BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042371
(400 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 178/313 (56%), Gaps = 10/313 (3%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVH-EGKLEE 125
+ + K F+ +EL A+D+F+ ILG+GG G VYKG LADG +VAVK+ K +G +
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 126 FINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE-EFPLTWEMR 184
F EV ++S HRN+++L G C+ LLVY +++NG++ L ++ E + PL W R
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 185 LRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT 244
RIA A L+YLH I HRD+K+ NILL+E++ A V DFG +K + HV
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 245 KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILT--GSKEATGLAAYFI 302
V+GT G++ PEY +G+ ++K+DV+ +GV+L+EL+TGQ+ L + + L +
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 303 LSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMEL------E 356
++E +L +D + + EE+ + +A C + RP M EV L E
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 321
Query: 357 RIQALQKDINVKQ 369
R + QK+ +Q
Sbjct: 322 RWEEWQKEEMFRQ 334
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 170/291 (58%), Gaps = 5/291 (1%)
Query: 77 ELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQI 136
+L++AT++F+ ++G G G VYKG+L DG VA+K+ +EEF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQN-EEFPLTWEMRLRIATEVAGSL 195
H ++V L+G C E +L+Y+++ NG L ++L+ + ++WE RL I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLD 254
YLH+ A I HRD+KS NILL+E + K+ DFG SK +DQTH+ V+GT GY+D
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFL 314
PEYF G+ T+KSDVYSFGVVL E+L + I+ + +E LA + + S +L +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 315 DDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDI 365
D + + E + A +CL L+ + RP+M +V +LE LQ+ +
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 177/314 (56%), Gaps = 12/314 (3%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVK--KSKIVHEGKLE 124
+ + K F+ +EL A+D+F ILG+GG G VYKG LADG +VAVK K + G+L+
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE-EFPLTWEM 183
F EV ++S HRN+++L G C+ LLVY +++NG++ L ++ E + PL W
Sbjct: 74 -FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 184 RLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT 243
R RIA A L+YLH I HRD+K+ NILL+E++ A V DFG +K + HV
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 244 TKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILT--GSKEATGLAAYF 301
V+G G++ PEY +G+ ++K+DV+ +GV+L+EL+TGQ+ L + + L +
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 302 ILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMEL------ 355
++E +L +D + + EE+ + +A C + RP M EV L
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
Query: 356 ERIQALQKDINVKQ 369
ER + QK+ +Q
Sbjct: 313 ERWEEWQKEEMFRQ 326
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 169/291 (58%), Gaps = 5/291 (1%)
Query: 77 ELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQI 136
+L++AT++F+ ++G G G VYKG+L DG VA+K+ +EEF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQN-EEFPLTWEMRLRIATEVAGSL 195
H ++V L+G C E +L+Y+++ NG L ++L+ + ++WE RL I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLD 254
YLH+ A I HRD+KS NILL+E + K+ DFG SK + QTH+ V+GT GY+D
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFL 314
PEYF G+ T+KSDVYSFGVVL E+L + I+ + +E LA + + S +L +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 315 DDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDI 365
D + + E + A +CL L+ + RP+M +V +LE LQ+ +
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV 320
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 168/306 (54%), Gaps = 24/306 (7%)
Query: 69 RCKLFTTKELDKATDHFNVNRI------LGQGGQGTVYKGMLADGRIVAVKK----SKIV 118
R F+ EL T++F+ I +G+GG G VYKG + + VAVKK I
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT 69
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP 178
E ++F E+ ++++ H N+V+LLG + + LVY ++ NG+L L + P
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFG----TSKF 234
L+W MR +IA A +++LH + HRDIKS NILL+E +TAK++DFG + KF
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 235 IVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEA 294
QT + +++ GT Y+ PE R G+ T KSD+YSFGVVL+E++TG P + +
Sbjct: 187 A---QTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGL-PAVDEHREPQ 241
Query: 295 TGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAME 354
L + EE + D++D + + + + ++A++CL+ +RP +K+V
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 355 LERIQA 360
L+ + A
Sbjct: 301 LQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 167/306 (54%), Gaps = 24/306 (7%)
Query: 69 RCKLFTTKELDKATDHFNVNRI------LGQGGQGTVYKGMLADGRIVAVKK----SKIV 118
R F+ EL T++F+ I +G+GG G VYKG + + VAVKK I
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT 69
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP 178
E ++F E+ ++++ H N+V+LLG + + LVY ++ NG+L L + P
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFG----TSKF 234
L+W MR +IA A +++LH + HRDIKS NILL+E +TAK++DFG + KF
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 235 IVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEA 294
QT + ++ GT Y+ PE R G+ T KSD+YSFGVVL+E++TG P + +
Sbjct: 187 A---QTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGL-PAVDEHREPQ 241
Query: 295 TGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAME 354
L + EE + D++D + + + + ++A++CL+ +RP +K+V
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 355 LERIQA 360
L+ + A
Sbjct: 301 LQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 166/306 (54%), Gaps = 24/306 (7%)
Query: 69 RCKLFTTKELDKATDHFNVNRI------LGQGGQGTVYKGMLADGRIVAVKK----SKIV 118
R F+ EL T++F+ I +G+GG G VYKG + + VAVKK I
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT 63
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP 178
E ++F E+ ++++ H N+V+LLG + + LVY ++ NG+L L + P
Sbjct: 64 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 123
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFG----TSKF 234
L+W MR +IA A +++LH + HRDIKS NILL+E +TAK++DFG + KF
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 235 IVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEA 294
Q + ++ GT Y+ PE R G+ T KSD+YSFGVVL+E++TG P + +
Sbjct: 181 A---QXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGL-PAVDEHREPQ 235
Query: 295 TGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAME 354
L + EE + D++D + + + + ++A++CL+ +RP +K+V
Sbjct: 236 LLLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 294
Query: 355 LERIQA 360
L+ + A
Sbjct: 295 LQEMTA 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 158/306 (51%), Gaps = 24/306 (7%)
Query: 69 RCKLFTTKELDKATDHFNVNRI------LGQGGQGTVYKGMLADGRIVAVKK----SKIV 118
R F+ EL T++F+ I G+GG G VYKG + + VAVKK I
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT 60
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP 178
E ++F E+ + ++ H N+V+LLG + + LVY + NG+L L + P
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFG----TSKF 234
L+W R +IA A +++LH + HRDIKS NILL+E +TAK++DFG + KF
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 235 IVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEA 294
Q +++ GT Y PE R G+ T KSD+YSFGVVL+E++TG P + +
Sbjct: 178 A---QXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGL-PAVDEHREPQ 232
Query: 295 TGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAME 354
L + EE + D++D + + ++A++CL+ +RP +K+V
Sbjct: 233 LLLDIKEEIEDEEKTIEDYIDKKX-NDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQL 291
Query: 355 LERIQA 360
L+ A
Sbjct: 292 LQEXTA 297
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 124/235 (52%), Gaps = 20/235 (8%)
Query: 54 LVLQQQLTSSDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVK 113
L Q + D I C L N+ +G G GTV++ G VAVK
Sbjct: 21 LYFQGAMDGDDMDIPWCDL-------------NIKEKIGAGSFGTVHRAEW-HGSDVAVK 66
Query: 114 --KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH 171
+ H ++ EF+ EV I+ ++ H N+V +G + +V E++S G+L++ LH
Sbjct: 67 ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH 126
Query: 172 DQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGT 231
L RL +A +VA ++YLH+ + PI HR++KS N+L+++KYT KV DFG
Sbjct: 127 KSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185
Query: 232 SKFIVIDQTHVTTK-VQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
S+ T +++K GT ++ PE R +KSDVYSFGV+L EL T Q+P
Sbjct: 186 SRLKA--STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 18/234 (7%)
Query: 54 LVLQQQLTSSDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVK 113
L Q + D I C L N+ +G G GTV++ G VAVK
Sbjct: 21 LYFQGAMDGDDMDIPWCDL-------------NIKEKIGAGSFGTVHRAEW-HGSDVAVK 66
Query: 114 --KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH 171
+ H ++ EF+ EV I+ ++ H N+V +G + +V E++S G+L++ LH
Sbjct: 67 ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH 126
Query: 172 DQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGT 231
L RL +A +VA ++YLH+ + PI HRD+KS N+L+++KYT KV DFG
Sbjct: 127 KSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRDLKSPNLLVDKKYTVKVCDFGL 185
Query: 232 SKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
S+ + + GT ++ PE R +KSDVYSFGV+L EL T Q+P
Sbjct: 186 SR-LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 120/221 (54%), Gaps = 24/221 (10%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIV--HEG------KLEEFINEVVI 132
A + + +G+GG G V+KG L + V KS I+ EG K +EF EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
+S +NH N+VKL G L P +V EF+ G L+ L D+ P+ W ++LR+ ++A
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIA 132
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILL-----NEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
+ Y+ + + PI HRD++S NI L N AKVADFGTS+ H + +
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLL 187
Query: 248 GTFGYLDPEYFRSGQ--FTDKSDVYSFGVVLVELLTGQKPI 286
G F ++ PE + + +T+K+D YSF ++L +LTG+ P
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 24/221 (10%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIV--HEG------KLEEFINEVVI 132
A + + +G+GG G V+KG L + V KS I+ EG K +EF EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
+S +NH N+VKL G L P +V EF+ G L+ L D+ P+ W ++LR+ ++A
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIA 132
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILL-----NEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
+ Y+ + + PI HRD++S NI L N AKVADFG S+ H + +
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLL 187
Query: 248 GTFGYLDPEYFRSGQ--FTDKSDVYSFGVVLVELLTGQKPI 286
G F ++ PE + + +T+K+D YSF ++L +LTG+ P
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 24/266 (9%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V ++G+G G V K A R V +I E + + FI E+ LS++NH N+VKL G
Sbjct: 13 VEEVVGRGAFGVVCK---AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
CL LV E+ G+L+ LH T + + + ++YLHS +
Sbjct: 70 ACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 207 YHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+LL T K+ DFGT+ I QTH+T +G+ ++ PE F +++
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSNYSE 183
Query: 266 KSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKE 325
K DV+S+G++L E++T +KP + G A+ I+ N L + K
Sbjct: 184 KCDVFSWGIILWEVITRRKPF------DEIGGPAFRIMWAVHNGTRPPLIKNLPK----- 232
Query: 326 EIMTIATLATRCLNLNGKRRPTMKEV 351
I +L TRC + + +RP+M+E+
Sbjct: 233 ---PIESLMTRCWSKDPSQRPSMEEI 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 24/266 (9%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V ++G+G G V K A R V +I E + + FI E+ LS++NH N+VKL G
Sbjct: 12 VEEVVGRGAFGVVCK---AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
CL LV E+ G+L+ LH T + + + ++YLHS +
Sbjct: 69 ACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 207 YHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+LL T K+ DFGT+ I QTH+T +G+ ++ PE F +++
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSNYSE 182
Query: 266 KSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKE 325
K DV+S+G++L E++T +KP + G A+ I+ N L + K
Sbjct: 183 KCDVFSWGIILWEVITRRKPF------DEIGGPAFRIMWAVHNGTRPPLIKNLPK----- 231
Query: 326 EIMTIATLATRCLNLNGKRRPTMKEV 351
I +L TRC + + +RP+M+E+
Sbjct: 232 ---PIESLMTRCWSKDPSQRPSMEEI 254
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 24/221 (10%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIV--HEG------KLEEFINEVVI 132
A + + +G+GG G V+KG L + V KS I+ EG K +EF EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
+S +NH N+VKL G L P +V EF+ G L+ L D+ P+ W ++LR+ ++A
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIA 132
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILL-----NEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
+ Y+ + + PI HRD++S NI L N AKVADF S+ H + +
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLL 187
Query: 248 GTFGYLDPEYFRSGQ--FTDKSDVYSFGVVLVELLTGQKPI 286
G F ++ PE + + +T+K+D YSF ++L +LTG+ P
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV---IDQTHVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ ++ D H T + ++
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 45/298 (15%)
Query: 77 ELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGK------LEEFINEV 130
E+D A + I+G GG G VY+ G VAVK ++ H+ +E E
Sbjct: 3 EIDFA--ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAAR--HDPDEDISQTIENVRQEA 57
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
+ + + H N++ L G CL+ LV EF G L + L + + ++ + A +
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR----IPPDILVNWAVQ 113
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLNEKY--------TAKVADFGTSKFIVIDQTHV 242
+A ++YLH A +PI HRD+KS+NIL+ +K K+ DFG ++ + H
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHR 168
Query: 243 TTKVQ--GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAY 300
TTK+ G + ++ PE R+ F+ SDV+S+GV+L ELLTG+ P + GLA
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-----RGIDGLAVA 223
Query: 301 FILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERI 358
+ ++M N+L + + A L C N + RP+ + +L I
Sbjct: 224 YGVAM--NKLALPIPSTCPE--------PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 92 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + +
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKF 207
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV---IDQTHVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + D H T + ++
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + +
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKF 146
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV---IDQTHVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + D H T + ++
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 38 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + +
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKF 153
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV---IDQTHVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + D H T + ++
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV---IDQTHVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + D H T + ++
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV---IDQTHVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + D H T + ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV---IDQTHVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + D H T + ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV---IDQTHVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + H T + ++
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 51 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 166
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ---THVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + + H T + ++
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ---THVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + + H T + ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 30 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 145
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ---THVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + + H T + ++
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 52 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 167
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ---THVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + + H T + ++
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 25 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 140
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ---THVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + + H T + ++
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 146
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ---THVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + + H T + ++
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 28 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 143
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ---THVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + + H T + ++
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
+G G G V+ G + VA+K + EG + E+FI E ++ +++H +V+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
LE LV+EF+ +G L YL Q F E L + +V ++YL A+ + H
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+ E KV+DFG ++F++ DQ +T + + PE F +++ KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFGV++ E+ + G+ P
Sbjct: 187 VWSFGVLMWEVFSEGKIP 204
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ---THVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + + H T + ++
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLAD--GRIV--AVKK-SKIVHEGKLEEFINEVVILSQINH 138
HFN ++G+G G VY G L D G+ + AVK ++I G++ +F+ E +I+ +H
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 139 RNVVKLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
NV+ LLG CL +E PL+V ++ +G L ++ +NE T + + +VA + Y
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ---THVTTKVQGTFGYLD 254
L AS HRD+ + N +L+EK+T KVADFG ++ + + H T + ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
E ++ +FT KSDV+SFGV+L EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
+G G G V+ G + VA+K + EG + E+FI E ++ +++H +V+L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
LE LV+EF+ +G L YL Q F E L + +V ++YL A + H
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+ E KV+DFG ++F++ DQ +T + + PE F +++ KSD
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFGV++ E+ + G+ P
Sbjct: 190 VWSFGVLMWEVFSEGKIP 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
+G G G V+ G + VA+K + EG + E+FI E ++ +++H +V+L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
LE LV+EF+ +G L YL Q F E L + +V ++YL A + H
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+ E KV+DFG ++F++ DQ +T + + PE F +++ KSD
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFGV++ E+ + G+ P
Sbjct: 185 VWSFGVLMWEVFSEGKIP 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
+G G G V+ G + VA+K + EG + E+FI E ++ +++H +V+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
LE LV+EF+ +G L YL Q F E L + +V ++YL A + H
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+ E KV+DFG ++F++ DQ +T + + PE F +++ KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFGV++ E+ + G+ P
Sbjct: 187 VWSFGVLMWEVFSEGKIP 204
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + ++ + L +AT+++ ++ YL + HRD
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 134
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y ++ +++Y+ L+ + +
Sbjct: 195 AFGVLLWEIAT-------------YGMSPY--PGIDPSQVYELLEKDYRMERPEGCPEKV 239
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 240 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 278
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + ++ + L +AT+++ ++ YL + HRD
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 134
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y ++ +++Y+ L+ + +
Sbjct: 195 AFGVLLWEIAT-------------YGMSPY--PGIDPSQVYELLEKDYRMERPEGCPEKV 239
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 240 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 278
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEE--FINEVVILSQINHRNVVKLLGCC 148
+G G G V+ G + VA+K K EG + E FI E ++ +++H +V+L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
LE LV+EF+ +G L YL Q F E L + +V ++YL A + H
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+ E KV+DFG ++F++ DQ +T + + PE F +++ KSD
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFGV++ E+ + G+ P
Sbjct: 207 VWSFGVLMWEVFSEGKIP 224
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 137
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 198 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 242
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 243 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 281
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + ++ + L +AT+++ ++ YL + HRD
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 197 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 241
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 242 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 280
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 138
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 199 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 243
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 244 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 282
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 137
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 198 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 242
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 243 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 281
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + ++ + L +AT+++ ++ YL + HRD
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 141
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 202 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 246
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 247 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 285
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + ++ + L +AT+++ ++ YL + HRD
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 197 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 241
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 242 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 280
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + ++ + L +AT+++ ++ YL + HRD
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 197 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 241
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 242 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 280
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + ++ + L +AT+++ ++ YL + HRD
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 197 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 241
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 242 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 32/305 (10%)
Query: 78 LDKATDHFNVNRI-------LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEV 130
+D D + + R LG G G VY+G+ + K+ ++EEF+ E
Sbjct: 3 MDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 62
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
++ +I H N+V+LLG C ++ EF++ G L YL + N + + + L +AT+
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQ 121
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTF 250
++ ++ YL + HRD+ + N L+ E + KVADFG S+ + D +
Sbjct: 122 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 251 GYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRL 310
+ PE +F+ KSDV++FGV+L E+ T G++ Y + + +++
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------------YGMSPYPGIDL--SQV 223
Query: 311 YDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQI 370
Y+ L+ + + L C N RP+ E+ QA + I
Sbjct: 224 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH------QAFETMFQESSI 277
Query: 371 CDEIE 375
DE+E
Sbjct: 278 SDEVE 282
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
+G G G V+ G + VA+K + EG + E+FI E ++ +++H +V+L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
LE LV EF+ +G L YL Q F E L + +V ++YL A + H
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+ E KV+DFG ++F++ DQ +T + + PE F +++ KSD
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFGV++ E+ + G+ P
Sbjct: 188 VWSFGVLMWEVFSEGKIP 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 138
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 199 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 243
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 244 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 282
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 27/294 (9%)
Query: 65 GSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLE 124
GS+D+ ++ + TD + LG G G VY+G+ + K+ ++E
Sbjct: 1 GSLDKWEM-------ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 52
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMR 184
EF+ E ++ +I H N+V+LLG C ++ EF++ G L YL + N + ++ +
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVL 111
Query: 185 LRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT 244
L +AT+++ ++ YL + HRD+ + N L+ E + KVADFG S+ + D
Sbjct: 112 LYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 245 KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILS 304
+ + PE +F+ KSDV++FGV+L E+ T G++ Y
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------------YGMSPY--PG 213
Query: 305 MEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERI 358
++ +++Y+ L+ + + L C N RP+ E+ E +
Sbjct: 214 IDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 141
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 202 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 246
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 247 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 285
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 149
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 209
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 210 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 254
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 255 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 293
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 21/294 (7%)
Query: 65 GSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLE 124
G++D + E+++ TD + LG G G VY+G+ + K+ ++E
Sbjct: 1 GAMDPSPNYDKWEMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 58
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMR 184
EF+ E ++ +I H N+V+LLG C ++ EF++ G L YL + N + + +
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVL 117
Query: 185 LRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT 244
L +AT+++ ++ YL + HRD+ + N L+ E + KVADFG S+ + D
Sbjct: 118 LYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 174
Query: 245 KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILS 304
+ + PE +F+ KSDV++FGV+L E+ T G++ Y +
Sbjct: 175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------------YGMSPYPGID 221
Query: 305 MEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERI 358
+ +++Y+ L+ + + L C N RP+ E+ E +
Sbjct: 222 L--SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 110/205 (53%), Gaps = 14/205 (6%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V + +G G GTVYKG V + +L+ F NEV +L + H N++ +G
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMR--LRIATEVAGSLSYLHSAASM 204
+ ++ +V ++ +L+ +LH +F EM+ + IA + A + YLH+ +
Sbjct: 88 YSTKPQL-AIVTQWCEGSSLYHHLHASETKF----EMKKLIDIARQTARGMDYLHAKS-- 140
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFG-TSKFIVIDQTHVTTKVQGTFGYLDPEYFR---S 260
I HRD+KS NI L+E T K+ DFG ++ +H ++ G+ ++ PE R S
Sbjct: 141 -IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 261 GQFTDKSDVYSFGVVLVELLTGQKP 285
++ +SDVY+FG+VL EL+TGQ P
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 16/231 (6%)
Query: 65 GSIDRCKLFTTKELDKATD------HFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIV 118
GS DR ++ T D + D V + +G G GTVYKG V +
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP 178
+L+ F NEV +L + H N++ +G + ++ + V ++ +L+ +LH +F
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFE 130
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFG-TSKFIVI 237
+ + IA + A + YLH+ + I HRD+KS NI L+E T K+ DFG ++
Sbjct: 131 MI--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW 185
Query: 238 DQTHVTTKVQGTFGYLDPEYFR---SGQFTDKSDVYSFGVVLVELLTGQKP 285
+H ++ G+ ++ PE R ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 14/205 (6%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V + +G G GTVYKG V + +L+ F NEV +L + H N++ +G
Sbjct: 16 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMR--LRIATEVAGSLSYLHSAASM 204
+ ++ +V ++ +L+ +LH +F EM+ + IA + A + YLH+ +
Sbjct: 76 YSTKPQL-AIVTQWCEGSSLYHHLHASETKF----EMKKLIDIARQTARGMDYLHAKS-- 128
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFGYLDPEYFR---S 260
I HRD+KS NI L+E T K+ DFG + +H ++ G+ ++ PE R S
Sbjct: 129 -IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 261 GQFTDKSDVYSFGVVLVELLTGQKP 285
++ +SDVY+FG+VL EL+TGQ P
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 16/231 (6%)
Query: 65 GSIDRCKLFTTKELDKATD------HFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIV 118
GS DR ++ T D + D V + +G G GTVYKG V +
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP 178
+L+ F NEV +L + H N++ +G + ++ + V ++ +L+ +LH +F
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFE 130
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-I 237
+ + IA + A + YLH+ + I HRD+KS NI L+E T K+ DFG +
Sbjct: 131 MI--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 185
Query: 238 DQTHVTTKVQGTFGYLDPEYFR---SGQFTDKSDVYSFGVVLVELLTGQKP 285
+H ++ G+ ++ PE R ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + ++ + L +AT+++ ++ YL + HR+
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFI---HRN 343
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 404 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 448
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 449 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 487
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 14/205 (6%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V + +G G GTVYKG V + +L+ F NEV +L + H N++ +G
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMR--LRIATEVAGSLSYLHSAASM 204
++ +V ++ +L+ +LH +F EM+ + IA + A + YLH+ +
Sbjct: 88 YSTAPQL-AIVTQWCEGSSLYHHLHASETKF----EMKKLIDIARQTARGMDYLHAKS-- 140
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFG-TSKFIVIDQTHVTTKVQGTFGYLDPEYFR---S 260
I HRD+KS NI L+E T K+ DFG ++ +H ++ G+ ++ PE R S
Sbjct: 141 -IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 261 GQFTDKSDVYSFGVVLVELLTGQKP 285
++ +SDVY+FG+VL EL+TGQ P
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 19/268 (7%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 141
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 202 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 246
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERI 358
L C N RP+ E+ E +
Sbjct: 247 YELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 19/268 (7%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 141
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 202 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 246
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERI 358
L C N RP+ E+ E +
Sbjct: 247 YELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 19/268 (7%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 141
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 202 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 246
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERI 358
L C N RP+ E+ E +
Sbjct: 247 YELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HR+
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRN 382
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 443 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 487
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 488 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 526
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HR+
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRN 340
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 401 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 445
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDEIE 375
L C N RP+ E+ QA + I DE+E
Sbjct: 446 YELMRACWQWNPSDRPSFAEIH------QAFETMFQESSISDEVE 484
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 19/268 (7%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 197 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 241
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERI 358
L C N RP+ E+ E +
Sbjct: 242 YELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 19/268 (7%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY+G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
++ EF++ G L YL + N + + + L +AT+++ ++ YL + HRD
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFI---HRD 136
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE +F+ KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
+FGV+L E+ T G++ Y + + +++Y+ L+ + +
Sbjct: 197 AFGVLLWEIAT-------------YGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKV 241
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERI 358
L C N RP+ E+ E +
Sbjct: 242 YELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 20/233 (8%)
Query: 65 GSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKI----VHE 120
GS ++ E + A + ++R LGQG G VY+G +A G + ++++ V+E
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE 59
Query: 121 GKLE----EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEE 176
EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL E
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 177 F-------PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADF 229
P + +++A E+A ++YL++ HRD+ + N ++ E +T K+ DF
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 176
Query: 230 GTSKFIV-IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
G ++ I D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 177 GMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 117/206 (56%), Gaps = 14/206 (6%)
Query: 89 RILGQGGQGTVYKGML--ADGR---IVAVKKSKIVH-EGKLEEFINEVVILSQINHRNVV 142
+++G G G VYKGML + G+ VA+K K + E + +F+ E I+ Q +H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAA 202
+L G + + +++ E++ NG L ++L +++ EF + L++ + G + + A
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV-----LQLVGMLRGIAAGMKYLA 164
Query: 203 SMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ--THVTTKVQGTFGYLDPEYFRS 260
+M HRD+ + NIL+N KV+DFG S+ + D T+ T+ + + PE
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 261 GQFTDKSDVYSFGVVLVELLT-GQKP 285
+FT SDV+SFG+V+ E++T G++P
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 115/230 (50%), Gaps = 16/230 (6%)
Query: 66 SIDRCKLFTTKELDKATD------HFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVH 119
S DR ++ T D + D V + +G G GTVYKG V +
Sbjct: 12 SEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 71
Query: 120 EGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPL 179
+L+ F NEV +L + H N++ +G + ++ + V ++ +L+ +LH +F +
Sbjct: 72 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM 130
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-ID 238
+ IA + A + YLH+ + I HRD+KS NI L+E T K+ DFG +
Sbjct: 131 I--KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 185
Query: 239 QTHVTTKVQGTFGYLDPEYFR---SGQFTDKSDVYSFGVVLVELLTGQKP 285
+H ++ G+ ++ PE R ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 186 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 32/287 (11%)
Query: 87 VNRILGQGGQGTVYKGMLADGR----IVAVK--KSKIVHEGKLEEFINEVVILSQINHRN 140
+NRILG+G G VY+G+ + + VAVK K + K E+F++E VI+ ++H +
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPH 70
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+VKL+G +E E ++ E G L YL ++N LT + + ++ +++YL
Sbjct: 71 IVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLE 126
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
S + HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 127 SINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 183
Query: 260 SGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQV 318
+FT SDV+ F V + E+L+ G++P +K+ G+ +E+ D++
Sbjct: 184 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-------LEKG-------DRL 229
Query: 319 LKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDI 365
K ++ TL TRC + + RP E+ L + ++KDI
Sbjct: 230 PKPDLCPPVLY--TLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDI 274
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 16/228 (7%)
Query: 68 DRCKLFTTKELDKATD------HFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEG 121
DR ++ T D + D V + +G G GTVYKG V +
Sbjct: 7 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 66
Query: 122 KLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTW 181
+L+ F NEV +L + H N++ +G + ++ + V ++ +L+ +LH +F +
Sbjct: 67 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI- 124
Query: 182 EMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFG-TSKFIVIDQT 240
+ IA + A + YLH+ + I HRD+KS NI L+E T K+ DFG ++ +
Sbjct: 125 -KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 180
Query: 241 HVTTKVQGTFGYLDPEYFR---SGQFTDKSDVYSFGVVLVELLTGQKP 285
H ++ G+ ++ PE R ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 181 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 20/233 (8%)
Query: 65 GSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRI-------VAVKK-SK 116
GS ++ E + A + ++R LGQG G VY+G +A G + VA+K ++
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE 59
Query: 117 IVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEE 176
+ EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL E
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 177 F-------PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADF 229
P + +++A E+A ++YL++ HRD+ + N ++ E +T K+ DF
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 176
Query: 230 GTSKFIV-IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
G ++ I D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 177 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 32/287 (11%)
Query: 87 VNRILGQGGQGTVYKGMLADGR----IVAVK--KSKIVHEGKLEEFINEVVILSQINHRN 140
+NRILG+G G VY+G+ + + VAVK K + K E+F++E VI+ ++H +
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPH 74
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+VKL+G +E E ++ E G L YL ++N LT + + ++ +++YL
Sbjct: 75 IVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLE 130
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
S + HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 131 SINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 187
Query: 260 SGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQV 318
+FT SDV+ F V + E+L+ G++P +K+ G+ +E+ D++
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-------LEKG-------DRL 233
Query: 319 LKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDI 365
K ++ TL TRC + + RP E+ L + ++KDI
Sbjct: 234 PKPDLCPPVLY--TLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDI 278
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 32/287 (11%)
Query: 87 VNRILGQGGQGTVYKGMLADGR----IVAVK--KSKIVHEGKLEEFINEVVILSQINHRN 140
+NRILG+G G VY+G+ + + VAVK K + K E+F++E VI+ ++H +
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPH 86
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+VKL+G +E E ++ E G L YL ++N LT + + ++ +++YL
Sbjct: 87 IVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLE 142
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
S + HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 143 SINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 199
Query: 260 SGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQV 318
+FT SDV+ F V + E+L+ G++P +K+ G+ +E+ D++
Sbjct: 200 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-------LEKG-------DRL 245
Query: 319 LKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDI 365
K ++ TL TRC + + RP E+ L + ++KDI
Sbjct: 246 PKPDLCPPVLY--TLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDI 290
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 21/269 (7%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G VY G+ + K+ ++EEF+ E ++ +I H N+V+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
+V E++ G L YL + N E +T + L +AT+++ ++ YL + HRD
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNRE-EVTAVVLLYMATQISSAMEYLEKKNFI---HRD 155
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+ + N L+ E + KVADFG S+ + D + + PE F+ KSDV+
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVW 215
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMT- 329
+FGV+L E+ T G++ Y ++ +++YD L ++ ++ Q E
Sbjct: 216 AFGVLLWEIAT-------------YGMSPY--PGIDLSQVYDLL-EKGYRMEQPEGCPPK 259
Query: 330 IATLATRCLNLNGKRRPTMKEVAMELERI 358
+ L C + RP+ E E +
Sbjct: 260 VYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 154/318 (48%), Gaps = 49/318 (15%)
Query: 56 LQQQLTSSDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKK 114
L + LT S + ++ +L KE + ++LG G GTVYKG+ + +G V +
Sbjct: 16 LVEPLTPSGTAPNQAQLRILKETE-----LKRVKVLGSGAFGTVYKGIWVPEGETVKIPV 70
Query: 115 S-KIVHEGKLE----EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQY 169
+ KI++E EF++E +I++ ++H ++V+LLG CL + LV + + +G L +Y
Sbjct: 71 AIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEY 129
Query: 170 LHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADF 229
+H+ + + ++ L ++A + YL + HRD+ + N+L+ K+ DF
Sbjct: 130 VHEHKDN--IGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDF 184
Query: 230 GTSKFIVIDQTHVTT---KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
G ++ + D+ K+ + L+ ++R +FT +SDV+S+GV + EL+T G KP
Sbjct: 185 GLARLLEGDEKEYNADGGKMPIKWMALECIHYR--KFTHQSDVWSYGVTIWELMTFGGKP 242
Query: 286 IILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATL-----ATRCLNL 340
++E L L+ G++ I T+ +C +
Sbjct: 243 YDGIPTREIPDL---------------------LEKGERLPQPPICTIDVYMVMVKCWMI 281
Query: 341 NGKRRPTMKEVAMELERI 358
+ RP KE+A E R+
Sbjct: 282 DADSRPKFKELAAEFSRM 299
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKI----VHEGKLE--- 124
+F E + A + ++R LGQG G VY+G +A G + ++++ V+E
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 125 -EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------ 177
EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL E
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 178 -PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV 236
P + +++A E+A ++YL++ HRD+ + N ++ E +T K+ DFG ++ I
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 237 -IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 10/203 (4%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V + +G G GTVYKG V + +L+ F NEV +L + H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ ++ +V ++ +L+ +LH +F + + IA + A + YLH+ + I
Sbjct: 72 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---I 125
Query: 207 YHRDIKSTNILLNEKYTAKVADFG-TSKFIVIDQTHVTTKVQGTFGYLDPEYFR---SGQ 262
HRD+KS NI L+E T K+ DFG ++ +H ++ G+ ++ PE R
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 263 FTDKSDVYSFGVVLVELLTGQKP 285
++ +SDVY+FG+VL EL+TGQ P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V + +G G GTVYKG V + +L+ F NEV +L + H N++ +G
Sbjct: 14 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ ++ + V ++ +L+ +LH +F + + IA + A + YLH+ + I
Sbjct: 74 YSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---I 127
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFGYLDPEYFR---SGQ 262
HRD+KS NI L+E T K+ DFG + +H ++ G+ ++ PE R
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 263 FTDKSDVYSFGVVLVELLTGQKP 285
++ +SDVY+FG+VL EL+TGQ P
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 20/204 (9%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEG--KLEEFINEVVILSQINHRNVVKLLGCC 148
+G G GTVYKG VAVK K+V + + F NEV +L + H N++ +G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + +V ++ +L+++LH Q +F + + IA + A + YLH+ I H
Sbjct: 102 TKDNL-AIVTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLHAKN---IIH 155
Query: 209 RDIKSTNILLNEKYTAKVADFG----TSKFIVIDQTHVTTKVQGTFGYLDPEYFR---SG 261
RD+KS NI L+E T K+ DFG S++ Q T G+ ++ PE R +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWMAPEVIRMQDNN 212
Query: 262 QFTDKSDVYSFGVVLVELLTGQKP 285
F+ +SDVYS+G+VL EL+TG+ P
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V + +G G GTVYKG V + +L+ F NEV +L + H N++ +G
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ ++ +V ++ +L+ +LH +F + + IA + A + YLH+ + I
Sbjct: 77 YSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---I 130
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFGYLDPEYFR---SGQ 262
HRD+KS NI L+E T K+ DFG + +H ++ G+ ++ PE R
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 263 FTDKSDVYSFGVVLVELLTGQKP 285
++ +SDVY+FG+VL EL+TGQ P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V + +G G GTVYKG V + +L+ F NEV +L + H N++ +G
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ ++ + V ++ +L+ +LH +F + + IA + A + YLH+ + I
Sbjct: 77 YSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---I 130
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFGYLDPEYFR---SGQ 262
HRD+KS NI L+E T K+ DFG + +H ++ G+ ++ PE R
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 263 FTDKSDVYSFGVVLVELLTGQKP 285
++ +SDVY+FG+VL EL+TGQ P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V + +G G GTVYKG V + +L+ F NEV +L + H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ ++ + V ++ +L+ +LH +F + + IA + A + YLH+ + I
Sbjct: 72 YSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---I 125
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFGYLDPEYFR---SGQ 262
HRD+KS NI L+E T K+ DFG + +H ++ G+ ++ PE R
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 263 FTDKSDVYSFGVVLVELLTGQKP 285
++ +SDVY+FG+VL EL+TGQ P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLA-DGR---IVAVKKSKIVH-EGKLEEFINE 129
KELD + + R++G G G V G L G+ VA+K K+ + E + +F+ E
Sbjct: 37 AKELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCE 94
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H NVV L G + ++V EF+ NG L +L + +F + + +
Sbjct: 95 ASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI--QLVGMLR 152
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+A + YL A M HRD+ + NIL+N KV+DFG S+ I D V T G
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE + +FT SDV+S+G+V+ E+++ G++P
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 10/203 (4%)
Query: 87 VNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
V + +G G GTVYKG V + +L+ F NEV +L + H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
++ + V ++ +L+ +LH +F + + IA + A + YLH+ + I
Sbjct: 72 YSTAPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---I 125
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFGYLDPEYFR---SGQ 262
HRD+KS NI L+E T K+ DFG + +H ++ G+ ++ PE R
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 263 FTDKSDVYSFGVVLVELLTGQKP 285
++ +SDVY+FG+VL EL+TGQ P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 44/285 (15%)
Query: 89 RILGQGGQGTVYKGM-LADGRIVAVKKS-KIVHEGKLE----EFINEVVILSQINHRNVV 142
++LG G GTVYKG+ + +G V + + KI++E EF++E +I++ ++H ++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAA 202
+LLG CL + LV + + +G L +Y+H+ + + ++ L ++A + YL
Sbjct: 81 RLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN--IGSQLLLNWCVQIAKGMMYLEERR 137
Query: 203 SMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFGYLDPEYFR 259
+ HRD+ + N+L+ K+ DFG ++ + D+ K+ + L+ ++R
Sbjct: 138 ---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 260 SGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQV 318
+FT +SDV+S+GV + EL+T G KP ++E L
Sbjct: 195 --KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL--------------------- 231
Query: 319 LKVGQKEEIMTIATL-----ATRCLNLNGKRRPTMKEVAMELERI 358
L+ G++ I T+ +C ++ RP KE+A E R+
Sbjct: 232 LEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 20/231 (8%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKI----VHEG- 121
+ ++ E + A + ++R LGQG G VY+G +A G + ++++ V+E
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA 60
Query: 122 ---KLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF- 177
+ EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL E
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 178 ------PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGT 231
P + +++A E+A ++YL++ HRD+ + N ++ E +T K+ DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 232 SKFIV-IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
++ I D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 77 ELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKI----VHEG----KLEEFIN 128
E + A + ++R LGQG G VY+G +A G + ++++ V+E + EF+N
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF-------PLTW 181
E ++ + N +VV+LLG + + L++ E ++ G L YL E P +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 182 EMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQT 240
+++A E+A ++YL++ HRD+ + N ++ E +T K+ DFG ++ I D
Sbjct: 123 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 241 HVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRI-------VAVKK-SKIV 118
+ ++ E + A + ++R LGQG G VY+G +A G + VA+K ++
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA 60
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF- 177
+ EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL E
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 178 ------PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGT 231
P + +++A E+A ++YL++ HRD+ + N ++ E +T K+ DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 232 SKFIV-IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
++ I D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 91 LGQGGQGTVY----KGMLA--DGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL 144
LG+G G V+ +L D +VAVK K E ++F E +L+ + H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------------PLTWEMRLRIATEVA 192
G C E L+V+E++ +G L ++L + PL L +A++VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFG 251
+ YL A + HRD+ + N L+ + K+ DFG S+ I D V +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEA 294
++ PE +FT +SDV+SFGVVL E+ T G++P + EA
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 246
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 91 LGQGGQGTVY----KGMLA--DGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL 144
LG+G G V+ +L D +VAVK K E ++F E +L+ + H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------------PLTWEMRLRIATEVA 192
G C E L+V+E++ +G L ++L + PL L +A++VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFG 251
+ YL A + HRD+ + N L+ + K+ DFG S+ I D V +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEA 294
++ PE +FT +SDV+SFGVVL E+ T G++P + EA
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 240
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKI----VHEGKLE--- 124
++ E + A + ++R LGQG G VY+G +A G + ++++ V+E
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 125 -EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------ 177
EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL E
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 178 -PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV 236
P + +++A E+A ++YL++ HRD+ + N ++ E +T K+ DFG ++ I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 237 -IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 91 LGQGGQGTVY----KGMLA--DGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL 144
