus 559 ae~LS~~~ 566 (633)
T PF05693_consen 559 AERLSDLA 566 (633)
T ss_dssp HHHHGGGG
T ss_pred HHHHHHhC
Confidence 77777665
No 236
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=27.16 E-value=96 Score=30.51 Aligned_cols=27 Identities=7% Similarity=0.223 Sum_probs=21.4
Q ss_pred cceEEecCCc------hHHHHHHHhCCcEEeec
Q 042362 183 IGGFVSHCGW------GSTVEGIMYGVPIIAVP 209 (294)
Q Consensus 183 v~~~ItHgG~------~s~~Eal~~GvP~i~~P 209 (294)
.+++++|.|- +.+.+|...++|+|++-
T Consensus 77 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 77 PAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4447877764 57889999999999984
No 237
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=26.27 E-value=42 Score=22.97 Aligned_cols=23 Identities=39% Similarity=0.595 Sum_probs=17.4
Q ss_pred CCCcccccCCCCcceEEecCCch
Q 042362 171 WAPQAKILGHGSIGGFVSHCGWG 193 (294)
Q Consensus 171 ~~pq~~lL~~~~v~~~ItHgG~~ 193 (294)
-.|..-+|+..+..++||+.|.|
T Consensus 24 p~P~~n~LsNg~y~~mvt~~G~G 46 (66)
T PF06204_consen 24 PAPWVNVLSNGSYGVMVTNSGSG 46 (66)
T ss_dssp SS--EEEE-SSSEEEEEETTSBE
T ss_pred CCCEEEEeeCCcEEEEEcCCCce
Confidence 35777899999999999999976
No 238
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=25.87 E-value=5.6e+02 Score=24.04 Aligned_cols=93 Identities=15% Similarity=0.097 Sum_probs=55.5
Q ss_pred CCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChh-h--HHhhhcCCCCcEEecCCCcc---cccCCCCcceEE
Q 042362 114 LSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQS-F--SKEIQGNNKGMVVQGWAPQA---KILGHGSIGGFV 187 (294)
Q Consensus 114 ~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~-~--~~~~~~~~~~v~v~~~~pq~---~lL~~~~v~~~I 187 (294)
-....+..+++++++.+.++...+...... ..+...++.. . ........-.+.+.+|+||. .+|-.+++ =+
T Consensus 192 Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~-~~~~~~~~~~~~~~g~~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--Nf 268 (374)
T PF10093_consen 192 YENAALASLLDAWAASPKPVHLLVPEGRAL-NSLAAWLGDALLQAGDSWQRGNLTLHVLPFVPQDDYDRLLWACDF--NF 268 (374)
T ss_pred CCchHHHHHHHHHhcCCCCeEEEecCCccH-HHHHHHhccccccCccccccCCeEEEECCCCCHHHHHHHHHhCcc--ce
Confidence 345668899999998888877666532111 0111111100 0 00000023346677999997 57777665 33
Q ss_pred ecCCchHHHHHHHhCCcEEeecc
Q 042362 188 SHCGWGSTVEGIMYGVPIIAVPM 210 (294)
Q Consensus 188 tHgG~~s~~Eal~~GvP~i~~P~ 210 (294)
-. |--|+.-|..+|+|+|=-.+
T Consensus 269 VR-GEDSfVRAqwAgkPFvWhIY 290 (374)
T PF10093_consen 269 VR-GEDSFVRAQWAGKPFVWHIY 290 (374)
T ss_pred Ee-cchHHHHHHHhCCCceEecC
Confidence 33 78899999999999986444
No 239
>PRK11914 diacylglycerol kinase; Reviewed
Probab=25.73 E-value=1.7e+02 Score=26.15 Aligned_cols=27 Identities=19% Similarity=0.323 Sum_probs=22.5
Q ss_pred ceEEecCCchHHHHHHH----hCCcEEeecc
Q 042362 184 GGFVSHCGWGSTVEGIM----YGVPIIAVPM 210 (294)
Q Consensus 184 ~~~ItHgG~~s~~Eal~----~GvP~i~~P~ 210 (294)
+.+|.-||-||+.|++. .++|+-++|.
T Consensus 66 d~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 66 DALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred CEEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 45899999999998884 4689999996
No 240
>PRK06932 glycerate dehydrogenase; Provisional
Probab=25.52 E-value=2e+02 Score=26.05 Aligned_cols=100 Identities=17% Similarity=0.240 Sum_probs=53.5
Q ss_pred CceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCC
Q 042362 101 SSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGH 180 (294)
Q Consensus 101 ~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~ 180 (294)
+.+..|.+|+++ +++++.+...|.+++.. ... . . . .. ..++.+-.++|+.
T Consensus 148 ktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~--~---------~--------~--~~-~~~~~~l~ell~~ 197 (314)
T PRK06932 148 STLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHK--G---------A--------S--VC-REGYTPFEEVLKQ 197 (314)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCC--c---------c--------c--cc-ccccCCHHHHHHh
Confidence 457788888887 34555555677777643 110 0 0 0 00 0134556678888
Q ss_pred CCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcE-EEecccccCCcccHHHHHHHHH
Q 042362 181 GSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVG-LEVPREEINQRVRKKDLARVIK 249 (294)
Q Consensus 181 ~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G-~~l~~~~~~~~~t~~~l~~ai~ 249 (294)
+++ ++.|+-.+.-. ....|+..+...+=| +.++. .|...++.++|.++++
T Consensus 198 sDi--v~l~~Plt~~T----------------~~li~~~~l~~mk~ga~lIN~-aRG~~Vde~AL~~aL~ 248 (314)
T PRK06932 198 ADI--VTLHCPLTETT----------------QNLINAETLALMKPTAFLINT-GRGPLVDEQALLDALE 248 (314)
T ss_pred CCE--EEEcCCCChHH----------------hcccCHHHHHhCCCCeEEEEC-CCccccCHHHHHHHHH
Confidence 776 77776543222 234566666665333 22321 1234556666666665
No 241
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. 6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.
Probab=25.48 E-value=1.4e+02 Score=27.83 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=23.8
Q ss_pred hHHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEE
Q 042362 90 KIMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWV 136 (294)
Q Consensus 90 ~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~ 136 (294)
++.+++...+ +.+++|+ |.... ....+..+.+.|.+.+..+.+.
T Consensus 13 ~l~~~~~~~g-~~~livt-~~~~~-~~~~~~~v~~~L~~~~~~~~~f 56 (386)
T cd08191 13 QLPRLAARLG-SRALIVT-DERMA-GTPVFAELVQALAAAGVEVEVF 56 (386)
T ss_pred HHHHHHHHcC-CeEEEEE-Ccchh-hcchHHHHHHHHHHcCCeEEEE
Confidence 3444555443 3365666 43322 1345666777787777766543
No 242
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=25.43 E-value=3.7e+02 Score=21.83 Aligned_cols=134 Identities=19% Similarity=0.237 Sum_probs=67.8
Q ss_pred EEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCCCCcce
Q 042362 106 VSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGHGSIGG 185 (294)
Q Consensus 106 vs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~~~v~~ 185 (294)
|-+||.. +...++++...|+..|.++-..+-+. ...|+.+.+ |+-+- ....+++
T Consensus 3 IimGS~S--D~~~~~~a~~~L~~~gi~~dv~V~Sa--------HRtp~~~~~-------------~~~~a---~~~g~~v 56 (156)
T TIGR01162 3 IIMGSDS--DLPTMKKAADILEEFGIPYELRVVSA--------HRTPELMLE-------------YAKEA---EERGIKV 56 (156)
T ss_pred EEECcHh--hHHHHHHHHHHHHHcCCCeEEEEECc--------ccCHHHHHH-------------HHHHH---HHCCCeE
Confidence 4556654 45677888888888887654433221 113443222 11110 0011344
Q ss_pred EEecCCchHHHHHHHh---CCcEEeeccccch--HhHH-HHHHH--hC--cEEEecccccCCcccHHHHHHHHHHHHcCC
Q 042362 186 FVSHCGWGSTVEGIMY---GVPIIAVPMVLDQ--LFNA-KMVAD--IG--VGLEVPREEINQRVRKKDLARVIKQVVEQE 255 (294)
Q Consensus 186 ~ItHgG~~s~~Eal~~---GvP~i~~P~~~DQ--~~na-~~v~~--~G--~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~ 255 (294)
||+-+|...-+-.+.+ -+|+|.+|....- -.++ .-+.+ .| ++...- ++..++.-+...|-.+ .
T Consensus 57 iIa~AG~aa~Lpgvva~~t~~PVIgvP~~~~~l~G~daLlS~vqmP~gvpvatv~I----~~~~nAa~~AaqIl~~-~-- 129 (156)
T TIGR01162 57 IIAGAGGAAHLPGMVAALTPLPVIGVPVPSKALSGLDSLLSIVQMPSGVPVATVAI----GNAGNAALLAAQILGI-K-- 129 (156)
T ss_pred EEEeCCccchhHHHHHhccCCCEEEecCCccCCCCHHHHHHHhcCCCCCeeEEEEc----CChhHHHHHHHHHHcC-C--
Confidence 8888887555555544 4899999974321 1111 11223 25 333322 1233444444433222 2
Q ss_pred ccHHHHHHHHHHHHHHHh
Q 042362 256 EGQQIKRKAKELSESIKK 273 (294)
Q Consensus 256 ~~~~~r~~a~~l~~~~~~ 273 (294)
+++++++.+..++.+..
T Consensus 130 -d~~l~~kl~~~r~~~~~ 146 (156)
T TIGR01162 130 -DPELAEKLKEYRENQKE 146 (156)
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 57788888877776643
No 243
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=25.26 E-value=3.2e+02 Score=23.67 Aligned_cols=44 Identities=11% Similarity=0.166 Sum_probs=28.1
Q ss_pred HHHhhccCCCCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEE
Q 042362 91 IMDWLSRKEPSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWV 136 (294)
Q Consensus 91 ~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~ 136 (294)
+.+++.. .+.|+||-.-|........+....+++.+.|+.+...
T Consensus 24 ~~~~~~~--~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l 67 (233)
T PRK05282 24 IAELLAG--RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGI 67 (233)
T ss_pred HHHHHcC--CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 3445542 2348888887765433555777888888888775443
No 244
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=24.92 E-value=89 Score=24.32 Aligned_cols=28 Identities=18% Similarity=0.240 Sum_probs=20.2
Q ss_pred EEEEeCCCccCCHHHHHHHHHHHhcCCC
Q 042362 104 VYVSFGSEYFLSQEEMNEIASGLLLSEV 131 (294)
Q Consensus 104 Vyvs~GS~~~~~~~~~~~l~~al~~~~~ 131 (294)
+|+++||......+.++..+..|.+...