LG+G G V+ +L D +VAVK K E ++F E +L+ + H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------------PLTWEMRLRIATEVA 192
G C E L+V+E++ +G L ++L + PL L +A++VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFG 251
+ YL A + HRD+ + N L+ + K+ DFG S+ I D V +
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEA 294
++ PE +FT +SDV+SFGVVL E+ T G++P + EA
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 269
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRI-------VAVKK-SKIVHEGKL 123
++ E + A + ++R LGQG G VY+G +A G + VA+K ++ +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 124 EEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------ 177
EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL E
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 178 -PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV 236
P + +++A E+A ++YL++ HRD+ + N ++ E +T K+ DFG ++ I
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 237 -IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 12/212 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V G VA+K ++ EG + +EFI E ++ ++H +V+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ ++ E+++NG L YL + F + L + +V ++ YL S + H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 127
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+N++ KV+DFG S++++ D+ + + + PE +F+ KSD
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 187
Query: 269 VYSFGVVLVELLT-GQKPI-ILTGSKEATGLA 298
+++FGV++ E+ + G+ P T S+ A +A
Sbjct: 188 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 219
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 12/212 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V G VA+K ++ EG + +EFI E ++ ++H +V+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ ++ E+++NG L YL + F + L + +V ++ YL S + H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 123
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+N++ KV+DFG S++++ D+ + + + PE +F+ KSD
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 269 VYSFGVVLVELLT-GQKPI-ILTGSKEATGLA 298
+++FGV++ E+ + G+ P T S+ A +A
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 215
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 38/293 (12%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA--DGRIVAVK----KSKIVHEGKLEEFINEVVILSQIN 137
F + R+LG+G G+V + L DG V V K+ I+ +EEF+ E + + +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 138 HRNVVKLLGCCLETE------VPLLVYEFISNGTLFQYLHDQN---EEFPLTWEMRLRIA 188
H +V KL+G L + +P+++ F+ +G L +L F L + +R
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVI-DQTHVTTKVQ 247
++A + YL +S HRD+ + N +L E T VADFG S+ I D +
Sbjct: 144 VDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSME 306
+L E +T SDV++FGV + E++T GQ P +E
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA----------------GIE 244
Query: 307 ENRLYDFLDDQVLKVGQKEEIM-TIATLATRCLNLNGKRRPTMKEVAMELERI 358
+Y++L ++ Q E M + L +C + + K+RP+ + MELE I
Sbjct: 245 NAEIYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 15/231 (6%)
Query: 65 GSIDRCKLFTTKELDKATDHFNV--NRILGQGGQGTVYKGML---ADGRI-VAVKKSKIV 118
G + R T E K D N+ ++++G G G V G L + I VA+K K+
Sbjct: 13 GLVPRGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 72
Query: 119 H-EGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF 177
+ E + +F+ E I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F
Sbjct: 73 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 132
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVI 237
+ +++ + G S + + M HRD+ + NIL+N KV+DFG S+ +
Sbjct: 133 TV-----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 187
Query: 238 DQTHVTTKVQGTFG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
D T G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 188 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 20/221 (9%)
Query: 77 ELDKATDHFNVNRILGQGGQGTVYKGMLADGRI-------VAVKK-SKIVHEGKLEEFIN 128
E + A + ++R LGQG G VY+G +A G + VA+K ++ + EF+N
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF-------PLTW 181
E ++ + N +VV+LLG + + L++ E ++ G L YL E P +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 182 EMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQT 240
+++A E+A ++YL++ HRD+ + N ++ E +T K+ DFG ++ I D
Sbjct: 125 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 241 HVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKI----VHEG----KL 123
++ E + A + ++R LGQG G VY+G +A G + ++++ V+E +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 59
Query: 124 EEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------ 177
EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL E
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 178 -PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV 236
P + +++A E+A ++YL++ HRD+ + N + E +T K+ DFG ++ I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 237 -IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 18/203 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVK---KSKIV----HEGKLEEFINEVVILSQINHRNVVK 143
LG GG TVY LA+ I+ +K K+ + E L+ F EV SQ++H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
++ E + LV E+I TL +Y+ PL+ + + ++ + + H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHD--- 129
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQF 263
M I HRDIK NIL++ T K+ DFG +K + T V GT Y PE + G+
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK-GEA 188
Query: 264 TDK-SDVYSFGVVLVELLTGQKP 285
TD+ +D+YS G+VL E+L G+ P
Sbjct: 189 TDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 12/212 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V G VA+K ++ EG + +EFI E ++ ++H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ ++ E+++NG L YL + F + L + +V ++ YL S + H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 128
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+N++ KV+DFG S++++ D+ + + + PE +F+ KSD
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 269 VYSFGVVLVELLT-GQKPI-ILTGSKEATGLA 298
+++FGV++ E+ + G+ P T S+ A +A
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 12/212 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V G VA+K ++ EG + +EFI E ++ ++H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ ++ E+++NG L YL + F + L + +V ++ YL S + H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 128
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+N++ KV+DFG S++++ D+ + + + PE +F+ KSD
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 269 VYSFGVVLVELLT-GQKPI-ILTGSKEATGLA 298
+++FGV++ E+ + G+ P T S+ A +A
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 35/283 (12%)
Query: 88 NRILGQGGQGTVYKGMLAD---GRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVV 142
+R++G+G G VY G D RI A+K S+I ++E F+ E +++ +NH NV+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 143 KLLGCCLETE-VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSA 201
L+G L E +P ++ ++ +G L Q++ P ++ + +VA + YL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN-PTVKDL-ISFGLQVARGMEYL--- 140
Query: 202 ASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVID-----QTHVTTKVQGTFGYLDPE 256
A HRD+ + N +L+E +T KVADFG ++ I+ Q H ++ + L E
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL--E 198
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRLYDFLD 315
++ +FT KSDV+SFGV+L ELLT G P + T +F+ ++
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT----HFLAQGRRLPQPEYCP 254
Query: 316 DQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERI 358
D + +V Q+ C + RPT + + E+E+I
Sbjct: 255 DSLYQVMQQ------------CWEADPAVRPTFRVLVGEVEQI 285
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 12/212 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V G VA+K ++ EG + +EFI E ++ ++H +V+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ ++ E+++NG L YL + F + L + +V ++ YL S + H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 134
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+N++ KV+DFG S++++ D+ + + + PE +F+ KSD
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 194
Query: 269 VYSFGVVLVELLT-GQKPI-ILTGSKEATGLA 298
+++FGV++ E+ + G+ P T S+ A +A
Sbjct: 195 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 226
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 10 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F + +++
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-----IQLVG 122
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V G VA+K ++ EG + +EFI E ++ ++H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ ++ E+++NG L YL + F + L + +V ++ YL S + H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 143
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+N++ KV+DFG S++++ D+ + + + PE +F+ KSD
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 269 VYSFGVVLVELLT-GQKP 285
+++FGV++ E+ + G+ P
Sbjct: 204 IWAFGVLMWEIYSLGKMP 221
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 12/212 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V G VA+K ++ EG + +EFI E ++ ++H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ ++ E+++NG L YL + F + L + +V ++ YL S + H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 143
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + N L+N++ KV+DFG S++++ D+ + + + PE +F+ KSD
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 269 VYSFGVVLVELLT-GQKPI-ILTGSKEATGLA 298
+++FGV++ E+ + G+ P T S+ A +A
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 138/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H R LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ EF+ G+L +YL E L+ +++ +
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI--KLLQYTSQICKGME 131
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 132 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 189 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 248 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 39 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-----IQLVG 151
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 152 MLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 20/226 (8%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRI-------VAVKK-SKIVHEGKL 123
++ E + A + ++R LGQG G VY+G +A G + VA+K ++ +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 124 EEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------ 177
EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 178 -PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV 236
P + +++A E+A ++YL++ HRD+ + N ++ E +T K+ DFG ++ I
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 237 -IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 37 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F + +++
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-----IQLVG 149
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 150 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 39 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-----IQLVG 151
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 39 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-----IQLVG 151
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 39 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-----IQLVG 151
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 39 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-----IQLVG 151
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 20/226 (8%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKI----VHEGKLE--- 124
++ E + A + ++R LGQG G VY+G +A G + ++++ V+E
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 125 -EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------ 177
EF+NE ++ + N +VV+LLG + + L++ E ++ G L YL
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 178 -PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV 236
P + +++A E+A ++YL++ HRD+ + N ++ E +T K+ DFG ++ I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 237 -IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
D K ++ PE + G FT SDV+SFGVVL E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T +
Sbjct: 117 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLC 170
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 225
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 226 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 118
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLC 172
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 228 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 118
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLC 172
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 228 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 114
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T +
Sbjct: 115 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLC 168
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 223
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 224 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 118
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLC 172
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 228 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPXLREV 259
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 26 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 85
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 139
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T +
Sbjct: 140 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLC 193
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 248
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 249 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 280
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 17 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 76
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 77 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 130
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T +
Sbjct: 131 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLC 184
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 239
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 240 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 271
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 116/219 (52%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 10 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E + NG+L +L + +F + +++
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-----IQLVG 122
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 117/219 (53%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 39 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-----IQLVG 151
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG ++ + D T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK 211
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + T++ GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYL 173
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 229 VTE-----GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T +
Sbjct: 117 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLC 170
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 225
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 226 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 116/219 (52%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 39 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E + NG+L +L + +F + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-----IQLVG 151
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 152 MLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVV 131
K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIA 188
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T + G
Sbjct: 115 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCG 168
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
T YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEF 223
Query: 309 RLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 224 TFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 116/219 (52%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 39 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E++ NG+L +L + +F + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-----IQLVG 151
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG + + D T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK 211
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ G ++ Q L +E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ 118
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + T +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLC 172
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 228 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 259
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 116/219 (52%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML---ADGRI-VAVKKSKIVH-EGKLEEFINE 129
KELD + ++++++G G G V G L + I VA+K K+ + E + +F+ E
Sbjct: 39 AKELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N+++L G +++ ++V E + NG+L +L + +F + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-----IQLVG 151
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 87 VNRILGQGGQGTVYKGML------ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRN 140
+ R LG+G G V+ D +VAVK K + ++F E +L+ + H +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLH----------DQNEEFPLTWEMRLRIATE 190
+VK G C+E + ++V+E++ +G L ++L + N LT L IA +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGT 249
+A + YL AS HRD+ + N L+ E K+ DFG S+ + D V
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
++ PE +FT +SDV+S GVVL E+ T G++P
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + T + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYL 173
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 229 VTE-----GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + T + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYL 173
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 229 VTE-----GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + T + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYL 173
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 229 VTE-----GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 118
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + T + GT YL
Sbjct: 119 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYL 172
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 227
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 228 VTE-----GARD-------LISRLLKHNPSQRPMLREV 253
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 129/284 (45%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ G ++ Q L +E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ 118
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLX 172
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 228 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 259
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 123
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + T + GT YL
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYL 177
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 232
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 233 VTE-----GARD-------LISRLLKHNPSQRPMLREV 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 115
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + +
Sbjct: 116 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLC 169
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 224
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 225 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 256
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 115
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+A+FG S V + T +
Sbjct: 116 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLC 169
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 224
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 225 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 256
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 129/283 (45%), Gaps = 36/283 (12%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVV 131
K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIA 188
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 115
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
TE+A +LSY HS + HRDIK N+LL K+ADFG S + T + G
Sbjct: 116 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSG 169
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
T YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEF 224
Query: 309 RLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 225 TFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 255
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+GQG GTVY M +A G+ VA+++ + + K E INE++++ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 150 ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHR 209
+ +V E+++ G+L D E + + E +L +LHS + HR
Sbjct: 88 VGDELWVVMEYLAGGSL----TDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 140
Query: 210 DIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDV 269
DIKS NILL + K+ DFG I +Q+ +T V GT ++ PE + K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 270 YSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMT 329
+S G++ +E++ G+ P + A LY + ++ E++
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRA---------------LYLIATNGTPELQNPEKLSA 244
Query: 330 I-ATLATRCLNLNGKRRPTMKEV 351
I RCL+++ ++R + KE+
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKEL 267
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 49/303 (16%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLAD---GRIVAVKKSKIVHEG----KLE 124
+F E + + + + R LGQG G VY+G D G K V+E +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------- 177
EF+NE ++ +VV+LLG + + L+V E +++G L YL E
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV- 236
P T + +++A E+A ++YL++ HRD+ + N ++ +T K+ DFG ++ I
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 237 IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATG 296
D K ++ PE + G FT SD++SFGVVL E
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE------------------ 221
Query: 297 LAAYFILSMEENRLYDFLDDQVLK-------VGQKEEIM-TIATLATRCLNLNGKRRPTM 348
I S+ E ++QVLK + Q + + L C N K RPT
Sbjct: 222 -----ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 276
Query: 349 KEV 351
E+
Sbjct: 277 LEI 279
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + +
Sbjct: 117 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLC 170
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 225
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 226 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 26 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 85
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 139
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + +
Sbjct: 140 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLC 193
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 248
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 249 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 280
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 49/303 (16%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLAD---GRIVAVKKSKIVHEG----KLE 124
+F E + + + + R LGQG G VY+G D G K V+E +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------- 177
EF+NE ++ +VV+LLG + + L+V E +++G L YL E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV- 236
P T + +++A E+A ++YL++ HRD+ + N ++ +T K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 237 IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATG 296
D K ++ PE + G FT SD++SFGVVL E
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE------------------ 224
Query: 297 LAAYFILSMEENRLYDFLDDQVLK-------VGQKEEIM-TIATLATRCLNLNGKRRPTM 348
I S+ E ++QVLK + Q + + L C N K RPT
Sbjct: 225 -----ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 279
Query: 349 KEV 351
E+
Sbjct: 280 LEI 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 114
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+ADFG S V + +
Sbjct: 115 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLC 168
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 223
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 224 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 255
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 116
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + T + GT YL
Sbjct: 117 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYL 170
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 225
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 226 VTE-----GARD-------LISRLLKHNPSQRPMLREV 251
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 73 SEEPI-XIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 127
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 188 VWSFGILLTELTTKGRVP 205
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 69
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 127
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 128 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 185 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 243
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 244 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 110/202 (54%), Gaps = 13/202 (6%)
Query: 91 LGQGGQGTVYKGM--LADGRI-VAVKKSKI-VHEGKLEEFINEVVILSQINHRNVVKLLG 146
LG G G+V +G+ + +I VA+K K + EE + E I+ Q+++ +V+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
C + E +LV E G L ++L + EE P++ + +V+ + YL
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEKN---F 131
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQFT 264
HRD+ + N+LL ++ AK++DFG SK + D ++ T + G + + PE +F+
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 265 DKSDVYSFGVVLVELLT-GQKP 285
+SDV+S+GV + E L+ GQKP
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKP 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 15/209 (7%)
Query: 87 VNRILGQGGQGTVYKGMLA-DGR---IVAVKKSKIVH-EGKLEEFINEVVILSQINHRNV 141
+ +++G G G V G L G+ VA+K K + E + +F++E I+ Q +H NV
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSA 201
+ L G ++ +++ EF+ NG+L +L + +F + + + +A + YL
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI--QLVGMLRGIAAGMKYL--- 151
Query: 202 ASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT-TKVQG---TFGYLDPEY 257
A M HRD+ + NIL+N KV+DFG S+F+ D + T T G + PE
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 258 FRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ +FT SDV+S+G+V+ E+++ G++P
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEV 130
+K+ A + F + R LG+G G VY + I+A+K K+++ G + EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRI 187
I S + H N+++L G + L+ E+ GT++ Q L +E+ T+
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
TE+A +LSY HS + HRDIK N+LL K+A+FG S V + T +
Sbjct: 117 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLC 170
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
GT YL PE +K D++S GV+ E L G+ P +E Y +S E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 225
Query: 308 NRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
DF+ + G ++ L +R L N +RP ++EV
Sbjct: 226 FTFPDFVTE-----GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 129/278 (46%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + + I+A+K K+++ G + EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G ++ L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + + GT YL
Sbjct: 120 ALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYL 173
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P + T Y +S E DF
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----EANTYQDTYKRISRVEFTFPDF 228
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 229 VTE-----GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 127/278 (45%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + + GT YL
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYL 176
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 231
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 232 VTE-----GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 68
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 126
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 127 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +F+ SDV+SFGVVL EL T + SK I + ++ ++ F
Sbjct: 184 -PESLTESKFSVASDVWSFGVVLYELFT-----YIEKSKSPPAEFMRMIGNDKQGQMIVF 237
Query: 314 LDDQVLKV--------GQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
++LK G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 238 HLIELLKNNGRLPRPDGCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 128
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 129 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 186 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 245 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 128
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 129 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 186 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 245 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E + L+ +++ +
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGME 128
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 129 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 186 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 245 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 77
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 135
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 136 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 193 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 251
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 252 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 297
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 74
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E + L+ +++ +
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGME 132
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 133 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 190 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 248
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 249 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 131
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 132 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 189 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 248 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 76
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 134
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 135 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 192 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 250
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 251 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 296
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 75
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 133
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 134 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 191 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 249
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 250 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 295
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 127/278 (45%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYL 173
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 229 VTE-----GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 19/222 (8%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML-ADGR---IVAVKKSKIVH-EGKLEEFINE 129
KE+D + + ++G G G V +G L A G+ VA+K K + E + EF++E
Sbjct: 8 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE 65
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q H N+++L G + +++ EF+ NG L +L + +F + +++
Sbjct: 66 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV-----IQLVG 120
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI---VIDQTHVTTKV 246
+ G S + A M HRD+ + NIL+N KV+DFG S+F+ D T+ T+ +
Sbjct: 121 MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY-TSSL 179
Query: 247 QGTFG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
G + PE +FT SD +S+G+V+ E+++ G++P
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ +I H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 76 SEEPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 130
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 191 VWSFGILLTELTTKGRVP 208
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 101
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E + L+ +++ +
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGME 159
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 160 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +F+ SDV+SFGVVL EL T + SK I + ++ ++ F
Sbjct: 217 -PESLTESKFSVASDVWSFGVVLYELFT-----YIEKSKSPPAEFMRMIGNDKQGQMIVF 270
Query: 314 LDDQVLKV--------GQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
++LK G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 271 HLIELLKNNGRLPRPDGCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 83 SEEPI-YIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 127/278 (45%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYL 173
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 229 VTE-----GARD-------LISRLLKHNPSQRPMLREV 254
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 146
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 147 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 204 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 263 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 146
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 147 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 204 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 263 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 43/280 (15%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V G VAVK ++ EG + +EF E + +++H +VK G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK---MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 149 LETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
E P+ +V E+ISNG L YL + L L + +V +++L S +
Sbjct: 73 -SKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESHQFI--- 126
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+ + N L++ KV+DFG +++++ DQ + + + PE F +++ KS
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 268 DVYSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEE 326
DV++FG+++ E+ + G+ P L + E VLKV Q
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEV-----------------------VLKVSQGHR 223
Query: 327 IM-------TIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+ TI + C + ++RPT +++ +E ++
Sbjct: 224 LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 364 VWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 364 VWSFGILLTELTTKGRVP 381
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 49/303 (16%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLAD---GRIVAVKKSKIVHEG----KLE 124
+F E + + + + R LGQG G VY+G D G K V+E +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------- 177
EF+NE ++ +VV+LLG + + L+V E +++G L YL E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV- 236
P T + +++A E+A ++YL++ HRD+ + N ++ +T K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 237 IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATG 296
D K ++ PE + G FT SD++SFGVVL E
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE------------------ 224
Query: 297 LAAYFILSMEENRLYDFLDDQVLK-------VGQKEEIM-TIATLATRCLNLNGKRRPTM 348
I S+ E ++QVLK + Q + + L C N K RPT
Sbjct: 225 -----ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 279
Query: 349 KEV 351
E+
Sbjct: 280 LEI 282
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 332 SEEPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 386
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 269 VYSFGVVLVELLT 281
V+SFG++L EL T
Sbjct: 447 VWSFGILLTELTT 459
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI--KLLQYTSQICKGME 131
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HRD+ + NIL+ + K+ DFG +K + D+ K G F Y
Sbjct: 132 YLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT----GQKP----IILTGSKEATGLAAYFILSM 305
PE +F+ SDV+SFGVVL EL T + P + + G+ + + + ++ +
Sbjct: 189 -PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+N D G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 248 LKNNGRLPRPD-----GCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 74 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 128
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 189 VWSFGILLTELTTKGRVP 206
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 84 HFNVNRILGQGGQGTV----YKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H + LG+G G+V Y + + G +VAVKK + E L +F E+ IL + H
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 71
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
N+VK G C L+ E++ G+L YL E L+ +++ +
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGME 129
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYL 253
YL + + HR++ + NIL+ + K+ DFG +K + D+ + K G F Y
Sbjct: 130 YLGTKRYI---HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +F+ SDV+SFGVVL EL T + SK I + ++ ++ F
Sbjct: 187 -PESLTESKFSVASDVWSFGVVLYELFT-----YIEKSKSPPAEFMRMIGNDKQGQMIVF 240
Query: 314 LDDQVLKV--------GQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
++LK G +EI I T C N N +RP+ +++A+ +++I+
Sbjct: 241 HLIELLKNNGRLPRPDGCPDEIYMI---MTECWNNNVNQRPSFRDLALRVDQIR 291
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 72 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 126
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 187 VWSFGILLTELTTKGRVP 204
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 249 SEEPI-YIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 364 VWSFGILLTELTTKGRVP 381
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 83 SEEPI-YIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 127/278 (45%), Gaps = 36/278 (12%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQI 136
A + F + R LG+G G VY + I+A+K K+++ G + EV I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAG 193
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+LSY HS + HRDIK N+LL K+ADFG S V + + GT YL
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYL 176
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE +K D++S GV+ E L G+ P +E Y +S E DF
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 231
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + G ++ L +R L N +RP ++EV
Sbjct: 232 VTE-----GARD-------LISRLLKHNPSQRPMLREV 257
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 51/304 (16%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLAD---GRIVAVKKSKIVHEG----KLE 124
+F E + + + + R LGQG G VY+G D G K V+E +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------- 177
EF+NE ++ +VV+LLG + + L+V E +++G L YL E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVI 237
P T + +++A E+A ++YL++ HRD+ + N ++ +T K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI-Y 181
Query: 238 DQTHVTTKVQGTFG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
+ + +G ++ PE + G FT SD++SFGVVL E
Sbjct: 182 ETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE----------------- 224
Query: 296 GLAAYFILSMEENRLYDFLDDQVLK-------VGQKEEIM-TIATLATRCLNLNGKRRPT 347
I S+ E ++QVLK + Q + + L C N K RPT
Sbjct: 225 ------ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 348 MKEV 351
E+
Sbjct: 279 FLEI 282
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 36/301 (11%)
Query: 68 DRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLAD----GRIVAVKKSK-IVHEGK 122
D + +T++ + + + R +G+G G V++G+ VA+K K +
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV 434
Query: 123 LEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWE 182
E+F+ E + + Q +H ++VKL+G E V ++ E + G L +L Q +F L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKFSLDLA 491
Query: 183 MRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV 242
+ A +++ +L+YL S HRDI + N+L++ K+ DFG S+++ +
Sbjct: 492 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 548
Query: 243 TTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFI 302
+K + ++ PE +FT SDV+ FGV + E I++ G K G+ +
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDV 601
Query: 303 LSMEENRLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELER 357
+ EN G++ + T+ +L T+C + RRP E+ +L
Sbjct: 602 IGRIEN-------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 648
Query: 358 I 358
I
Sbjct: 649 I 649
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 17/221 (7%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML-ADGR---IVAVKKSKIVH-EGKLEEFINE 129
KE+D + + ++G G G V +G L A G+ VA+K K + E + EF++E
Sbjct: 10 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE 67
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q H N+++L G + +++ EF+ NG L +L + +F + +++
Sbjct: 68 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV-----IQLVG 122
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQ 247
+ G S + A M HRD+ + NIL+N KV+DFG S+F+ + + T+ +
Sbjct: 123 MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG 182
Query: 248 GTFG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
G + PE +FT SD +S+G+V+ E+++ G++P
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 74 TTKELDKATDHFNVNRILGQGGQGTVYKGMLAD----GRIVAVKKSK-IVHEGKLEEFIN 128
+T++ + + + R +G+G G V++G+ VA+K K + E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E + + Q +H ++VKL+G E V ++ E + G L +L Q +F L + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKFSLDLASLILYA 117
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+++ +L+YL S HRDI + N+L++ K+ DFG S+++ + +K +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
++ PE +FT SDV+ FGV + E I++ G K G+ ++ EN
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDVIGRIEN 227
Query: 309 RLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELERI 358
G++ + T+ +L T+C + RRP E+ +L I
Sbjct: 228 -------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 36/295 (12%)
Query: 74 TTKELDKATDHFNVNRILGQGGQGTVYKGMLAD----GRIVAVKKSK-IVHEGKLEEFIN 128
+T++ + + + R +G+G G V++G+ VA+K K + E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E + + Q +H ++VKL+G E V ++ E + G L +L Q +F L + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKFSLDLASLILYA 117
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+++ +L+YL S HRDI + N+L++ K+ DFG S+++ +K +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
++ PE +FT SDV+ FGV + E I++ G K G+ ++ EN
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDVIGRIEN 227
Query: 309 RLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELERI 358
G++ + T+ +L T+C + RRP E+ +L I
Sbjct: 228 -------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+GQG GTVY M +A G+ VA+++ + + K E INE++++ + + N+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 150 ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHR 209
+ +V E+++ G+ L D E + + E +L +LHS + HR
Sbjct: 89 VGDELWVVMEYLAGGS----LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 141
Query: 210 DIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDV 269
+IKS NILL + K+ DFG I +Q+ +T V GT ++ PE + K D+
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 270 YSFGVVLVELLTGQKP 285
+S G++ +E++ G+ P
Sbjct: 201 WSLGIMAIEMIEGEPP 216
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 83 SEEPI-YIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 126/263 (47%), Gaps = 25/263 (9%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+GQG GTVY M +A G+ VA+++ + + K E INE++++ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 150 ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHR 209
+ +V E+++ G+ L D E + + E +L +LHS + HR
Sbjct: 88 VGDELWVVMEYLAGGS----LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 140
Query: 210 DIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDV 269
DIKS NILL + K+ DFG I +Q+ + V GT ++ PE + K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 270 YSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMT 329
+S G++ +E++ G+ P + A LY + ++ E++
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRA---------------LYLIATNGTPELQNPEKLSA 244
Query: 330 I-ATLATRCLNLNGKRRPTMKEV 351
I RCL+++ ++R + KE+
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKEL 267
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+GQG GTVY M +A G+ VA+++ + + K E INE++++ + + N+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 150 ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHR 209
+ +V E+++ G+ L D E + + E +L +LHS + HR
Sbjct: 89 VGDELWVVMEYLAGGS----LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 141
Query: 210 DIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDV 269
DIKS NILL + K+ DFG I +Q+ + V GT ++ PE + K D+
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 270 YSFGVVLVELLTGQKP 285
+S G++ +E++ G+ P
Sbjct: 201 WSLGIMAIEMIEGEPP 216
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LGQG G V+ G VA+K K + E F+ E ++ ++ H +V+L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
+ +V E++S G+L +L + ++ L + +A ++A ++Y+ M HRD
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRD 306
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVY 270
+++ NIL+ E KVADFG + I ++ + + PE G+FT KSDV+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 271 SFGVVLVELLT-GQKP 285
SFG++L EL T G+ P
Sbjct: 367 SFGILLTELTTKGRVP 382
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+GQG GTVY M +A G+ VA+++ + + K E INE++++ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 150 ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHR 209
+ +V E+++ G+ L D E + + E +L +LHS + HR
Sbjct: 88 VGDELWVVMEYLAGGS----LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 140
Query: 210 DIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDV 269
DIKS NILL + K+ DFG I +Q+ + V GT ++ PE + K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 270 YSFGVVLVELLTGQKPII 287
+S G++ +E++ G+ P +
Sbjct: 200 WSLGIMAIEMIEGEPPYL 217
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 83 SEEPI-YIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 36/301 (11%)
Query: 68 DRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLAD----GRIVAVKKSK-IVHEGK 122
D + +T++ + + + R +G+G G V++G+ VA+K K +
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV 434
Query: 123 LEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWE 182
E+F+ E + + Q +H ++VKL+G E V ++ E + G L +L Q +F L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKFSLDLA 491
Query: 183 MRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV 242
+ A +++ +L+YL S HRDI + N+L++ K+ DFG S+++ +
Sbjct: 492 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 548
Query: 243 TTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFI 302
+K + ++ PE +FT SDV+ FGV + E I++ G K G+ +
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDV 601
Query: 303 LSMEENRLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELER 357
+ EN G++ + T+ +L T+C + RRP E+ +L
Sbjct: 602 IGRIEN-------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 648
Query: 358 I 358
I
Sbjct: 649 I 649
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 17/220 (7%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML-ADGR---IVAVKKSKIVH-EGKLEEFINE 129
T+E++ + H + +I+G G G V G L G+ VA+K K + E + +F++E
Sbjct: 43 TREIEASRIH--IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSE 100
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRL-RIA 188
I+ Q +H N+++L G + ++V E++ NG+L +L + +F + M+L +
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI---MQLVGML 157
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
V + YL + + HRD+ + N+L++ KV+DFG S+ + D T G
Sbjct: 158 RGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGG 214
Query: 249 TFG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE F+ SDV+SFGVV+ E+L G++P
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 17/221 (7%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLA-DGR---IVAVKKSKIVH-EGKLEEFINE 129
+KE+D + + +++G G G V G L G+ VA+K K + E + +F++E
Sbjct: 1 SKEIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSE 58
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H NV+ L G ++ +++ EF+ NG+L +L + +F + + +
Sbjct: 59 ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI--QLVGMLR 116
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT-TKVQG 248
+A + YL A M HR + + NIL+N KV+DFG S+F+ D + T T G
Sbjct: 117 GIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 173
Query: 249 ---TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE + +FT SDV+S+G+V+ E+++ G++P
Sbjct: 174 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 74 TTKELDKATDHFNVNRILGQGGQGTVYKGMLAD----GRIVAVKKSK-IVHEGKLEEFIN 128
+T++ + + + R +G+G G V++G+ VA+K K + E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E + + Q +H ++VKL+G E V ++ E + G L +L Q ++ L + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 117
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+++ +L+YL S HRDI + N+L++ K+ DFG S+++ + +K +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
++ PE +FT SDV+ FGV + E I++ G K G+ ++ EN
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDVIGRIEN 227
Query: 309 RLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELERI 358
G++ + T+ +L T+C + RRP E+ +L I
Sbjct: 228 -------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 83 SEEPI-YIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 116/220 (52%), Gaps = 17/220 (7%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML-ADGR---IVAVKKSKIVH-EGKLEEFINE 129
T+E++ + H + +I+G G G V G L G+ VA+K K + E + +F++E
Sbjct: 43 TREIEASRIH--IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSE 100
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRL-RIA 188
I+ Q +H N+++L G + ++V E++ NG+L +L + +F + M+L +
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI---MQLVGML 157
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV--IDQTHVTTKV 246
V + YL + + HRD+ + N+L++ KV+DFG S+ + D + TT
Sbjct: 158 RGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG 214
Query: 247 QGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ + PE F+ SDV+SFGVV+ E+L G++P
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 139/316 (43%), Gaps = 38/316 (12%)
Query: 54 LVLQQQLTSSDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGML-ADGRIVAV 112
L QQ LT G + + K + D + +G+G G V+ G L AD +VAV
Sbjct: 86 LSTQQPLTKKSGVVLHRAVPKDKWVLNHED-LVLGEQIGRGNFGEVFSGRLRADNTLVAV 144
Query: 113 KKSKIVHEGKLE-EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH 171
K + L+ +F+ E IL Q +H N+V+L+G C + + +V E + G +L
Sbjct: 145 KSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 204
Query: 172 DQNEEFPLTWEMRLRIAT------EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAK 225
+ RLR+ T + A + YL S + HRD+ + N L+ EK K
Sbjct: 205 TEG--------ARLRVKTLLQMVGDAAAGMEYLESKCCI---HRDLAARNCLVTEKNVLK 253
Query: 226 VADFGTSKFIVIDQTHVTTK--VQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQ 283
++DFG S+ D + + Q + PE G+++ +SDV+SFG++L E +
Sbjct: 254 ISDFGMSREEA-DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS-- 310
Query: 284 KPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGK 343
G + Y LS ++ R +F++ + + L +C
Sbjct: 311 -----------LGASPYPNLSNQQTR--EFVEKGGRLPCPELCPDAVFRLMEQCWAYEPG 357
Query: 344 RRPTMKEVAMELERIQ 359
+RP+ + EL+ I+
Sbjct: 358 QRPSFSTIYQELQSIR 373
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E++S G+L +L + ++ L + +A ++A ++Y+ M H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+ + NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 74 TTKELDKATDHFNVNRILGQGGQGTVYKGMLADGR----IVAVKKSK-IVHEGKLEEFIN 128
+T++ + + + R +G+G G V++G+ VA+K K + E+F+
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E + + Q +H ++VKL+G E V ++ E + G L +L Q ++ L + A
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 119
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+++ +L+YL S HRDI + N+L++ K+ DFG S+++ + +K +
Sbjct: 120 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 176
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
++ PE +FT SDV+ FGV + E I++ G K G+ ++ EN
Sbjct: 177 PIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDVIGRIEN 229
Query: 309 RLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELERI 358
G++ + T+ +L T+C + RRP E+ +L I
Sbjct: 230 -------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 74 TTKELDKATDHFNVNRILGQGGQGTVYKGMLADGR----IVAVKKSK-IVHEGKLEEFIN 128
+T++ + + + R +G+G G V++G+ VA+K K + E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E + + Q +H ++VKL+G E V ++ E + G L +L Q ++ L + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 117
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+++ +L+YL S HRDI + N+L++ K+ DFG S+++ + +K +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
++ PE +FT SDV+ FGV + E I++ G K G+ ++ EN
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDVIGRIEN 227
Query: 309 RLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELERI 358
G++ + T+ +L T+C + RRP E+ +L I
Sbjct: 228 -------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 82 TDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEGKLE-EFINEVVILSQIN 137
+D + + ILG GG V+ L D R VAVK ++ + + F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 138 HRNVVKLLGCC-LETE---VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
H +V + ET +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFG 251
+L++ H I HRD+K NIL++ KV DFG ++ I V T V GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 18/223 (8%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLAD---GRIVAVKKSKIVHEG----KLE 124
++ E + + + + R LGQG G VY+G D G K V+E +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------- 177
EF+NE ++ +VV+LLG + + L+V E +++G L YL E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV- 236
P T + +++A E+A ++YL++ HRD+ + N ++ +T K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 237 IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVEL 279
D K ++ PE + G FT SD++SFGVVL E+
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 138/315 (43%), Gaps = 36/315 (11%)
Query: 54 LVLQQQLTSSDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGML-ADGRIVAV 112
L QQ LT G + + K + D + +G+G G V+ G L AD +VAV
Sbjct: 86 LSTQQPLTKKSGVVLHRAVPKDKWVLNHED-LVLGEQIGRGNFGEVFSGRLRADNTLVAV 144
Query: 113 KKSKIVHEGKLE-EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH 171
K + L+ +F+ E IL Q +H N+V+L+G C + + +V E + G +L
Sbjct: 145 KSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 204
Query: 172 DQNEEFPLTWEMRLRIAT------EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAK 225
+ RLR+ T + A + YL S + HRD+ + N L+ EK K
Sbjct: 205 TEG--------ARLRVKTLLQMVGDAAAGMEYLESKCCI---HRDLAARNCLVTEKNVLK 253
Query: 226 VADFGTSKFIVIDQTHVTTKV-QGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQK 284
++DFG S+ + + Q + PE G+++ +SDV+SFG++L E +
Sbjct: 254 ISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS--- 310
Query: 285 PIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKR 344
G + Y LS ++ R +F++ + + L +C +
Sbjct: 311 ----------LGASPYPNLSNQQTR--EFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQ 358
Query: 345 RPTMKEVAMELERIQ 359
RP+ + EL+ I+
Sbjct: 359 RPSFSTIYQELQSIR 373
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 13/202 (6%)
Query: 91 LGQGGQGTVYKG---MLADGRIVAVKKSKI-VHEGKLEEFINEVVILSQINHRNVVKLLG 146
LG G G+V +G M VA+K K + EE + E I+ Q+++ +V+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
C + E +LV E G L ++L + EE P++ + +V+ + YL
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEKN---F 457
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQFT 264
HR++ + N+LL ++ AK++DFG SK + D ++ T + G + + PE +F+
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 265 DKSDVYSFGVVLVELLT-GQKP 285
+SDV+S+GV + E L+ GQKP
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKP 539
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 85 FNVNRILGQGGQGTVYK-GMLADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F + R LG G G V+ +GR A+K K +V ++E +E ++LS + H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
++++ G + + ++ ++I G LF L +++ FP + A EV +L YLHS
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNP--VAKFYAAEVCLALEYLHS 124
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRS 260
I +RD+K NILL++ K+ DFG +K++ VT + GT Y+ PE +
Sbjct: 125 KD---IIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEVVST 177
Query: 261 GQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLK 320
+ D +SFG+++ E+L G P ++ + Y + E R F ++ V
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPFY-----DSNTMKTYEKILNAELRFPPFFNEDVKD 232
Query: 321 VGQKEEIMTIATLATRCLNL-NG----KRRPTMKEVAME 354
+ + + L+ R NL NG K P KEV E
Sbjct: 233 LLSR---LITRDLSQRLGNLQNGTEDVKNHPWFKEVVWE 268
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E+++ G+L +L + ++ L + ++ ++A ++Y+ M H
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 195 VWSFGILLTELTTKGRVP 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 74 TTKELDKATDHFNVNRILGQGGQGTVYKGMLADGR----IVAVKKSK-IVHEGKLEEFIN 128
+T++ + + + R +G+G G V++G+ VA+K K + E+F+
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E + + Q +H ++VKL+G E V ++ E + G L +L Q ++ L + A
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 120
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+++ +L+YL S HRDI + N+L++ K+ DFG S+++ + +K +
Sbjct: 121 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
++ PE +FT SDV+ FGV + E I++ G K G+ ++ EN
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDVIGRIEN 230
Query: 309 RLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELERI 358
G++ + T+ +L T+C + RRP E+ +L I
Sbjct: 231 -------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VA+K K G + E F+ E I+ ++ H +V+L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E+++ G+L +L D E L + +A +VA ++Y+ M H
Sbjct: 74 SEEPI-YIVTEYMNKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIER---MNYIH 128
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD++S NIL+ K+ADFG ++ I ++ + + PE G+FT KSD
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 269 VYSFGVVLVELLT-GQKPIILTGSKE 293
V+SFG++L EL+T G+ P ++E
Sbjct: 189 VWSFGILLTELVTKGRVPYPGMNNRE 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 74 TTKELDKATDHFNVNRILGQGGQGTVYKGMLADGR----IVAVKKSK-IVHEGKLEEFIN 128
+T++ + + + R +G+G G V++G+ VA+K K + E+F+
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E + + Q +H ++VKL+G E V ++ E + G L +L Q ++ L + A
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 122
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+++ +L+YL S HRDI + N+L++ K+ DFG S+++ + +K +
Sbjct: 123 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
++ PE +FT SDV+ FGV + E I++ G K G+ ++ EN
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDVIGRIEN 232
Query: 309 RLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELERI 358
G++ + T+ +L T+C + RRP E+ +L I
Sbjct: 233 -------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 129/285 (45%), Gaps = 35/285 (12%)
Query: 90 ILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
+LG+G G K + G ++ +K+ E F+ EV ++ + H NV+K +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + + E+I GTL + + ++P W R+ A ++A ++YLHS M I H
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYP--WSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-------------TTKVQGTFGYLDP 255
RD+ S N L+ E VADFG ++ +V ++T V G ++ P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 256 EYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN-RLYDFL 314
E + +K DV+SFG+VL E++ G A Y +M+ + FL
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII---------GRVNAD--PDYLPRTMDFGLNVRGFL 240
Query: 315 DDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
D + + + RC +L+ ++RP+ ++ LE ++
Sbjct: 241 D----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 164/360 (45%), Gaps = 45/360 (12%)
Query: 19 NYEGGYR-CITPKRKV--YIIKREDIKLK--EKFFKRNGGLVLQQQLTSSDGSIDRCKLF 73
NY G Y C++ + KV Y I KL E+ + N +++ T +DG R L
Sbjct: 111 NYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTDADGLCTR--LI 168
Query: 74 TTKELD---KATDHFNVN---------RILGQGGQGTVYKGMLADGRIVAVKKSKIVHEG 121
K ++ A D F + ++L G+G ML D R V I ++
Sbjct: 169 KPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA 228
Query: 122 KLEEFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLT 180
+ F+ E +++Q+ H N+V+LLG +E + L +V E+++ G+L YL + L
Sbjct: 229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LG 287
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQT 240
+ L+ + +V ++ YL HRD+ + N+L++E AKV+DFG +K Q
Sbjct: 288 GDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344
Query: 241 HVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLAA 299
V+ T PE R +F+ KSDV+SFG++L E+ + G+ P K+
Sbjct: 345 TGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV----- 395
Query: 300 YFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+ +E+ D D G + + C +L+ RPT ++ +LE I+
Sbjct: 396 --VPRVEKGYKMDAPD------GCPPAVYDV---MKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 74 TTKELDKATDHFNVNRILGQGGQGTVYKGMLADGR----IVAVKKSK-IVHEGKLEEFIN 128
+T++ + + + R +G+G G V++G+ VA+K K + E+F+
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E + + Q +H ++VKL+G E V ++ E + G L +L Q ++ L + A
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 145
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+++ +L+YL S HRDI + N+L++ K+ DFG S+++ + +K +
Sbjct: 146 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 202
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN 308
++ PE +FT SDV+ FGV + E I++ G K G+ ++ EN
Sbjct: 203 PIKWMAPESINFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDVIGRIEN 255
Query: 309 RLYDFLDDQVLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELERI 358
G++ + T+ +L T+C + RRP E+ +L I
Sbjct: 256 -------------GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 89 RILGQGGQGTVYKGMLAD---GRIVAVKKSKIVHEG----KLEEFINEVVILSQINHRNV 141
R LGQG G VY+G D G K V+E + EF+NE ++ +V
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF-------PLTWEMRLRIATEVAGS 194
V+LLG + + L+V E +++G L YL E P T + +++A E+A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKVQGTFGYL 253
++YL++ HRD+ + N ++ +T K+ DFG ++ I D K ++
Sbjct: 142 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE + G FT SD++SFGVVL E I S+ E
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWE-----------------------ITSLAEQPYQGL 235
Query: 314 LDDQVLK-------VGQKEEIM-TIATLATRCLNLNGKRRPTMKEV 351
++QVLK + Q + + L C N K RPT E+
Sbjct: 236 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 281
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 109/224 (48%), Gaps = 25/224 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D N+ + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF-P--------LTWEM 183
I H NVV LLG C + PL+V EF G L YL + EF P LT E
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 184 RLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT 243
+ + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D +V
Sbjct: 146 LIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR 202
Query: 244 T-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LGQG G V+ G VA+K K G + E F+ E ++ ++ H +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
E + +V E+++ G+L +L + ++ L + ++ ++A ++Y+ M H
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+ E KVADFG ++ I ++ + + PE G+FT KSD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L EL T G+ P
Sbjct: 195 VWSFGILLTELTTKGRVP 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 85 FNVNRILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVK 143
F+V LG+G G+VYK + + G+IVA+K+ + E L+E I E+ I+ Q + +VVK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSPHVVK 88
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
G + +V E+ G++ + +N+ LT + I L YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQSTLKGLEYLHFMRK 146
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQF 263
+ HRDIK+ NILLN + AK+ADFG + + D V GT ++ PE + +
Sbjct: 147 I---HRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 264 TDKSDVYSFGVVLVELLTGQKP 285
+D++S G+ +E+ G+ P
Sbjct: 203 NCVADIWSLGITAIEMAEGKPP 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 82 TDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEGKLE-EFINEVVILSQIN 137
+D + + ILG GG V+ L D R VAVK ++ + + F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 138 HRNVVKLLGCC-LETE---VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
H +V + ET +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT--TKVQGTFG 251
+L++ H I HRD+K NI+++ KV DFG ++ I VT V GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 82 TDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEGKLE-EFINEVVILSQIN 137
+D + + ILG GG V+ L D R VAVK ++ + + F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 138 HRNVVKLLGCC-LETE---VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
H +V + ET +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT--TKVQGTFG 251
+L++ H I HRD+K NI+++ KV DFG ++ I VT V GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 87 VNRILGQGGQGTVYKGMLA-DGR---IVAVKKSKIVH-EGKLEEFINEVVILSQINHRNV 141
+ R++G G G V G L G+ VA+K K+ + E + +F+ E I+ Q +H N+
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSA 201
+ L G +++ ++V E++ NG+L +L + +F + + + ++ + YL
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI--QLVGMLRGISAGMKYL--- 140
Query: 202 ASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFR 259
+ M HRD+ + NIL+N KV+DFG S+ + D T G + PE
Sbjct: 141 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 260 SGQFTDKSDVYSFGVVLVELLT-GQKP 285
+FT SDV+S+G+V+ E+++ G++P
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 132/286 (46%), Gaps = 43/286 (15%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGR----IVAVK---KSKIVHEGKLEEFINEVVILSQIN 137
F++ R LG+G G VY LA R I+A+K K+++ G + EV I S +
Sbjct: 14 FDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAGS 194
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A +
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANA 124
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
LSY HS + HRDIK N+LL K+ADFG S V + T + GT YL
Sbjct: 125 LSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLP 178
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFL 314
PE +K D++S GV+ E L G P + T Y +S E DF+
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-----EAHTYQETYRRISRVEFTFPDFV 233
Query: 315 DDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQA 360
+ G ++ L +R L N +R T+ EV +E I+A
Sbjct: 234 TE-----GARD-------LISRLLKHNASQRLTLAEV-LEHPWIKA 266
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 109/224 (48%), Gaps = 25/224 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D N+ + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF-P--------LTWEM 183
I H NVV LLG C + PL+V EF G L YL + EF P LT E
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 184 RLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT 243
+ + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D +V
Sbjct: 146 LICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 244 T-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 143/308 (46%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVYK----GMLAD--GRI--VAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V G+ D R+ VAVK K E L + I+E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH-------------DQNEEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL N E L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
+ + + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV+L E+ T G +
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------------LGGS 251
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + + T + C + +RPT K++
Sbjct: 252 PYPGVPVEE--LF-----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
Query: 354 ELERIQAL 361
+L+RI AL
Sbjct: 305 DLDRIVAL 312
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 87 VNRILGQGGQGTVYKGMLA--DGRI--VAVKKSKIVHEGK--LEEFINEVVILSQINHRN 140
+ +ILG+G G+V +G L DG VAVK K+ + + +EEF++E + +H N
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 141 VVKLLGCCLETEV-----PLLVYEFISNGTLFQY-LHDQNEEFP--LTWEMRLRIATEVA 192
V++LLG C+E P+++ F+ G L Y L+ + E P + + L+ ++A
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKV-QGTFG 251
+ YL + + HRD+ + N +L + T VADFG SK I + ++ +
Sbjct: 158 LGMEYLSNRNFL---HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
++ E +T KSDV++FGV + E+ T G+ Y ++ + +Y
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT-------------RGMTPY--PGVQNHEMY 259
Query: 312 DFLDDQVLKVGQKEEIMT-IATLATRCLNLNGKRRPTMKEVAMELERIQALQKDI 365
D+L ++ Q E+ + + + C + RPT + ++LE++ D+
Sbjct: 260 DYL-LHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDV 313
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGR----IVAVKKSK-IVHEGKLEEFINEVVILSQIN 137
+ + R +G+G G V++G+ VA+K K + E+F+ E + + Q +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
H ++VKL+G E V ++ E + G L +L Q ++ L + A +++ +L+Y
Sbjct: 67 HPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 123
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
L S HRDI + N+L++ K+ DFG S+++ + +K + ++ PE
Sbjct: 124 LESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQ 317
+FT SDV+ FGV + E I++ G K G+ ++ EN
Sbjct: 181 INFRRFTSASDVWMFGVCMWE-------ILMHGVKPFQGVKNNDVIGRIEN--------- 224
Query: 318 VLKVGQKEEIM-----TIATLATRCLNLNGKRRPTMKEVAMELERI 358
G++ + T+ +L T+C + RRP E+ +L I
Sbjct: 225 ----GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML-ADGR---IVAVKKSKIVHEGK-LEEFINE 129
KE+D + + +++G G G V G L G+ VA+K K + K +F++E
Sbjct: 2 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 59
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N++ L G + + +++ E++ NG+L +L + F + +++
Sbjct: 60 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV-----IQLVG 114
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML-ADGR---IVAVKKSKIVHEGK-LEEFINE 129
KE+D + + +++G G G V G L G+ VA+K K + K +F++E
Sbjct: 8 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 65
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N++ L G + + +++ E++ NG+L +L + F + +++
Sbjct: 66 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV-----IQLVG 120
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 26/267 (9%)
Query: 95 GQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVP 154
G+G ML D R V I ++ + F+ E +++Q+ H N+V+LLG +E +
Sbjct: 21 GKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 80
Query: 155 L-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKS 213
L +V E+++ G+L YL + L + L+ + +V ++ YL HRD+ +
Sbjct: 81 LYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAA 136
Query: 214 TNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFG 273
N+L++E AKV+DFG +K Q V+ T PE R F+ KSDV+SFG
Sbjct: 137 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKSDVWSFG 192
Query: 274 VVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT 332
++L E+ + G+ P K+ + +E+ D D V E+M
Sbjct: 193 ILLWEIYSFGRVPYPRIPLKDV-------VPRVEKGYKMDAPDGCPPAV---YEVM---- 238
Query: 333 LATRCLNLNGKRRPTMKEVAMELERIQ 359
C +L+ RP+ ++ +LE I+
Sbjct: 239 --KNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGML-ADGR---IVAVKKSKIVHEGK-LEEFINE 129
KE+D + + +++G G G V G L G+ VA+K K + K +F++E
Sbjct: 23 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 80
Query: 130 VVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
I+ Q +H N++ L G + + +++ E++ NG+L +L + F + +++
Sbjct: 81 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV-----IQLVG 135
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ G S + + M HRD+ + NIL+N KV+DFG S+ + D T G
Sbjct: 136 MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 195
Query: 250 FG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 196 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 29/271 (10%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
+G+G G V ML D R V I ++ + F+ E +++Q+ H N+V+LLG +E
Sbjct: 29 IGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 151 TEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHR 209
+ L +V E+++ G+L YL + L + L+ + +V ++ YL HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 210 DIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDV 269
D+ + N+L++E AKV+DFG +K Q V+ T PE R +F+ KSDV
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDV 197
Query: 270 YSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIM 328
+SFG++L E+ + G+ P K+ + +E+ D D V E+M
Sbjct: 198 WSFGILLWEIYSFGRVPYPRIPLKDV-------VPRVEKGYKMDAPDGCPPAV---YEVM 247
Query: 329 TIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
C +L+ RP+ ++ +LE I+
Sbjct: 248 ------KNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 39/309 (12%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYK----GMLADGRI--VAVKKSK-IVH 119
ID +L ++ + ++ + LG G G V + G+ + + VAVK K H
Sbjct: 22 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 81
Query: 120 EGKLEEFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH------- 171
+ E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 82 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 141
Query: 172 DQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGT 231
D+ + PL L +++VA +++L AS HRD+ + N+LL + AK+ DFG
Sbjct: 142 DKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 198
Query: 232 SKFIVIDQTH-VTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT---GQKPII 287
++ I+ D + V + ++ PE +T +SDV+S+G++L E+ + P I
Sbjct: 199 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 258
Query: 288 LTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPT 347
L SK Y + D I ++ C L RPT
Sbjct: 259 LVNSK-----------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 301
Query: 348 MKEVAMELE 356
+++ L+
Sbjct: 302 FQQICSFLQ 310
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 58/311 (18%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG---------RI--VAVKKSKI-VHEGKLEEFINEV 130
D + + LG+G G V +LA+ R+ VAVK K E L + I+E+
Sbjct: 13 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69
Query: 131 VILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH-------------DQNEE 176
++ I H+N++ LLG C + ++ E+ S G L +YL N E
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 129
Query: 177 FPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI- 235
L+ + + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
ID TT + ++ PE +T +SDV+SFGV+L E+ T
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------------L 233
Query: 296 GLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKE 350
G + Y + +EE L+ ++LK G + + + T + C + +RPT K+
Sbjct: 234 GGSPYPGVPVEE--LF-----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 286
Query: 351 VAMELERIQAL 361
+ +L+RI AL
Sbjct: 287 LVEDLDRIVAL 297
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 39/309 (12%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYK----GMLADGRI--VAVKKSK-IVH 119
ID +L ++ + ++ + LG G G V + G+ + + VAVK K H
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 120 EGKLEEFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH------- 171
+ E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149
Query: 172 DQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGT 231
D+ + PL L +++VA +++L AS HRD+ + N+LL + AK+ DFG
Sbjct: 150 DKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 206
Query: 232 SKFIVIDQTH-VTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT---GQKPII 287
++ I+ D + V + ++ PE +T +SDV+S+G++L E+ + P I
Sbjct: 207 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 266
Query: 288 LTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPT 347
L SK Y + D I ++ C L RPT
Sbjct: 267 LVNSK-----------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 309
Query: 348 MKEVAMELE 356
+++ L+
Sbjct: 310 FQQICSFLQ 318
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 89 RILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
++L G+G ML D R V I ++ + F+ E +++Q+ H N+V+LLG
Sbjct: 9 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 149 LETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
+E + L +V E+++ G+L YL + L + L+ + +V ++ YL
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FV 124
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+ + N+L++E AKV+DFG +K Q V+ T PE R +F+ KS
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 180
Query: 268 DVYSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEE 326
DV+SFG++L E+ + G+ P K+ + +E+ D D V E
Sbjct: 181 DVWSFGILLWEIYSFGRVPYPRIPLKDV-------VPRVEKGYKMDAPDGCPPAV---YE 230
Query: 327 IMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
+M C +L+ RP+ ++ +LE I+
Sbjct: 231 VM------KNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 58/311 (18%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG---------RI--VAVKKSKI-VHEGKLEEFINEV 130
D + + LG+G G V +LA+ R+ VAVK K E L + I+E+
Sbjct: 28 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 131 VILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH-------------DQNEE 176
++ I H+N++ LLG C + ++ E+ S G L +YL N E
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 144
Query: 177 FPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI- 235
L+ + + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
ID TT + ++ PE +T +SDV+SFGV+L E+ T
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------------L 248
Query: 296 GLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKE 350
G + Y + +EE L+ ++LK G + + + T + C + +RPT K+
Sbjct: 249 GGSPYPGVPVEE--LF-----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 301
Query: 351 VAMELERIQAL 361
+ +L+RI AL
Sbjct: 302 LVEDLDRIVAL 312
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 58/311 (18%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG---------RI--VAVKKSKI-VHEGKLEEFINEV 130
D + + LG+G G V +LA+ R+ VAVK K E L + I+E+
Sbjct: 20 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 76
Query: 131 VILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH-------------DQNEE 176
++ I H+N++ LLG C + ++ E+ S G L +YL N E
Sbjct: 77 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 136
Query: 177 FPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI- 235
L+ + + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 193
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
ID TT + ++ PE +T +SDV+SFGV+L E+ T
Sbjct: 194 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------------L 240
Query: 296 GLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKE 350
G + Y + +EE L+ ++LK G + + + T + C + +RPT K+
Sbjct: 241 GGSPYPGVPVEE--LF-----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 293
Query: 351 VAMELERIQAL 361
+ +L+RI AL
Sbjct: 294 LVEDLDRIVAL 304
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 58/311 (18%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG---------RI--VAVKKSKI-VHEGKLEEFINEV 130
D + + LG+G G V +LA+ R+ VAVK K E L + I+E+
Sbjct: 21 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 77
Query: 131 VILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH-------------DQNEE 176
++ I H+N++ LLG C + ++ E+ S G L +YL N E
Sbjct: 78 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 137
Query: 177 FPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI- 235
L+ + + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 194
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
ID TT + ++ PE +T +SDV+SFGV+L E+ T
Sbjct: 195 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------------L 241
Query: 296 GLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKE 350
G + Y + +EE L+ ++LK G + + + T + C + +RPT K+
Sbjct: 242 GGSPYPGVPVEE--LF-----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 294
Query: 351 VAMELERIQAL 361
+ +L+RI AL
Sbjct: 295 LVEDLDRIVAL 305
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 58/311 (18%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG---------RI--VAVKKSKI-VHEGKLEEFINEV 130
D + + LG+G G V +LA+ R+ VAVK K E L + I+E+
Sbjct: 17 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 73
Query: 131 VILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH-------------DQNEE 176
++ I H+N++ LLG C + ++ E+ S G L +YL N E
Sbjct: 74 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 177 FPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI- 235
L+ + + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 190
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
ID TT + ++ PE +T +SDV+SFGV+L E+ T
Sbjct: 191 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------------L 237
Query: 296 GLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKE 350
G + Y + +EE L+ ++LK G + + + T + C + +RPT K+
Sbjct: 238 GGSPYPGVPVEE--LF-----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 290
Query: 351 VAMELERIQAL 361
+ +L+RI AL
Sbjct: 291 LVEDLDRIVAL 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 58/311 (18%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG---------RI--VAVKKSKI-VHEGKLEEFINEV 130
D + + LG+G G V +LA+ R+ VAVK K E L + I+E+
Sbjct: 28 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 131 VILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH-------------DQNEE 176
++ I H+N++ LLG C + ++ E+ S G L +YL N E
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 177 FPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI- 235
L+ + + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
ID TT + ++ PE +T +SDV+SFGV+L E+ T
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------------L 248
Query: 296 GLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKE 350
G + Y + +EE L+ ++LK G + + + T + C + +RPT K+
Sbjct: 249 GGSPYPGVPVEE--LF-----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 301
Query: 351 VAMELERIQAL 361
+ +L+RI AL
Sbjct: 302 LVEDLDRIVAL 312
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 58/311 (18%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG---------RI--VAVKKSKI-VHEGKLEEFINEV 130
D + + LG+G G V +LA+ R+ VAVK K E L + I+E+
Sbjct: 28 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 131 VILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH-------------DQNEE 176
++ I H+N++ LLG C + ++ E+ S G L +YL N E
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 177 FPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI- 235
L+ + + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
ID TT + ++ PE +T +SDV+SFGV+L E+ T
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------------L 248
Query: 296 GLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKE 350
G + Y + +EE L+ ++LK G + + + T + C + +RPT K+
Sbjct: 249 GGSPYPGVPVEE--LF-----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 301
Query: 351 VAMELERIQAL 361
+ +L+RI AL
Sbjct: 302 LVEDLDRIVAL 312
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 131/286 (45%), Gaps = 43/286 (15%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGR----IVAVK---KSKIVHEGKLEEFINEVVILSQIN 137
F++ R LG+G G VY LA R I+A+K K+++ G + EV I S +
Sbjct: 14 FDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAGS 194
H N+++L G + L+ E+ GT++ Q L +E+ T+ TE+A +
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANA 124
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
LSY HS + HRDIK N+LL K+ADFG S V + + GT YL
Sbjct: 125 LSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLP 178
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFL 314
PE +K D++S GV+ E L G P + T Y +S E DF+
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-----EAHTYQETYRRISRVEFTFPDFV 233
Query: 315 DDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQA 360
+ G ++ L +R L N +R T+ EV +E I+A
Sbjct: 234 TE-----GARD-------LISRLLKHNASQRLTLAEV-LEHPWIKA 266
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 108/227 (47%), Gaps = 28/227 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D N+ + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 86
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF-----P-------LT 180
I H NVV LLG C + PL+V EF G L YL + EF P LT
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQT 240
E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 241 HVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 18/223 (8%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLAD---GRIVAVKKSKIVHEG----KLE 124
++ E + + + + R LGQG G VY+G D G K V+E +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------- 177
EF+NE ++ +VV+LLG + + L+V E +++G L YL E
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV- 236
P T + +++A E+A ++YL++ HR++ + N ++ +T K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 237 IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVEL 279
D K ++ PE + G FT SD++SFGVVL E+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 18/225 (8%)
Query: 72 LFTTKELDKATDHFNVNRILGQGGQGTVYKGMLAD---GRIVAVKKSKIVHEG----KLE 124
++ E + + + + R LGQG G VY+G D G K V+E +
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 66
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------- 177
EF+NE ++ +VV+LLG + + L+V E +++G L YL E
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV- 236
P T + +++A E+A ++YL++ HR++ + N ++ +T K+ DFG ++ I
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 237 IDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
D K ++ PE + G FT SD++SFGVVL E+ +
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 107/199 (53%), Gaps = 13/199 (6%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 149 LETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
T+ P+ ++ E++ NG+L +L + LT L +A ++A ++++ +
Sbjct: 79 --TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI--- 132
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KS
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 268 DVYSFGVVLVELLT-GQKP 285
DV+SFG++L E++T G+ P
Sbjct: 193 DVWSFGILLTEIVTHGRIP 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 78 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 132
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L E++T G+ P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 80 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 134
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L E++T G+ P
Sbjct: 195 VWSFGILLTEIVTHGRIP 212
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 87 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 141
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 269 VYSFGVVLVELLT 281
V+SFG++L E++T
Sbjct: 202 VWSFGILLTEIVT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 86 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 140
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 269 VYSFGVVLVELLT 281
V+SFG++L E++T
Sbjct: 201 VWSFGILLTEIVT 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 78 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 132
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L E++T G+ P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 38/221 (17%)
Query: 90 ILGQGGQGTVYKGMLA-DGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
+LGQG G V K A D R A+KK + E KL ++EV++L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 149 LETE---VPL----------LVYEFISNGTLFQYLHDQN--EEFPLTWEMRLRIATEVAG 193
LE P+ + E+ NGTL+ +H +N ++ W R+ ++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-------FIVIDQTHVT--- 243
+LSY+HS I HRD+K NI ++E K+ DFG +K + +D ++
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 244 ---TKVQGTFGYLDPEYFR-SGQFTDKSDVYSFGVVLVELL 280
T GT Y+ E +G + +K D+YS G++ E++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 84 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 138
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 269 VYSFGVVLVELLT 281
V+SFG++L E++T
Sbjct: 199 VWSFGILLTEIVT 211
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 78 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 132
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I + + + PE G FT KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L E++T G+ P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 83 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 137
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L E++T G+ P
Sbjct: 198 VWSFGILLTEIVTHGRIP 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 58/311 (18%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG---------RI--VAVKKSKI-VHEGKLEEFINEV 130
D + + LG+G G V +LA+ R+ VAVK K E L + I+E+
Sbjct: 69 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 125
Query: 131 VILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH-------------DQNEE 176
++ I H+N++ LLG C + ++ E+ S G L +YL N E
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 177 FPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI- 235
L+ + + A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 242
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
ID TT + ++ PE +T +SDV+SFGV+L E+ T
Sbjct: 243 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------------L 289
Query: 296 GLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKE 350
G + Y + +EE L+ ++LK G + + + T + C + +RPT K+
Sbjct: 290 GGSPYPGVPVEE--LF-----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 342
Query: 351 VAMELERIQAL 361
+ +L+RI AL
Sbjct: 343 LVEDLDRIVAL 353
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 107/199 (53%), Gaps = 13/199 (6%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 149 LETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
T+ P+ ++ E++ NG+L +L + LT L +A ++A ++++ +
Sbjct: 73 --TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI--- 126
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KS
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 268 DVYSFGVVLVELLT-GQKP 285
DV+SFG++L E++T G+ P
Sbjct: 187 DVWSFGILLTEIVTHGRIP 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 78 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 132
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L E++T G+ P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 84 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 138
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L E++T G+ P
Sbjct: 199 VWSFGILLTEIVTHGRIP 216
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH-SEHRALMSELKILI 87
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF----P-------LTW 181
I H NVV LLG C + PL+V EF G L YL + EF P LT
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 182 EMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTH 241
E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 148 EHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 242 VTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 88 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 142
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RD+++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 269 VYSFGVVLVELLT 281
V+SFG++L E++T
Sbjct: 203 VWSFGILLTEIVT 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 82 TDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEGKLE-EFINEVVILSQIN 137
+D + + ILG GG V+ L R VAVK ++ + + F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 138 HRNVVKLLGCC-LETE---VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
H +V + ET +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT--TKVQGTFG 251
+L++ H I HRD+K NI+++ KV DFG ++ I VT V GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 61 TSSDGSIDRCKLFTTK-ELDKAT----------DHFNVNRILGQGGQGTVYKGMLADGR- 108
TS+DG +L T K EL A ++F + ++LG G G V+ G
Sbjct: 21 TSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHD 80
Query: 109 ------IVAVKKSKIVHEGKLEEFIN-EVVILSQINHRNVVKLLGCCLETEVPL-LVYEF 160
+ +KK+ IV + K E E +L I + L +TE L L+ ++
Sbjct: 81 TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDY 140
Query: 161 ISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNE 220
I+ G LF +L Q E F E+++ + E+ +L +LH + I +RDIK NILL+
Sbjct: 141 INGGELFTHL-SQRERF-TEHEVQIYVG-EIVLALEHLHK---LGIIYRDIKLENILLDS 194
Query: 221 KYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFT-DKS-DVYSFGVVLVE 278
+ DFG SK V D+T GT Y+ P+ R G DK+ D +S GV++ E
Sbjct: 195 NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 254
Query: 279 LLTGQKPIILTGSKEATGLAAYFILSME 306
LLTG P + G K + + IL E
Sbjct: 255 LLTGASPFTVDGEKNSQAEISRRILKSE 282
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 91 LGQGGQGTVYKGML--ADGRIVAV-----KKSKIVHEGKLEEFINEVVILSQINHRNVVK 143
LG G G V +G G+ V+V K + +++FI EV + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
L G L + +V E G+L L F L R A +VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR- 141
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG--TFGYLDPEYFRSG 261
HRD+ + N+LL + K+ DFG + + + H + F + PE ++
Sbjct: 142 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 262 QFTDKSDVYSFGVVLVELLT-GQKPII-LTGSK 292
F+ SD + FGV L E+ T GQ+P I L GS+
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 232
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 91 LGQGGQGTVYKGML--ADGRIVAV-----KKSKIVHEGKLEEFINEVVILSQINHRNVVK 143
LG G G V +G G+ V+V K + +++FI EV + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
L G L + +V E G+L L F L R A +VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR- 135
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG--TFGYLDPEYFRSG 261
HRD+ + N+LL + K+ DFG + + + H + F + PE ++
Sbjct: 136 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 262 QFTDKSDVYSFGVVLVELLT-GQKPII-LTGSK 292
F+ SD + FGV L E+ T GQ+P I L GS+
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 226
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 144/328 (43%), Gaps = 59/328 (17%)
Query: 66 SIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGML--ADGR----IVAVKKSK-IV 118
S+D K+ + + + + + LG+G G V K GR VAVK K
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH------- 171
+L + ++E +L Q+NH +V+KL G C + LL+ E+ G+L +L
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 172 --------------DQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNIL 217
D +E LT + A +++ + YL A M + HRD+ + NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 218 LNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQFTDKSDVYSFGVV 275
+ E K++DFG S+ + + ++V + QG ++ E +T +SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 276 LVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIM-----TI 330
L E++T G G+ RL++ +LK G + E +
Sbjct: 242 LWEIVT-------LGGNPYPGIPP--------ERLFN-----LLKTGHRMERPDNCSEEM 281
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERI 358
L +C +RP +++ +LE++
Sbjct: 282 YRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 91 LGQGGQGTVYKGML--ADGRIVAV-----KKSKIVHEGKLEEFINEVVILSQINHRNVVK 143
LG G G V +G G+ V+V K + +++FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
L G L + +V E G+L L F L R A +VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR- 131
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG--TFGYLDPEYFRSG 261
HRD+ + N+LL + K+ DFG + + + H + F + PE ++
Sbjct: 132 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 262 QFTDKSDVYSFGVVLVELLT-GQKPII-LTGSK 292
F+ SD + FGV L E+ T GQ+P I L GS+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 91 LGQGGQGTVYKGML--ADGRIVAV-----KKSKIVHEGKLEEFINEVVILSQINHRNVVK 143
LG G G V +G G+ V+V K + +++FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
L G L + +V E G+L L F L R A +VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR- 131
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG--TFGYLDPEYFRSG 261
HRD+ + N+LL + K+ DFG + + + H + F + PE ++
Sbjct: 132 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 262 QFTDKSDVYSFGVVLVELLT-GQKPII-LTGSK 292
F+ SD + FGV L E+ T GQ+P I L GS+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 24/220 (10%)
Query: 87 VNRILGQGGQGTVYKG------MLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRN 140
+ R LG+G G V+ D +VAVK K ++F E +L+ + H +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF-------------PLTWEMRLRI 187
+VK G C + + ++V+E++ +G L ++L + L L I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQTHVTTKV 246
A+++A + YL AS HRD+ + N L+ K+ DFG S+ + D V
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 247 QGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
++ PE +FT +SDV+SFGV+L E+ T G++P
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 91 LGQGGQGTVYKGML--ADGRIVAV-----KKSKIVHEGKLEEFINEVVILSQINHRNVVK 143
LG G G V +G G+ V+V K + +++FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
L G L + +V E G+L L F L R A +VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR- 131
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG--TFGYLDPEYFRSG 261
HRD+ + N+LL + K+ DFG + + + H + F + PE ++
Sbjct: 132 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 262 QFTDKSDVYSFGVVLVELLT-GQKPII-LTGSK 292
F+ SD + FGV L E+ T GQ+P I L GS+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 91 LGQGGQGTVYKGML--ADGRIVAV-----KKSKIVHEGKLEEFINEVVILSQINHRNVVK 143
LG G G V +G G+ V+V K + +++FI EV + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
L G L + +V E G+L L F L R A +VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR- 141
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG--TFGYLDPEYFRSG 261
HRD+ + N+LL + K+ DFG + + + H + F + PE ++
Sbjct: 142 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 262 QFTDKSDVYSFGVVLVELLT-GQKPII-LTGSK 292
F+ SD + FGV L E+ T GQ+P I L GS+
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 232
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 108/228 (47%), Gaps = 29/228 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 87
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF------P-------L 179
I H NVV LLG C + PL+V EF G L YL + EF P L
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
T E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 148 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 204
Query: 240 THVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 108/228 (47%), Gaps = 29/228 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 76
Query: 135 QINHR-NVVKLLGCCLETEVPLLVY-EFISNGTLFQYLHDQNEEF------P-------L 179
I H NVV LLG C + PL+V EF G L YL + EF P L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
T E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 240 THVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 18/231 (7%)
Query: 65 GSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEG 121
G + R TT +D + + ILG GG V+ L R VAVK ++ + +
Sbjct: 13 GLVPRGSHMTTPS--HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP 70
Query: 122 KLE-EFINEVVILSQINHRNVVKLLGCC-LETE---VPLLVYEFISNGTLFQYLHDQNEE 176
F E + +NH +V + ET +P +V E++ TL +H E
Sbjct: 71 SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TE 127
Query: 177 FPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV 236
P+T + + + + +L++ H I HRD+K NI+++ KV DFG ++ I
Sbjct: 128 GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA 184
Query: 237 IDQTHVT--TKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
VT V GT YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 185 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 91 LGQGGQGTVYKGML--ADGRIVAV-----KKSKIVHEGKLEEFINEVVILSQINHRNVVK 143
LG G G V +G G+ V+V K + +++FI EV + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
L G L + +V E G+L L F L R A +VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR- 135
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG--TFGYLDPEYFRSG 261
HRD+ + N+LL + K+ DFG + + + H + F + PE ++
Sbjct: 136 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 262 QFTDKSDVYSFGVVLVELLT-GQKPII-LTGSK 292
F+ SD + FGV L E+ T GQ+P I L GS+
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 226
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 108/228 (47%), Gaps = 29/228 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF------P-------L 179
I H NVV LLG C + PL+V EF G L YL + EF P L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
T E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 240 THVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 108/228 (47%), Gaps = 29/228 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 76
Query: 135 QINHR-NVVKLLGCCLETEVPLLVY-EFISNGTLFQYLHDQNEEF------P-------L 179
I H NVV LLG C + PL+V EF G L YL + EF P L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
T E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 240 THVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 82 TDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEGKLE-EFINEVVILSQIN 137
+D + + ILG GG V+ L R VAVK ++ + + F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 138 HRNVVKLLGCC-LETE---VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
H +V + ET +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT--TKVQGTFG 251
+L++ H I HRD+K NI+++ KV DFG ++ I VT V GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 108/228 (47%), Gaps = 29/228 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILI 122
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF------P-------L 179
I H NVV LLG C + PL+V EF G L YL + EF P L
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
T E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 183 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 239
Query: 240 THVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 44/285 (15%)
Query: 89 RILGQGGQGTVYKGM-LADGRIVAVKKS-KIVHEGKL----EEFINEVVILSQINHRNVV 142
++LG G GTVYKG+ + DG V + + K++ E +E ++E +++ + V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP----LTWEMRLRIATEVAGSLSYL 198
+LLG CL + V LV + + G L ++ + L W M ++A +SYL
Sbjct: 83 RLLGICLTSTV-QLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCM------QIAKGMSYL 135
Query: 199 HSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQT-HVTTKVQGTFGYLDPEY 257
+ HRD+ + N+L+ K+ DFG ++ + ID+T + + ++ E
Sbjct: 136 EDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEEN--RLYDFLD 315
+FT +SDV+S+GV + EL+T G+K G+ A I + E RL
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT-------FGAKPYDGIPAREIPDLLEKGERL----- 240
Query: 316 DQVLKVGQKEEIMTIAT--LATRCLNLNGKRRPTMKEVAMELERI 358
+ I TI + +C ++ + RP +E+ E R+
Sbjct: 241 -------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 142/328 (43%), Gaps = 59/328 (17%)
Query: 66 SIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGML--ADGR----IVAVKKSK-IV 118
S+D K+ + + + + + LG+G G V K GR VAVK K
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH------- 171
+L + ++E +L Q+NH +V+KL G C + LL+ E+ G+L +L
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 172 --------------DQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNIL 217
D +E LT + A +++ + YL A M + HRD+ + NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNIL 182
Query: 218 LNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQFTDKSDVYSFGVV 275
+ E K++DFG S+ V ++ + QG ++ E +T +SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSR-DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 276 LVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMT-----I 330
L E++T G G+ RL++ +LK G + E +
Sbjct: 242 LWEIVT-------LGGNPYPGIPP--------ERLFN-----LLKTGHRMERPDNCSEEM 281
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERI 358
L +C +RP +++ +LE++
Sbjct: 282 YRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 142/328 (43%), Gaps = 59/328 (17%)