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~~ 28 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALPV 28 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCCc
Confidence 5899999886555667777777766543
No 245
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=24.50 E-value=4.4e+02 Score=23.54 Aligned_cols=70 Identities=17% Similarity=0.112 Sum_probs=40.6
Q ss_pred ecCCchHHHHHHHhCCcEEeecccc--chHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHH
Q 042362 188 SHCGWGSTVEGIMYGVPIIAVPMVL--DQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAK 265 (294)
Q Consensus 188 tHgG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~ 265 (294)
.+.|.+.+..|+.+|+...++-++. +...-+..+.+ ..+.+. ..-|.++|.+.+.++-. .-|.+..+
T Consensus 200 ~~rG~~~~~~ai~~G~~~tG~TvH~v~~~~D~G~Ii~Q--~~v~I~-----~~dt~~~L~~r~~~~E~----~~~~~ai~ 268 (286)
T PRK13011 200 GFKGAKPYHQAYERGVKLIGATAHYVTDDLDEGPIIEQ--DVERVD-----HAYSPEDLVAKGRDVEC----LTLARAVK 268 (286)
T ss_pred CCCCCcHHHHHHHCCCCeEEEEEEEEcCCCcCCCcEEE--EEEEcC-----CCCCHHHHHHHHHHHHH----HHHHHHHH
Confidence 3468899999999999988876542 11111111111 112222 23478899888877432 45555555
Q ss_pred HHH
Q 042362 266 ELS 268 (294)
Q Consensus 266 ~l~ 268 (294)
.+.
T Consensus 269 ~~~ 271 (286)
T PRK13011 269 AHI 271 (286)
T ss_pred HHH
Confidence 443
No 246
>PLN02727 NAD kinase
Probab=24.44 E-value=1.9e+02 Score=30.44 Aligned_cols=53 Identities=13% Similarity=0.181 Sum_probs=38.9
Q ss_pred CcceEEecCCchHHHHHHHh----CCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHHHHHcC
Q 042362 182 SIGGFVSHCGWGSTVEGIMY----GVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIKQVVEQ 254 (294)
Q Consensus 182 ~v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~ 254 (294)
.++++|+=||-||++.|+.. ++|++.+-+. .+|... .+..+++.++|.+++.+
T Consensus 743 ~~DLVIvLGGDGTlLrAar~~~~~~iPILGINlG-------------rLGFLT-------di~~ee~~~~L~~Il~G 799 (986)
T PLN02727 743 RVDFVACLGGDGVILHASNLFRGAVPPVVSFNLG-------------SLGFLT-------SHYFEDFRQDLRQVIHG 799 (986)
T ss_pred CCCEEEEECCcHHHHHHHHHhcCCCCCEEEEeCC-------------Cccccc-------cCCHHHHHHHHHHHHcC
Confidence 46679999999999999874 6788877442 233322 35678888999988874
No 247
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=24.36 E-value=2.3e+02 Score=20.17 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=23.4
Q ss_pred eEEEEeCCCcc-CCHHHHHHHHHHHhcC--CCcEEEEE
Q 042362 103 VVYVSFGSEYF-LSQEEMNEIASGLLLS--EVSFIWVV 137 (294)
Q Consensus 103 vVyvs~GS~~~-~~~~~~~~l~~al~~~--~~~~i~~~ 137 (294)
+|+++.||... .....+..+++.+.+. +..+.+.+
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~ 39 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGF 39 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEE
Confidence 78999999865 4456777777777542 34454444
No 248
>PRK13337 putative lipid kinase; Reviewed
Probab=24.04 E-value=3.4e+02 Score=24.24 Aligned_cols=28 Identities=14% Similarity=0.095 Sum_probs=22.2
Q ss_pred cceEEecCCchHHHHHHHh------CCcEEeecc
Q 042362 183 IGGFVSHCGWGSTVEGIMY------GVPIIAVPM 210 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~------GvP~i~~P~ 210 (294)
.+.+|..||-||+.|++.. ..|+-++|.
T Consensus 58 ~d~vvv~GGDGTl~~vv~gl~~~~~~~~lgiiP~ 91 (304)
T PRK13337 58 FDLVIAAGGDGTLNEVVNGIAEKENRPKLGIIPV 91 (304)
T ss_pred CCEEEEEcCCCHHHHHHHHHhhCCCCCcEEEECC
Confidence 3459999999999998862 347888996
No 249
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=23.51 E-value=2.5e+02 Score=24.73 Aligned_cols=28 Identities=18% Similarity=0.408 Sum_probs=20.5
Q ss_pred cceEEecCCchHHHHHHHh-----CCcEEe-ecc
Q 042362 183 IGGFVSHCGWGSTVEGIMY-----GVPIIA-VPM 210 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~-----GvP~i~-~P~ 210 (294)
.+++|.-||-||+.|++.. ..|.++ +|.
T Consensus 58 ~d~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 58 VDTVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred CCEEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 4459999999999996643 345554 896
No 250
>COG1691 NCAIR mutase (PurE)-related proteins [General function prediction only]
Probab=23.31 E-value=2.3e+02 Score=24.63 Aligned_cols=117 Identities=20% Similarity=0.173 Sum_probs=68.2
Q ss_pred eE-EEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCC--cccccC
Q 042362 103 VV-YVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAP--QAKILG 179 (294)
Q Consensus 103 vV-yvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~p--q~~lL~ 179 (294)
+| .+|-||.--+ ..++....++.+|..+.-.+.-.- .++ +..++ +.....