Query: 66 SIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGML--ADGR----IVAVKKSK-IV 118
S+D K+ + + + + + LG+G G V K GR VAVK K
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 119 HEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH------- 171
+L + ++E +L Q+NH +V+KL G C + LL+ E+ G+L +L
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 172 --------------DQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNIL 217
D +E LT + A +++ + YL A M + HRD+ + NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 218 LNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQFTDKSDVYSFGVV 275
+ E K++DFG S+ V ++ + QG ++ E +T +SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSR-DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 276 LVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIM-----TI 330
L E++T G G+ RL++ +LK G + E +
Sbjct: 242 LWEIVT-------LGGNPYPGIPP--------ERLFN-----LLKTGHRMERPDNCSEEM 281
Query: 331 ATLATRCLNLNGKRRPTMKEVAMELERI 358
L +C +RP +++ +LE++
Sbjct: 282 YRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF------P-------L 179
I H NVV LLG C + PL+V EF G L YL + EF P L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
T E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 240 THVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
LG G G V+ G VAVK K +G + + F+ E ++ Q+ H+ +V+L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ + ++ E++ NG+L +L + LT L +A ++A ++++ + H
Sbjct: 74 TQEPI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---H 128
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
R++++ NIL+++ + K+ADFG ++ I ++ + + PE G FT KSD
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 269 VYSFGVVLVELLT-GQKP 285
V+SFG++L E++T G+ P
Sbjct: 189 VWSFGILLTEIVTHGRIP 206
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 26/219 (11%)
Query: 85 FNVNRILGQGGQGTVYKGMLAD-GRIVAVKKSKI-VHEGKLEEFINEVVILSQINHRNVV 142
+ + LG GG G V + + D G VA+K+ + + E + E+ I+ ++NH NVV
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 143 KL------LGCCLETEVPLLVYEFISNGTLFQYLHD-QN----EEFPLTWEMRLRIATEV 191
L ++PLL E+ G L +YL+ +N +E P+ + +++
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDI 130
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+ +L YLH I HRD+K NI+L ++ K+ D G +K +DQ + T+ G
Sbjct: 131 SSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVG 185
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
T YL PE ++T D +SFG + E +TG +P +
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 26/219 (11%)
Query: 85 FNVNRILGQGGQGTVYKGMLAD-GRIVAVKKSKI-VHEGKLEEFINEVVILSQINHRNVV 142
+ + LG GG G V + + D G VA+K+ + + E + E+ I+ ++NH NVV
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 143 KL------LGCCLETEVPLLVYEFISNGTLFQYLHD-QN----EEFPLTWEMRLRIATEV 191
L ++PLL E+ G L +YL+ +N +E P+ + +++
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDI 131
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+ +L YLH I HRD+K NI+L ++ K+ D G +K +DQ + T+ G
Sbjct: 132 SSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVG 186
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
T YL PE ++T D +SFG + E +TG +P +
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 76
Query: 135 QINHR-NVVKLLGCCLETEVPLLVY-EFISNGTLFQYLHDQNEEF------P-------L 179
I H NVV LLG C + PL+V EF G L YL + EF P L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
T E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 240 THVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF------P-------L 179
I H NVV LLG C + PL+V EF G L YL + EF P L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
T E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 240 THVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 258
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 259 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 312 DLDRILTL 319
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 76
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF------P-------L 179
I H NVV LLG C + PL+V EF G L YL + EF P L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
T E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 240 THVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + + +V+ + YL + +
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRH--VKDKNIIELVHQVSMGMKYLEESNFV- 139
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE +F
Sbjct: 140 --HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 197
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 198 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 232
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 45/315 (14%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYK----GMLADGRI--VAVKKSK-IVH 119
ID +L ++ + ++ + LG G G V + G+ + + VAVK K H
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 120 EGKLEEFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH------- 171
+ E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGL 149
Query: 172 ------DQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAK 225
N E L+ L +++VA +++L AS HRD+ + N+LL + AK
Sbjct: 150 EYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAK 206
Query: 226 VADFGTSKFIVIDQTH-VTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT--- 281
+ DFG ++ I+ D + V + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 207 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 266
Query: 282 GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLN 341
P IL SK Y + D I ++ C L
Sbjct: 267 NPYPGILVNSK-----------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALE 309
Query: 342 GKRRPTMKEVAMELE 356
RPT +++ L+
Sbjct: 310 PTHRPTFQQICSFLQ 324
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + + +V+ + YL + +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRH--VKDKNIIELVHQVSMGMKYLEESNFV- 149
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE +F
Sbjct: 150 --HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + + +V+ + YL + +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRH--VKDKNIIELVHQVSMGMKYLEESNFV- 149
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE +F
Sbjct: 150 --HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 131 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 188 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 231
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 232 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 77 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 230
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 231 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 258
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 259 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 312 DLDRILTL 319
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 232
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 233 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + + +V+ + YL + +
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRH--VKDKNIIELVHQVSMGMKYLEESNFV- 147
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE +F
Sbjct: 148 --HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 205
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 206 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 240
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 134 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 191 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 234
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 235 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 232
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 233 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + +V+ + YL +
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD--KNIIELVHQVSMGMKYLEESN--- 125
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE +F
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 185
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 186 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 80 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 190 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 233
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 234 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 131 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 188 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 231
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 232 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 232
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 233 ------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 134 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 191 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 234
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 235 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + +V+ + YL + +
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD--KNIIELVHQVSMGMKYLEESNFV- 129
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE +F
Sbjct: 130 --HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + +V+ + YL + +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD--KNIIELVHQVSMGMKYLEESNFV- 133
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE +F
Sbjct: 134 --HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 191
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 226
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 38/221 (17%)
Query: 90 ILGQGGQGTVYKGMLA-DGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
+LGQG G V K A D R A+KK + E KL ++EV++L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 149 LETE---VPL----------LVYEFISNGTLFQYLHDQN--EEFPLTWEMRLRIATEVAG 193
LE P+ + E+ N TL+ +H +N ++ W R+ ++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-------FIVIDQTHVT--- 243
+LSY+HS I HRD+K NI ++E K+ DFG +K + +D ++
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 244 ---TKVQGTFGYLDPEYFR-SGQFTDKSDVYSFGVVLVELL 280
T GT Y+ E +G + +K D+YS G++ E++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 230
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 231 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 102 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 155 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 212 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 255
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 256 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 71 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 123
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 124 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 181 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 224
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 225 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 230
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 231 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 133/317 (41%), Gaps = 52/317 (16%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYK----GMLADGRI--VAVKKSK-IVH 119
ID +L ++ + ++ + LG G G V + G+ + + VAVK K H
Sbjct: 15 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 74
Query: 120 EGKLEEFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH------- 171
+ E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 75 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAML 134
Query: 172 -------------DQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILL 218
D+ + PL L +++VA +++L AS HRD+ + N+LL
Sbjct: 135 GPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 191
Query: 219 NEKYTAKVADFGTSKFIVIDQTH-VTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLV 277
+ AK+ DFG ++ I+ D + V + ++ PE +T +SDV+S+G++L
Sbjct: 192 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 251
Query: 278 ELLT---GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLA 334
E+ + P IL SK Y + D I ++
Sbjct: 252 EIFSLGLNPYPGILVNSK-----------------FYKLVKDGYQMAQPAFAPKNIYSIM 294
Query: 335 TRCLNLNGKRRPTMKEV 351
C L RPT +++
Sbjct: 295 QACWALEPTHRPTFQQI 311
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 194 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 237
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 238 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 230
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 231 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 232
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 233 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 87 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 139
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 140 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 197 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 240
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 241 ------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 26/224 (11%)
Query: 66 SIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIV----HEG 121
S+D +LFT +L+K +G+G G V+KG+ D R V KI+ E
Sbjct: 2 SLDPEELFT--KLEK----------IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAED 47
Query: 122 KLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTW 181
++E+ E+ +LSQ + V K G L+ ++ E++ G+ L E PL
Sbjct: 48 EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDE 103
Query: 182 EMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTH 241
I E+ L YLHS + HRDIK+ N+LL+E K+ADFG + + Q
Sbjct: 104 TQIATILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 242 VTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
T V GT ++ PE + + K+D++S G+ +EL G+ P
Sbjct: 161 RNTFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 232
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 233 ------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 83 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 135
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 136 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 193 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 236
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 237 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 190 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 233
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 234 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 142/301 (47%), Gaps = 45/301 (14%)
Query: 70 CKLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGK-----L 123
++F EL K ++LG G GTV+KG+ + +G + + V E K
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 124 EEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEM 183
+ + ++ + ++H ++V+LLG C + + LV +++ G+L H + L ++
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLD--HVRQHRGALGPQL 134
Query: 184 RLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT 243
L ++A + YL + HR++ + N+LL +VADFG + + D +
Sbjct: 135 LLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
Query: 244 -TKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFI 302
++ + ++ E G++T +SDV+S+GV + EL+T G++ GL
Sbjct: 192 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT-------FGAEPYAGL----- 239
Query: 303 LSMEENRLYDFLDDQVLKVGQK---EEIMTIAT--LATRCLNLNGKRRPTMKEVAMELER 357
RL + D +L+ G++ +I TI + +C ++ RPT KE+A E R
Sbjct: 240 ------RLAEVPD--LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTR 291
Query: 358 I 358
+
Sbjct: 292 M 292
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 190 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 233
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 234 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 194 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 237
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 238 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 148/321 (46%), Gaps = 55/321 (17%)
Query: 56 LQQQLTSSDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGR----IV 110
L + LT S + ++ L KE + F ++LG G GTVYKG+ + +G V
Sbjct: 27 LVEPLTPSGEAPNQALLRILKETE-----FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 81
Query: 111 AVKKSKIVHEGKL-EEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQY 169
A+ + + K +E ++E +++ +++ +V +LLG CL + V L+ + + G L Y
Sbjct: 82 AIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDY 140
Query: 170 LHDQNE----EFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAK 225
+ + + ++ L W ++A ++YL + HRD+ + N+L+ K
Sbjct: 141 VREHKDNIGSQYLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVK 191
Query: 226 VADFGTSKFIVIDQTHVTT---KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTG 282
+ DFG +K + ++ KV + L+ R +T +SDV+S+GV + EL+T
Sbjct: 192 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT- 248
Query: 283 QKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRC 337
GSK G+ A I S +L+ G++ I T + +C
Sbjct: 249 ------FGSKPYDGIPASEISS-------------ILEKGERLPQPPICTIDVYMIMVKC 289
Query: 338 LNLNGKRRPTMKEVAMELERI 358
++ RP +E+ +E ++
Sbjct: 290 WMIDADSRPKFRELIIEFSKM 310
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 74 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEG 126
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 127 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 184 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 227
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 228 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 273
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 91 LGQGGQGTVYKGML---ADG---RIVAVKKSKIVHEGKL-EEFINEVVILSQINHRNVVK 143
LG+ G VYKG L A G + VA+K K EG L EEF +E ++ +++ H NVV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYL-------------HDQNEEFPLTWEMRLRIATE 190
LLG + + +++ + S+G L ++L D+ + L + + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VIDQTHVTTKVQGT 249
+A + YL +S + H+D+ + N+L+ +K K++D G + + D +
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE G+F+ SD++S+GVVL E+ + G + G + ++ M NR
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-------YGLQPYCGYSNQDVVEMIRNR 246
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMEL 355
QVL A L C N RRP K++ L
Sbjct: 247 -------QVLPCPDDCPAWVYA-LMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 230
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 231 ------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVH----EGKLEEFINEVVILSQINHRNVVKLLG 146
+G+G G V+KG+ D R V KI+ E ++E+ E+ +LSQ + V K G
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
L+ ++ E++ G+ L E PL I E+ L YLHS +
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKKI-- 146
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRDIK+ N+LL+E K+ADFG + + Q T V GT ++ PE + + K
Sbjct: 147 -HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSK 204
Query: 267 SDVYSFGVVLVELLTGQKP 285
+D++S G+ +EL G+ P
Sbjct: 205 ADIWSLGITAIELARGEPP 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++LG G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 190 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 233
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 234 ------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 279
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 91 LGQGGQGTVYKGML---ADG---RIVAVKKSKIVHEGKL-EEFINEVVILSQINHRNVVK 143
LG+ G VYKG L A G + VA+K K EG L EEF +E ++ +++ H NVV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYL-------------HDQNEEFPLTWEMRLRIATE 190
LLG + + +++ + S+G L ++L D+ + L + + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VIDQTHVTTKVQGT 249
+A + YL +S + H+D+ + N+L+ +K K++D G + + D +
Sbjct: 154 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE G+F+ SD++S+GVVL E+ + G + G + ++ M NR
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-------YGLQPYCGYSNQDVVEMIRNR 263
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMEL 355
QVL A L C N RRP K++ L
Sbjct: 264 -------QVLPCPDDCPAWVYA-LMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 14/231 (6%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G V+ G + VAVK K ++ F+ E ++ + H +V+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
E ++ E+++ G+L +L +E + + + ++A ++Y+ + HRD
Sbjct: 80 EEPIYIITEYMAKGSLLDFLK-SDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI---HRD 135
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQFTDKSD 268
+++ N+L++E K+ADFG ++ VI+ T + F + PE G FT KSD
Sbjct: 136 LRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 269 VYSFGVVLVELLT-GQKPII-LTGSKEATGLAAYFILSMEEN---RLYDFL 314
V+SFG++L E++T G+ P T + T L+ + + EN LYD +
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIM 244
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 142/301 (47%), Gaps = 45/301 (14%)
Query: 70 CKLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGK-----L 123
++F EL K ++LG G GTV+KG+ + +G + + V E K
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 124 EEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEM 183
+ + ++ + ++H ++V+LLG C + + LV +++ G+L H + L ++
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLD--HVRQHRGALGPQL 116
Query: 184 RLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT 243
L ++A + YL + HR++ + N+LL +VADFG + + D +
Sbjct: 117 LLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173
Query: 244 -TKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFI 302
++ + ++ E G++T +SDV+S+GV + EL+T G++ GL
Sbjct: 174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT-------FGAEPYAGL----- 221
Query: 303 LSMEENRLYDFLDDQVLKVGQK---EEIMTIAT--LATRCLNLNGKRRPTMKEVAMELER 357
RL + D +L+ G++ +I TI + +C ++ RPT KE+A E R
Sbjct: 222 ------RLAEVPD--LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTR 273
Query: 358 I 358
+
Sbjct: 274 M 274
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 16/232 (6%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLE 150
LG G G V+ G + VAVK K ++ F+ E ++ + H +V+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 151 TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRD 210
E ++ EF++ G+L +L +E + + + ++A ++Y+ + HRD
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKS-DEGGKVLLPKLIDFSAQIAEGMAYIERKNYI---HRD 134
Query: 211 IKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQFTDKSD 268
+++ N+L++E K+ADFG ++ VI+ T + F + PE G FT KS+
Sbjct: 135 LRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 269 VYSFGVVLVELLTGQKPIILTGSKEATGLAA----YFILSME--ENRLYDFL 314
V+SFG++L E++T K I G A ++A Y + ME + LYD +
Sbjct: 193 VWSFGILLYEIVTYGK-IPYPGRTNADVMSALSQGYRMPRMENCPDELYDIM 243
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 258
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 259 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 312 DLDRILTL 319
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 258
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 259 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 312 DLDRILTL 319
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 258
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 259 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 312 DLDRILTL 319
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + + +V+ + YL +
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRH--VKDKNIIELVHQVSMGMKYLEESN--- 489
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE +F
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 550 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 584
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + + +V+ + YL +
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRH--VKDKNIIELVHQVSMGMKYLEESN--- 490
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE +F
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 551 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 585
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 258
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 259 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 312 DLDRILTL 319
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I + +NH
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 127/263 (48%), Gaps = 19/263 (7%)
Query: 22 GGYRCITPKRKVYIIKREDIKLKEKFFKRNGGLVLQQQLTSSDGSIDRCKLFTTKELDKA 81
GG+ I+P+ ++ +L + + K N GL Q+L+ S K + +
Sbjct: 134 GGF-YISPRSTFSTLQ----ELVDHYKKGNDGLC--QKLSVPCMSSKPQKPWEKDAWEIP 186
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNV 141
+ + + LG G G V+ VAVK K +E F+ E ++ + H +
Sbjct: 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKL 245
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLH-DQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
VKL + + ++ EF++ G+L +L D+ + PL + + ++A ++++
Sbjct: 246 VKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ 302
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYF 258
+ HRD+++ NIL++ K+ADFG ++ VI+ T + F + PE
Sbjct: 303 RNYI---HRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAI 357
Query: 259 RSGQFTDKSDVYSFGVVLVELLT 281
G FT KSDV+SFG++L+E++T
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 15/215 (6%)
Query: 91 LGQGGQGTVYKGML-----ADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG G GTV KG V + K++ +E + E ++ Q+++ +V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G C E E +LV E G L +YL QN + + + +V+ + YL + +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD--KNIIELVHQVSMGMKYLEESNFV- 133
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFRSGQF 263
HRD+ + N+LL ++ AK++DFG SK + D+ + G + + PE +F
Sbjct: 134 --HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 264 TDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGL 297
+ KSDV+SFGV++ E + GQKP E T +
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 226
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL C + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 154
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 155 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 144 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 247
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 248 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 301 DLDRILTL 308
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 13/207 (6%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVV 142
+ + + LG G G V+ VAVK K +E F+ E ++ + H +V
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLH-DQNEEFPLTWEMRLRIATEVAGSLSYLHSA 201
KL + + ++ EF++ G+L +L D+ + PL + + ++A ++++
Sbjct: 74 KLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR 130
Query: 202 ASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG--YLDPEYFR 259
+ HRD+++ NIL++ K+ADFG ++ VI+ T + F + PE
Sbjct: 131 NYI---HRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAIN 185
Query: 260 SGQFTDKSDVYSFGVVLVELLT-GQKP 285
G FT KSDV+SFG++L+E++T G+ P
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E ++ADFG ++ I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 258
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 259 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 312 DLDRILTL 319
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 147 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 250
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 251 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 304 DLDRILTL 311
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 7 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 121 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 134 SQI-NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 304
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 305 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 358 DLDRILTL 365
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 43/313 (13%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYK----GMLADGRI--VAVKKSK-IVH 119
ID +L ++ + ++ + LG G G V + G+ + + VAVK K H
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 120 EGKLEEFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQN---E 175
+ E ++E+ I+S + H N+V LLG C L++ E+ G L +L ++ E
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 176 EFP--------LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVA 227
P L+ L +++VA +++L AS HRD+ + N+LL + AK+
Sbjct: 150 TDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 206
Query: 228 DFGTSKFIVIDQTH-VTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT---GQ 283
DFG ++ I+ D + V + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
Query: 284 KPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGK 343
P IL SK Y + D I ++ C L
Sbjct: 267 YPGILVNSK-----------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPT 309
Query: 344 RRPTMKEVAMELE 356
RPT +++ L+
Sbjct: 310 HRPTFQQICSFLQ 322
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ E+ S G L +YL +D N E +
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 142 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 245
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 246 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 299 DLDRILTL 306
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 122/278 (43%), Gaps = 56/278 (20%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVH----EGKLEEFINEVVILSQINHRNVVKLLG 146
+G+G G V+KG+ D R V KI+ E ++E+ E+ +LSQ + V K G
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQN-EEFPLTWEMRLRIAT---EVAGSLSYLHSAA 202
L+ ++ E++ G+ L +EF +IAT E+ L YLHS
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEF--------QIATMLKEILKGLDYLHSEK 140
Query: 203 SMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQ 262
+ HRDIK+ N+LL+E+ K+ADFG + + Q T V GT ++ PE +
Sbjct: 141 KI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSA 196
Query: 263 FTDKSDVYSFGVVLVELLTGQKP---------IILTGSKEATGLAAYFILSMEENRLYDF 313
+ K+D++S G+ +EL G+ P + L L F S +E F
Sbjct: 197 YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKE-----F 251
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+D CLN + RPT KE+
Sbjct: 252 ID--------------------ACLNKDPSFRPTAKEL 269
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKKSKIVHEGKLE-EFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK V+ + E +F+ E +I+S+ NH+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L + HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 171 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 223
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 268
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 269 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 325
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 326 TALPIEYGPLV 336
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S++NH+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 157 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 209
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 254
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 255 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 311
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 312 TALPIEYGPLV 322
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 136/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S++NH+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L + HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 171 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 223
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 268
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 269 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 325
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 326 TALPIEYGPLV 336
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 156 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 208
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 253
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 254 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 310
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 311 TALPIEYGPLV 321
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIV----HEGKLEEFINEVVILSQINHRNVVKLLG 146
+G+G G V+KG+ D R V KI+ E ++E+ E+ +LSQ + V K G
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
L+ ++ E++ G+ L E PL I E+ L YLHS +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKKI-- 141
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRDIK+ N+LL+E K+ADFG + + Q V GT ++ PE + + K
Sbjct: 142 -HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSK 199
Query: 267 SDVYSFGVVLVELLTGQKP 285
+D++S G+ +EL G+ P
Sbjct: 200 ADIWSLGITAIELARGEPP 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 43/313 (13%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYK----GMLADGRI--VAVKKSK-IVH 119
ID +L ++ + ++ + LG G G V + G+ + + VAVK K H
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 120 EGKLEEFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH------D 172
+ E ++E+ I+S + H N+V LLG C L++ E+ G L +L +
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLE 149
Query: 173 QNEEFPL---TWEMR--LRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVA 227
+ F + T R L +++VA +++L AS HRD+ + N+LL + AK+
Sbjct: 150 TDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 206
Query: 228 DFGTSKFIVIDQTH-VTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT---GQ 283
DFG ++ I+ D + V + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
Query: 284 KPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGK 343
P IL SK Y + D I ++ C L
Sbjct: 267 YPGILVNSK-----------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPT 309
Query: 344 RRPTMKEVAMELE 356
RPT +++ L+
Sbjct: 310 HRPTFQQICSFLQ 322
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L + HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 156 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 208
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 253
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 254 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 310
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 311 TALPIEYGPLV 321
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 107 GRIVAVKKSKIVHEGK-LEEFINEVVILSQINHRNVVKLLGCCLET--EVPLLVYEFISN 163
G VAVK K G + + E+ IL + H N+VK G C E L+ EF+ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 164 GTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
G+L +YL + L + +L+ A ++ + YL S + HRD+ + N+L+ ++
Sbjct: 110 GSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQ 164
Query: 224 AKVADFGTSKFIVIDQTHVTTK---VQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELL 280
K+ DFG +K I D+ T K F Y PE +F SDV+SFGV L ELL
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELL 223
Query: 281 T 281
T
Sbjct: 224 T 224
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQINH 138
D F++ R LG+G G VY + I+A+K KS++ EG + E+ I S + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAGSLS 196
N++++ + + L+ EF G L++ L H + +E + E+A +L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QRSATFMEELADALH 128
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
Y H + HRDIK N+L+ K K+ADFG S V + + GT YL PE
Sbjct: 129 YCHERK---VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPE 182
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+K D++ GV+ E L G P
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L + HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 163 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 215
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 260
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 261 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 317
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 318 TALPIEYGPLV 328
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 38/302 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGR-IVAVKKSKIVH-EGKLEEFINEVVILSQINHRN 140
D + + ++G G V A + VA+K+ + + ++E + E+ +SQ +H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHD-----QNEEFPLTWEMRLRIATEVAGSL 195
+V + + LV + +S G++ + +++ L I EV L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTF----G 251
YLH + HRD+K+ NILL E + ++ADFG S F+ KV+ TF
Sbjct: 135 EYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 252 YLDPEYFRSGQFTD-KSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRL 310
++ PE + D K+D++SFG+ +EL TG P +L+++
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY------HKYPPMKVLMLTLQN--- 242
Query: 311 YDFLDDQVLKVGQKEEIM------TIATLATRCLNLNGKRRPTMKEVAMELERIQALQKD 364
D L+ G +++ M + + + CL + ++RPT A EL R + QK
Sbjct: 243 ----DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQKA 294
Query: 365 IN 366
N
Sbjct: 295 KN 296
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 173 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 225
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 270
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 271 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 327
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 328 TALPIEYGPLV 338
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 26/224 (11%)
Query: 66 SIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIV----HEG 121
S+D +LFT +L+K +G+G G V+KG+ D R V KI+ E
Sbjct: 2 SLDPEELFT--KLEK----------IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAED 47
Query: 122 KLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTW 181
++E+ E+ +LSQ + V K G L+ ++ E++ G+ L E PL
Sbjct: 48 EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDE 103
Query: 182 EMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTH 241
I E+ L YLHS + HRDIK+ N+LL+E K+ADFG + + Q
Sbjct: 104 TQIATILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 242 VTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
V GT ++ PE + + K+D++S G+ +EL G+ P
Sbjct: 161 RNXFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L + HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 157 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 209
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 254
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 255 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 311
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 312 TALPIEYGPLV 322
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQINH 138
D F++ R LG+G G VY + I+A+K KS++ EG + E+ I S + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIAT---EVAG 193
N++++ + + L+ EF G L++ L H + +E R AT E+A
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE--------QRSATFMEELAD 126
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+L Y H + HRDIK N+L+ K K+ADFG S V + + GT YL
Sbjct: 127 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYL 180
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
PE +K D++ GV+ E L G P
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L + HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 171 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 223
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 268
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 269 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 325
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 326 TALPIEYGPLV 336
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRI----VAVKKSKIVHEGKLEEFIN-EVVILSQINHR 139
+++ + LG+G G V LA R+ VAVK + E I E+ I +NH
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
NVVK G E + L E+ S G LF + + + R ++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK N+LL+E+ K++DFG + F ++ + K+ GT Y+ PE
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 259 RSGQF-TDKSDVYSFGVVLVELLTGQKP 285
+ +F + DV+S G+VL +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++L G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L++ + + G L Y+ + + ++ L W ++A
Sbjct: 84 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 194 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 237
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 238 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L + HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 148 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 200
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 245
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 246 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 302
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 303 TALPIEYGPLV 313
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 107 GRIVAVKKSKIVHEGK-LEEFINEVVILSQINHRNVVKLLGCCLET--EVPLLVYEFISN 163
G VAVK K G + + E+ IL + H N+VK G C E L+ EF+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 164 GTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
G+L +YL + L + +L+ A ++ + YL S + HRD+ + N+L+ ++
Sbjct: 98 GSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQ 152
Query: 224 AKVADFGTSKFIVIDQTHVTTK--VQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
K+ DFG +K I D+ T K + PE +F SDV+SFGV L ELLT
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++L G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 230
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 231 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 183 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLP 235
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 280
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 281 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 337
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 338 TALPIEYGPLV 348
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 50/292 (17%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGR----IVAVKKSKIVHEGKL-EEFINEVVILSQINH 138
F ++L G GTVYKG+ + +G VA+K+ + K +E ++E +++ +++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGS 194
+V +LLG CL + V L+ + + G L Y+ + + ++ L W ++A
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT---KVQGTFG 251
++YL + HRD+ + N+L+ K+ DFG +K + ++ KV +
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
L+ R +T +SDV+S+GV + EL+T GSK G+ A I S
Sbjct: 194 ALESILHRI--YTHQSDVWSYGVTVWELMT-------FGSKPYDGIPASEISS------- 237
Query: 312 DFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAMELERI 358
+L+ G++ I T + +C ++ RP +E+ +E ++
Sbjct: 238 ------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQI 136
H R+L G+G K LA GR VA+K K+++ + L++ EV I+ +
Sbjct: 10 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL 68
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAG 193
NH N+VKL +ETE L L+ E+ S G +F YL H + +E + R ++
Sbjct: 69 NHPNIVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVS 122
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ---GTF 250
++ Y H I HRD+K+ N+LL+ K+ADFG S ++ V K+ G+
Sbjct: 123 AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDTFCGSP 174
Query: 251 GYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPII---LTGSKEATGLAAY---FIL 303
Y PE F+ ++ DV+S GV+L L++G P L +E Y F +
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 234
Query: 304 SME-ENRLYDFLDDQVLKVGQKEEIM 328
S + EN L FL +K G E+IM
Sbjct: 235 STDCENLLKRFLVLNPIKRGTLEQIM 260
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 44/311 (14%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-----T 249
L + HRDI + N LL AK+ DFG ++ D + +G
Sbjct: 157 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAQ----DIYRASYYRKGGCAMLP 209
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
++ PE F G FT K+D +SFGV+L E+ + G Y S +E
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE-- 254
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
+ +F+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 255 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVIN 311
Query: 370 ICDEIESCDIV 380
IE +V
Sbjct: 312 TALPIEYGPLV 322
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 41/315 (13%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQG-----TVYKGMLADGRI-VAVKKSKI-VH 119
ID +L + + + + + LG G G T Y + +D + VAVK K H
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 120 EGKLEEFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF- 177
+ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L + + F
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 149
Query: 178 --------------PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
L E L + +VA +++L AS HRD+ + NILL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 206
Query: 224 AKVADFGTSKFIVIDQTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTG 282
K+ DFG ++ I D +V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 207 TKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS- 265
Query: 283 QKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNG 342
GS G+ +++ Y + + + + + + C + +
Sbjct: 266 ------LGSSPYPGMPV-------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADP 312
Query: 343 KRRPTMKEVAMELER 357
+RPT K++ +E+
Sbjct: 313 LKRPTFKQIVQLIEK 327
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ + S G L +YL +D N E +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 258
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 259 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 312 DLDRILTL 319
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 132/307 (42%), Gaps = 36/307 (11%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-TFGYL 253
L HRDI + N LL AK+ DFG ++ I + ++
Sbjct: 174 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE F G FT K+D +SFGV+L E+ + G Y S +E + +F
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE--VLEF 275
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDE 373
+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 276 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVINTALP 332
Query: 374 IESCDIV 380
IE +V
Sbjct: 333 IEYGPLV 339
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 132/307 (42%), Gaps = 36/307 (11%)
Query: 89 RILGQGGQGTVYKGMLA------DGRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNV 141
R LG G G VY+G ++ VAVK ++ E +F+ E +I+S+ NH+N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF--PLTWEM--RLRIATEVAGSLSY 197
V+ +G L++ ++ E ++ G L +L + P + M L +A ++A Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 198 LHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQG-TFGYL 253
L HRDI + N LL AK+ DFG ++ I + ++
Sbjct: 197 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDF 313
PE F G FT K+D +SFGV+L E+ + G Y S +E + +F
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------LGYMPYPSKSNQE--VLEF 298
Query: 314 LDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQICDE 373
+ K + + T+C + RP A+ LERI+ +D +V
Sbjct: 299 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF---AIILERIEYCTQDPDVINTALP 355
Query: 374 IESCDIV 380
IE +V
Sbjct: 356 IEYGPLV 362
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 36/266 (13%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQI 136
H R+L G+G K LA GR VA+K K+++ + L++ EV I+ +
Sbjct: 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL 71
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAG 193
NH N+VKL +ETE L L+ E+ S G +F YL H + +E + R ++
Sbjct: 72 NHPNIVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVS 125
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ---GTF 250
++ Y H I HRD+K+ N+LL+ K+ADFG S ++ V K+ G
Sbjct: 126 AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDAFCGAP 177
Query: 251 GYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPII---LTGSKEATGLAAY---FIL 303
Y PE F+ ++ DV+S GV+L L++G P L +E Y F +
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 237
Query: 304 SME-ENRLYDFLDDQVLKVGQKEEIM 328
S + EN L FL +K G E+IM
Sbjct: 238 STDCENLLKRFLVLNPIKRGTLEQIM 263
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGR-IVAVKKSKIVH-EGKLEEFINEVVILSQINHRN 140
D + + ++G G V A + VA+K+ + + ++E + E+ +SQ +H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHD-----QNEEFPLTWEMRLRIATEVAGSL 195
+V + + LV + +S G++ + +++ L I EV L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTF----G 251
YLH + HRD+K+ NILL E + ++ADFG S F+ KV+ TF
Sbjct: 130 EYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 252 YLDPEYFRSGQFTD-KSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRL 310
++ PE + D K+D++SFG+ +EL TG P +L+++
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY------HKYPPMKVLMLTLQN--- 237
Query: 311 YDFLDDQVLKVGQKEEIM------TIATLATRCLNLNGKRRPTMKEVAMELERIQALQK 363
D L+ G +++ M + + + CL + ++RPT A EL R + QK
Sbjct: 238 ----DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQK 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Query: 85 FNVNRILGQGGQGTVYKG-MLADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F V +LG+G VY+ + G VA+K K + G ++ NEV I Q+ H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
+++L ++ LV E NG + +YL +N P + ++ + YLHS
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFG-TSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
I HRD+ +N+LL K+ADFG ++ + + H T + GT Y+ PE
Sbjct: 131 HG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIAT 185
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPI 286
+SDV+S G + LL G+ P
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 84 HFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLE-EFINEVVILSQINHR 139
+F + + +G+G VY+ L DG VA+KK +I + + K + I E+ +L Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYL 198
NV+K +E +V E G L + + H + ++ + + ++ +L ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 199 HSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
HS M HRDIK N+ + K+ D G +F T + V GT Y+ PE
Sbjct: 153 HSRRVM---HRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERI 208
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ KSD++S G +L E+ Q P
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGR-IVAVK---KSKIVHEGKLEEFINEVVILSQINH 138
D F++ R LG+G G VY + I+A+K KS++ EG + E+ I S + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAGSLS 196
N++++ + + L+ EF G L++ L H + +E + E+A +L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QRSATFMEELADALH 128
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
Y H + HRDIK N+L+ K K+ADFG S V + + GT YL PE
Sbjct: 129 YCHERK---VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPE 182
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+K D++ GV+ E L G P
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 52/308 (16%)
Query: 83 DHFNVNRILGQGGQGTVY--------KGMLADGRIVAVKKSKI-VHEGKLEEFINEVVIL 133
D + + LG+G G V K + VAVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 134 SQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-----------HDQN--EEFPL 179
I H+N++ LLG C + ++ + S G L +YL +D N E +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-VID 238
T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 239 QTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
TT + ++ PE +T +SDV+SFGV++ E+ T G +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT-------------LGGS 258
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIAT-----LATRCLNLNGKRRPTMKEVAM 353
Y + +EE L+ ++LK G + + T + C + +RPT K++
Sbjct: 259 PYPGIPVEE--LF-----KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 354 ELERIQAL 361
+L+RI L
Sbjct: 312 DLDRILTL 319
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 47/299 (15%)
Query: 89 RILGQGGQGTVYK----GMLA--DGRIVAVKKSKIVHEGKLE-EFINEVVILSQINHRNV 141
R +G+G G V++ G+L +VAVK K ++ +F E ++++ ++ N+
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE---------------------EFPLT 180
VKLLG C + L++E+++ G L ++L + PL+
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIV-IDQ 239
+L IA +VA ++YL HRD+ + N L+ E K+ADFG S+ I D
Sbjct: 173 CAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAA 299
++ PE ++T +SDV+++GVVL E+ + GL
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS-------------YGLQP 276
Query: 300 YFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERI 358
Y+ ++ EE +Y D +L + + + L C + RP+ + L+R+
Sbjct: 277 YYGMAHEE-VIYYVRDGNILACPENCPL-ELYNLMRLCWSKLPADRPSFCSIHRILQRM 333
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 41/315 (13%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQG-----TVYKGMLADGRI-VAVKKSKI-VH 119
ID +L + + + + + LG G G T Y + +D + VAVK K H
Sbjct: 23 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 82
Query: 120 EGKLEEFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP 178
+ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L + + F
Sbjct: 83 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 142
Query: 179 LT---------------WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
+ E L + +VA +++L AS HRD+ + NILL
Sbjct: 143 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 199
Query: 224 AKVADFGTSKFIVIDQTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTG 282
K+ DFG ++ I D +V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 200 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS- 258
Query: 283 QKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNG 342
GS G+ +++ Y + + + + + + C + +
Sbjct: 259 ------LGSSPYPGMPV-------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADP 305
Query: 343 KRRPTMKEVAMELER 357
+RPT K++ +E+
Sbjct: 306 LKRPTFKQIVQLIEK 320
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 41/315 (13%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQG-----TVYKGMLADGRI-VAVKKSKI-VH 119
ID +L + + + + + LG G G T Y + +D + VAVK K H
Sbjct: 7 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 66
Query: 120 EGKLEEFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP 178
+ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L + + F
Sbjct: 67 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 126
Query: 179 LT---------------WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
+ E L + +VA +++L AS HRD+ + NILL
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 183
Query: 224 AKVADFGTSKFIVIDQTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTG 282
K+ DFG ++ I D +V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS- 242
Query: 283 QKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNG 342
GS G+ +++ Y + + + + + + C + +
Sbjct: 243 ------LGSSPYPGMPV-------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADP 289
Query: 343 KRRPTMKEVAMELER 357
+RPT K++ +E+
Sbjct: 290 LKRPTFKQIVQLIEK 304
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 80 KATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
K + F +ILG+G TV LA R A+K K I+ E K+ E ++S+
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGS 194
++H VKL + E + NG L +Y+ E R T E+ +
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSA 122
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYL 253
L YLH I HRD+K NILLNE ++ DFGT+K + + GT Y+
Sbjct: 123 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
PE SD+++ G ++ +L+ G P
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 91 LGQGGQGTV-YKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+G+G G V + + G++VAVKK + + + E NEVVI+ H NVV++ L
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 150 ETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ +V EF+ G L + H + E E + V +LS LH+ + H
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RDIKS +ILL K++DFG V + + GT ++ PE + + D
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 269 VYSFGVVLVELLTGQKP 285
++S G++++E++ G+ P
Sbjct: 208 IWSLGIMVIEMVDGEPP 224
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 41/315 (13%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQG-----TVYKGMLADGRI-VAVKKSKI-VH 119
ID +L + + + + + LG G G T Y + +D + VAVK K H
Sbjct: 25 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 84
Query: 120 EGKLEEFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP 178
+ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L + + F
Sbjct: 85 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 144
Query: 179 LT---------------WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
+ E L + +VA +++L AS HRD+ + NILL
Sbjct: 145 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 201
Query: 224 AKVADFGTSKFIVIDQTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTG 282
K+ DFG ++ I D +V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 202 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS- 260
Query: 283 QKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNG 342
GS G+ +++ Y + + + + + + C + +
Sbjct: 261 ------LGSSPYPGMPV-------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADP 307
Query: 343 KRRPTMKEVAMELER 357
+RPT K++ +E+
Sbjct: 308 LKRPTFKQIVQLIEK 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 41/315 (13%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQG-----TVYKGMLADGRI-VAVKKSKI-VH 119
ID +L + + + + + LG G G T Y + +D + VAVK K H
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 120 EGKLEEFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF- 177
+ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L + + F
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 149
Query: 178 --------------PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
L E L + +VA +++L AS HRD+ + NILL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 206
Query: 224 AKVADFGTSKFIVIDQTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTG 282
K+ DFG ++ I D +V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 207 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS- 265
Query: 283 QKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNG 342
GS G+ +++ Y + + + + + + C + +
Sbjct: 266 ------LGSSPYPGMPV-------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADP 312
Query: 343 KRRPTMKEVAMELER 357
+RPT K++ +E+
Sbjct: 313 LKRPTFKQIVQLIEK 327
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 80 KATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
K + F +ILG+G TV LA R A+K K I+ E K+ E ++S+
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGS 194
++H VKL + E + NG L +Y+ E R T E+ +
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSA 119
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYL 253
L YLH I HRD+K NILLNE ++ DFGT+K + + GT Y+
Sbjct: 120 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
PE SD+++ G ++ +L+ G P
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 80 KATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
K + F +ILG+G TV LA R A+K K I+ E K+ E ++S+
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGS 194
++H VKL + E + NG L +Y+ E R T E+ +
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSA 121
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYL 253
L YLH I HRD+K NILLNE ++ DFGT+K + + GT Y+
Sbjct: 122 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
PE SD+++ G ++ +L+ G P
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 80 KATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
K + F +ILG+G TV LA R A+K K I+ E K+ E ++S+
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGS 194
++H VKL + E + NG L +Y+ E R T E+ +
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSA 120
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYL 253
L YLH I HRD+K NILLNE ++ DFGT+K + + GT Y+
Sbjct: 121 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
PE SD+++ G ++ +L+ G P
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 91 LGQGGQGTV-YKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+G+G G V + + G++VAVKK + + + E NEVVI+ H NVV++ L
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 150 ETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ +V EF+ G L + H + E E + V +LS LH+ + H
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RDIKS +ILL K++DFG V + + GT ++ PE + + D
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 269 VYSFGVVLVELLTGQKP 285
++S G++++E++ G+ P
Sbjct: 210 IWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 91 LGQGGQGTV-YKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+G+G G V + + G++VAVKK + + + E NEVVI+ H NVV++ L
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 150 ETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ +V EF+ G L + H + E E + V +LS LH+ + H
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RDIKS +ILL K++DFG V + + GT ++ PE + + D
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 269 VYSFGVVLVELLTGQKP 285
++S G++++E++ G+ P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 26/263 (9%)
Query: 91 LGQGGQGTVYKGMLADGR-IVAVKKSKIVHEGKLEEFIN-EVVILSQINHRNVVKLLGCC 148
+G+G G VYKG+ + +VA+K + E I E+ +LSQ + + + G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
L++ ++ E++ G+ L + PL I E+ L YLHS + H
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSERKI---H 139
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RDIK+ N+LL+E+ K+ADFG + + Q V GT ++ PE + + K+D
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKAD 198
Query: 269 VYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIM 328
++S G+ +EL G+ P + + + F++ + GQ +
Sbjct: 199 IWSLGITAIELAKGEPP-----NSDLHPMRVLFLIPKNSPPTLE---------GQHSK-- 242
Query: 329 TIATLATRCLNLNGKRRPTMKEV 351
CLN + + RPT KE+
Sbjct: 243 PFKEFVEACLNKDPRFRPTAKEL 265
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 91 LGQGGQGTV-YKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+G+G G V + + G++VAVKK + + + E NEVVI+ H NVV++ L
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 150 ETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ +V EF+ G L + H + E E + V +LS LH+ + H
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RDIKS +ILL K++DFG V + + GT ++ PE + + D
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 269 VYSFGVVLVELLTGQKP 285
++S G++++E++ G+ P
Sbjct: 203 IWSLGIMVIEMVDGEPP 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 112/232 (48%), Gaps = 17/232 (7%)
Query: 84 HFNVNRILGQGGQGTVY---KGMLAD-GRIVAVKKSKIVHEGKLEEFIN---EVVILSQI 136
HF + ++LGQG G V+ K D G + A+K K K+ + + E IL+ +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKA-TLKVRDRVRTKMERDILADV 87
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
NH VVKL +TE L L+ +F+ G LF L ++E T E E+A L
Sbjct: 88 NHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALGL 143
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDP 255
+LHS + I +RD+K NILL+E+ K+ DFG SK ID GT Y+ P
Sbjct: 144 DHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAP 199
Query: 256 EYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEE 307
E + +D +S+GV++ E+LTG P KE L L M +
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ 251
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 29/231 (12%)
Query: 68 DRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKK---SKIVHEGKL 123
D +LF + +K F+ R +G G G VY + + +VA+KK S K
Sbjct: 3 DVAELFFKDDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 59
Query: 124 EEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF-ISNGTLFQYLHDQNEEFPLTWE 182
++ I EV L ++ H N ++ GC L LV E+ + + + +H + PL
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK----PLQ-- 113
Query: 183 MRLRIATEVAGSL---SYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
+ IA G+L +YLHS + HRD+K+ NILL+E K+ DFG++ +
Sbjct: 114 -EVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169
Query: 240 THVTTKVQGTFGYLDPEYFRS---GQFTDKSDVYSFGVVLVELLTGQKPII 287
V GT ++ PE + GQ+ K DV+S G+ +EL + P+
Sbjct: 170 XFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 29/231 (12%)
Query: 68 DRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKK---SKIVHEGKL 123
D +LF + +K F+ R +G G G VY + + +VA+KK S K
Sbjct: 42 DVAELFFKDDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 98
Query: 124 EEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF-ISNGTLFQYLHDQNEEFPLTWE 182
++ I EV L ++ H N ++ GC L LV E+ + + + +H + PL
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK----PLQ-- 152
Query: 183 MRLRIATEVAGSL---SYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
+ IA G+L +YLHS + HRD+K+ NILL+E K+ DFG++ +
Sbjct: 153 -EVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208
Query: 240 THVTTKVQGTFGYLDPEYFRS---GQFTDKSDVYSFGVVLVELLTGQKPII 287
V GT ++ PE + GQ+ K DV+S G+ +EL + P+
Sbjct: 209 XFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 91 LGQGGQGTV-YKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+G+G G V + + G++VAVKK + + + E NEVVI+ H NVV++ L
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 150 ETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ +V EF+ G L + H + E E + V +LS LH+ + H
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RDIKS +ILL K++DFG + + V GT ++ PE + + D
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVD 329
Query: 269 VYSFGVVLVELLTGQKP 285
++S G++++E++ G+ P
Sbjct: 330 IWSLGIMVIEMVDGEPP 346
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 149
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ SD+++ G ++ +L+ G P
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 38/221 (17%)
Query: 90 ILGQGGQGTVYKGMLA-DGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
+LGQG G V K A D R A+KK + E KL ++EV +L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 149 LE--------TEVP-----LLVYEFISNGTLFQYLHDQN--EEFPLTWEMRLRIATEVAG 193
LE T V + E+ N TL+ +H +N ++ W R+ ++
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILE 127
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-------FIVIDQTHVT--- 243
+LSY+HS I HR++K NI ++E K+ DFG +K + +D ++
Sbjct: 128 ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 244 ---TKVQGTFGYLDPEYFR-SGQFTDKSDVYSFGVVLVELL 280
T GT Y+ E +G + +K D YS G++ E +
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 91 LGQGGQGTV-YKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
+G+G G V + + G++VAVKK + + + E NEVVI+ H NVV++ L
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 150 ETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ +V EF+ G L + H + E E + V +LS LH+ + H
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSD 268
RDIKS +ILL K++DFG + + V GT ++ PE + + D
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVD 252
Query: 269 VYSFGVVLVELLTGQKP 285
++S G++++E++ G+ P
Sbjct: 253 IWSLGIMVIEMVDGEPP 269
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 124/263 (47%), Gaps = 30/263 (11%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQI 136
H R+L G+G K LA G+ VAVK K+++ + L++ EV I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVL 70
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAG 193
NH N+VKL +ETE L LV E+ S G +F YL H + +E + R ++
Sbjct: 71 NHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
++ Y H I HRD+K+ N+LL+ K+ADFG S T G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYA 179
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI---ILTGSKEATGLAAY---FILSME 306
PE F+ ++ DV+S GV+L L++G P L +E Y F +S +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 307 -ENRLYDFLDDQVLKVGQKEEIM 328
EN L FL K G E+IM
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 124/263 (47%), Gaps = 30/263 (11%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQI 136
H R+L G+G K LA G+ VAVK K+++ + L++ EV I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVL 70
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAG 193
NH N+VKL +ETE L LV E+ S G +F YL H + +E + R ++
Sbjct: 71 NHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
++ Y H I HRD+K+ N+LL+ K+ADFG S T G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYA 179
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPII---LTGSKEATGLAAY---FILSME 306
PE F+ ++ DV+S GV+L L++G P L +E Y F +S +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 307 -ENRLYDFLDDQVLKVGQKEEIM 328
EN L FL K G E+IM
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 91 LGQGGQGTVYKGMLA----DGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLG 146
+G+G G V LA GR VAVK + + + E NEVVI+ H NVV++
Sbjct: 53 IGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
L E ++ EF+ G L D + L E + V +L+YLH+ +
Sbjct: 110 SYLVGEELWVLMEFLQGGA----LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG---V 162
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRDIKS +ILL K++DFG I D V GT ++ PE + +
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATE 221
Query: 267 SDVYSFGVVLVELLTGQKP 285
D++S G++++E++ G+ P
Sbjct: 222 VDIWSLGIMVIEMVDGEPP 240
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
VKL + E + NG L +Y+ F T R A E+ +L YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETC-TRFYTA-EIVSALEYLHG 148
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYFR 259
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 85 FNVNRILGQGGQGTVY---KGMLADGR----IVAVKKSKIVHEGKLEEFINEVVILSQIN 137
F + ++LGQG G V+ K +D R + +KK+ + ++ + E IL ++N
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEVN 84
Query: 138 HRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
H +VKL +TE L L+ +F+ G LF L ++E T E E+A +L
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALD 140
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LHS I +RD+K NILL+E+ K+ DFG SK ID GT Y+ PE
Sbjct: 141 HLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPE 196
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
T +D +SFGV++ E+LTG P
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 17/210 (8%)
Query: 85 FNVNRILGQGGQGTVY---KGMLADGR----IVAVKKSKIVHEGKLEEFINEVVILSQIN 137
F + ++LGQG G V+ K +D R + +KK+ + ++ + E IL ++N
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEVN 84
Query: 138 HRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
H +VKL +TE L L+ +F+ G LF L ++E T E E+A +L
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALD 140
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LHS + I +RD+K NILL+E+ K+ DFG SK ID GT Y+ PE
Sbjct: 141 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPE 196
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
T +D +SFGV++ E+LTG P
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD-GRIVAVK---KSKIVHEGKLEEFINEVVILSQINH 138
D+F R+LG+G G V + + G + AVK K I+ + +E + E ILS +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 139 RNVVKLLGCCLETEVPLL-VYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGSLS 196
+ L CC +T L V EF++ G L ++ ++ F E R R A E+ +L
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-KSRRFD---EARARFYAAEIISALM 138
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LH I +RD+K N+LL+ + K+ADFG K + + T GT Y+ PE
Sbjct: 139 FLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-TTATFCGTPDYIAPE 194
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ + D ++ GV+L E+L G P
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 149
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 85 FNVNRILGQGG-QGTVYKGMLADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
VKL + E + NG L +Y+ F T R A E+ +L YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETC-TRFYTA-EIVSALEYLHG 148
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYFR 259
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 33/233 (14%)
Query: 83 DHFNVNRILGQGGQGTVYK----GMLADGRI--VAVKKSK-IVHEGKLEEFINEVVILSQ 135
++ ++LG G G V G+ G VAVK K + E ++E+ +++Q
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 136 I-NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFP---------------- 178
+ +H N+V LLG C + L++E+ G L YL + E+F
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 179 ----LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKF 234
LT+E L A +VA + +L + + HRD+ + N+L+ K+ DFG ++
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 235 IVIDQTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
I+ D +V + ++ PE G +T KSDV+S+G++L E+ + G P
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 131
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 132 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
VKL + E + NG L +Y+ F T R A E+ +L YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETC-TRFYTA-EIVSALEYLHG 148
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYFR 259
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 17/210 (8%)
Query: 85 FNVNRILGQGGQGTVY---KGMLADGR----IVAVKKSKIVHEGKLEEFINEVVILSQIN 137
F + ++LGQG G V+ K +D R + +KK+ + ++ + E IL ++N
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEVN 85
Query: 138 HRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
H +VKL +TE L L+ +F+ G LF L ++E T E E+A +L
Sbjct: 86 HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALD 141
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LHS + I +RD+K NILL+E+ K+ DFG SK ID GT Y+ PE
Sbjct: 142 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPE 197
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
T +D +SFGV++ E+LTG P
Sbjct: 198 VVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 56 LQQQLTSSDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-IVAVK- 113
+Q+ + +S G+ D T+ D F + R LG+G G VY IVA+K
Sbjct: 2 MQKVMENSSGTPD----ILTRHF--TIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKV 55
Query: 114 --KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLH 171
KS+I EG + E+ I + ++H N+++L + L+ E+ G L++ L
Sbjct: 56 LFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ 115
Query: 172 DQ---NEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVAD 228
+E+ T I E+A +L Y H + HRDIK N+LL K K+AD
Sbjct: 116 KSCTFDEQRTAT------IMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIAD 166
Query: 229 FGTSKFIVIDQTHVTTKVQ-GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
FG S + + K GT YL PE +K D++ GV+ ELL G P
Sbjct: 167 FGWS----VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
VKL + E + NG L +Y+ F T R A E+ +L YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETC-TRFYTA-EIVSALEYLHG 148
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYFR 259
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
VKL + E + NG L +Y+ F T R A E+ +L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETC-TRFYTA-EIVSALEYLHG 150
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYFR 259
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 149
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 150
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 152
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 153 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 150
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
VKL + E + NG L +Y+ F T R A E+ +L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETC-TRFYTA-EIVSALEYLHG 150
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYFR 259
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 149
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 146
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 124/263 (47%), Gaps = 30/263 (11%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQI 136
H R+L G+G K LA G+ VAV+ K+++ + L++ EV I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVL 70
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAG 193
NH N+VKL +ETE L LV E+ S G +F YL H + +E + R ++
Sbjct: 71 NHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
++ Y H I HRD+K+ N+LL+ K+ADFG S T G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYA 179
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI---ILTGSKEATGLAAY---FILSME 306
PE F+ ++ DV+S GV+L L++G P L +E Y F +S +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 307 -ENRLYDFLDDQVLKVGQKEEIM 328
EN L FL K G E+IM
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 78 LDKATDHFNVNRILGQGGQGTVYK-GMLADGRIVAVKKSKI--VHEGKLEEFINEVVILS 134
+ + + V +G G G K +DG+I+ K+ + E + + ++EV +L
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 135 QINHRNVVKLLGCCLE-TEVPL-LVYEFISNGTLFQYLHDQNEEFP-LTWEMRLRIATEV 191
++ H N+V+ ++ T L +V E+ G L + +E L E LR+ T++
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 192 AGSLSYLH--SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+L H S + HRD+K N+ L+ K K+ DFG ++ + D + T V GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GT 179
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
Y+ PE + +KSD++S G +L EL P KE G + E +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG-------KIREGK 232
Query: 310 L----YDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
Y + D+ + + TR LNL RP+++E+
Sbjct: 233 FRRIPYRYSDE-------------LNEIITRMLNLKDYHRPSVEEI 265
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F +ILG+G TV LA R A+K K I+ E K+ E ++S+++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLSYLH 199
VKL + E + NG L +Y+ E R T E+ +L YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLH 146
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV-TTKVQGTFGYLDPEYF 258
I HRD+K NILLNE ++ DFGT+K + + GT Y+ PE
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
SD+++ G ++ +L+ G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 124/263 (47%), Gaps = 30/263 (11%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQI 136
H R+L G+G K LA G+ VAV+ K+++ + L++ EV I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVL 70
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAG 193
NH N+VKL +ETE L LV E+ S G +F YL H + +E + R ++
Sbjct: 71 NHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
++ Y H I HRD+K+ N+LL+ K+ADFG S + G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYA 179
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPII---LTGSKEATGLAAY---FILSME 306
PE F+ ++ DV+S GV+L L++G P L +E Y F +S +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 307 -ENRLYDFLDDQVLKVGQKEEIM 328
EN L FL K G E+IM
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 122/263 (46%), Gaps = 30/263 (11%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQI 136
H R+L G+G K LA G+ VAVK K+++ + L++ EV I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVL 70
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAG 193
NH N+VKL +ETE L LV E+ S G +F YL H + +E + R ++
Sbjct: 71 NHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
++ Y H I HRD+K+ N+LL+ K+ADFG S G Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYA 179
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPII---LTGSKEATGLAAY---FILSME 306
PE F+ ++ DV+S GV+L L++G P L +E Y F +S +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 307 -ENRLYDFLDDQVLKVGQKEEIM 328
EN L FL K G E+IM
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 81 ATD---HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEV 130
ATD H R+ G+G K LA GR VAVK K+++ + L++ EV
Sbjct: 7 ATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKLFREV 65
Query: 131 VILSQINHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRI 187
I+ +NH N+VKL +ETE L LV E+ S G +F YL H + +E + R
Sbjct: 66 RIMKILNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 121
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
++ ++ Y H I HRD+K+ N+LL+ K+ADFG S + T
Sbjct: 122 --QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FC 174
Query: 248 GTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
G+ Y PE F+ ++ DV+S GV+L L++G P
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 123/263 (46%), Gaps = 30/263 (11%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQI 136
H R+L G+G K LA G+ VAVK K+++ + L++ EV I+ +
Sbjct: 5 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVL 63
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAG 193
NH N+VKL +ETE L LV E+ S G +F YL H +E + R ++
Sbjct: 64 NHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVS 117
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
++ Y H I HRD+K+ N+LL+ K+ADFG S T G+ Y
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYA 172
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPII---LTGSKEATGLAAY---FILSME 306
PE F+ ++ DV+S GV+L L++G P L +E Y F +S +
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 232
Query: 307 -ENRLYDFLDDQVLKVGQKEEIM 328
EN L FL K G E+IM
Sbjct: 233 CENLLKKFLILNPSKRGTLEQIM 255
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 36/254 (14%)
Query: 107 GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTL 166
G+ VAVKK + + + E NEVVI+ +H NVV + L + +V EF+ G L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 167 FQYL-HDQ-NEEFPLTWEMRLRIAT---EVAGSLSYLHSAASMPIYHRDIKSTNILLNEK 221
+ H + NEE +IAT V +LSYLH+ + HRDIKS +ILL
Sbjct: 130 TDIVTHTRMNEE---------QIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSD 177
Query: 222 YTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
K++DFG V + + GT ++ PE + + D++S G++++E++
Sbjct: 178 GRIKLSDFGFCA-QVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 236
Query: 282 GQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLN 341
G+ P +A R+ D L +V +++ ++++ L+L
Sbjct: 237 GEPPYFNEPPLQAM------------RRIRDSLPPRV------KDLHKVSSVLRGFLDLM 278
Query: 342 GKRRPTMKEVAMEL 355
R P+ + A EL
Sbjct: 279 LVREPSQRATAQEL 292
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 84 HFNVNRILGQGGQGTV---YKGMLAD--GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H LG+G G+V L D G +VAVK+ + + +F E+ IL ++
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 67
Query: 139 RNVVKLLGCCLETEVP--LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
+VK G P LV E++ +G L +L Q L L ++++ +
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGME 125
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG--TFGYLD 254
YL S + HRD+ + NIL+ + K+ADFG +K + +D+ + G +
Sbjct: 126 YLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA 182
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLT 281
PE F+ +SDV+SFGVVL EL T
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 25/261 (9%)
Query: 22 GGYRCITPKRKVYIIKREDIKLKEKFFKRNGGLVLQQQLTSSDGSIDRCKLFTTKELDKA 81
GG+ I+P+ ++ +L + + K N GL Q+L+ S K + +
Sbjct: 128 GGF-YISPRSTFSTLQ----ELVDHYKKGNDGLC--QKLSVPCMSSKPQKPWEKDAWEIP 180
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNV 141
+ + + LG G G V+ VAVK K +E F+ E ++ + H +
Sbjct: 181 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKL 239
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLH-DQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
VKL + + ++ EF++ G+L +L D+ + PL + + ++A ++++
Sbjct: 240 VKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ 296
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRS 260
+ HRD+++ NIL++ K+ADFG ++ + + PE
Sbjct: 297 RNYI---HRDLRAANILVSASLVCKIADFGLAR----------VGAKFPIKWTAPEAINF 343
Query: 261 GQFTDKSDVYSFGVVLVELLT 281
G FT KSDV+SFG++L+E++T
Sbjct: 344 GSFTIKSDVWSFGILLMEIVT 364
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 82 TDHFNVNRILGQGGQGTVYK-GMLADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINH 138
+ + V +G G G K +DG+I+ K+ + E + + ++EV +L ++ H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 139 RNVVKLLGCCLE-TEVPL-LVYEFISNGTLFQYLHDQNEEFP-LTWEMRLRIATEVAGSL 195
N+V+ ++ T L +V E+ G L + +E L E LR+ T++ +L
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 196 SYLH--SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
H S + HRD+K N+ L+ K K+ DFG ++ + D + V GT Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYM 183
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRL--- 310
PE + +KSD++S G +L EL P KE G + E +
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG-------KIREGKFRRI 236
Query: 311 -YDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
Y + D+ + + TR LNL RP+++E+
Sbjct: 237 PYRYSDE-------------LNEIITRMLNLKDYHRPSVEEI 265
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQI 136
H R+L G+G K LA G+ VAVK K+++ + L++ EV I +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVL 70
Query: 137 NHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAG 193
NH N+VKL +ETE L LV E+ S G +F YL H + +E + R ++
Sbjct: 71 NHPNIVKLFE-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVS 124
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
++ Y H I HRD+K+ N+LL+ K+ADFG S G Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYA 179
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
PE F+ ++ DV+S GV+L L++G P
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 10/224 (4%)
Query: 77 ELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQ 135
E D D +LG+G G VY G L++ +A+K+ + E+ +
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
+ H+N+V+ LG E + E + G+L L + + ++ L
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
YLH I HRDIK N+L+N Y+ K++DFGTSK + T GT Y+
Sbjct: 136 KYLHDNQ---IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYM 190
Query: 254 DPEYFRSGQ--FTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
PE G + +D++S G ++E+ TG+ P G +A
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 234
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 82 TDHFNVNRILGQGGQGTVYK-GMLADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINH 138
+ + V +G G G K +DG+I+ K+ + E + + ++EV +L ++ H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 139 RNVVKLLGCCLE-TEVPL-LVYEFISNGTLFQYLHDQNEEFP-LTWEMRLRIATEVAGSL 195
N+V+ ++ T L +V E+ G L + +E L E LR+ T++ +L
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 196 SYLH--SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
H S + HRD+K N+ L+ K K+ DFG ++ + D+ V GT Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYM 183
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRL--- 310
PE + +KSD++S G +L EL P KE G + E +
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG-------KIREGKFRRI 236
Query: 311 -YDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
Y + D+ + + TR LNL RP+++E+
Sbjct: 237 PYRYSDE-------------LNEIITRMLNLKDYHRPSVEEI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFINEVVIL 133
K +D+++V LG+G V + G+ +I+ KK KLE E I
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARIC 58
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
++ H N+V+L E LV++ ++ G LF+ + EF + I ++
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI-QQILE 115
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKY---TAKVADFGTSKFIVIDQTHVTTKVQGTF 250
S++Y HS I HR++K N+LL K K+ADFG + I ++ + GT
Sbjct: 116 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 170
Query: 251 GYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GYL PE + ++ D+++ GV+L LL G P
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
+G+G G VYK + GRIVA+K+ ++ EG I E+ +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
LV+EF+ + + D+N+ ++++ + + G +++ H I H
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRG-VAHCHQHR---ILH 142
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR-SGQFTDKS 267
RD+K N+L+N K+ADFG ++ I T +V T Y P+ S +++
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSV 201
Query: 268 DVYSFGVVLVELLTGQKPII 287
D++S G + E++TG KP+
Sbjct: 202 DIWSIGCIFAEMITG-KPLF 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFINEVVIL 133
K +D+++V LG+G V + G+ +I+ KK KLE E I
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARIC 59
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
++ H N+V+L E LV++ ++ G LF+ + EF + I ++
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI-QQILE 116
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKY---TAKVADFGTSKFIVIDQTHVTTKVQGTF 250
S++Y HS I HR++K N+LL K K+ADFG + I ++ + GT
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 171
Query: 251 GYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GYL PE + ++ D+++ GV+L LL G P
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
+G+G G VYK + GRIVA+K+ ++ EG I E+ +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
LV+EF+ + + D+N+ ++++ + + G +++ H I H
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRG-VAHCHQHR---ILH 142
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR-SGQFTDKS 267
RD+K N+L+N K+ADFG ++ I T +V T Y P+ S +++
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSV 201
Query: 268 DVYSFGVVLVELLTGQKPI 286
D++S G + E++TG KP+
Sbjct: 202 DIWSIGCIFAEMITG-KPL 219
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 67 IDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHE 120
+ R F K +D+++V LG+G V + G+ +I+ KK
Sbjct: 13 MGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF 72
Query: 121 GKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLT 180
KLE E I ++ H N+V+L E LV++ ++ G LF+ + EF
Sbjct: 73 QKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSE 127
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKY---TAKVADFGTSKFIVI 237
+ I ++ S++Y HS I HR++K N+LL K K+ADFG + I +
Sbjct: 128 ADASHCI-QQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEV 181
Query: 238 DQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ + GT GYL PE + ++ D+++ GV+L LL G P
Sbjct: 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFINEVVIL 133
K +D+++V LG+G V + G+ +I+ KK KLE E I
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARIC 59
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
++ H N+V+L E LV++ ++ G LF+ + EF + I ++
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI-QQILE 116
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKY---TAKVADFGTSKFIVIDQTHVTTKVQGTF 250
S++Y HS I HR++K N+LL K K+ADFG + I ++ + GT
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 171
Query: 251 GYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GYL PE + ++ D+++ GV+L LL G P
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 10/224 (4%)
Query: 77 ELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQ 135
E D D +LG+G G VY G L++ +A+K+ + E+ +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
+ H+N+V+ LG E + E + G+L L + + ++ L
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
YLH I HRDIK N+L+N Y+ K++DFGTSK + T GT Y+
Sbjct: 122 KYLHDNQ---IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYM 176
Query: 254 DPEYFRSGQ--FTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
PE G + +D++S G ++E+ TG+ P G +A
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 220
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 33/284 (11%)
Query: 90 ILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFI--NEVVILSQINHRNVVKLLG 146
++G+G G V K D GRIVA+KK + K+ + I E+ +L Q+ H N+V LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 147 CCLETEVPLLVYEFISNGTLFQYLHDQNEEFP--LTWEMRLRIATEVAGSLSYLHSAASM 204
C + + LV+EF+ + L D E FP L +++ + ++ + + HS
Sbjct: 92 VCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN-- 144
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSG-QF 263
I HRDIK NIL+++ K+ DFG ++ + +V T Y PE ++
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVGDVKY 202
Query: 264 TDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFI----LSMEENRLYD----FLD 315
DV++ G ++ E+ G+ + G + L + L L++ F
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEP--LFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 316 DQVLKVGQKEEI--------MTIATLATRCLNLNGKRRPTMKEV 351
++ ++ ++E + + LA +CL+++ +RP E+
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 84 HFNVNRILGQGGQGTV---YKGMLAD--GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H LG+G G+V L D G +VAVK+ + + +F E+ IL ++
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 71
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
+VK G + LV E++ +G L +L Q L L ++++ +
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGME 129
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT---FGYL 253
YL S + HRD+ + NIL+ + K+ADFG +K + +D+ + + G F Y
Sbjct: 130 YLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 186
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT 281
PE F+ +SDV+SFGVVL EL T
Sbjct: 187 -PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 84 HFNVNRILGQGGQGTV---YKGMLAD--GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H LG+G G+V L D G +VAVK+ + + +F E+ IL ++
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 70
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
+VK G + LV E++ +G L +L Q L L ++++ +
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGME 128
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT---FGYL 253
YL S + HRD+ + NIL+ + K+ADFG +K + +D+ + + G F Y
Sbjct: 129 YLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 185
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT 281
PE F+ +SDV+SFGVVL EL T
Sbjct: 186 -PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 27/208 (12%)
Query: 90 ILGQGGQGTVYKG-MLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
++G GG G V+K DG+ +K+ K +E K E EV L++++H N+V GC
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-KAE---REVKALAKLDHVNIVHYNGCW 73
Query: 149 ----------------LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
+T+ + EF GTL Q++ + E L + L + ++
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQIT 132
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
+ Y+HS + +RD+K +NI L + K+ DFG + D +K GT Y
Sbjct: 133 KGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK--GTLRY 187
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELL 280
+ PE S + + D+Y+ G++L ELL
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 84 HFNVNRILGQGGQGTV---YKGMLAD--GRIVAVKKSKIVHEGKLEEFINEVVILSQINH 138
H LG+G G+V L D G +VAVK+ + + +F E+ IL ++
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 83
Query: 139 RNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
+VK G + LV E++ +G L +L Q L L ++++ +
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGME 141
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT---FGYL 253
YL S + HRD+ + NIL+ + K+ADFG +K + +D+ + + G F Y
Sbjct: 142 YLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 198
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLT 281
PE F+ +SDV+SFGVVL EL T
Sbjct: 199 -PESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVH----EGKLEEFINEVVILSQINH 138
D F LG G G V K ++ +K ++H + I E+ +L + N
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARK--LIHLEIKPAIRNQIIRELQVLHECNS 73
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYL 198
+V G + E + G+L Q L + + E+ +++ V L+YL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYL 130
Query: 199 HSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRD+K +NIL+N + K+ DFG S ++ + GT Y+ PE
Sbjct: 131 REKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMAPERL 185
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
+ ++ +SD++S G+ LVEL G+ PI +KE + ++ EE +
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPH 238
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 85 FNVNRILGQGGQGTVYK----GMLADGRIVAVK---KSKIVHEGKLEEFIN-EVVILSQI 136
F + R+LG+GG G V++ G+I A+K K+ IV K E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
H +V L+ L+ E++S G LF L + T L E++ +L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL---AEISMALG 135
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LH I +RD+K NI+LN + K+ DFG K + D T VT GT Y+ PE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPE 191
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
D +S G ++ ++LTG P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 95 GQGTVYKGMLA----DGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
G+G+ K +L DGR +K+ I + + EE EV +L+ + H N+V+
Sbjct: 33 GEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF 92
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQ-----NEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
E +V ++ G LF+ ++ Q E+ L W +++ +A L ++H
Sbjct: 93 EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDRK- 145
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQF 263
I HRDIKS NI L + T ++ DFG ++ ++ + GT YL PE + +
Sbjct: 146 --ILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNSTVELARACIGTPYYLSPEICENKPY 202
Query: 264 TDKSDVYSFGVVLVELLT 281
+KSD+++ G VL EL T
Sbjct: 203 NNKSDIWALGCVLYELCT 220
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 29/221 (13%)
Query: 84 HFNVNRILGQGGQGTVY----KGMLADGRIVAVKKSKIVHEGKL-----------EEFIN 128
+F V R LG G G V K ++ I +KKS+ +G+ EE N
Sbjct: 38 YFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQF-DKGRYSDDNKNIEKFHEEIYN 95
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E+ +L ++H N++KL + + LV EF G LF+ + ++++ I
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD---AANIM 152
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT---AKVADFGTSKFIVIDQTHVTTK 245
++ + YLH I HRDIK NILL K + K+ DFG S F D +
Sbjct: 153 KQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRD 207
Query: 246 VQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT Y+ PE + ++ +K DV+S GV++ LL G P
Sbjct: 208 RLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 85 FNVNRILGQGGQGTVYK----GMLADGRIVAVK---KSKIVHEGKLEEFIN-EVVILSQI 136
F + R+LG+GG G V++ G+I A+K K+ IV K E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
H +V L+ L+ E++S G LF L + T L E++ +L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL---AEISMALG 135
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LH I +RD+K NI+LN + K+ DFG K + D T VT GT Y+ PE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPE 191
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
D +S G ++ ++LTG P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL----------EEFINEVVI 132
D F LG G G V+K V+ K S +V KL + I E+ +
Sbjct: 33 DDFEKISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 84
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L + N +V G + E + G+L Q L + ++ +++ V
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 141
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
L+YL I HRD+K +NIL+N + K+ DFG S ++ + GT Y
Sbjct: 142 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSY 196
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ PE + ++ +SD++S G+ LVE+ G+ PI +KE
Sbjct: 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 107 GRIVAVKKSKI-VHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVP--LLVYEFISN 163
G +VAVK K + E+ IL + H +++K GCC + LV E++
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 164 GTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
G+L YL + + L A ++ ++YLH+ + HRD+ + N+LL+
Sbjct: 120 GSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHYI---HRDLAARNVLLDNDRL 172
Query: 224 AKVADFGTSKFIVIDQTHVTTKVQ-----GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVE 278
K+ DFG +K + + H +V+ F Y PE + +F SDV+SFGV L E
Sbjct: 173 VKIGDFGLAK--AVPEGHEXYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYE 229
Query: 279 LLT 281
LLT
Sbjct: 230 LLT 232
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL----------EEFINEVVI 132
D F LG G G V+K V+ K S +V KL + I E+ +
Sbjct: 68 DDFEKISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 119
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L + N +V G + E + G+L Q L + ++ +++ V
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 176
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
L+YL I HRD+K +NIL+N + K+ DFG S ++ + GT Y
Sbjct: 177 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSY 231
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ PE + ++ +SD++S G+ LVE+ G+ PI +KE
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL----------EEFINEVVI 132
D F LG G G V+K V+ K S +V KL + I E+ +
Sbjct: 6 DDFEKISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L + N +V G + E + G+L Q L + ++ +++ V
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 114
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
L+YL I HRD+K +NIL+N + K+ DFG S ++ + GT Y
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSY 169
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ PE + ++ +SD++S G+ LVE+ G+ PI +KE
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL----------EEFINEVVI 132
D F LG G G V+K V+ K S +V KL + I E+ +
Sbjct: 6 DDFEKISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L + N +V G + E + G+L Q L + ++ +++ V
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 114
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
L+YL I HRD+K +NIL+N + K+ DFG S ++ + GT Y
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSY 169
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ PE + ++ +SD++S G+ LVE+ G+ PI +KE
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL----------EEFINEVVI 132
D F LG G G V+K V+ K S +V KL + I E+ +
Sbjct: 6 DDFEKISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L + N +V G + E + G+L Q L + ++ +++ V
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 114
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
L+YL I HRD+K +NIL+N + K+ DFG S ++ + GT Y
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSY 169
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ PE + ++ +SD++S G+ LVE+ G+ PI +KE
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL----------EEFINEVVI 132
D F LG G G V+K V+ K S +V KL + I E+ +
Sbjct: 6 DDFEKISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L + N +V G + E + G+L Q L + ++ +++ V
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 114
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
L+YL I HRD+K +NIL+N + K+ DFG S ++ + GT Y
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSY 169
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ PE + ++ +SD++S G+ LVE+ G+ PI +KE
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL----------EEFINEVVILSQINHRN 140
LG G G V+K V+ K S +V KL + I E+ +L + N
Sbjct: 14 LGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHS 200
+V G + E + G+L Q L + ++ +++ V L+YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLRE 122
Query: 201 AASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRS 260
I HRD+K +NIL+N + K+ DFG S ++ + GT Y+ PE +
Sbjct: 123 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQG 177
Query: 261 GQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
++ +SD++S G+ LVE+ G+ PI +KE
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 107 GRIVAVKKSKI-VHEGKLEEFINEVVILSQINHRNVVKLLGCCLET-EVPL-LVYEFISN 163
G +VAVK K + E+ IL + H +++K GCC + E L LV E++
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 164 GTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
G+L YL + + L A ++ ++YLHS + HR++ + N+LL+
Sbjct: 103 GSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHSQHYI---HRNLAARNVLLDNDRL 155
Query: 224 AKVADFGTSKFIVIDQTHVTTKVQG---TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELL 280
K+ DFG +K + + + G F Y PE + +F SDV+SFGV L ELL
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELL 214
Query: 281 T 281
T
Sbjct: 215 T 215
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 90 ILGQGGQGTVYKGMLA-DG-RI-VAVKKSK-IVHEGKLEEFINEVVILSQINHR-NVVKL 144
++G+G G V K + DG R+ A+K+ K + +F E+ +L ++ H N++ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQN--EEFP-----------LTWEMRLRIATEV 191
LG C L E+ +G L +L E P L+ + L A +V
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
A + YL + HRD+ + NIL+ E Y AK+ADFG S+ Q K G
Sbjct: 142 ARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRLP 194
Query: 252 --YLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
++ E +T SDV+S+GV+L E+++
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 90 ILGQGGQGTVYKGMLA-DG-RI-VAVKKSK-IVHEGKLEEFINEVVILSQINHR-NVVKL 144
++G+G G V K + DG R+ A+K+ K + +F E+ +L ++ H N++ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQN--EEFP-----------LTWEMRLRIATEV 191
LG C L E+ +G L +L E P L+ + L A +V
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
A + YL + HRD+ + NIL+ E Y AK+ADFG S+ Q K G
Sbjct: 152 ARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRLP 204
Query: 252 --YLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
++ E +T SDV+S+GV+L E+++
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGR-------IVAVKKSKIVHEGKLEEFINEVVILSQIN 137
F ++++LG+G G V+ LA+ + I A+KK ++ + +E + E +LS
Sbjct: 20 FELHKMLGKGSFGKVF---LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 138 HRNVVKLLGCCLET-EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
+ + C +T E V E+++ G L ++ ++ F L+ A E+ L
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLS--RATFYAAEIILGLQ 133
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LHS I +RD+K NILL++ K+ADFG K ++ T + GT Y+ PE
Sbjct: 134 FLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYIAPE 189
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
++ D +SFGV+L E+L GQ P
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 90 ILGQGGQGTVYKG-MLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
++G GG G V+K DG+ +++ K +E K E EV L++++H N+V GC
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE-KAE---REVKALAKLDHVNIVHYNGCW 74