T Consensus 119 ~vgvlsAGTSDlP---vAeEa~~tae~lG~ev~~~~DvGV----------------------AGi--HRLl~~l~r~~~~ 171 (254)
T COG1691 119 KVGVLSAGTSDLP---VAEEAAVTAEELGVEVQKVYDVGV----------------------AGI--HRLLSALKRLKIE 171 (254)
T ss_pred eEEEEecCCCCcc---hHHHHHHHHHHhCceEEEEEeecc----------------------chH--HhhhhHHHHHHhh
Confidence 55 8899886543 344444555556776655543210 112 13334 334444
Q ss_pred CCCcceEEecCCchHHHHHHHhC---CcEEeeccccchHh----HHHHH---H--HhCcEEEecccccCCcccHHHHHHH
Q 042362 180 HGSIGGFVSHCGWGSTVEGIMYG---VPIIAVPMVLDQLF----NAKMV---A--DIGVGLEVPREEINQRVRKKDLARV 247 (294)
Q Consensus 180 ~~~v~~~ItHgG~~s~~Eal~~G---vP~i~~P~~~DQ~~----na~~v---~--~~G~G~~l~~~~~~~~~t~~~l~~a 247 (294)
. .++.|--+|+-..+-++.+| +|+|.+|...-.-. -+..+ . .-|+|+.=- +..+-+..++..
T Consensus 172 ~--~~~lIVvAGMEGaLPsvvagLvD~PVIavPTsVGYG~g~gGiaaLltMLqSCspGv~VVNI----dNGfGAa~~A~~ 245 (254)
T COG1691 172 D--ADVLIVVAGMEGALPSVVAGLVDVPVIAVPTSVGYGAGGGGIAALLTMLQSCSPGVGVVNI----DNGFGAAVLAVQ 245 (254)
T ss_pred C--CCeEEEEcccccchHHHHHhccCCCeEecccccccCcCCccHHHHHHHHHhcCCCeEEEEc----cCchHHHHHHHH
Confidence 4 44489999998888888877 89999996332211 22222 2 237777654 456777777766
Q ss_pred HHHHH
Q 042362 248 IKQVV 252 (294)
Q Consensus 248 i~~vl 252 (294)
|.+.+
T Consensus 246 I~r~~ 250 (254)
T COG1691 246 ILRRI 250 (254)
T ss_pred HHHHH
Confidence 66655
No 251
>PHA02754 hypothetical protein; Provisional
Probab=23.10 E-value=1.6e+02 Score=19.58 Aligned_cols=29 Identities=17% Similarity=0.470 Sum_probs=21.0
Q ss_pred cHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC
Q 042362 240 RKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG 275 (294)
Q Consensus 240 t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~ 275 (294)
++++|.++| . +..+++.++++++.+.+.|
T Consensus 3 kAeEi~k~i----~---eK~Fke~MRelkD~LSe~G 31 (67)
T PHA02754 3 KAEEIPKAI----M---EKDFKEAMRELKDILSEAG 31 (67)
T ss_pred cHHHHHHHH----H---HhHHHHHHHHHHHHHhhCc
Confidence 455655544 3 3679999999999988766
No 252
>PRK08051 fre FMN reductase; Validated
Probab=23.08 E-value=1.6e+02 Score=25.02 Aligned_cols=39 Identities=8% Similarity=0.152 Sum_probs=20.7
Q ss_pred CCceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEe
Q 042362 100 PSSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVR 138 (294)
Q Consensus 100 ~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~ 138 (294)
.+++|+|+.||-..+-...++.++..-....+.++|..+
T Consensus 102 ~~~~vliagG~GiaP~~~~l~~~~~~~~~~~v~l~~g~r 140 (232)
T PRK08051 102 ERPLLLIAGGTGFSYARSILLTALAQGPNRPITLYWGGR 140 (232)
T ss_pred CCcEEEEecCcCcchHHHHHHHHHHhCCCCcEEEEEEec
Confidence 356999999997753333333333221112334555544
No 253
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.95 E-value=1e+02 Score=27.91 Aligned_cols=28 Identities=21% Similarity=0.305 Sum_probs=23.4
Q ss_pred cceEEecCCchHHHHHHHh----CCcEEeecc
Q 042362 183 IGGFVSHCGWGSTVEGIMY----GVPIIAVPM 210 (294)
Q Consensus 183 v~~~ItHgG~~s~~Eal~~----GvP~i~~P~ 210 (294)
.+++|+-||-||+++++.. ++|++.+..
T Consensus 58 ~d~vi~~GGDGT~l~~~~~~~~~~~pv~gin~ 89 (305)
T PRK02645 58 IDLAIVLGGDGTVLAAARHLAPHDIPILSVNV 89 (305)
T ss_pred cCEEEEECCcHHHHHHHHHhccCCCCEEEEec
Confidence 4559999999999999874 789888765
No 254
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=22.90 E-value=2.5e+02 Score=22.44 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=23.9
Q ss_pred eEEEEeCCCccCC--------HHHHHHHHHHHhcCCCcEEEEE
Q 042362 103 VVYVSFGSEYFLS--------QEEMNEIASGLLLSEVSFIWVV 137 (294)
Q Consensus 103 vVyvs~GS~~~~~--------~~~~~~l~~al~~~~~~~i~~~ 137 (294)
+|+|.+|+.-... .+.+..+++.+...+.+++|..