Query: 149 -----------------------------LETEVPLLVYEFISNGTLFQYLHDQNEEFPL 179
+T+ + EF GTL Q++ + E L
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KL 133
Query: 180 TWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQ 239
+ L + ++ + Y+HS + HRD+K +NI L + K+ DFG + D
Sbjct: 134 DKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELL 280
T+ +GT Y+ PE S + + D+Y+ G++L ELL
Sbjct: 191 KR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKS-KIVHEGKLEEFINEVVIL 133
T++L+ D + + LG G G VYK + ++A K E +LE+++ E+ IL
Sbjct: 30 TRDLN-PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
+ +H N+VKLL ++ EF + G + + + E PLT + +
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLD 146
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ------ 247
+L+YLH I HRD+K+ NIL K+ADFG S T +Q
Sbjct: 147 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDXFI 196
Query: 248 GTFGYLDPEYF-----RSGQFTDKSDVYSFGVVLVELLTGQKP 285
GT ++ PE + + K+DV+S G+ L+E+ + P
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 80 KATDHFNVNRILGQGGQGTVYKGMLADGR-------IVAVKKSKIVHEGKLEEFINEVVI 132
K TD FN +LG+G G V MLAD + I +KK ++ + +E + E +
Sbjct: 17 KLTD-FNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRV 72
Query: 133 LSQINHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
L+ ++ + L C +T L V E+++ G L ++ + + A E+
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEI 129
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
+ L +LH I +RD+K N++L+ + K+ADFG K ++D T + GT
Sbjct: 130 SIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-TTREFCGTPD 185
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
Y+ PE + D +++GV+L E+L GQ P
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKS-KIVHEGKLEEFINEVVIL 133
T++L+ D + + LG G G VYK + ++A K E +LE+++ E+ IL
Sbjct: 30 TRDLN-PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
+ +H N+VKLL ++ EF + G + + + E PLT + +
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLD 146
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ------ 247
+L+YLH I HRD+K+ NIL K+ADFG S T +Q
Sbjct: 147 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDSFI 196
Query: 248 GTFGYLDPEYF-----RSGQFTDKSDVYSFGVVLVELLTGQKP 285
GT ++ PE + + K+DV+S G+ L+E+ + P
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQI-NHRNVV 142
F + ++G G G VYKG + G++ A+K + + + EE E+ +L + +HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 143 KLLGCCLETEVP------LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
G ++ P LV EF G++ + + L E I E+ LS
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT-LKEEWIAYICREILRGLS 143
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LH + HRDIK N+LL E K+ DFG S + T + GT ++ PE
Sbjct: 144 HLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPE 199
Query: 257 YFRSGQFTD-----KSDVYSFGVVLVELLTGQKPI 286
+ D KSD++S G+ +E+ G P+
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 39/318 (12%)
Query: 80 KATDHFNVNRILGQGGQGTV----YKGMLADGRIVAVK---KSKIVHEGKLEEFINEVVI 132
KA D ++V +++G+G G V +K A ++ A+K K +++ F E I
Sbjct: 73 KAED-YDVVKVIGRGAFGEVQLVRHK---ASQKVYAMKLLSKFEMIKRSDSAFFWEERDI 128
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
++ N VV+L + + +V E++ G L + N + P W EV
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFY--TAEVV 184
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQT---HVTTKVQGT 249
+L +HS M + HRD+K N+LL++ K+ADFGT + +D+T H T V GT
Sbjct: 185 LALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAV-GT 238
Query: 250 FGYLDPEYFRS----GQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSM 305
Y+ PE +S G + + D +S GV L E+L G P A L + M
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY------ADSLVGTYSKIM 292
Query: 306 EENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNG----KRRPTMKEVAMELERIQAL 361
+ F +D + K I T L NG K+ P K + I+
Sbjct: 293 DHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRET 352
Query: 362 QKDINVKQICDEIESCDI 379
+ V ++ +I+S +
Sbjct: 353 AAPV-VPELSSDIDSSNF 369
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 107 GRIVAVKKSKI-VHEGKLEEFINEVVILSQINHRNVVKLLGCCLET-EVPL-LVYEFISN 163
G +VAVK K + E+ IL + H +++K GCC + E L LV E++
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 164 GTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
G+L YL + + L A ++ ++YLH+ + HR++ + N+LL+
Sbjct: 103 GSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHYI---HRNLAARNVLLDNDRL 155
Query: 224 AKVADFGTSKFIVIDQTHVTTKVQG---TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELL 280
K+ DFG +K + + + G F Y PE + +F SDV+SFGV L ELL
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELL 214
Query: 281 T 281
T
Sbjct: 215 T 215
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKS-KIVHEGKLEEFINEVVIL 133
T++L+ D + + LG G G VYK + ++A K E +LE+++ E+ IL
Sbjct: 30 TRDLN-PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
+ +H N+VKLL ++ EF + G + + + E PLT + +
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLD 146
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ------ 247
+L+YLH I HRD+K+ NIL K+ADFG S T +Q
Sbjct: 147 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRTIQRRDSFI 196
Query: 248 GTFGYLDPEYF-----RSGQFTDKSDVYSFGVVLVELLTGQKP 285
GT ++ PE + + K+DV+S G+ L+E+ + P
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGMLADGR----IVAVK-KSKIVHEGKLEEFINEV 130
K+ + D ++ +LG G V +LA+ + +VA+K +K EGK NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
+L +I H N+V L L+ + +S G LF + ++ T R+ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQ 124
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNIL---LNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
V ++ YLH + I HRD+K N+L L+E ++DFG SK + D V +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 34/243 (13%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKGMLA--DGRIVAVKK-----------------S 115
KE DK + + + R L QG + +L D + A+KK
Sbjct: 23 VKEKDKYINDYRIIRTLNQGKFNKI---ILCEKDNKFYALKKYEKSLLEKKRDFTKSNND 79
Query: 116 KIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQY-----L 170
KI + K ++F NE+ I++ I + + G + ++YE++ N ++ ++ +
Sbjct: 80 KISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFV 139
Query: 171 HDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFG 230
D+N + ++ I V S SY+H+ + I HRD+K +NIL+++ K++DFG
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFG 197
Query: 231 TSKFIVIDQTHVTTKVQGTFGYLDPEYF--RSGQFTDKSDVYSFGVVLVELLTGQKPIIL 288
S+++V + + +GT+ ++ PE+F S K D++S G+ L + P L
Sbjct: 198 ESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254
Query: 289 TGS 291
S
Sbjct: 255 KIS 257
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGMLADGR----IVAVK-KSKIVHEGKLEEFINEV 130
K+ + D ++ +LG G V +LA+ + +VA+K +K EGK NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
+L +I H N+V L L+ + +S G LF + E+ T R+ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQ 124
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNIL---LNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
V ++ YLH + I HRD+K N+L L+E ++DFG SK + D V +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGMLADGR----IVAVK-KSKIVHEGKLEEFINEV 130
K+ + D ++ +LG G V +LA+ + +VA+K +K EGK NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEI 67
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
+L +I H N+V L L+ + +S G LF + E+ T R+ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQ 124
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNIL---LNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
V ++ YLH + I HRD+K N+L L+E ++DFG SK + D V +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 85 FNVNRILGQGGQGTVYKGMLAD-GRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F+V+RI+G+GG G VY AD G++ A+K K +I + +NE ++LS ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 141 VVKLLGCCLETEVP---LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
++ P + + ++ G L +L Q+ F +MR A E+ L +
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEA-DMRF-YAAEIILGLEH 307
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
+H+ + +RD+K NILL+E +++D G + + H + GT GY+ PE
Sbjct: 308 MHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEV 361
Query: 258 FRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
+ G D S D +S G +L +LL G P
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 85 FNVNRILGQGGQGTVYKGMLAD-GRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F+V+RI+G+GG G VY AD G++ A+K K +I + +NE ++LS ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 141 VVKLLGCCLETEVP---LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
++ P + + ++ G L +L Q+ F +MR A E+ L +
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEA-DMRF-YAAEIILGLEH 307
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
+H+ + +RD+K NILL+E +++D G + + H + GT GY+ PE
Sbjct: 308 MHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEV 361
Query: 258 FRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
+ G D S D +S G +L +LL G P
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGMLADGR----IVAVK-KSKIVHEGKLEEFINEV 130
K+ + D ++ +LG G V +LA+ + +VA+K +K EGK NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 131 VILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
+L +I H N+V L L+ + +S G LF + E+ T R+ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQ 124
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNIL---LNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
V ++ YLH + I HRD+K N+L L+E ++DFG SK + D V +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGML-ADGRIVAVKKSKIVHEGKLEE---FINEVVILSQINHRN 140
F R+LG+GG G V + A G++ A KK + K + +NE IL ++N R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTL-FQYLHDQNEEFPLTWEMR-LRIATEVAGSLSYL 198
VV L + LV ++ G L F H FP E R + A E+ L L
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAAEICCGLEDL 302
Query: 199 HSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
H I +RD+K NILL++ +++D G + + QT + +V GT GY+ PE
Sbjct: 303 HRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVV 357
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
++ ++T D ++ G +L E++ GQ P
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI-VHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
LG G TVYKG+ G VA+K+ K+ EG I E+ ++ ++ H N+V+L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV- 71
Query: 149 LETEVPL-LVYEFISNGTLFQYLHDQN-EEFPLTWEMRL--RIATEVAGSLSYLHSAASM 204
+ TE L LV+EF+ N L +Y+ + P E+ L ++ L++ H
Sbjct: 72 IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-- 128
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR-SGQF 263
I HRD+K N+L+N++ K+ DFG ++ I +++V T Y P+ S +
Sbjct: 129 -ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTY 186
Query: 264 TDKSDVYSFGVVLVELLTGQKPII 287
+ D++S G +L E++TG KP+
Sbjct: 187 STSIDIWSCGCILAEMITG-KPLF 209
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 85 FNVNRILGQGGQGTVYKGMLAD-GRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F+V+RI+G+GG G VY AD G++ A+K K +I + +NE ++LS ++ +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 141 VVKLLGCCLETEVP---LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
++ P + + ++ G L +L Q+ F +MR A E+ L +
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEA-DMRF-YAAEIILGLEH 306
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
+H+ + +RD+K NILL+E +++D G + + H + GT GY+ PE
Sbjct: 307 MHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEV 360
Query: 258 FRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
+ G D S D +S G +L +LL G P
Sbjct: 361 LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 40/307 (13%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVA-------VKKSKIVHEGKLEEFINEVVILS 134
+D + R+LG+G G V +L +I + K ++ + E + EV +L
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 135 QINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
Q++H N++KL + LV E + G LF + + + RI +V
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSG 138
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEK---YTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
++Y+H I HRD+K N+LL K ++ DFG S + + K+ GT
Sbjct: 139 ITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 193
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
Y+ PE G + +K DV+S GV+L LL+G P G Y IL E Y
Sbjct: 194 YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPF--------NGANEYDILKKVEKGKY 244
Query: 312 DFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQIC 371
F Q KV + + L + L R + ++ A++ E IQ K+ QI
Sbjct: 245 TFELPQWKKVSE-----SAKDLIRKMLTYVPSMRISARD-ALDHEWIQTYTKE----QIS 294
Query: 372 DEIESCD 378
++ S D
Sbjct: 295 VDVPSLD 301
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 85 FNVNRILGQGGQGTVYKGMLAD-GRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRN 140
F+V+RI+G+GG G VY AD G++ A+K K +I + +NE ++LS ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 141 VVKLLGCCLETEVP---LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
++ P + + ++ G L +L Q+ F +MR A E+ L +
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEA-DMRF-YAAEIILGLEH 307
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
+H+ + +RD+K NILL+E +++D G + + H + GT GY+ PE
Sbjct: 308 MHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEV 361
Query: 258 FRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
+ G D S D +S G +L +LL G P
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGR-------IVAVKKSKIVHEGKLEEFINEVVILSQIN 137
F ++++LG+G G V+ LA+ + I A+KK ++ + +E + E +LS
Sbjct: 19 FILHKMLGKGSFGKVF---LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 138 HRNVVKLLGCCLETEVPLL-VYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
+ + C +T+ L V E+++ G L ++ ++ F L+ A E+ L
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLS--RATFYAAEIILGLQ 132
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LHS I +RD+K NILL++ K+ADFG K ++ T GT Y+ PE
Sbjct: 133 FLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYIAPE 188
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
++ D +SFGV+L E+L GQ P
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 35/216 (16%)
Query: 90 ILGQGGQGTVYK------GMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHR-N 140
++G+G G V K G+ D I +K+ SK H +F E+ +L ++ H N
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR----DFAGELEVLCKLGHHPN 84
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQN--EEFP-----------LTWEMRLRI 187
++ LLG C L E+ +G L +L E P L+ + L
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
A +VA + YL + HR++ + NIL+ E Y AK+ADFG S+ Q K
Sbjct: 145 AADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVKKTM 197
Query: 248 GTFG--YLDPEYFRSGQFTDKSDVYSFGVVLVELLT 281
G ++ E +T SDV+S+GV+L E+++
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 107 GRIVAVKKSKIVHEGKLEE-FINEVVILSQINHRNVVKLLGCCLET--EVPLLVYEFISN 163
G +VAVK K +L + E+ IL + H ++VK GCC + + LV E++
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 164 GTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
G+L YL + L A ++ ++YLH+ + HR + + N+LL+
Sbjct: 98 GSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHYI---HRALAARNVLLDNDRL 150
Query: 224 AKVADFGTSKFIVIDQTHVTTKVQG---TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELL 280
K+ DFG +K + + + G F Y PE + +F SDV+SFGV L ELL
Sbjct: 151 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKECKFYYASDVWSFGVTLYELL 209
Query: 281 T 281
T
Sbjct: 210 T 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 107 GRIVAVKKSKIVHEGKLEE-FINEVVILSQINHRNVVKLLGCCLET--EVPLLVYEFISN 163
G +VAVK K +L + E+ IL + H ++VK GCC + + LV E++
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 164 GTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYT 223
G+L YL + L A ++ ++YLH+ + HR + + N+LL+
Sbjct: 97 GSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHYI---HRALAARNVLLDNDRL 149
Query: 224 AKVADFGTSKFIVIDQTHVTTKVQG---TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELL 280
K+ DFG +K + + + G F Y PE + +F SDV+SFGV L ELL
Sbjct: 150 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKECKFYYASDVWSFGVTLYELL 208
Query: 281 T 281
T
Sbjct: 209 T 209
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 15/230 (6%)
Query: 79 DKATDHFNVNRILGQGGQGTVYKGMLAD-GRIVAVK---KSKIVHEGKLEEFINEVVILS 134
D DHF + R +G+G G V D ++ A+K K K V ++ E+ I+
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70
Query: 135 QINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
+ H +V L + E +V + + G L +L QN F ++L I E+ +
Sbjct: 71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEE-TVKLFIC-ELVMA 127
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L YL + I HRD+K NILL+E + DF + ++ +T +TT + GT Y+
Sbjct: 128 LDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAA-MLPRETQITT-MAGTKPYMA 182
Query: 255 PEYFRSGQ---FTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYF 301
PE F S + ++ D +S GV ELL G++P + S + + F
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 40/307 (13%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVA-------VKKSKIVHEGKLEEFINEVVILS 134
+D + R+LG+G G V +L +I + K ++ + E + EV +L
Sbjct: 49 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 135 QINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
Q++H N++KL + LV E + G LF + + + RI +V
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSG 162
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEK---YTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
++Y+H I HRD+K N+LL K ++ DFG S + + K+ GT
Sbjct: 163 ITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 217
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
Y+ PE G + +K DV+S GV+L LL+G P G Y IL E Y
Sbjct: 218 YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPF--------NGANEYDILKKVEKGKY 268
Query: 312 DFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQIC 371
F Q KV + + L + L R + ++ A++ E IQ K+ QI
Sbjct: 269 TFELPQWKKVSE-----SAKDLIRKMLTYVPSMRISARD-ALDHEWIQTYTKE----QIS 318
Query: 372 DEIESCD 378
++ S D
Sbjct: 319 VDVPSLD 325
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 40/307 (13%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVA-------VKKSKIVHEGKLEEFINEVVILS 134
+D + R+LG+G G V +L +I + K ++ + E + EV +L
Sbjct: 48 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 135 QINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
Q++H N++KL + LV E + G LF + + + RI +V
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSG 161
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEK---YTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
++Y+H I HRD+K N+LL K ++ DFG S + + K+ GT
Sbjct: 162 ITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 216
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
Y+ PE G + +K DV+S GV+L LL+G P G Y IL E Y
Sbjct: 217 YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPF--------NGANEYDILKKVEKGKY 267
Query: 312 DFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQIC 371
F Q KV + + L + L R + ++ A++ E IQ K+ QI
Sbjct: 268 TFELPQWKKVSE-----SAKDLIRKMLTYVPSMRISARD-ALDHEWIQTYTKE----QIS 317
Query: 372 DEIESCD 378
++ S D
Sbjct: 318 VDVPSLD 324
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL----------EEFINEVVI 132
D F LG G G V+K V+ K S +V KL + I E+ +
Sbjct: 25 DDFEKISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 76
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L + N +V G + E + G+L Q L + ++ +++ V
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 133
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
L+YL I HRD+K +NIL+N + K+ DFG S ++ + GT Y
Sbjct: 134 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSY 188
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ PE + ++ +SD++S G+ LVE+ G+ PI
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 85 FNVNRILGQGGQGTVYKGML-ADGRIVAVKKSKIVHEGKLEE---FINEVVILSQINHRN 140
F R+LG+GG G V + A G++ A KK + K + +NE IL ++N R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 141 VVKLLGCCLETEVPLLVYEFISNGTL-FQYLHDQNEEFPLTWEMR-LRIATEVAGSLSYL 198
VV L + LV ++ G L F H FP E R + A E+ L L
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAAEICCGLEDL 302
Query: 199 HSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
H I +RD+K NILL++ +++D G + + QT + +V GT GY+ PE
Sbjct: 303 HRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVV 357
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
++ ++T D ++ G +L E++ GQ P
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 17/230 (7%)
Query: 74 TTKELDKATDH-----FNVNRILGQGGQGTVYKGMLAD-GRIVAVK--KSKIVHEGKLEE 125
T+E KA+ F++ R++G+G V L RI A+K K ++V++ + +
Sbjct: 6 NTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDID 65
Query: 126 FIN-EVVILSQINHRNVVKLLGCCLETEVPLL-VYEFISNGTLFQYLHDQNEEFPLTWEM 183
++ E + Q ++ + L C +TE L V E+++ G L ++ Q + L E
Sbjct: 66 WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEH 122
Query: 184 RLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT 243
+ E++ +L+YLH I +RD+K N+LL+ + K+ D+G K + T
Sbjct: 123 ARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTT 178
Query: 244 TKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ GT Y+ PE R + D ++ GV++ E++ G+ P + GS +
Sbjct: 179 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 228
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVA-------VKKSKIVHEGKLEEFINEVVILS 134
+D + R+LG+G G V +L +I + K ++ + E + EV +L
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 135 QINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
Q++H N++KL + LV E + G LF + + + RI +V
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSG 144
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEK---YTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
++Y+H I HRD+K N+LL K ++ DFG S + + K+ GT
Sbjct: 145 ITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 199
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLY 311
Y+ PE G + +K DV+S GV+L LL+G P G Y IL E Y
Sbjct: 200 YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPF--------NGANEYDILKKVEKGKY 250
Query: 312 DFLDDQVLKVGQ 323
F Q KV +
Sbjct: 251 TFELPQWKKVSE 262
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 85 FNVNRILGQGGQGTVY--KGMLADGRIVA---VKKSKIVHEGKLEEFINEVVILSQINHR 139
F +LG G V+ K L G++ A +KKS + LE NE+ +L +I H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLE---NEIAVLKKIKHE 66
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
N+V L T LV + +S G LF + ++ T + + +V ++ YLH
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLH 123
Query: 200 SAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
I HRD+K N+L E + DFG SK ++Q + + GT GY+ PE
Sbjct: 124 ENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTPGYVAPE 177
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
++ D +S GV+ LL G P
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 90 ILGQGGQ-GTVYKGMLADGRIVAVKKS-KIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
I+G+ G G VYK + ++A K E +LE+++ E+ IL+ +H N+VKLL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
++ EF + G + + + E PLT + + +L+YLH I
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDNK---II 130
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF-----RSGQ 262
HRD+K+ NIL K+ADFG S GT ++ PE +
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 263 FTDKSDVYSFGVVLVELLTGQKP 285
+ K+DV+S G+ L+E+ + P
Sbjct: 191 YDYKADVWSLGITLIEMAEIEPP 213
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 12/214 (5%)
Query: 85 FNVNRILGQGGQGTVYKGMLAD-GRIVAVK--KSKIVHEGKLEEFIN-EVVILSQINHRN 140
F++ R++G+G V L RI A+K K ++V++ + +++ E + Q ++
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 141 VVKLLGCCLETEVPLL-VYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ L C +TE L V E+++ G L ++ Q + L E + E++ +L+YLH
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLH 123
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
I +RD+K N+LL+ + K+ D+G K + T+ GT Y+ PE R
Sbjct: 124 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ D ++ GV++ E++ G+ P + GS +
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL----------EEFINEVVI 132
D F LG G G V+K V+ K S +V KL + I E+ +
Sbjct: 9 DDFEKISELGAGNGGVVFK--------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L + N +V G + E + G+L Q L + ++ +++ V
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 117
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
L+YL I HRD+K +NIL+N + K+ DFG S + ID+ + + GT Y
Sbjct: 118 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDE--MANEFVGTRSY 172
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
+ PE + ++ +SD++S G+ LVE+ G+ P
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 12/214 (5%)
Query: 85 FNVNRILGQGGQGTVYKGMLAD-GRIVAVK--KSKIVHEGKLEEFIN-EVVILSQINHRN 140
F++ R++G+G V L RI A+K K ++V++ + +++ E + Q ++
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 141 VVKLLGCCLETEVPLL-VYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ L C +TE L V E+++ G L ++ Q + L E + E++ +L+YLH
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLH 127
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
I +RD+K N+LL+ + K+ D+G K + T+ GT Y+ PE R
Sbjct: 128 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ D ++ GV++ E++ G+ P + GS +
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 74 TTKELDKATDH-----FNVNRILGQGGQGTVYKGMLAD-GRIVA---VKKSKIVHEGKLE 124
T+E KA+ F++ R++G+G V L RI A VKK + + ++
Sbjct: 38 NTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDID 97
Query: 125 EFINEVVILSQINHRNVVKLLGCCLETEVPLL-VYEFISNGTLFQYLHDQNEEFPLTWEM 183
E + Q ++ + L C +TE L V E+++ G L ++ Q + L E
Sbjct: 98 WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEH 154
Query: 184 RLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT 243
+ E++ +L+YLH I +RD+K N+LL+ + K+ D+G K + T
Sbjct: 155 ARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTT 210
Query: 244 TKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ GT Y+ PE R + D ++ GV++ E++ G+ P + GS +
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 129/312 (41%), Gaps = 50/312 (16%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVA-------VKKSKIVHEGKLEEFINEVVILS 134
+D + R+LG+G G V +L +I + K ++ + E + EV +L
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 135 QINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
Q++H N+ KL + LV E + G LF + + + RI +V
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSG 138
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEK---YTAKVADFGTSKFIVIDQTHVTTKVQ---- 247
++Y H I HRD+K N+LL K ++ DFG S TH +
Sbjct: 139 ITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKXKDK 188
Query: 248 -GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSME 306
GT Y+ PE G + +K DV+S GV+L LL+G P G Y IL
Sbjct: 189 IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPF--------NGANEYDILKKV 239
Query: 307 ENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDIN 366
E Y F Q KV + + L + L R + ++ A++ E IQ K+
Sbjct: 240 EKGKYTFELPQWKKVSE-----SAKDLIRKXLTYVPSXRISARD-ALDHEWIQTYTKE-- 291
Query: 367 VKQICDEIESCD 378
QI ++ S D
Sbjct: 292 --QISVDVPSLD 301
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 83 DHFNVNRILGQGGQGTVYK-GMLADGRIVAVKKSKIVHEGKLEEFINEVV---ILSQINH 138
D F R+LG+GG G V+ M A G++ A KK K + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 139 RNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLS 196
R +V L ET+ L LV ++ G + ++++ +E+ P E R T ++ L
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LH I +RD+K N+LL++ +++D G + + QT T GT G++ PE
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPE 359
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSK 292
++ D ++ GV L E++ + P G K
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 83 DHFNVNRILGQGGQGTVYK-GMLADGRIVAVKKSKIVHEGKLEEFINEVV---ILSQINH 138
D F R+LG+GG G V+ M A G++ A KK K + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 139 RNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLS 196
R +V L ET+ L LV ++ G + ++++ +E+ P E R T ++ L
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LH I +RD+K N+LL++ +++D G + + QT T GT G++ PE
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPE 359
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSK 292
++ D ++ GV L E++ + P G K
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 83 DHFNVNRILGQGGQGTVYK-GMLADGRIVAVKKSKIVHEGKLEEFINEVV---ILSQINH 138
D F R+LG+GG G V+ M A G++ A KK K + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 139 RNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLS 196
R +V L ET+ L LV ++ G + ++++ +E+ P E R T ++ L
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LH I +RD+K N+LL++ +++D G + + QT T GT G++ PE
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPE 359
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSK 292
++ D ++ GV L E++ + P G K
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 83 DHFNVNRILGQGGQGTVYK-GMLADGRIVAVKKSKIVHEGKLEEFINEVV---ILSQINH 138
D F R+LG+GG G V+ M A G++ A KK K + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 139 RNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT-EVAGSLS 196
R +V L ET+ L LV ++ G + ++++ +E+ P E R T ++ L
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+LH I +RD+K N+LL++ +++D G + + QT T GT G++ PE
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPE 359
Query: 257 YFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSK 292
++ D ++ GV L E++ + P G K
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKS-KIVHEGKLEE-----FINEVVILSQ 135
+ +N+ +LG+G G V K RI + + K++++ + + EV +L +
Sbjct: 21 AERYNIVCMLGKGSFGEVLK---CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
++H N++KL ++ +V E + G LF + + + RI +V +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGI 134
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
+Y+H I HRD+K NILL K K+ DFG S Q GT Y
Sbjct: 135 TYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRIGTAYY 189
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ PE R G + +K DV+S GV+L LL+G P
Sbjct: 190 IAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKS-KIVHEGKLEE-----FINEVVILSQ 135
+ +N+ +LG+G G V K RI + + K++++ + + EV +L +
Sbjct: 21 AERYNIVCMLGKGSFGEVLK---CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
++H N++KL ++ +V E + G LF + + + RI +V +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGI 134
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
+Y+H I HRD+K NILL K K+ DFG S Q GT Y
Sbjct: 135 TYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRIGTAYY 189
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ PE R G + +K DV+S GV+L LL+G P
Sbjct: 190 IAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKS-KIVHEGKLEE-----FINEVVILSQ 135
+ +N+ +LG+G G V K RI + + K++++ + + EV +L +
Sbjct: 21 AERYNIVCMLGKGSFGEVLK---CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
++H N++KL ++ +V E + G LF + + + RI +V +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGI 134
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
+Y+H I HRD+K NILL K K+ DFG S Q GT Y
Sbjct: 135 TYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRIGTAYY 189
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ PE R G + +K DV+S GV+L LL+G P
Sbjct: 190 IAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 91 LGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL 144
LG G G VYK G LA +++ K E +LE++I E+ IL+ +H +VKL
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKS-----EEELEDYIVEIEILATCDHPYIVKL 73
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
LG ++ EF G + + + + LT + ++ +L++LHS
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSKR-- 129
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY-----FR 259
I HRD+K+ N+L+ + ++ADFG S + GT ++ PE +
Sbjct: 130 -IIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKP 285
+ K+D++S G+ L+E+ + P
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 30/233 (12%)
Query: 63 SDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-------IVAVKKS 115
++G+ DR KL TD FN +LG+G G V ML++ + + +KK
Sbjct: 331 NNGNRDRMKL---------TD-FNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKD 377
Query: 116 KIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQN 174
++ + +E + E +L+ + L C +T L V E+++ G L ++
Sbjct: 378 VVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG 437
Query: 175 EEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKF 234
+ A E+A L +L S I +RD+K N++L+ + K+ADFG K
Sbjct: 438 R---FKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE 491
Query: 235 IVIDQTHVTTK-VQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ D VTTK GT Y+ PE + D ++FGV+L E+L GQ P
Sbjct: 492 NIWDG--VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 91 LGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL 144
LG G G VYK G LA +++ K E +LE++I E+ IL+ +H +VKL
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKS-----EEELEDYIVEIEILATCDHPYIVKL 81
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
LG ++ EF G + + + + LT + ++ +L++LHS
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSKR-- 137
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY-----FR 259
I HRD+K+ N+L+ + ++ADFG S + GT ++ PE +
Sbjct: 138 -IIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKP 285
+ K+D++S G+ L+E+ + P
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 30/233 (12%)
Query: 63 SDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGR-------IVAVKKS 115
++G+ DR KL TD FN +LG+G G V ML++ + + +KK
Sbjct: 10 NNGNRDRMKL---------TD-FNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKD 56
Query: 116 KIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQN 174
++ + +E + E +L+ + L C +T L V E+++ G L ++
Sbjct: 57 VVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG 116
Query: 175 EEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKF 234
+ A E+A L +L S I +RD+K N++L+ + K+ADFG K
Sbjct: 117 R---FKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE 170
Query: 235 IVIDQTHVTTK-VQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ D VTTK GT Y+ PE + D ++FGV+L E+L GQ P
Sbjct: 171 NIWDG--VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 22/235 (9%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVH--EGKLEEFINEVVILSQIN 137
AT + +G G GTVYK G VA+K ++ + EG + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 138 ---HRNVVKLLGCCL------ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
H NVV+L+ C E +V LV+E + L YL D+ L E +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLM 118
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+ L +LH+ I HRD+K NIL+ T K+ADFG ++ + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALAPVVV 173
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFIL 303
T Y PE + D++S G + E+ +KP + G+ EA L F L
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP-LFCGNSEADQLGKIFDL 226
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLXGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLAGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 26/209 (12%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFIN-EVVILSQINHRNVVKLLG 146
+++G G G VY+ L D G +VA+KK V +GK F N E+ I+ +++H N+V+L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGK--AFKNRELQIMRKLDHCNIVRLRY 80
Query: 147 CCLET-----EVPL-LVYEFISNGTLFQ---YLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
+ EV L LV +++ T+++ + + P+ + ++L + ++ SL+Y
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAY 137
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE 256
+HS I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 192
Query: 257 Y-FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVH--EGKLEEFINEVVILSQIN 137
AT + +G G GTVYK G VA+K ++ + EG + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 138 ---HRNVVKLLGCCL----ETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT 189
H NVV+L+ C + E+ + LV+E + L YL D+ L E +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGT 249
+ L +LH+ I HRD+K NIL+ T K+ADFG ++ + V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALDPVVVT 174
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFIL 303
Y PE + D++S G + E+ +KP + G+ EA L F L
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP-LFCGNSEADQLGKIFDL 226
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 82 TDHFNVNRILGQGGQGTVY----KGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQIN 137
+D + + LG G G V K A+ I +KKS + ++EV +L Q++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQ--YLHDQNEEFPLTWEMRLRIATEVAGSL 195
H N++KL + LV E G LF L + E I +V
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-----VIMKQVLSGT 117
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQ---GT 249
+YLH I HRD+K N+LL K K+ DFG S V K++ GT
Sbjct: 118 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-----EVGGKMKERLGT 169
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
Y+ PE R ++ +K DV+S GV+L LL G P
Sbjct: 170 AYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 28 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 140
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++E+ +V DFG +K + T + GT YL
Sbjct: 141 FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 193
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 21/246 (8%)
Query: 53 GLVLQQQLTSSDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVA 111
GLV + + + KL KE + + V +LG GG G+VY G+ ++D VA
Sbjct: 13 GLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 72
Query: 112 VK---KSKIVHEGKLEEFIN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN 163
+K K +I G+L EVV+L +++ V++LL + +L+ E
Sbjct: 73 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 132
Query: 164 -GTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EK 221
LF ++ E L E+ +V ++ + H+ + HRDIK NIL++ +
Sbjct: 133 VQDLFDFI---TERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNR 186
Query: 222 YTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELL 280
K+ DFG+ + + V T GT Y PE+ R ++ +S V+S G++L +++
Sbjct: 187 GELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243
Query: 281 TGQKPI 286
G P
Sbjct: 244 CGDIPF 249
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 91 LGQGGQGTVYKG--MLADGRIVAVKKSKIV--HEGKLEEFINEVVILSQIN---HRNVVK 143
+G+G G V+K + GR VA+K+ ++ EG I EV +L + H NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 144 LLGCCL------ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
L C ET++ LV+E + L YL D+ E + E + ++ L +
Sbjct: 79 LFDVCTVSRTDRETKL-TLVFEHVDQD-LTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + HRD+K NIL+ K+ADFG ++ T V T Y PE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFI---LSMEENRLYDF- 313
+ D++S G + E+ +KP + GS + L L EE+ D
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR-RKP-LFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 314 LDDQVLKVGQKEEIMTIAT--------LATRCLNLNGKRR 345
L Q + I T L +CL N +R
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 85 FNVNRILGQGG-QGTVYKGMLADGRIVAVK-KSKIVHEGKLEEFINEVVILSQINHRNVV 142
F LG G V A G++ AVK K +GK NE+ +L +I H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAA 202
L LV + +S G LF + ++ T + + +V ++ YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF---YTEKDASTLIRQVLDAVYYLHR-- 138
Query: 203 SMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
M I HRD+K N+L +E+ ++DFG SK + + V + GT GY+ PE
Sbjct: 139 -MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK--MEGKGDVMSTACGTPGYVAPEVLA 195
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPI 286
++ D +S GV+ LL G P
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 36/214 (16%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFIN-EVVILSQINHRNVVKLLG 146
+++G G G VY+ L D G +VA+KK V +GK F N E+ I+ +++H N+V+L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGK--AFKNRELQIMRKLDHCNIVRLRY 80
Query: 147 CCLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYL 198
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYI 138
Query: 199 HSAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
HS I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRY 187
Query: 258 FRSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
+R+ + +T DV+S G VL ELL GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 36/214 (16%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFIN-EVVILSQINHRNVVKLLG 146
+++G G G VY+ L D G +VA+KK V +GK F N E+ I+ +++H N+V+L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGK--AFKNRELQIMRKLDHCNIVRLRY 80
Query: 147 CCLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYL 198
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYI 138
Query: 199 HSAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
HS I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRY 187
Query: 258 FRSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
+R+ + +T DV+S G VL ELL GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF L Q L D + LT I + + L L S +
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 126 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 183
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 184 AVDIWSLGCIFAEMVT 199
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 82 TDHFNVNRILGQGGQGTVY----KGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQIN 137
+D + + LG G G V K A+ I +KKS + ++EV +L Q++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQ--YLHDQNEEFPLTWEMRLRIATEVAGSL 195
H N++KL + LV E G LF L + E M+ +V
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK-----QVLSGT 134
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQ---GT 249
+YLH I HRD+K N+LL K K+ DFG S V K++ GT
Sbjct: 135 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-----EVGGKMKERLGT 186
Query: 250 FGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
Y+ PE R ++ +K DV+S GV+L LL G P
Sbjct: 187 AYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + +G G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ KVADFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 91 LGQGGQGTVYKG--MLADGRIVAVKKSKIV--HEGKLEEFINEVVILSQIN---HRNVVK 143
+G+G G V+K + GR VA+K+ ++ EG I EV +L + H NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 144 LLGCCL------ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
L C ET++ LV+E + L YL D+ E + E + ++ L +
Sbjct: 79 LFDVCTVSRTDRETKL-TLVFEHVDQD-LTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + HRD+K NIL+ K+ADFG ++ T V T Y PE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFI---LSMEENRLYDF- 313
+ D++S G + E+ +KP + GS + L L EE+ D
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR-RKP-LFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 314 LDDQVLKVGQKEEIMTIAT--------LATRCLNLNGKRR 345
L Q + I T L +CL N +R
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYKGMLADGRI------VAVKKSKIVHEGKLEEFI--NEVV 131
K +D F+ +++G+G G V +LA + V V + K + + K E+ I V
Sbjct: 36 KPSD-FHFLKVIGKGSFGKV---LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV 91
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATE 190
+L + H +V L + V ++I+ G LF +L Q E L E R R A E
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFL--EPRARFYAAE 147
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTF 250
+A +L YLHS + I +RD+K NILL+ + + DFG K I+ T+ GT
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTP 203
Query: 251 GYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
YL PE + D + G VL E+L G P + E
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ LS+ HS +
Sbjct: 71 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR---VL 125
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 174
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLA 227
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 102/235 (43%), Gaps = 22/235 (9%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVH--EGKLEEFINEVVILSQIN 137
AT + +G G GTVYK G VA+K ++ + EG + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 138 ---HRNVVKLLGCCL------ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
H NVV+L+ C E +V LV+E + L YL D+ L E +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLM 118
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
+ L +LH+ I HRD+K NIL+ T K+ADFG ++ V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-- 173
Query: 249 TFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFIL 303
T Y PE + D++S G + E+ +KP + G+ EA L F L
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP-LFCGNSEADQLGKIFDL 226
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX----EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD- 72
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+S L D + LT I + + L L S +
Sbjct: 73 VIHTENKLYLVFEFLSMD-----LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 185
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD- 72
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+S + D + + + ++ L++ HS +
Sbjct: 73 VIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 127
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 128 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 185
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD- 70
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+S + D + + + ++ L++ HS +
Sbjct: 71 VIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 125
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 183
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 184 TAVDIWSLGCIFAEMVT 200
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 27/240 (11%)
Query: 91 LGQGGQGTVYKGM--LADGRIVAVKKSKIVHE-GKLEEFINEVVILSQINHRNVVKLLGC 147
LG+G TVYKG L D +VA+K+ ++ HE G I EV +L + H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
+ LV+E++ + L QYL D + ++L + + G L+Y H +
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH-NVKLFLFQLLRG-LAYCHRQK---VL 122
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE-YFRSGQFTDK 266
HRD+K N+L+NE+ K+ADFG ++ I +V T Y P+ S ++ +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQ 181
Query: 267 SDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYF-------------ILSMEENRLYDF 313
D++ G + E+ TG+ + GS L F ILS EE + Y++
Sbjct: 182 IDMWGVGCIFYEMATGRP--LFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY 239
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD- 71
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+S L D + LT I + + L L S +
Sbjct: 72 VIHTENKLYLVFEFLSMD-----LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 184
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 185 TAVDIWSLGCIFAEMVT 201
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + +G G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ KVADFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 19/283 (6%)
Query: 15 LLCENYEGGYRCITPKRKVYIIKREDIKLKEKFFKRNGGLVLQQQLTSSDGS---IDRCK 71
++ EN G + P V I E + + G +V + SS+ D K
Sbjct: 82 IIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWK 141
Query: 72 LFTTKEL----DKATDHFNVNRILGQGGQGTVYK-GMLADGRIVAVKKSKIVHEGKLEEF 126
+ + + D DH++++ LG G G V++ A G A K HE E
Sbjct: 142 QYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV 201
Query: 127 INEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLR 186
E+ +S + H +V L + +++YEF+S G LF+ + D++ + ++ + +
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVE 259
Query: 187 IATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQT-HVT 243
+V L ++H + H D+K NI+ K + K+ DFG + + Q+ VT
Sbjct: 260 YMRQVCKGLCHMHENNYV---HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT 316
Query: 244 TKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
T GT + PE +D++S GV+ LL+G P
Sbjct: 317 T---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 91 LGQGGQGTVYKG--MLADGRIVAVKKSKIV--HEGKLEEFINEVVILSQIN---HRNVVK 143
+G+G G V+K + GR VA+K+ ++ EG I EV +L + H NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 144 LLGCCL------ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
L C ET++ LV+E + L YL D+ E + E + ++ L +
Sbjct: 79 LFDVCTVSRTDRETKL-TLVFEHVDQ-DLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + HRD+K NIL+ K+ADFG ++ T V T Y PE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFI---LSMEENRLYDF- 313
+ D++S G + E+ +KP + GS + L L EE+ D
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR-RKP-LFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 314 LDDQVLKVGQKEEIMTIAT--------LATRCLNLNGKRR 345
L Q + I T L +CL N +R
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX----EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFA---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 128
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 182
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 79 DKATDHFNVNRILGQGGQGTVY----KGMLADGRIVAVKKS---KIVHEGKLEEFINEVV 131
D +D F V LG+G VY KG + +KK+ KIV E+
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR--------TEIG 100
Query: 132 ILSQINHRNVVKLLGCCLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
+L +++H N++KL ET + LV E ++ G LF + ++ + +
Sbjct: 101 VLLRLSHPNIIKLKEI-FETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQ 156
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTTKVQ 247
+ +++YLH I HRD+K N+L K+ADFG SK +++ + V
Sbjct: 157 ILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK--IVEHQVLMKTVC 211
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GY PE R + + D++S G++ LL G +P
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + +G G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ KVADFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 40/299 (13%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGMLADG---RIVAVKKSKIVHEGKLEEFINEVVI 132
+E D + + ++G+G G VY G R++ +++ +E +L+ F EV+
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERD---NEDQLKAFKREVMA 82
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
Q H NVV +G C+ ++ TL+ + D + L +IA E+
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIV 140
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFG---TSKFIVIDQTHVTTKVQ-G 248
+ YLH+ I H+D+KS N+ + + DFG S + + ++Q G
Sbjct: 141 KGMGYLHAKG---ILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNG 196
Query: 249 TFGYLDPEYFRSGQ---------FTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAA 299
+L PE R F+ SDV++ G + EL + P ++ A +
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF---KTQPAEAIIW 253
Query: 300 YFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERI 358
M+ N + ++G +EI I C + RPT ++ LE++
Sbjct: 254 QMGTGMKPN---------LSQIGMGKEISDILLF---CWAFEQEERPTFTKLMDMLEKL 300
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 36 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L E R A ++ +
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FXEPHARFYAAQIVLT 148
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 149 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 201
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 234
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 34/213 (15%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 115
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 173
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y+
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYY 222
Query: 259 RSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
R+ + +T DV+S G VL ELL GQ
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 93
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 151
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY- 257
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 206
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX----EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 70
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 127
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 128 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 181
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 128
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 182
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 100
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 158
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY- 257
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 213
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQP 240
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 70
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 127
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 128 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 181
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 140
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 194
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 34/213 (15%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 117
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 175
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y+
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYY 224
Query: 259 RSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
R+ + +T DV+S G VL ELL GQ
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 257
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 89
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 147
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY- 257
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 202
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQP 229
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 115
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 173
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY- 257
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 228
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 128
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 182
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 140
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 194
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 141
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 195
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 82
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 140
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY- 257
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 195
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQP 222
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 141
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 195
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L E R A ++ +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX----EPHARFYAAQIVLT 174
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 227
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 34/213 (15%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 109
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 167
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y+
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYY 216
Query: 259 RSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
R+ + +T DV+S G VL ELL GQ
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 249
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 141
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 195
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFI-NEVVILSQ 135
D+++ LG G V K G+ + + +++K G E I EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPA 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 93
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 151
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY- 257
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 206
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 71 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 125
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTA 184
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 76 KELDKATDHFNVNRILGQGGQGTV----YKGMLADGRIVAVKKSKIVHEGKLEEFINEVV 131
++L + + V +++G+G G V +K + + K +++ F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
I++ N VV+L + +V E++ G L + N + P W R A EV
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWA-RFYTA-EV 182
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
+L +HS M HRD+K N+LL++ K+ADFGT + + GT
Sbjct: 183 VLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 252 YLDPEYFRS----GQFTDKSDVYSFGVVLVELLTGQKPI 286
Y+ PE +S G + + D +S GV L E+L G P
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 81
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 139
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY- 257
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 194
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 141
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 195
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 140
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 194
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLE-- 124
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 98
Query: 125 -EFINEVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 155
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 209
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 34/213 (15%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 94
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 152
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y+
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYY 201
Query: 259 RSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
R+ + +T DV+S G VL ELL GQ
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 234
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 44 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 103
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 104 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 160
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 161 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 214
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 215 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 140
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 194
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 76 KELDKATDHFNVNRILGQGGQGTV----YKGMLADGRIVAVKKSKIVHEGKLEEFINEVV 131
++L + + V +++G+G G V +K + + K +++ F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
I++ N VV+L + +V E++ G L + N + P W R A EV
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWA-RFYTA-EV 182
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
+L +HS M HRD+K N+LL++ K+ADFGT + + GT
Sbjct: 183 VLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 252 YLDPEYFRS----GQFTDKSDVYSFGVVLVELLTGQKPI 286
Y+ PE +S G + + D +S GV L E+L G P
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 34/213 (15%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 86
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 144
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y+
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYY 193
Query: 259 RSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
R+ + +T DV+S G VL ELL GQ
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 81
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 139
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY- 257
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 194
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 76 KELDKATDHFNVNRILGQGGQGTV----YKGMLADGRIVAVKKSKIVHEGKLEEFINEVV 131
++L + + V +++G+G G V +K + + K +++ F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
I++ N VV+L + +V E++ G L + N + P W R A EV
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKW-ARFYTA-EV 177
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
+L +HS M HRD+K N+LL++ K+ADFGT + + GT
Sbjct: 178 VLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234
Query: 252 YLDPEYFRS----GQFTDKSDVYSFGVVLVELLTGQKPI 286
Y+ PE +S G + + D +S GV L E+L G P
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 34/213 (15%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 119
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 177
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y+
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYY 226
Query: 259 RSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
R+ + +T DV+S G VL ELL GQ
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 259
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 78 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 132
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 133 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTA 191
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 192 VDIWSLGCIFAEMVT 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 71 KLFTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEF 126
KL KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 98
Query: 127 IN---EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLT 180
EVV+L +++ V++LL + +L+ E LF ++ E L
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 155
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQ 239
E+ +V ++ + H+ + HRDIK NIL++ + K+ DFG+ + +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---K 209
Query: 240 THVTTKVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 85
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY- 257
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y PE
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 198
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQK 284
F + +T DV+S G VL ELL GQ
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQP 225
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 70 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 123
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYST 182
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 183 AVDIWSLGCIFAEMVT 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 71 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 125
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 70 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 124
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 78 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 132
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 133 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 191
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 192 VDIWSLGCIFAEMVT 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 72 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 125
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYST 184
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 185 AVDIWSLGCIFAEMVT 200
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 34/213 (15%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 81
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 139
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y+
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYY 188
Query: 259 RSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
R+ + +T DV+S G VL ELL GQ
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVV--------ILSQ 135
++ ++G+G V + + A G AVK ++ E E + EV IL Q
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 136 I-NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
+ H +++ L+ + LV++ + G LF YL E+ L+ + I + +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRSIMRSLLEA 212
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
+S+LH+ I HRD+K NILL++ +++DFG S ++ ++ GT GYL
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPGEKLRELCGTPGYLA 267
Query: 255 PEYFRSGQ------FTDKSDVYSFGVVLVELLTGQKPI 286
PE + + + D+++ GV+L LL G P
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 71 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 125
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 91 LGQGGQGTVYKGMLADGR-IVAVKKSKIVH--EGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G GTV+K + IVA+K+ ++ EG + E+ +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
+ LV+EF + L +Y N + L E+ ++ L + HS +
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRN---VL 123
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE-YFRSGQFTDK 266
HRD+K N+L+N K+ADFG ++ I + +V T Y P+ F + ++
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 267 SDVYSFGVVLVELLTGQKPII 287
D++S G + EL +P+
Sbjct: 183 IDMWSAGCIFAELANAARPLF 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 75 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 129
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 130 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 188
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 189 VDIWSLGCIFAEMVT 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 34/213 (15%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 160
Query: 148 CLET-----EVPL-LVYEFISNGT--LFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+ EV L LV +++ + ++ + P+ + ++L + ++ SL+Y+H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYM-YQLFRSLAYIH 218
Query: 200 SAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
S I HRDIK N+LL+ K+ DFG++K +V + +V+ Y+ Y+
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSRYY 267
Query: 259 RSGQ-------FTDKSDVYSFGVVLVELLTGQK 284
R+ + +T DV+S G VL ELL GQ
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 300
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 71 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 125
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 183
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 184 AVDIWSLGCIFAEMVT 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 70 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 124
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 182
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 183 AVDIWSLGCIFAEMVT 198
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 127/308 (41%), Gaps = 62/308 (20%)
Query: 90 ILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL---- 145
I +G G V+K L + VAVK + + + + E+ + H N+++ +
Sbjct: 22 IKARGRFGCVWKAQLMND-FVAVKIFPL-QDKQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 146 -GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
G LE E+ L+ F G+L YL +TW +A ++ LSYLH
Sbjct: 80 RGSNLEVEL-WLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 205 --------PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ-GTFGYLDP 255
I HRD KS N+LL TA +ADFG + + T Q GT Y+ P
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 256 EY------FRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENR 309
E F+ F + D+Y+ G+VL EL ++ K A G ++L EE
Sbjct: 195 EVLEGAINFQRDAFL-RIDMYAMGLVLWEL--------VSRCKAADGPVDEYMLPFEE-- 243
Query: 310 LYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ 369
++GQ + + + ++ K RPT+K+ + K + Q
Sbjct: 244 ----------EIGQHPSLEELQEVV-----VHKKMRPTIKDHWL---------KHPGLAQ 279
Query: 370 ICDEIESC 377
+C IE C
Sbjct: 280 LCVTIEEC 287
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 71 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 124
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 182
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 71 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 124
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 182
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 74 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 127
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 185
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 73 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 126
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 184
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 185 TAVDIWSLGCIFAEMVT 201
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F R LG G G V ML G A+K K K+V ++E +NE I
Sbjct: 42 DQFERIRTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ KVADFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 71 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 125
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 183
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 184 AVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 70 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 123
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 181
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 182 TAVDIWSLGCIFAEMVT 198
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 79 DKATDHFNVNRILGQGGQGTVYK-GMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQIN 137
D DH++++ LG G G V++ A G A K HE E E+ +S +
Sbjct: 47 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 106
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
H +V L + +++YEF+S G LF+ + D++ + ++ + + +V L +
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCH 164
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQT-HVTTKVQGTFGYLD 254
+H + H D+K NI+ K + K+ DFG + + Q+ VTT GT +
Sbjct: 165 MHENNYV---HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAA 218
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
PE +D++S GV+ LL+G P
Sbjct: 219 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 72 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 125
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 183
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 184 TAVDIWSLGCIFAEMVT 200
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 75 TKELDKATDHFNVNRILGQGGQGTVYKG-MLADGRIVAVK-KSKIVHEGKLEEFINEVVI 132
K+ D+ ++ ++ +G GG V + G +VA+K K L E+
Sbjct: 2 PKDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEA 61
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L + H+++ +L +V E+ G LF Y+ Q+ L+ E + ++
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR---LSEEETRVVFRQIV 118
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
+++Y+HS HRD+K N+L +E + K+ DFG ++ + G+ Y
Sbjct: 119 SAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAY 175
Query: 253 LDPEYFRSGQFT-DKSDVYSFGVVLVELLTGQKPI 286
PE + + ++DV+S G++L L+ G P
Sbjct: 176 AAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 74 IHTENKLYLVFEFLHQD--LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 128
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 186
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 187 AVDIWSLGCIFAEMVT 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 73 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 126
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 184
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 185 TAVDIWSLGCIFAEMVT 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 75 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 128
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 186
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 187 TAVDIWSLGCIFAEMVT 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 72 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 126
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 184
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 185 AVDIWSLGCIFAEMVT 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+EF+ + D + + + ++ L++ HS +
Sbjct: 74 -IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 127
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYS 185
Query: 266 KS-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 103/238 (43%), Gaps = 25/238 (10%)
Query: 81 ATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEF-----INEVVILS 134
AT + +G G GTVYK G VA+K ++ + G + EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 135 QIN---HRNVVKLLGCCL------ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRL 185
++ H NVV+L+ C E +V LV+E + L YL D+ L E
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKV-TLVFEHVDQ-DLRTYL-DKAPPPGLPAETIK 123
Query: 186 RIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTK 245
+ + L +LH+ I HRD+K NIL+ T K+ADFG ++ + T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALTP 178
Query: 246 VQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFIL 303
V T Y PE + D++S G + E+ +KP + G+ EA L F L
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP-LFCGNSEADQLGKIFDL 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 42/279 (15%)
Query: 84 HFNVNRILGQGGQGTVYKG-MLADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHR 139
H+ + LG G G V G G VAVK + KI + + E+ L H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAGSLSY 197
+++KL +V E++S G LF Y+ H + EE E R R+ ++ ++ Y
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM----EAR-RLFQQILSAVDY 126
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
H + HRD+K N+LL+ AK+ADFG S ++ D + T G+ Y PE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSN-MMSDGEFLRTSC-GSPNYAAPEV 181
Query: 258 FRSGQFTDKS-DVYSFGVVLVELLTGQKPI----ILTGSKEATGLAAYFILSMEENRLYD 312
+ D++S GV+L LL G P + T K+ G F + NR
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG--GVFYIPEYLNR--- 236
Query: 313 FLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
++ATL L ++ +R T+K++
Sbjct: 237 ----------------SVATLLMHMLQVDPLKRATIKDI 259
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 72 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 126
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 127 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 184
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 185 AVDIWSLGCIFAEMVT 200
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 127/307 (41%), Gaps = 61/307 (19%)
Query: 90 ILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLE-EFINEVVILSQINHRNVVKLLGC- 147
+ +G G V+K L + VAVK I + + E+ EV L + H N+++ +G
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAE 87
Query: 148 --CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH----- 199
+V L L+ F G+L +L ++W IA +A L+YLH
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 200 --SAASMPIYHRDIKSTNILLNEKYTAKVADFGTS-KFIVIDQTHVTTKVQGTFGYLDPE 256
I HRDIKS N+LL TA +ADFG + KF T GT Y+ PE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 257 Y------FRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRL 310
F+ F + D+Y+ G+VL EL + A G ++L EE
Sbjct: 204 VLEGAINFQRDAFL-RIDMYAMGLVLWEL--------ASRCTAADGPVDEYMLPFEE--- 251
Query: 311 YDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQI 370
++GQ + + + ++ K+RP +++ QK + +
Sbjct: 252 ---------EIGQHPSLEDMQEVV-----VHKKKRPVLRDY---------WQKHAGMAML 288
Query: 371 CDEIESC 377
C+ IE C
Sbjct: 289 CETIEEC 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 73 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 127
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 128 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 185
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 186 AVDIWSLGCIFAEMVT 201
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ ++ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPFF 239
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 36/214 (16%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL--- 144
+++G G G VY+ L D G +VA+KK ++ + + + E+ I+ +++H N+V+L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRYF 81
Query: 145 ------------LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L L+ VP VY + ++ + P+ + ++L + ++
Sbjct: 82 FYSSGEKKDVVYLNLVLDY-VPETVYR------VARHYSRAKQTLPVIY-VKLYMY-QLF 132
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFG 251
SL+Y+HS I HRDIK N+LL+ K+ DFG++K +V + +V+
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 252 YLDPEY-FRSGQFTDKSDVYSFGVVLVELLTGQK 284
Y PE F + +T DV+S G VL ELL GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 21/223 (9%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFIN--- 128
KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 129 EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRL 185
EVV+L +++ V++LL + +L+ E + LF ++ E L E+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI---TERGALQEELAR 117
Query: 186 RIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTT 244
+V ++ + H+ + HRDIK NIL++ + K+ DFG+ + + V T
Sbjct: 118 SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 171
Query: 245 KVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVILSQ 135
D+++ LG G V K G+ + + +++K G E+ EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 90 ILGQGGQGTVYKGMLAD-GRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
ILGQG V++G G + A+K + I ++ + E +L ++NH+N+VKL
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 148 CLETEV--PLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
ET +L+ EF G+L+ L + + + L L + +V G +++L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 206 IYHRDIKSTNILL----NEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSG 261
I HR+IK NI+ + + K+ DFG ++ + D+ V + GT YL P+ +
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMYERA 190
Query: 262 --------QFTDKSDVYSFGVVLVELLTGQKPI 286
++ D++S GV TG P
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 39/227 (17%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVI--LSQINHRN 140
D+ + ++G+G G VYKG L D R VAVK + + FINE I + + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVK---VFSFANRQNFINEKNIYRVPLMEHDN 68
Query: 141 VVKLLGCCLETEVP-----LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
+ + + LLV E+ NG+L +YL + W R+A V L
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGL 124
Query: 196 SYLHSAASMP--------IYHRDIKSTNILLNEKYTAKVADFGTSKFIV-------IDQT 240
+YLH+ +P I HRD+ S N+L+ T ++DFG S + ++
Sbjct: 125 AYLHT--ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 241 HVTTKVQGTFGYLDPEYFRSG-------QFTDKSDVYSFGVVLVELL 280
+ GT Y+ PE + D+Y+ G++ E+
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 90 ILGQGGQGTVYKGMLAD-GRIVAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
ILGQG V++G G + A+K + I ++ + E +L ++NH+N+VKL
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 148 CLETEV--PLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
ET +L+ EF G+L+ L + + + L L + +V G +++L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 206 IYHRDIKSTNILL----NEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSG 261
I HR+IK NI+ + + K+ DFG ++ + D+ V+ + GT YL P+ +
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYERA 190
Query: 262 --------QFTDKSDVYSFGVVLVELLTGQKPI 286
++ D++S GV TG P
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 122/286 (42%), Gaps = 40/286 (13%)
Query: 88 NRILGQGGQGTVYKGMLAD----GRI----VAVKKSKIVHEGKLEEFINEVVILSQINHR 139
N LGQG ++KG+ + G++ V +K H E F ++S+++H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
++V G C+ + +LV EF+ G+L YL + W +L +A ++A ++ +L
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLE 130
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKV------QGTFGYL 253
+ H ++ + NILL + K G FI + ++ V Q ++
Sbjct: 131 ENT---LIHGNVCAKNILLIREEDRKT---GNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 254 DPEYFRSGQFTD-KSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYD 312
PE + + + +D +SFG L E+ +G G K + L + L E+R
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG-------GDKPLSALDSQRKLQFYEDR--- 234
Query: 313 FLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERI 358
L + E +A L C++ RP+ + + +L +
Sbjct: 235 ----HQLPAPKAAE---LANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FXEPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L E R A ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FXEPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFI-NEVVILSQ 135
D+++ LG G V K G+ + + +++K G E I EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L E R A ++ +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX----EPHARFYAAQIVLT 146
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 199
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 31/220 (14%)
Query: 82 TDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQ 135
TD + + LG+G V + G +I+ KK KLE E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQ------YLHDQNEEFPLTWEMRLRIAT 189
+ H N+V+L E LV++ ++ G LF+ Y + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---------HCIQ 110
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEK---YTAKVADFGTSKFIVIDQTHVTTKV 246
++ S+++ H I HRD+K N+LL K K+ADFG + + DQ
Sbjct: 111 QILESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGF 166
Query: 247 QGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GYL PE R + D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FXEPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVILSQ 135
D+++ LG G V K G+ + + +++K G E+ EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVILSQ 135
D+++ LG G V K G+ + + +++K G E+ EV IL +
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVILSQ 135
D+++ LG G V K G+ + + +++K G E+ EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 31/220 (14%)
Query: 82 TDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQ 135
TD + + LG+G V + G +I+ KK KLE E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQ------YLHDQNEEFPLTWEMRLRIAT 189
+ H N+V+L E LV++ ++ G LF+ Y + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---------HCIQ 110
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEK---YTAKVADFGTSKFIVIDQTHVTTKV 246
++ S+++ H I HRD+K N+LL K K+ADFG + + DQ
Sbjct: 111 QILESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGF 166
Query: 247 QGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GYL PE R + D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFI-NEVVILSQ 135
D+++ LG G V K G+ + + +++K G E I EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFI-NEVVILSQ 135
D+++ LG G V K G+ + + +++K G E I EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 90 ILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFIN-----EVVILSQINHRNVVK 143
LG+G TVYK + +IVA+KK K+ H + ++ IN E+ +L +++H N++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAAS 203
LL LV++F+ T + + N ++ + + G L YLH
Sbjct: 77 LLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQG-LEYLHQHW- 132
Query: 204 MPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPE-YFRSG 261
I HRD+K N+LL+E K+ADFG +K F ++ + V T Y PE F +
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGAR 188
Query: 262 QFTDKSDVYSFGVVLVELL 280
+ D+++ G +L ELL
Sbjct: 189 MYGVGVDMWAVGCILAELL 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 146
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 199
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 39/248 (15%)
Query: 54 LVLQQQLTSSDGSIDRCKLFTTKELDKATDHFNVNRILGQGGQGTVYKGMLADGRIVAVK 113
L Q L ++ G +F T + ++ + + LG G G V +L ++ V+
Sbjct: 14 LYFQGDLQATPG------MFITSKKGHLSEMYQRVKKLGSGAYGEV---LLCRDKVTHVE 64
Query: 114 KS-KIVHEGKLE-----EFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLF 167
++ KI+ + + + + EV +L ++H N++KL + LV E G LF
Sbjct: 65 RAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124
Query: 168 QYLHDQNEEFPLTWEMRLR------IATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEK 221
+ M+ I +V ++YLH I HRD+K N+LL K
Sbjct: 125 D---------EIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESK 172
Query: 222 YT---AKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVE 278
K+ DFG S V + + GT Y+ PE R ++ +K DV+S GV+L
Sbjct: 173 EKDALIKIVDFGLS--AVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFI 229
Query: 279 LLTGQKPI 286
LL G P
Sbjct: 230 LLAGYPPF 237
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFI-NEVVILSQ 135
D+++ LG G V K G+ + + +++K G E I EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVILSQ 135
D+++ LG G V K G+ + + +++K G E+ EV IL +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 126
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 127 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 181
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFI-NEVVILSQ 135
D+++ LG G V K G+ + + +++K G E I EV IL +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 126
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 127 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 181
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVILSQ 135
D+++ LG G V K G+ + + +++K G E+ EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 18/227 (7%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQIN 137
D F R LG G G V+ L + R +++ +K + +E+ E+ +L ++
Sbjct: 22 DLFIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-HDQNEEFPLTWEMRLRIATEVAGSLS 196
H N++K+ + +V E G L + + Q L+ + ++ +L+
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 197 YLHSAASMPIYHRDIKSTNILLNE---KYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
Y HS + H+D+K NIL + K+ DFG ++ D+ +T GT Y+
Sbjct: 139 YFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYM 193
Query: 254 DPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAY 300
PE F+ T K D++S GVV+ LLTG P T +E A Y
Sbjct: 194 APEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 62 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 174
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 227
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 52/236 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK--SKIVHEGKLEEFINEVVILSQIN-HRNVVKLLG 146
LG+G G V+K + G +VAVKK + + E++IL++++ H N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 147 CCL---ETEVPLLVYEFIS-------NGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLS 196
+ +V LV++++ + + +H Q + ++ +
Sbjct: 77 VLRADNDRDV-YLVFDYMETDLHAVIRANILEPVHKQ------------YVVYQLIKVIK 123
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSK-FIVI------------------ 237
YLHS + HRD+K +NILLN + KVADFG S+ F+ I
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 238 -DQTHVTTKVQGTFGYLDPE-YFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGS 291
D + T T Y PE S ++T D++S G +L E+L G KPI S
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPIFPGSS 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 27 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 83
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E++ G +F +L + F E R A ++ +
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 139
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 140 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLA 192
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 225
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 82 TDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQ 135
TD + + +G+G V + G +I+ KK KLE E I
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQ------YLHDQNEEFPLTWEMRLRIAT 189
+ H N+V+L E LV++ ++ G LF+ Y + + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ--------- 110
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEK---YTAKVADFGTSKFIVIDQTHVTTKV 246
++ ++ + H M + HRD+K N+LL K K+ADFG + + DQ
Sbjct: 111 QILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGF 166
Query: 247 QGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GYL PE R + D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFIN---EVVILSQI- 136
+ + +LG+GG GTV+ G L D VA+K +++++ L + + EV +L ++
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 137 ---NHRNVVKLLGCCLETEVPLLVYE-FISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
H V++LL E +LV E + LF Y+ E+ PL +V
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI---TEKGPLGEGPSRCFFGQVV 149
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
++ + HS + HRDIK NIL++ + AK+ DFG+ + T GT
Sbjct: 150 AAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRV 203
Query: 252 YLDPEYFRSGQFTD-KSDVYSFGVVLVELLTGQKPI 286
Y PE+ Q+ + V+S G++L +++ G P
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF 239
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLE---EFIN 128
KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 129 EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRL 185
EVV+L +++ V++LL + +L+ E LF ++ E L E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 118
Query: 186 RIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTT 244
+V ++ + H+ + HRDIK NIL++ + K+ DFG+ + + V T
Sbjct: 119 SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 172
Query: 245 KVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+ G +F +L E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FXEPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ KV DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 42/279 (15%)
Query: 84 HFNVNRILGQGGQGTVYKG-MLADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHR 139
H+ + LG G G V G G VAVK + KI + + E+ L H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYL--HDQNEEFPLTWEMRLRIATEVAGSLSY 197
+++KL +V E++S G LF Y+ H + EE E R R+ ++ ++ Y
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM----EAR-RLFQQILSAVDY 126
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
H + HRD+K N+LL+ AK+ADFG S ++ G+ Y PE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSN--MMSDGEFLRDSCGSPNYAAPEV 181
Query: 258 FRSGQFTDKS-DVYSFGVVLVELLTGQKPI----ILTGSKEATGLAAYFILSMEENRLYD 312
+ D++S GV+L LL G P + T K+ G F + NR
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG--GVFYIPEYLNR--- 236
Query: 313 FLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
++ATL L ++ +R T+K++
Sbjct: 237 ----------------SVATLLMHMLQVDPLKRATIKDI 259
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
P S + D ++ GV++ E+ G P
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 121/286 (42%), Gaps = 40/286 (13%)
Query: 88 NRILGQGGQGTVYKGMLAD----GRI----VAVKKSKIVHEGKLEEFINEVVILSQINHR 139
N LGQG ++KG+ + G++ V +K H E F ++S+++H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
++V G C + +LV EF+ G+L YL + W +L +A ++A ++ +L
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLE 130
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKV------QGTFGYL 253
+ H ++ + NILL + K G FI + ++ V Q ++
Sbjct: 131 ENT---LIHGNVCAKNILLIREEDRKT---GNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 254 DPEYFRSGQFTD-KSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYD 312
PE + + + +D +SFG L E+ +G G K + L + L E+R
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG-------GDKPLSALDSQRKLQFYEDR--- 234
Query: 313 FLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERI 358
L + E +A L C++ RP+ + + +L +
Sbjct: 235 ----HQLPAPKAAE---LANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ KV DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 91 LGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEE----FINEVVILSQINHRNVVKLL 145
+G G G V+K G ++AVK+ + G EE ++ V+L + +V+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMR--RSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G + + E + GT + L + + P+ + ++ + +L YL
Sbjct: 91 GTFITNTDVFIAMELM--GTCAEKLK-KRMQGPIPERILGKMTVAIVKALYYLKEKHG-- 145
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
+ HRD+K +NILL+E+ K+ DFG S +V D+ + G Y+ PE T
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--AKDRSAGCAAYMAPERIDPPDPTK 203
Query: 266 -----KSDVYSFGVVLVELLTGQKP 285
++DV+S G+ LVEL TGQ P
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFP 228
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ KV DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVILSQ 135
D+++ LG G V K G+ + + +++K G E+ EV IL +
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLE---EFIN 128
KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 129 EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRL 185
EVV+L +++ V++LL + +L+ E LF ++ E L E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 118
Query: 186 RIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTT 244
+V ++ + H+ + HRDIK NIL++ + K+ DFG+ + + V T
Sbjct: 119 SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 172
Query: 245 KVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ KV DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLE---EFIN 128
KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 129 EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRL 185
EVV+L +++ V++LL + +L+ E LF ++ E L E+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 117
Query: 186 RIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTT 244
+V ++ + H+ + HRDIK NIL++ + K+ DFG+ + + V T
Sbjct: 118 SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 171
Query: 245 KVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 85 FNVNRILGQGGQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQIN 137
F+ ++LG+G G V +L A GR A+K K I+ + ++ + E +L
Sbjct: 10 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
H + L + V E+ + G LF +L + E T E E+ +L Y
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEY 123
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + +RDIK N++L++ K+ DFG K + D + T GT YL PE
Sbjct: 124 LHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEV 179
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ D + GVV+ E++ G+ P
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 85 FNVNRILGQGGQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQIN 137
F+ ++LG+G G V +L A GR A+K K I+ + ++ + E +L
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
H + L + V E+ + G LF +L + E T E E+ +L Y
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEY 120
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + +RDIK N++L++ K+ DFG K + D + T GT YL PE
Sbjct: 121 LHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEV 176
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ D + GVV+ E++ G+ P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+ K ++ EG I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 71 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 125
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+ K ++ EG I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+EF+ + D + + + ++ L++ HS +
Sbjct: 70 IHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 124
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++ +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 268 -DVYSFGVVLVELLT 281
D++S G + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 83 DHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFI-NEVVILSQ 135
D+++ LG G V K G+ + + +++K G E I EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSL 195
I H NV+ L +L+ E ++ G LF +L ++ LT E ++ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---LTEEEATEFLKQILNGV 127
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAK----VADFGTSKFIVIDQTHVTTKVQGTFG 251
YLHS + I H D+K NI+L ++ K + DFG + ID + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPE 182
Query: 252 YLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ PE ++D++S GV+ LL+G P +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFIN--- 128
KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 129 EVVILSQINH--RNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRL 185
EVV+L +++ V++LL + +L+ E LF ++ E L E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 118
Query: 186 RIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTT 244
+V ++ + H+ + HRDIK NIL++ + K+ DFG+ + + V T
Sbjct: 119 SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 172
Query: 245 KVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 76 KELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFIN--- 128
KE + + V +LG GG G+VY G+ ++D VA+K K +I G+L
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 129 EVVILSQIN--HRNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRL 185
EVV+L +++ V++LL + +L+ E LF ++ E L E+
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 140
Query: 186 RIATEVAGSLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTT 244
+V ++ + H+ + HRDIK NIL++ + K+ DFG+ + + V T
Sbjct: 141 SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 194
Query: 245 KVQGTFGYLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 89 RILGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL--- 144
+ LG GG G V+ + D + VA+KK + ++ + E+ I+ +++H N+VK+
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 145 -----------LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAG 193
+G E +V E++ L + E+ PL E ++
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETD-----LANVLEQGPLLEEHARLFMYQLLR 131
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTTKVQG--TF 250
L Y+HSA + HRD+K N+ +N E K+ DFG ++ + +H +G T
Sbjct: 132 GLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 251 GYLDPEYFRS-GQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
Y P S +T D+++ G + E+LTG+ + G+ E
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT--LFAGAHE 230
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 85 FNVNRILGQGGQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQIN 137
F+ ++LG+G G V +L A GR A+K K I+ + ++ + E +L
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
H + L + V E+ + G LF +L + E T E E+ +L Y
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEY 120
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + +RDIK N++L++ K+ DFG K + D + T GT YL PE
Sbjct: 121 LHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEV 176
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ D + GVV+ E++ G+ P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 91 LGQGGQGTVYKGMLADGR-IVAVKKSKIVH--EGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G GTV+K + IVA+K+ ++ EG + E+ +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
+ LV+EF + L +Y N + L E+ ++ L + HS +
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRN---VL 123
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE-YFRSGQFTDK 266
HRD+K N+L+N K+A+FG ++ I + +V T Y P+ F + ++
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 267 SDVYSFGVVLVELLTGQKPII 287
D++S G + EL +P+
Sbjct: 183 IDMWSAGCIFAELANAGRPLF 203
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 148 CLETEVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPI 206
+ TE L LV+E + + D + + + ++ L++ HS +
Sbjct: 70 -IHTENKLYLVFEHVHQD--LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 123
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ + T +V T Y PE ++
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYST 182
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 183 AVDIWSLGCIFAEMVT 198
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 90 ILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG+GG ++ AD + V V KS ++ + E+ E+ I + H++VV
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G + + +V E +L + LH + + E R + V G YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLRQIVLGC-QYLHRNR--- 137
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
+ HRD+K N+ LNE K+ DFG + + D T + GT Y+ PE +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 266 KSDVYSFGVVLVELLTGQKPI 286
+ DV+S G ++ LL G+ P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPF 217
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 90 ILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG+GG ++ AD + V V KS ++ + E+ E+ I + H++VV
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G + + +V E +L + LH + + E R + V G YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLRQIVLGC-QYLHRNR--- 137
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
+ HRD+K N+ LNE K+ DFG + + D T + GT Y+ PE +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 266 KSDVYSFGVVLVELLTGQKPI 286
+ DV+S G ++ LL G+ P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 90 ILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG+GG ++ AD + V V KS ++ + E+ E+ I + H++VV
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G + + +V E +L + LH + + E R + V G YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLRQIVLGC-QYLHRNR--- 141
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
+ HRD+K N+ LNE K+ DFG + + D T + GT Y+ PE +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 200
Query: 266 KSDVYSFGVVLVELLTGQKPI 286
+ DV+S G ++ LL G+ P
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPF 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 11/202 (5%)
Query: 89 RILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL 144
R LG+GG Y+ D + V V KS ++ + E+ E+ I +++ +VV
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
G + + +V E +L + LH + + E R + + G + YLH+
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAV-TEPEARYFMRQTIQG-VQYLHNNR-- 162
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFT 264
+ HRD+K N+ LN+ K+ DFG + I D T + GT Y+ PE +
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHS 220
Query: 265 DKSDVYSFGVVLVELLTGQKPI 286
+ D++S G +L LL G+ P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPF 242
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA----DGRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F+ + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+++ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N+L++++ +V DFG +K + T + GT L
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEALA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHE--GKLEEFINEVVILSQINHRNVVKLLGCC 148
+G+G G VYK G A+KK ++ E G I E+ IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ +LV+E + + L D E L ++ ++Y H + H
Sbjct: 70 HTKKRLVLVFEHLDQD--LKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRR---VLH 123
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR-SGQFTDKS 267
RD+K N+L+N + K+ADFG ++ I T +V T Y P+ S +++
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTI 182
Query: 268 DVYSFGVVLVELLTGQKPIILTGSKEATGLAAYF 301
D++S G + E++ G + G EA L F
Sbjct: 183 DIWSVGCIFAEMVNGAP--LFPGVSEADQLMRIF 214
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKI--VHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G G VYK G +VA+KK ++ EG I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+E + + D + + + ++ L++ HS +
Sbjct: 74 IHTENKLYLVFEHVDQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VL 128
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSK-FIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
HRD+K N+L+N + K+ADFG ++ F V +T+ V T Y PE ++
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 186
Query: 267 S-DVYSFGVVLVELLT 281
+ D++S G + E++T
Sbjct: 187 AVDIWSLGCIFAEMVT 202
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 38/321 (11%)
Query: 49 KRNGGL-----VLQQQLTSSDGSID----RCKLFTTKELDKATDHFNVNRILGQGGQGTV 99
KRN GL +Q TSS D C + + D LG+G G V
Sbjct: 8 KRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVV 67
Query: 100 YK-GMLADGRIVAVKKSK-IVHEGKLEEFINEVVI-LSQINHRNVVKLLGCCLETEVPLL 156
K + G+I+AVK+ + V+ + + + ++ I + ++ V G +
Sbjct: 68 EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127
Query: 157 VYEFISNG--TLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
E + ++ + D+ + P ++ +IA + +L +LHS S + HRD+K +
Sbjct: 128 CMELMDTSLDKFYKQVIDKGQTIPE--DILGKIAVSIVKALEHLHSKLS--VIHRDVKPS 183
Query: 215 NILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY----FRSGQFTDKSDVY 270
N+L+N K+ DFG S ++V + T G Y+ PE ++ KSD++
Sbjct: 184 NVLINALGQVKMCDFGISGYLV--DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIW 241
Query: 271 SFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTI 330
S G+ ++EL IL ++ G +L +++ ++ +
Sbjct: 242 SLGITMIEL------AILRFPYDSWGTPF--------QQLKQVVEEPSPQLPADKFSAEF 287
Query: 331 ATLATRCLNLNGKRRPTMKEV 351
++CL N K RPT E+
Sbjct: 288 VDFTSQCLKKNSKERPTYPEL 308
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHE--GKLEEFINEVVILSQINHRNVVKLLGCC 148
+G+G G VYK G A+KK ++ E G I E+ IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ +LV+E + + L D E L ++ ++Y H + H
Sbjct: 70 HTKKRLVLVFEHLDQD--LKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRR---VLH 123
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR-SGQFTDKS 267
RD+K N+L+N + K+ADFG ++ I T +V T Y P+ S +++
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTI 182
Query: 268 DVYSFGVVLVELLTGQKPIILTGSKEATGLAAYF 301
D++S G + E++ G + G EA L F
Sbjct: 183 DIWSVGCIFAEMVNGTP--LFPGVSEADQLMRIF 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 117 IVHEGKLEEFINEVVILSQINHRNVVKLLGCCLET--EVPLLVYEFISNGTLFQYLHDQN 174
I G +E+ E+ IL +++H NVVKL+ + + +V+E ++ G + + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK- 132
Query: 175 EEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKF 234
PL+ + ++ + YLH I HRDIK +N+L+ E K+ADFG S
Sbjct: 133 ---PLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 235 IVIDQTHVTTKVQGTFGYLDPEYFRSGQ--FTDKS-DVYSFGVVLVELLTGQKPII 287