T Consensus 70 ~vii~~G~ND~~~~~~~~~~~~~~~~~~i~~i~~~~~~vil~~ 112 (185)
T cd01832 70 LVTLLAGGNDILRPGTDPDTYRADLEEAVRRLRAAGARVVVFT 112 (185)
T ss_pred EEEEeccccccccCCCCHHHHHHHHHHHHHHHHhCCCEEEEec
Confidence 8999999975432 3445667777766677777764
No 255
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=22.77 E-value=4.1e+02 Score=22.89 Aligned_cols=76 Identities=16% Similarity=0.305 Sum_probs=49.1
Q ss_pred CCCcchHHHHHHHhhccccEEEEcCchhhcHHHHHHHhhhcC-CCeEeeCCCCCCCCCCCCCCchhHHHhhccCCCCceE
Q 042362 26 VNGTENKDRFLKAIDLSCKLVLIKTSRDIESKYLDYFSYITK-KETIPVGPLVQEPVYTDNNDDTKIMDWLSRKEPSSVV 104 (294)
Q Consensus 26 ~~g~~~~~~~~~~~~~~~~~~lint~~ele~~~~~~~~~~~~-~~~~~VGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vV 104 (294)
-+|.--...+.+++..-++.+=+.--..+-+.++..++..+| -++.++|.+... .+.+.+|++.. ++
T Consensus 116 iPG~~TpsEi~~A~~~Ga~~vKlFPA~~~G~~~ikal~~p~p~i~~~ptGGV~~~--------~~n~~~yl~aG----a~ 183 (222)
T PRK07114 116 SPGCGSLSEIGYAEELGCEIVKLFPGSVYGPGFVKAIKGPMPWTKIMPTGGVEPT--------EENLKKWFGAG----VT 183 (222)
T ss_pred eCCCCCHHHHHHHHHCCCCEEEECcccccCHHHHHHHhccCCCCeEEeCCCCCcc--------hhcHHHHHhCC----CE
Confidence 345446677777777545554332212455678888887776 457888887642 12478899843 88
Q ss_pred EEEeCCCcc
Q 042362 105 YVSFGSEYF 113 (294)
Q Consensus 105 yvs~GS~~~ 113 (294)
.|..||...
T Consensus 184 avg~Gs~L~ 192 (222)
T PRK07114 184 CVGMGSKLI 192 (222)
T ss_pred EEEEChhhc
Confidence 899999764
No 256
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=22.74 E-value=4.3e+02 Score=25.67 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=42.4
Q ss_pred hCcEEEecccccCCcccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHhh
Q 042362 224 IGVGLEVPREEINQRVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 289 (294)
Q Consensus 224 ~G~G~~l~~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~~~ 289 (294)
++-++.+++ .+.++++++|.+.|+-+ ..+-+++.+++.+.++... ..-++.+++.|...
T Consensus 395 L~~AllVNP------~d~~~~A~Ai~~AL~Mp-~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~ 454 (474)
T PRK10117 395 LTSALIVNP------YDRDEVAAALDRALTMP-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (474)
T ss_pred hCCCeEECC------CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Confidence 344667754 67899999999998632 2456777777777777777 66677888877664
No 257
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=22.73 E-value=1.8e+02 Score=26.55 Aligned_cols=63 Identities=19% Similarity=0.284 Sum_probs=41.3
Q ss_pred cCCCcccccCCCCcceEEecCCchHHHHHHHhCCcEEeeccccchHhHHHHHHHhCcEEEecccccCCcccHHHHHHHHH
Q 042362 170 GWAPQAKILGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPREEINQRVRKKDLARVIK 249 (294)
Q Consensus 170 ~~~pq~~lL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~t~~~l~~ai~ 249 (294)
.|++..++|..+++ ++-||..+-- ...-.|++.+...+-|..+--..|...++.+++.++++
T Consensus 190 ~y~~l~ell~~sDi--i~l~~Plt~~----------------T~hLin~~~l~~mk~ga~lVNtaRG~~VDe~ALi~AL~ 251 (324)
T COG1052 190 RYVDLDELLAESDI--ISLHCPLTPE----------------TRHLINAEELAKMKPGAILVNTARGGLVDEQALIDALK 251 (324)
T ss_pred eeccHHHHHHhCCE--EEEeCCCChH----------------HhhhcCHHHHHhCCCCeEEEECCCccccCHHHHHHHHH
Confidence 56778889998886 7777654311 22355888888876655553223346678888888877
Q ss_pred H
Q 042362 250 Q 250 (294)
Q Consensus 250 ~ 250 (294)
+
T Consensus 252 ~ 252 (324)
T COG1052 252 S 252 (324)
T ss_pred h
Confidence 4
No 258
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=22.55 E-value=1.5e+02 Score=27.54 Aligned_cols=10 Identities=40% Similarity=0.813 Sum_probs=8.7
Q ss_pred CCcEEeeccc
Q 042362 202 GVPIIAVPMV 211 (294)
Q Consensus 202 GvP~i~~P~~ 211 (294)
++|+|++|..
T Consensus 125 ~~p~i~IPTT 134 (376)
T cd08193 125 RLPLILVPTT 134 (376)
T ss_pred CCCEEEeCCC
Confidence 7899999975
No 259
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=22.07 E-value=1.5e+02 Score=27.92 Aligned_cols=10 Identities=40% Similarity=0.923 Sum_probs=8.2
Q ss_pred CCcEEeeccc
Q 042362 202 GVPIIAVPMV 211 (294)
Q Consensus 202 GvP~i~~P~~ 211 (294)
.+|+|++|..
T Consensus 148 ~~P~iaIPTt 157 (395)
T PRK15454 148 RLPLIAIPTT 157 (395)
T ss_pred CCCEEEECCC
Confidence 4799999974
No 260
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=22.06 E-value=2.9e+02 Score=24.46 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=24.9
Q ss_pred ccccCCCCcceEEecCCch-----HHHHHHHhCCcEEeeccc
Q 042362 175 AKILGHGSIGGFVSHCGWG-----STVEGIMYGVPIIAVPMV 211 (294)
Q Consensus 175 ~~lL~~~~v~~~ItHgG~~-----s~~Eal~~GvP~i~~P~~ 211 (294)
...+...++-++|+|.|.+ .+..|-..|+|+|.+--.
T Consensus 172 ~~~~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~~ 213 (281)
T COG1737 172 LALLTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITDS 213 (281)
T ss_pred HHhCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEcCC
Confidence 3445555666799999963 344555689999988543
No 261
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=22.03 E-value=2.6e+02 Score=27.49 Aligned_cols=27 Identities=15% Similarity=0.295 Sum_probs=21.3
Q ss_pred cceEEecCCc------hHHHHHHHhCCcEEeec
Q 042362 183 IGGFVSHCGW------GSTVEGIMYGVPIIAVP 209 (294)
Q Consensus 183 v~~~ItHgG~------~s~~Eal~~GvP~i~~P 209 (294)
.+++++|.|- +.+.+|...++|+|++-
T Consensus 68 ~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 68 VGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4457778774 56889999999999984
No 262
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=22.00 E-value=4.6e+02 Score=21.65 Aligned_cols=52 Identities=17% Similarity=0.264 Sum_probs=31.4
Q ss_pred CCcEEeeccc----cch---HhHHHHHHHhCcEEEecccc--------cCCcccHHHHHHHHHHHHc
Q 042362 202 GVPIIAVPMV----LDQ---LFNAKMVADIGVGLEVPREE--------INQRVRKKDLARVIKQVVE 253 (294)
Q Consensus 202 GvP~i~~P~~----~DQ---~~na~~v~~~G~G~~l~~~~--------~~~~~t~~~l~~ai~~vl~ 253 (294)
++|++++|-. ... ..|..++.+.|+=+.-+... ..+--+.++|.+.+.+.+.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~~g~la~~~~g~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPKEGLLACGDEGYGALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCccccCCccCCCCCCHHHHHHHHHHHhc
Confidence 8999999952 222 45677777777665544210 0123456777777766553
No 263
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional
Probab=21.79 E-value=1.6e+02 Score=27.46 Aligned_cols=10 Identities=60% Similarity=1.062 Sum_probs=8.5
Q ss_pred CCcEEeeccc
Q 042362 202 GVPIIAVPMV 211 (294)
Q Consensus 202 GvP~i~~P~~ 211 (294)
++|+|++|..
T Consensus 131 ~~p~i~VPTT 140 (382)
T PRK10624 131 SVPIIAIPTT 140 (382)
T ss_pred CCCEEEECCC
Confidence 5899999974
No 264
>PRK10239 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase; Provisional
Probab=21.66 E-value=1.5e+02 Score=24.04 Aligned_cols=27 Identities=26% Similarity=0.294 Sum_probs=20.2
Q ss_pred eEEEEeCCCccCCHHHHHHHHHHHhcC
Q 042362 103 VVYVSFGSEYFLSQEEMNEIASGLLLS 129 (294)
Q Consensus 103 vVyvs~GS~~~~~~~~~~~l~~al~~~ 129 (294)
.||+++||......+.+...+..|.+.
T Consensus 3 ~v~i~lGSN~g~~~~~l~~A~~~L~~~ 29 (159)
T PRK10239 3 VAYIAIGSNLASPLEQVNAALKALGDI 29 (159)
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcC
Confidence 689999999754566677777777654
No 265
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=21.50 E-value=2e+02 Score=20.80 Aligned_cols=17 Identities=12% Similarity=-0.167 Sum_probs=11.7
Q ss_pred HHHHHHHhcCCCcEEEE
Q 042362 120 NEIASGLLLSEVSFIWV 136 (294)
Q Consensus 120 ~~l~~al~~~~~~~i~~ 136 (294)
..+-+.+++.|..++|.
T Consensus 13 ~~~~~~~~~~G~~~~~h 29 (97)
T PF10087_consen 13 RRYKRILEKYGGKLIHH 29 (97)
T ss_pred HHHHHHHHHcCCEEEEE
Confidence 34445556688888888
No 266
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=21.35 E-value=4.5e+02 Score=24.93 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=54.4
Q ss_pred CCCceEEEEe-CCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccc
Q 042362 99 EPSSVVYVSF-GSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKI 177 (294)
Q Consensus 99 ~~~~vVyvs~-GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~l 177 (294)
.+||.|-+|+ |.. ..-+..+.+.|++.|+.+++..-...+... +++-+. .+.---+.+.-... +
T Consensus 183 ~~kp~I~iTmfGvT----Tp~V~~~~~~Le~~G~Ev~VFHAtG~GG~a---------ME~Li~-~G~~~~VlDlTttE-l 247 (403)
T PF06792_consen 183 EDKPLIGITMFGVT----TPCVDAIRERLEEEGYEVLVFHATGTGGRA---------MERLIR-EGQFDGVLDLTTTE-L 247 (403)
T ss_pred CCCcEEEEECCCCc----HHHHHHHHHHHHhcCCeEEEEcCCCCchHH---------HHHHHH-cCCcEEEEECcHHH-H
Confidence 4567776664 333 356777788888889988766443333211 111110 11101122333332 1
Q ss_pred cCCCCcceEEecCCchHHHHHHHhCCcEEeeccccc
Q 042362 178 LGHGSIGGFVSHCGWGSTVEGIMYGVPIIAVPMVLD 213 (294)
Q Consensus 178 L~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~D 213 (294)
-.+ -++ -+..+|-.=+-.|...|+|+|+.|=..|
T Consensus 248 ~d~-l~G-Gv~sagp~Rl~AA~~~GIP~Vvs~GalD 281 (403)
T PF06792_consen 248 ADE-LFG-GVLSAGPDRLEAAARAGIPQVVSPGALD 281 (403)
T ss_pred HHH-HhC-CCCCCCchHHHHHHHcCCCEEEecCccc
Confidence 111 122 3677888889999999999999995333
No 267
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=21.29 E-value=3.2e+02 Score=26.45 Aligned_cols=106 Identities=11% Similarity=0.124 Sum_probs=55.5
Q ss_pred EecCCCcc---cccCCCCcceEEe--cCCchHH-HHHHHhCCc---EEeeccccchHhHHHHHHHhC-cEEEecccccCC
Q 042362 168 VQGWAPQA---KILGHGSIGGFVS--HCGWGST-VEGIMYGVP---IIAVPMVLDQLFNAKMVADIG-VGLEVPREEINQ 237 (294)
Q Consensus 168 v~~~~pq~---~lL~~~~v~~~It--HgG~~s~-~Eal~~GvP---~i~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~~ 237 (294)
+..-+|+. .++..+++ ++|| ..|+|.+ .|.+++-.+ ++++--++ -| ...++ .++.+++
T Consensus 357 ~~~~~~~~~~~aly~~aDv-~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefa----Ga--a~~L~~~al~VNP----- 424 (474)
T PF00982_consen 357 IYRSLSFEELLALYRAADV-ALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFA----GA--AEQLSEAALLVNP----- 424 (474)
T ss_dssp E-S---HHHHHHHHHH-SE-EEE--SSBS--HHHHHHHHHS-TS--EEEEETTB----GG--GGT-TTS-EEE-T-----
T ss_pred EecCCCHHHHHHHHHhhhh-EEecchhhccCCcceEEEEEecCCCCceEeeccC----CH--HHHcCCccEEECC-----
Confidence 33445554 34445666 2333 5788776 477777654 33332211 11 22344 4477754
Q ss_pred cccHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHH
Q 042362 238 RVRKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLL 287 (294)
Q Consensus 238 ~~t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~-~~~~~~~v~~l~ 287 (294)
.+.++++++|.+.|+=. .++-+++.+++.+.+.... ..-++.+++.|+
T Consensus 425 -~d~~~~A~ai~~AL~M~-~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 425 -WDIEEVADAIHEALTMP-PEERKERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp -T-HHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred -CChHHHHHHHHHHHcCC-HHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 57899999999998621 2456677777777777777 666777777775
No 268
>smart00096 UTG Uteroglobin.
Probab=20.90 E-value=3e+02 Score=19.07 Aligned_cols=44 Identities=11% Similarity=0.227 Sum_probs=31.4
Q ss_pred cHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcC---cHHHHHHHHHH
Q 042362 240 RKKDLARVIKQVVEQEEGQQIKRKAKELSESIKKKG---DDEEINVVEKL 286 (294)
Q Consensus 240 t~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~~~---~~~~~~~v~~l 286 (294)
|.+.....+...-. ++++.+++.++++..-.-+ ...+..+++.+
T Consensus 17 t~~~Y~~~l~~y~~---~~~~~ea~~~lK~cvD~L~~~~k~~i~~ll~kI 63 (69)
T smart00096 17 TPSSYEASLKQFKP---DPDMLEAGRQLKKLVDTLPQETRENILKLTEKI 63 (69)
T ss_pred CHHHHHHHHHhcCC---CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 67778888887766 6889999999998887655 33344444444
No 269
>cd03363 TOPRIM_TopoIA_TopoI TOPRIM_TopoIA_TopoI: The topoisomerase-primase (TORPIM) domain found in members of the type IA family of DNA topoisomerases (Topo IA) similar to Escherichia coli DNA topoisomerase I. Type IA DNA topoisomerases remove (relax) negative supercoils in the DNA by: cleaving one strand of the DNA duplex, covalently linking to the 5' phosphoryl end of the DNA break and, allowing the other strand of the duplex to pass through the gap. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). For topoisomerases the conserved glutamate is believed to act as a general base in strand joining and, as a general acid in strand cleavage. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=20.62 E-value=1.3e+02 Score=23.15 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=23.7
Q ss_pred chHHHHHHHhhccccEEEEcCchhhcHHHHHH
Q 042362 30 ENKDRFLKAIDLSCKLVLIKTSRDIESKYLDY 61 (294)
Q Consensus 30 ~~~~~~~~~~~~~~~~~lint~~ele~~~~~~ 61 (294)
..+..+.+.+.+ +|-+++.|.+..|++.+.+
T Consensus 61 ~~~~~ik~l~~~-~~eiiiAtD~drEGe~i~~ 91 (123)
T cd03363 61 KVVKELKKLAKK-ADEIYLATDPDREGEAIAW 91 (123)
T ss_pred HHHHHHHHHHhc-CCEEEEcCCCCcchHHHHH
Confidence 456665666655 9999999999999987653
No 270
>PF01995 DUF128: Domain of unknown function DUF128; InterPro: IPR002846 These archaebacterial proteins have no known function. The domain is found duplicated in some sequences.; PDB: 3NEK_B.
Probab=20.31 E-value=5e+02 Score=22.62 Aligned_cols=80 Identities=21% Similarity=0.215 Sum_probs=45.2
Q ss_pred CceEEEEeCCCccCCHHHHHHHHHHHhcCCCcEEEEEeecCCCccchhccCChhhHHhhhcCCCCcEEecCCCcccccCC
Q 042362 101 SSVVYVSFGSEYFLSQEEMNEIASGLLLSEVSFIWVVRFHSEGKFTIEEALPQSFSKEIQGNNKGMVVQGWAPQAKILGH 180 (294)
Q Consensus 101 ~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~v~~~~pq~~lL~~ 180 (294)
...|+.++=.......+.+.++++.|++.+...+..++.+... --++-+.
T Consensus 145 ~G~ilAn~ReiP~~a~e~~~~il~~l~~~g~~Gil~iG~p~~~-------------------vlgvpv~----------- 194 (236)
T PF01995_consen 145 EGKILANFREIPMSAREKAEEILEKLEKAGFSGILEIGEPNEP-------------------VLGVPVE----------- 194 (236)
T ss_dssp SSEEEEEEEEEETTTHHHHHHHHHHH---T-TTEEEE--TT---------------------BTTB--------------
T ss_pred CceEeeeeecCchhHHHHHHHHHHHhhhcccceeEEeCCCCCc-------------------ccCCccC-----------
Confidence 3477777766666678899999999999898877777642110 0022221
Q ss_pred CCcceEEecCCchHHHHHHHhCCcEEeecc
Q 042362 181 GSIGGFVSHCGWGSTVEGIMYGVPIIAVPM 210 (294)
Q Consensus 181 ~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~ 210 (294)
+.--+++.-||.|-+.-+..+|+|+-+-+.
T Consensus 195 ~~~~Giv~~GG~Npia~~~E~Gi~i~~~~~ 224 (236)
T PF01995_consen 195 PGMVGIVVIGGLNPIAAAVEAGIPIEIKAM 224 (236)
T ss_dssp TTEEEEEEE-TTHHHHHHHHTT---EEEEE
T ss_pred CCeEEEEEEecCcHHHHHHHcCCeeEeeeh
Confidence 112236777999999999999999876654
No 271
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=20.17 E-value=1.1e+02 Score=23.37 Aligned_cols=29 Identities=14% Similarity=0.102 Sum_probs=22.0
Q ss_pred ceEEecCCchHHHHHHHh----C-----CcEEeecccc
Q 042362 184 GGFVSHCGWGSTVEGIMY----G-----VPIIAVPMVL 212 (294)
Q Consensus 184 ~~~ItHgG~~s~~Eal~~----G-----vP~i~~P~~~ 212 (294)
+.+|.-||-||+.|.+-. . .|+.++|...
T Consensus 51 d~vvv~GGDGTi~~vvn~l~~~~~~~~~~plgiiP~GT 88 (124)
T smart00046 51 DRVLVCGGDGTVGWVLNALDKRELPLPEPPVAVLPLGT 88 (124)
T ss_pred CEEEEEccccHHHHHHHHHHhcccccCCCcEEEeCCCC
Confidence 458999999999998752 2 5777888744
No 272
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=20.05 E-value=2.2e+02 Score=29.45 Aligned_cols=73 Identities=18% Similarity=0.328 Sum_probs=43.2
Q ss_pred cCCCCcceEEe-----cCCchHHHHHHHhCCcEEeecc-ccc---hHhHHHHHHHh-----CcEEEecccc----cCCcc
Q 042362 178 LGHGSIGGFVS-----HCGWGSTVEGIMYGVPIIAVPM-VLD---QLFNAKMVADI-----GVGLEVPREE----INQRV 239 (294)
Q Consensus 178 L~~~~v~~~It-----HgG~~s~~Eal~~GvP~i~~P~-~~D---Q~~na~~v~~~-----G~G~~l~~~~----~~~~~ 239 (294)
-+|.++ ||- ||||-.+.-+++.|.-++.+|= ..+ ...-+..+.+. +.++.+-... .....
T Consensus 185 ~Sh~R~--fVVEvMGR~~G~LAl~aglA~gAd~ilIPE~p~~~~~~~~i~~~l~~~~~~gk~~~iIVVaEGa~d~~g~~i 262 (762)
T cd00764 185 QSHQRT--FVLEVMGRHCGYLALVSGLATGADWIFIPERPPEDGWEDQMCRRLSEHRSRGKRLNIIIVAEGAIDDQLKPI 262 (762)
T ss_pred HhcCCE--EEEEECCCCchHHHHHHHhccCCCEEEecCCCCchhHHHHHHHHHHHHHhcCCCcEEEEEeCCCccccCCCc
Confidence 345554 664 9999999999999988999993 344 23334444432 5566553200 01224
Q ss_pred cHHHHHHHHHHHH
Q 042362 240 RKKDLARVIKQVV 252 (294)
Q Consensus 240 t~~~l~~ai~~vl 252 (294)
+.+.|.+.|.+-+
T Consensus 263 ~~~~l~~~l~~~~ 275 (762)
T cd00764 263 TSEDVKDLVVERL 275 (762)
T ss_pred cHHHHHHHHHHhc
Confidence 4556666665543
Done!