++ V GT ++ PE + F+ K+ DV++ GV L + GQ P +
Sbjct: 187 FKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N +VKL + +V E+ G +F +L + F E R A ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ +V DFG +K + T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTPEYLA 206
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 83 DHFNVNRILGQG-----------GQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVV 131
DH+ + LG G G G Y R ++ + + E E EV
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE----EIEREVN 60
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
IL +I H N++ L +L+ E +S G LF +L ++ LT + + ++
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQI 117
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA----KVADFGTSKFIVIDQTHVTTKVQ 247
+ YLHS I H D+K NI+L +K K+ DFG + I+ + +
Sbjct: 118 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIF 172
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
GT ++ PE ++D++S GV+ LL+G P +
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 212
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N + KL + +V E+ G +F +L E R A ++ +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FXEPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ KV DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 16/232 (6%)
Query: 76 KELDKATDHFNVNRILGQGGQGTV-YKGMLADGRIVAVK---KSKIVHEGKLEEFINEVV 131
KE+ D F + +++G+G V M G++ A+K K ++ G++ F E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
+L + R + +L + LV E+ G L L E P EM E+
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPA--EMARFYLAEI 171
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG 251
++ +H + HRDIK NILL+ ++ADFG+ + D T + GT
Sbjct: 172 VMAIDSVHRLGYV---HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPD 228
Query: 252 YLDPEYFRS-------GQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATG 296
YL PE ++ G + + D ++ GV E+ GQ P + E G
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 90 ILGQGGQGTVYK-GMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
ILG G G V+K A G +A K K EE NE+ +++Q++H N+++L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+LV E++ G LF + D E + LT + ++ + ++H M I H
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIID--ESYNLTELDTILFMKQICEGIRHMH---QMYILH 210
Query: 209 RDIKSTNILL--NEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFG---YLDPEYFRSGQF 263
D+K NIL + K+ DFG ++ + K++ FG +L PE
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLAR-----RYKPREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 264 TDKSDVYSFGVVLVELLTGQKPII 287
+ +D++S GV+ LL+G P +
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFL 289
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N + KL + +V E+ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ KV DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 83 DHFNVNRILGQG-----------GQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVV 131
DH+ + LG G G G Y R ++ + + E E EV
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE----EIEREVN 67
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
IL +I H N++ L +L+ E +S G LF +L ++ LT + + ++
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQI 124
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA----KVADFGTSKFIVIDQTHVTTKVQ 247
+ YLHS I H D+K NI+L +K K+ DFG + I+ + +
Sbjct: 125 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIF 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
GT ++ PE ++D++S GV+ LL+G P +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLAD----GRIVAVK---KSKIVHEGKLEEFINEVVILSQ 135
D F + LG G G V ML G A+K K K+V ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGS 194
+N + KL + +V E+ G +F +L + F E R A ++ +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
YLHS + + +RD+K N++++++ KV DFG +K + T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 255 PEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHE--GKLEEFINEVVILSQINHRNVVKLLGCC 148
+G+G G VYK G A+KK ++ E G I E+ IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 149 LETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYH 208
+ +LV+E + + L D E L ++ ++Y H + H
Sbjct: 70 HTKKRLVLVFEHLDQD--LKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRR---VLH 123
Query: 209 RDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR-SGQFTDKS 267
RD+K N+L+N + K+ADFG ++ I T ++ T Y P+ S +++
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTI 182
Query: 268 DVYSFGVVLVELLTGQKPIILTGSKEATGLAAYF 301
D++S G + E++ G + G EA L F
Sbjct: 183 DIWSVGCIFAEMVNGTP--LFPGVSEADQLMRIF 214
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 23/222 (10%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHE--GKLEEFINEVVILSQINHRNVVKLLGC 147
LG+G G VYK + VA+K+ ++ HE G I EV +L ++ HRN+++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRL--RIATEVAGSLSYLHSAASMP 205
L++E+ N L +Y+ D+N + MR+ ++ +++ HS +
Sbjct: 102 IHHNHRLHLIFEYAEND-LKKYM-DKNPDV----SMRVIKSFLYQLINGVNFCHSRRCL- 154
Query: 206 IYHRDIKSTNILL-----NEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE-YFR 259
HRD+K N+LL +E K+ DFG ++ I T ++ T Y PE
Sbjct: 155 --HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEILLG 211
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYF 301
S ++ D++S + E+L K + G E L F
Sbjct: 212 SRHYSTSVDIWSIACIWAEML--MKTPLFPGDSEIDQLFKIF 251
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 85 FNVNRILGQGGQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQIN 137
F+ ++LG+G G V +L A GR A+K K I+ + ++ + E +L
Sbjct: 12 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
H + L + V E+ + G LF +L + E T E E+ +L Y
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEY 125
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + +RDIK N++L++ K+ DFG K + D GT YL PE
Sbjct: 126 LHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEV 181
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ D + GVV+ E++ G+ P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVI 132
K D +++ LG G V K G+ + + ++S+ G EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L Q+ H NV+ L +L+ E +S G LF +L + L+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQIL 125
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTA----KVADFGTSKFIVIDQTHVTTK-VQ 247
++YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
GT ++ PE ++D++S GV+ LL+G P +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPIF 228
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLE---EFINEVVILSQIN 137
+ V +LG GG G+VY G+ ++D VA+K K +I G+L EVV+L +++
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 138 --HRNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
V++LL + +L+ E LF ++ E L E+ +V +
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA 125
Query: 195 LSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+ + H+ + HRDIK NIL++ + K+ DFG+ + + V T GT Y
Sbjct: 126 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYS 179
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
PE+ R ++ +S V+S G++L +++ G P
Sbjct: 180 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLE---EFINEVVILSQIN 137
+ V +LG GG G+VY G+ ++D VA+K K +I G+L EVV+L +++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 138 --HRNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
V++LL + +L+ E LF ++ E L E+ +V +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA 122
Query: 195 LSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+ + H+ + HRDIK NIL++ + K+ DFG+ + + V T GT Y
Sbjct: 123 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYS 176
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
PE+ R ++ +S V+S G++L +++ G P
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 85 FNVNRILGQGGQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQIN 137
F+ ++LG+G G V +L A GR A+K K I+ + ++ + E +L
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
H + L + V E+ + G LF +L + E T E E+ +L Y
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEY 120
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + +RDIK N++L++ K+ DFG K + D GT YL PE
Sbjct: 121 LHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEV 176
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ D + GVV+ E++ G+ P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVI 132
K D +++ LG G V K G+ + + ++S+ G EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L Q+ H NV+ L +L+ E +S G LF +L + L+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQIL 125
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTA----KVADFGTSKFIVIDQTHVTTK-VQ 247
++YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
GT ++ PE ++D++S GV+ LL+G P +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLEEFIN---EVVILSQIN 137
+ V +LG GG G+VY G+ ++D VA+K K +I G+L EVV+L +++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 138 --HRNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
V++LL + +L+ E LF ++ E L E+ +V +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA 122
Query: 195 LSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+ + H+ + HRDIK NIL++ + K+ DFG+ + + V T GT Y
Sbjct: 123 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYS 176
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
PE+ R ++ +S V+S G++L +++ G P
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 89 RILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL 144
R LG+GG Y+ D + V V KS ++ + E+ E+ I +++ +VV
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
G + + +V E +L + LH + + E R + + G + YLH+
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAV-TEPEARYFMRQTIQG-VQYLHNNR-- 146
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFT 264
+ HRD+K N+ LN+ K+ DFG + I D + GT Y+ PE +
Sbjct: 147 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKKGHS 204
Query: 265 DKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ D++S G +L LL G+ P + KE
Sbjct: 205 FEVDIWSLGCILYTLLVGKPPFETSCLKE 233
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVI 132
K D +++ LG G V K G+ + + ++S+ G EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L Q+ H NV+ L +L+ E +S G LF +L + L+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQIL 125
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTA----KVADFGTSKFIVIDQTHVTTK-VQ 247
++YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
GT ++ PE ++D++S GV+ LL+G P +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 85 FNVNRILGQGGQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQIN 137
F+ ++LG+G G V +L A GR A+K K I+ + ++ + E +L
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
H + L + V E+ + G LF +L + E T E E+ +L Y
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEY 120
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + +RDIK N++L++ K+ DFG K + D GT YL PE
Sbjct: 121 LHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEV 176
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ D + GVV+ E++ G+ P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 85 FNVNRILGQGGQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQIN 137
F+ ++LG+G G V +L A GR A+K K I+ + ++ + E +L
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
H + L + V E+ + G LF +L + E T E E+ +L Y
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEY 120
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
LHS + +RDIK N++L++ K+ DFG K + D GT YL PE
Sbjct: 121 LHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEV 176
Query: 258 FRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+ D + GVV+ E++ G+ P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVI 132
K D +++ LG G V K G+ + + ++S+ G EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L Q+ H NV+ L +L+ E +S G LF +L + L+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQIL 125
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTA----KVADFGTSKFIVIDQTHVTTK-VQ 247
++YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
GT ++ PE ++D++S GV+ LL+G P +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVK---KSKIVHEGKLE---EFINEVVILSQIN 137
+ V +LG GG G+VY G+ ++D VA+K K +I G+L EVV+L +++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 138 --HRNVVKLLGCCLETEVPLLVYEFISN-GTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
V++LL + +L+ E LF ++ E L E+ +V +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA 122
Query: 195 LSYLHSAASMPIYHRDIKSTNILLN-EKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL 253
+ + H+ + HRDIK NIL++ + K+ DFG+ + + V T GT Y
Sbjct: 123 VRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYS 176
Query: 254 DPEYFRSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
PE+ R ++ +S V+S G++L +++ G P
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPIF 232
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPIF 232
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEG-KLEEFINEVVI 132
K D +++ LG G V K G+ + + ++S+ G EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L Q+ H NV+ L +L+ E +S G LF +L + L+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQIL 125
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTA----KVADFGTSKFIVIDQTHVTTK-VQ 247
++YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
GT ++ PE ++D++S GV+ LL+G P +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 83 DHFNVNRILGQG-----------GQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVV 131
DH+ + LG G G G Y R + + + E E EV
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSRE----EIEREVN 81
Query: 132 ILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
IL +I H N++ L +L+ E +S G LF +L ++ LT + + ++
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQI 138
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA----KVADFGTSKFIVIDQTHVTTKVQ 247
+ YLHS I H D+K NI+L +K K+ DFG + I+ + +
Sbjct: 139 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIF 193
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
GT ++ PE ++D++S GV+ LL+G P +
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 233
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 31/220 (14%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLAD------GRIVAVKKSKIVHEGKLEEFINEVVILSQ 135
TD + + LG+G V + + +I+ KK KLE E I
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE---REARICRL 86
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQ------YLHDQNEEFPLTWEMRLRIAT 189
+ H N+V+L E LV++ ++ G LF+ Y + +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---------HCIH 137
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEK---YTAKVADFGTSKFIVIDQTHVTTKV 246
++ S++++H I HRD+K N+LL K K+ADFG + V +
Sbjct: 138 QILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGF 193
Query: 247 QGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GYL PE R + D+++ GV+L LL G P
Sbjct: 194 AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 165 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 224 GYTKSIDIWSVGCILAEMLSN-RPIF 248
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPIF 228
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPIF 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 84 HFNVNRILGQGGQGTVYKGMLA-DGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHR 139
H+ + LG G G V G G VAVK + KI + + E+ L H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+++KL +V E++S G LF Y+ L + R+ ++ + Y H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCH 133
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
+ HRD+K N+LL+ AK+ADFG S ++ G+ Y PE
Sbjct: 134 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSN--MMSDGEFLRXSCGSPNYAAPEVI- 187
Query: 260 SGQFT--DKSDVYSFGVVLVELLTGQKPI 286
SG+ + D++S GV+L LL G P
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 206 GYTKSIDIWSVGCILAEMLSN-RPIF 230
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 95 GQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
G+GT K +L A GR A+K K IV + ++ + E +L H + L
Sbjct: 160 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 219
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGSLSYLHSAASMPI 206
+ V E+ + G LF +L + + E R R E+ +L YLHS + +
Sbjct: 220 FQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEKN--V 273
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
+RD+K N++L++ K+ DFG K + D + T GT YL PE +
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRA 332
Query: 267 SDVYSFGVVLVELLTGQKPI 286
D + GVV+ E++ G+ P
Sbjct: 333 VDWWGLGVVMYEMMCGRLPF 352
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 89 RILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL 144
R LG+GG Y+ D + V V KS ++ + E+ E+ I +++ +VV
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
G + + +V E +L + LH + + E R + + G + YLH+
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAV-TEPEARYFMRQTIQG-VQYLHNNR-- 162
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFT 264
+ HRD+K N+ LN+ K+ DFG + I D + GT Y+ PE +
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKKGHS 220
Query: 265 DKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ D++S G +L LL G+ P + KE
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 95 GQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
G+GT K +L A GR A+K K IV + ++ + E +L H + L
Sbjct: 157 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 216
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGSLSYLHSAASMPI 206
+ V E+ + G LF +L + + E R R E+ +L YLHS + +
Sbjct: 217 FQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEKN--V 270
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
+RD+K N++L++ K+ DFG K + D + T GT YL PE +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRA 329
Query: 267 SDVYSFGVVLVELLTGQKPI 286
D + GVV+ E++ G+ P
Sbjct: 330 VDWWGLGVVMYEMMCGRLPF 349
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGM--LADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVK----L 144
+G+G G V + R+ K S H+ + + E+ IL + H NV+ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
LE + + + + L++ L Q L+ + ++ L Y+HSA
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQ----LSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+L+N K+ DFG ++ + H T+ T Y PE S
Sbjct: 165 -VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSK 223
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 224 GYTKSIDIWSVGCILAEMLSN-RPIF 248
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
Query: 89 RILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL 144
R LG+GG Y+ D + V V KS ++ + E+ E+ I +++ +VV
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
G + + +V E +L + LH + + E R + + G + YLH+
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAV-TEPEARYFMRQTIQG-VQYLHNNR-- 162
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFT 264
+ HRD+K N+ LN+ K+ DFG + I D + GT Y+ PE +
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYIAPEVLCKKGHS 220
Query: 265 DKSDVYSFGVVLVELLTGQKPI 286
+ D++S G +L LL G+ P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPF 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGM--LADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V L R+ K S H+ + + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPIF 232
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 90 ILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG+GG ++ AD + V V KS ++ + E+ E+ I + H++VV
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G + + +V E +L + LH + + E R + V G YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLRQIVLGC-QYLHRNR--- 161
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
+ HRD+K N+ LNE K+ DFG + + D + GT Y+ PE +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 220
Query: 266 KSDVYSFGVVLVELLTGQKPI 286
+ DV+S G ++ LL G+ P
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPF 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 90 ILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG+GG ++ AD + V V KS ++ + E+ E+ I + H++VV
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G + + +V E +L + LH + + E R + V G YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLRQIVLGC-QYLHRNR--- 135
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
+ HRD+K N+ LNE K+ DFG + + D + GT Y+ PE +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 194
Query: 266 KSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ DV+S G ++ LL G+ P + KE
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETSCLKE 222
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 152
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 153 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 212 GYTKSIDIWSVGCILAEMLSN-RPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPIF 228
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 90 ILGQGGQGTVYKGMLADGRIV----AVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
LG+GG ++ AD + V V KS ++ + E+ E+ I + H++VV
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
G + + +V E +L + LH + + E R + V G YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLRQIVLGC-QYLHRNR--- 159
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTD 265
+ HRD+K N+ LNE K+ DFG + + D + GT Y+ PE +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 218
Query: 266 KSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ DV+S G ++ LL G+ P + KE
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETSCLKE 246
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 202 GYTKSIDIWSVGCILAEMLSN-RPIF 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 209 GYTKSIDIWSVGCILAEMLSN-RPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 150
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 151 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 210 GYTKSIDIWSVGCILAEMLSN-RPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 141
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 142 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 201 GYTKSIDIWSVGCILAEMLSN-RPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPIF 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 202 GYTKSIDIWSVGCILAEMLSN-RPIF 226
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPIF 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 165 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 224 GYTKSIDIWSVGCILAEMLSN-RPIF 248
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 32/241 (13%)
Query: 73 FTTKELDKATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVV 131
F + ++ V R+L +GG VY+ + GR A+K+ E K I EV
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC 77
Query: 132 ILSQIN-HRNVVKLLGCCLET---------EVPLLVYEFISNGTLFQYLHDQNEEFPLTW 181
+ +++ H N+V+ C + + L+ + G L ++L PL+
Sbjct: 78 FMKKLSGHPNIVQF--CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC 135
Query: 182 EMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI------ 235
+ L+I + ++ ++H PI HRD+K N+LL+ + T K+ DFG++ I
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDY 194
Query: 236 -------VIDQTHVTTKVQGTFGYLDPE---YFRSGQFTDKSDVYSFGVVLVELLTGQKP 285
+ + +T T Y PE + + +K D+++ G +L L Q P
Sbjct: 195 SWSAQRRALVEEEITRNT--TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
Query: 286 I 286
Sbjct: 253 F 253
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 80 KATDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGK-LEEFINEVVI 132
K D +++ LG G V K G+ + + ++S+ G EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 133 LSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVA 192
L Q+ H N++ L +L+ E +S G LF +L + L+ E ++
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQIL 125
Query: 193 GSLSYLHSAASMPIYHRDIKSTNILLNEKYTA----KVADFGTSKFIVIDQTHVTTK-VQ 247
++YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 248 GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
GT ++ PE ++D++S GV+ LL+G P +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 147 -VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 206 GYTKSIDIWSVGCILAEMLSN-RPIF 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 32/223 (14%)
Query: 85 FNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVH-EGKLEEFINEVVILSQINHRNVV 142
F + LG+GG G V++ D A+K+ ++ + E E+ + EV L+++ H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQ--NEEFPLTW-------EMR-----LRIA 188
+ LE + S+ ++ Y+ Q +E W E R L I
Sbjct: 67 RYFNAWLEKNTTEKLQP--SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVT----- 243
++A ++ +LHS M HRD+K +NI KV DFG + D+ T
Sbjct: 125 LQIAEAVEFLHSKGLM---HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 244 ------TKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELL 280
T GT Y+ PE ++ K D++S G++L ELL
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 89 RILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCC 148
+++G G G V++ L + VA+KK ++ + + + E+ I+ + H NVV L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKK--VLQDKRFKN--RELQIMRIVKHPNVVDLKAFF 101
Query: 149 LET-----EVPL-LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAA 202
EV L LV E++ H + + + ++ SL+Y+HS
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 203 SMPIYHRDIKSTNILLNEKY-TAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY-FRS 260
I HRDIK N+LL+ K+ DFG++K ++ + +V+ Y PE F +
Sbjct: 162 ---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--YRAPELIFGA 216
Query: 261 GQFTDKSDVYSFGVVLVELLTGQK 284
+T D++S G V+ EL+ GQ
Sbjct: 217 TNYTTNIDIWSTGCVMAELMQGQP 240
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPIF 232
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H T+ T Y PE S
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 206 GYTKSIDIWSVGCILAEMLSN-RPIF 230
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSK-IVHEGKLEEFINEV-VILSQINHRNVVKLLGC 147
+G+G G+V K + G+I+AVK+ + V E + ++ + ++ V++ + +V+ G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 148 CLETEVPLLVYEFISNG--TLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
+ E +S ++Y++ ++ + E+ +I +L++L ++
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDV-IPEEILGKITLATVKALNHLKE--NLK 146
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYL-----DPEYFRS 260
I HRDIK +NILL+ K+ DFG S +V + T+ G Y+ DP R
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 261 GQFTDKSDVYSFGVVLVELLTGQKP 285
G + +SDV+S G+ L EL TG+ P
Sbjct: 205 G-YDVRSDVWSLGITLYELATGRFP 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 91 LGQGGQGTVYKGMLAD-GRIVAVKKSKIVHEGKLEEFI--NEVVILSQINHRNVVKLLGC 147
+G+G G V+K D G+IVA+KK + + + I E+ +L Q+ H N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
LV+E+ + L + Q + + I + ++++ H +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHNCI--- 124
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSG-QFTDK 266
HRD+K NIL+ + K+ DFG ++ + + +V T Y PE Q+
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQYGPP 183
Query: 267 SDVYSFGVVLVELLTG 282
DV++ G V ELL+G
Sbjct: 184 VDVWAIGCVFAELLSG 199
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 124 EEFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWE 182
E + EV IL +++ H N+++L LV++ + G LF YL E+ L+ +
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK 111
Query: 183 MRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV 242
+I + + LH + I HRD+K NILL++ K+ DFG S +D
Sbjct: 112 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEK 166
Query: 243 TTKVQGTFGYLDPEYFRSGQ------FTDKSDVYSFGVVLVELLTGQKPI 286
+V GT YL PE + + D++S GV++ LL G P
Sbjct: 167 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 124 EEFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWE 182
E + EV IL +++ H N+++L LV++ + G LF YL E+ L+ +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK 124
Query: 183 MRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV 242
+I + + LH + I HRD+K NILL++ K+ DFG S +D
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEK 179
Query: 243 TTKVQGTFGYLDPEYFRSGQ------FTDKSDVYSFGVVLVELLTGQKPI 286
+V GT YL PE + + D++S GV++ LL G P
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 95 GQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
G+GT K +L A GR A+K K IV + ++ + E +L H + L
Sbjct: 19 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 78
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGSLSYLHSAASMPI 206
+ V E+ + G LF +L + + E R R E+ +L YLHS + +
Sbjct: 79 FQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEKN--V 132
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
+RD+K N++L++ K+ DFG K + D GT YL PE +
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRA 191
Query: 267 SDVYSFGVVLVELLTGQKPI 286
D + GVV+ E++ G+ P
Sbjct: 192 VDWWGLGVVMYEMMCGRLPF 211
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 95 GQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
G+GT K +L A GR A+K K IV + ++ + E +L H + L
Sbjct: 18 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 77
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGSLSYLHSAASMPI 206
+ V E+ + G LF +L + + E R R E+ +L YLHS + +
Sbjct: 78 FQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEKN--V 131
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
+RD+K N++L++ K+ DFG K + D GT YL PE +
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 267 SDVYSFGVVLVELLTGQKPI 286
D + GVV+ E++ G+ P
Sbjct: 191 VDWWGLGVVMYEMMCGRLPF 210
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 138 HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNE--EFPLTWEMRLRIATEVAGSL 195
H N+VKL + LV E ++ G LF+ + + E ++ MR ++ ++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR-----KLVSAV 119
Query: 196 SYLHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGY 252
S++H + HRD+K N+L N+ K+ DFG ++ D + T T Y
Sbjct: 120 SHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHY 175
Query: 253 LDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
PE + + D++S GV+L +L+GQ P
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 124 EEFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWE 182
E + EV IL +++ H N+++L LV++ + G LF YL E+ L+ +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK 124
Query: 183 MRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV 242
+I + + LH + I HRD+K NILL++ K+ DFG S +D
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEK 179
Query: 243 TTKVQGTFGYLDPEYFRSGQ------FTDKSDVYSFGVVLVELLTGQKPI 286
V GT YL PE + + D++S GV++ LL G P
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 95 GQGTVYKGML----ADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
G+GT K +L A GR A+K K IV + ++ + E +L H + L
Sbjct: 17 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 76
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI-ATEVAGSLSYLHSAASMPI 206
+ V E+ + G LF +L + + E R R E+ +L YLHS + +
Sbjct: 77 FQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEKN--V 130
Query: 207 YHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK 266
+RD+K N++L++ K+ DFG K + D GT YL PE +
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 267 SDVYSFGVVLVELLTGQKPI 286
D + GVV+ E++ G+ P
Sbjct: 190 VDWWGLGVVMYEMMCGRLPF 209
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEF----INEVVILSQINHRNVVKLL 145
+GQG G V+K G+ VA+KK ++ E + E F + E+ IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 146 GCCLETEVPL--------LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
C P LV++F + L L + +F L+ E++ R+ + L Y
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYY 140
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYLD 254
+H I HRD+K+ N+L+ K+ADFG ++ + + + T Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 255 PEYFRSGQ-FTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
PE + + D++ G ++ E+ T + I+ G+ E LA
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQHQLA 240
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEF----INEVVILSQINHRNVVKLL 145
+GQG G V+K G+ VA+KK ++ E + E F + E+ IL + H NVV L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHENVVNLI 82
Query: 146 GCCLETEVPL--------LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
C P LV++F + L L + +F L+ E++ R+ + L Y
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYY 139
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYLD 254
+H I HRD+K+ N+L+ K+ADFG ++ + + + T Y
Sbjct: 140 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 255 PEYFRSGQ-FTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
PE + + D++ G ++ E+ T + I+ G+ E LA
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQHQLA 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEF----INEVVILSQINHRNVVKLL 145
+GQG G V+K G+ VA+KK ++ E + E F + E+ IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 146 GCCLETEVPL--------LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
C P LV++F + L L + +F L+ E++ R+ + L Y
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYY 140
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYLD 254
+H I HRD+K+ N+L+ K+ADFG ++ + + + T Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 255 PEYFRSGQ-FTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
PE + + D++ G ++ E+ T + I+ G+ E LA
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQHQLA 240
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEF----INEVVILSQINHRNVVKLL 145
+GQG G V+K G+ VA+KK ++ E + E F + E+ IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 146 GCCLETEVPL--------LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSY 197
C P LV++F + L L + +F L+ E++ R+ + L Y
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYY 140
Query: 198 LHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYLD 254
+H I HRD+K+ N+L+ K+ADFG ++ + + + T Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 255 PEYFRSGQ-FTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLA 298
PE + + D++ G ++ E+ T + I+ G+ E LA
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT--RSPIMQGNTEQHQLA 240
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 121/271 (44%), Gaps = 31/271 (11%)
Query: 91 LGQGGQGTVYK-GMLADGRIVAVKKSK-IVHEGKLEEFINEVVI-LSQINHRNVVKLLGC 147
LG+G G V K + G+I+AVK+ + V+ + + + ++ I + ++ V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 148 CLETEVPLLVYEFI--SNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
+ E + S ++ + D+ + P ++ +IA + +L +LHS S
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE--DILGKIAVSIVKALEHLHSKLS-- 130
Query: 206 IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQ-GTFGYLDPEY----FRS 260
+ HRD+K +N+L+N K+ DFG S ++V D V + G Y+ PE
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERINPELNQ 187
Query: 261 GQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVLK 320
++ KSD++S G+ ++EL IL ++ G +L +++ +
Sbjct: 188 KGYSVKSDIWSLGITMIEL------AILRFPYDSWGTPF--------QQLKQVVEEPSPQ 233
Query: 321 VGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ + ++CL N K RPT E+
Sbjct: 234 LPADKFSAEFVDFTSQCLKKNSKERPTYPEL 264
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIA 188
E+ L + H +++KL ++V E+ + G LF Y+ ++ +T + R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKR---MTEDEGRRFF 114
Query: 189 TEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG 248
++ ++ Y H I HRD+K N+LL++ K+ADFG S I+ D + T G
Sbjct: 115 QQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSN-IMTDGNFLKTSC-G 169
Query: 249 TFGYLDPEYFRSGQFT-DKSDVYSFGVVLVELLTGQKP 285
+ Y PE + + DV+S G+VL +L G+ P
Sbjct: 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H + T Y PE S
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 91 LGQGGQGTVYKGMLADGRI-VAVKK-SKIVHEGKLEEFINEVVILSQINHRNVVKL---- 144
+G+G G V ++ VA+KK S H+ + + E+ IL + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 145 LGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASM 204
+E + + + + L++ L Q+ L+ + ++ L Y+HSA
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 205 PIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV--TTKVQGTFGYLDPE-YFRSG 261
+ HRD+K +N+LLN K+ DFG ++ D H + T Y PE S
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 262 QFTDKSDVYSFGVVLVELLTGQKPII 287
+T D++S G +L E+L+ +PI
Sbjct: 209 GYTKSIDIWSVGCILAEMLSN-RPIF 233
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 16/241 (6%)
Query: 67 IDRCKLFTTK--ELDKATDHFNVNRILGQGGQGTVYKGMLADG-RIVAVK---KSKIVHE 120
++ K FT+K ++ + F + +++G+G G V L + ++ A+K K +++
Sbjct: 56 LEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKR 115
Query: 121 GKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLT 180
+ F E +L + + + L + LV ++ G L L + P
Sbjct: 116 AETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE- 174
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQT 240
EM E+ ++ +H + HRDIK NIL++ ++ADFG+ ++ D T
Sbjct: 175 -EMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230
Query: 241 HVTTKVQGTFGYLDPEYFRS-----GQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
++ GT Y+ PE ++ G++ + D +S GV + E+L G+ P E
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 290
Query: 296 G 296
G
Sbjct: 291 G 291
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 84 HFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEGKLEEFI-NEVVILSQINHR 139
++ + + LG+G G V G+ VA+K K++ + ++ I E+ L + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+++KL + ++V E+ N LF Y+ +++ ++ + R ++ ++ Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK---MSEQEARRFFQQIISAVEYCH 130
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
I HRD+K N+LL+E K+ADFG S I+ D + T G+ Y PE
Sbjct: 131 RHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVIS 185
Query: 260 SGQFT-DKSDVYSFGVVLVELLTGQKP 285
+ + DV+S GV+L +L + P
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 84 HFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEGKLEEFI-NEVVILSQINHR 139
++ + + LG+G G V G+ VA+K K++ + ++ I E+ L + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+++KL + ++V E+ N LF Y+ +++ ++ + R ++ ++ Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK---MSEQEARRFFQQIISAVEYCH 129
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
I HRD+K N+LL+E K+ADFG S I+ D + T G+ Y PE
Sbjct: 130 RHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVIS 184
Query: 260 SGQFT-DKSDVYSFGVVLVELLTGQKP 285
+ + DV+S GV+L +L + P
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 84 HFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEGKLEEFI-NEVVILSQINHR 139
++ + + LG+G G V G+ VA+K K++ + ++ I E+ L + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+++KL + ++V E+ N LF Y+ +++ ++ + R ++ ++ Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK---MSEQEARRFFQQIISAVEYCH 120
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
I HRD+K N+LL+E K+ADFG S I+ D + T G+ Y PE
Sbjct: 121 RHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVIS 175
Query: 260 SGQFT-DKSDVYSFGVVLVELLTGQKP 285
+ + DV+S GV+L +L + P
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 84 HFNVNRILGQGGQGTVYKGM-LADGRIVAVK--KSKIVHEGKLEEFI-NEVVILSQINHR 139
++ + + LG+G G V G+ VA+K K++ + ++ I E+ L + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
+++KL + ++V E+ N LF Y+ +++ ++ + R ++ ++ Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK---MSEQEARRFFQQIISAVEYCH 124
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
I HRD+K N+LL+E K+ADFG S I+ D + T G+ Y PE
Sbjct: 125 RHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVIS 179
Query: 260 SGQFT-DKSDVYSFGVVLVELLTGQKP 285
+ + DV+S GV+L +L + P
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG------RIVAVKKSKIVHEGKLEEFIN---EVVIL 133
D + +++ LG G G V RI++ +K I + + +N E+ IL
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT---- 189
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 195 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---------RLKEATCKLY 244
Query: 190 --EVAGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTT 244
++ ++ YLH I HRD+K N+LL+ E K+ DFG SK ++ +T +
Sbjct: 245 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMR 299
Query: 245 KVQGTFGYLDPEYFRS---GQFTDKSDVYSFGVVLVELLTGQKPI 286
+ GT YL PE S + D +S GV+L L+G P
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG------RIVAVKKSKIVHEGKLEEFIN---EVVIL 133
D + +++ LG G G V RI++ +K I + + +N E+ IL
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT---- 189
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 209 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---------RLKEATCKLY 258
Query: 190 --EVAGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTT 244
++ ++ YLH I HRD+K N+LL+ E K+ DFG SK ++ +T +
Sbjct: 259 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMR 313
Query: 245 KVQGTFGYLDPEYFRS---GQFTDKSDVYSFGVVLVELLTGQKPI 286
+ GT YL PE S + D +S GV+L L+G P
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA-DGRIVAVKKSK----IVHEGKLEEFINEVVILSQIN 137
D + + +G G G V G+ VA+KK +V K + E+ IL
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK--RTLRELKILKHFK 112
Query: 138 HRNVVKLLGCCLETEVP------LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
H N++ + L VP + V + L Q +H PLT E ++
Sbjct: 113 HDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ---PLTLEHVRYFLYQL 168
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI---VIDQTHVTTKVQG 248
L Y+HSA + HRD+K +N+L+NE K+ DFG ++ + + + T+
Sbjct: 169 LRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 249 TFGYLDPEYFRS-GQFTDKSDVYSFGVVLVELLT 281
T Y PE S ++T D++S G + E+L
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEG-KLEEFI-NEVVILSQINHR 139
+D + + + +G G G ++ D + + K + G K++E + E++ + H
Sbjct: 18 SDRYELVKDIGAGNFGVAR--LMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHP 75
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQ---NEEFPLTWEMRLRIATEVAGSLS 196
N+V+ L +V E+ S G LF+ + + +E+ E R ++G +S
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARFFFQQLISG-VS 129
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQTHVTTK-VQGTFGYL 253
Y H +M + HRD+K N LL+ K+ADFG SK V+ H K GT Y+
Sbjct: 130 YAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL---HSQPKSAVGTPAYI 183
Query: 254 DPEYFRSGQFTDK-SDVYSFGVVLVELLTGQKP 285
PE ++ K +DV+S GV L +L G P
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLA-DGRIVAVKKSK----IVHEGKLEEFINEVVILSQIN 137
D + + +G G G V G+ VA+KK +V K + E+ IL
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK--RTLRELKILKHFK 111
Query: 138 HRNVVKLLGCCLETEVP------LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEV 191
H N++ + L VP + V + L Q +H PLT E ++
Sbjct: 112 HDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ---PLTLEHVRYFLYQL 167
Query: 192 AGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI---VIDQTHVTTKVQG 248
L Y+HSA + HRD+K +N+L+NE K+ DFG ++ + + + T+
Sbjct: 168 LRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 249 TFGYLDPEYFRS-GQFTDKSDVYSFGVVLVELLTGQK 284
T Y PE S ++T D++S G + E+L ++
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 25/197 (12%)
Query: 99 VYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVY 158
V G +I+ KK KLE E I + H N+V+L E L++
Sbjct: 44 VLAGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIF 100
Query: 159 EFISNGTLFQ------YLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIK 212
+ ++ G LF+ Y + + ++ ++ + H M + HRD+K
Sbjct: 101 DLVTGGELFEDIVAREYYSEADAS---------HCIQQILEAVLHCHQ---MGVVHRDLK 148
Query: 213 STNILLNEKY---TAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDV 269
N+LL K K+ADFG + V + GT GYL PE R + D+
Sbjct: 149 PENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDL 207
Query: 270 YSFGVVLVELLTGQKPI 286
++ GV+L LL G P
Sbjct: 208 WACGVILYILLVGYPPF 224
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG------RIVAVKKSKIVHEGKLEEFIN---EVVIL 133
D + +++ LG G G V +I++ +K I + + +N E+ IL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT---- 189
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---------RLKEATCKLY 119
Query: 190 --EVAGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTT 244
++ ++ YLH I HRD+K N+LL+ E K+ DFG SK ++ +T +
Sbjct: 120 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMR 174
Query: 245 KVQGTFGYLDPEYFRS---GQFTDKSDVYSFGVVLVELLTGQKPI 286
+ GT YL PE S + D +S GV+L L+G P
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG------RIVAVKKSKIVHEGKLEEFIN---EVVIL 133
D + +++ LG G G V +I++ +K I + + +N E+ IL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT---- 189
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---------RLKEATCKLY 119
Query: 190 --EVAGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTT 244
++ ++ YLH I HRD+K N+LL+ E K+ DFG SK ++ +T +
Sbjct: 120 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMR 174
Query: 245 KVQGTFGYLDPEYFRS---GQFTDKSDVYSFGVVLVELLTGQKPI 286
+ GT YL PE S + D +S GV+L L+G P
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG------RIVAVKKSKIVHEGKLEEFIN---EVVIL 133
D + +++ LG G G V +I++ +K I + + +N E+ IL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT---- 189
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---------RLKEATCKLY 119
Query: 190 --EVAGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTT 244
++ ++ YLH I HRD+K N+LL+ E K+ DFG SK ++ +T +
Sbjct: 120 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMR 174
Query: 245 KVQGTFGYLDPEYFRS---GQFTDKSDVYSFGVVLVELLTGQKPI 286
+ GT YL PE S + D +S GV+L L+G P
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG------RIVAVKKSKIVHEGKLEEFIN---EVVIL 133
D + +++ LG G G V +I++ +K I + + +N E+ IL
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT---- 189
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---------RLKEATCKLY 118
Query: 190 --EVAGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTT 244
++ ++ YLH I HRD+K N+LL+ E K+ DFG SK ++ +T +
Sbjct: 119 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMR 173
Query: 245 KVQGTFGYLDPEYFRS---GQFTDKSDVYSFGVVLVELLTGQKPI 286
+ GT YL PE S + D +S GV+L L+G P
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 30/235 (12%)
Query: 80 KATDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVI---LSQ 135
K D F V R+ GQG GTV G + G VA+K K++ + + E+ I L+
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK--KVIQDPRFRN--RELQIMQDLAV 75
Query: 136 INHRNVVKL------LGCCLETEVPL-LVYEFISNGTLFQ----YLHDQNEEFPLTWEMR 184
++H N+V+L LG ++ L +V E++ + TL + Y Q P+ ++
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVF 134
Query: 185 LRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEK-YTAKVADFGTSKFIVIDQTHVT 243
L ++ S+ LH S+ + HRDIK N+L+NE T K+ DFG++K + + +V
Sbjct: 135 L---FQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 244 TKVQGTFGYLDPEY-FRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGL 297
Y PE F + +T D++S G + E++ G+ I G A L
Sbjct: 191 YICSRY--YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP--IFRGDNSAGQL 241
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S GV++ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVID 238
LT E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 239 QTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF 177
I H NVV LLG C + PL+V EF G L YL + EF
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVID 238
LT E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 239 QTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 78
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF 177
I H NVV LLG C + PL+V EF G L YL + EF
Sbjct: 79 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 123
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 83 DHFNVNRILGQGGQGTVYKGMLADG------RIVAVKKSKIVHEGKLEEFIN---EVVIL 133
D + +++ LG G G V +I++ +K I + + +N E+ IL
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 134 SQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIAT---- 189
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---------RLKEATCKLY 125
Query: 190 --EVAGSLSYLHSAASMPIYHRDIKSTNILLN---EKYTAKVADFGTSKFIVIDQTHVTT 244
++ ++ YLH I HRD+K N+LL+ E K+ DFG SK ++ +T +
Sbjct: 126 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMR 180
Query: 245 KVQGTFGYLDPEYFRS---GQFTDKSDVYSFGVVLVELLTGQKPI 286
+ GT YL PE S + D +S GV+L L+G P
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVID 238
LT E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 239 QTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 80
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF 177
I H NVV LLG C + PL+V EF G L YL + EF
Sbjct: 81 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 125
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S GV++ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 179 LTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVID 238
LT E + + +VA + +L AS HRD+ + NILL+EK K+ DFG ++ I D
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 239 QTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLT-GQKP 285
+V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 83 DHFNVNRILGQGGQGTVYKG------MLADGRIVAVK--KSKIVHEGKLEEFINEVVILS 134
D + + LG+G G V + A R VAVK K H + ++E+ IL
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 87
Query: 135 QINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF 177
I H NVV LLG C + PL+V EF G L YL + EF
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 132
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 34/235 (14%)
Query: 67 IDRCKLFTTKELDKA----TDHFNVNRILGQGGQGTVYKGMLADG---RIVAVK---KSK 116
+DR + TT LD +D ++ + +G G G ++ D +VAVK +
Sbjct: 1 MDRAPV-TTGPLDMPIMHDSDRYDFVKDIGSGNFGVAR--LMRDKLTKELVAVKYIERGA 57
Query: 117 IVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQ--- 173
+ E E IN + H N+V+ L ++ E+ S G L++ + +
Sbjct: 58 AIDENVQREIINH----RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRF 113
Query: 174 NEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGT 231
+E+ E R ++G +SY HS M I HRD+K N LL+ K+ DFG
Sbjct: 114 SED-----EARFFFQQLLSG-VSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGY 164
Query: 232 SKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDK-SDVYSFGVVLVELLTGQKP 285
SK V+ +T GT Y+ PE ++ K +DV+S GV L +L G P
Sbjct: 165 SKSSVLHSQPKSTV--GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVK---KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC 147
+G+G TVYKG+ + + + + + + + + F E L + H N+V+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 148 CLET----EVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLR-IATEVAGSLSYLHSAA 202
T + +LV E ++GTL YL + F + LR ++ L +LH+
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWCRQILKGLQFLHTR- 148
Query: 203 SMPIYHRDIKSTNILLNEKY-TAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSG 261
+ PI HRD+K NI + + K+ D G + + + V GT + PE +
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGTPEFXAPEXYEE- 204
Query: 262 QFTDKSDVYSFGVVLVELLTGQKP 285
++ + DVY+FG +E T + P
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 186 RIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVID---QTHV 242
+IA + +L +LHS S + HRD+K +N+L+N K DFG S ++V D
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 243 TTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFI 302
K ++PE + G ++ KSD++S G+ +EL + P Y
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFP--------------YDS 242
Query: 303 LSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+L +++ ++ + ++CL N K RPT E+
Sbjct: 243 WGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 48/311 (15%)
Query: 84 HFNVNRILGQGGQGTV--YKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNV 141
H+ + LG+GG V +G L DG A+K+ + EE E + NH N+
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88
Query: 142 VKLLGCCLE----TEVPLLVYEFISNGTLF---QYLHDQNEEFPLTWEMRLRIATEVAGS 194
++L+ CL L+ F GTL+ + L D+ LT + L + +
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF--LTEDQILWLLLGICRG 146
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG------ 248
L +H+ HRD+K TNILL ++ + D G+ I HV Q
Sbjct: 147 LEAIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACI---HVEGSRQALTLQDW 200
Query: 249 -----TFGYLDPEYFRSGQ---FTDKSDVYSFGVVLVELLTGQKPIILTGSK-EATGLAA 299
T Y PE F +++DV+S G VL ++ G+ P + K ++ LA
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260
Query: 300 YFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQ 359
LS+ ++ + Q+L +MT+ + +RP + + +LE +Q
Sbjct: 261 QNQLSIPQSPRHSSALWQLLN-----SMMTV----------DPHQRPHIPLLLSQLEALQ 305
Query: 360 ALQKDINVKQI 370
+ QI
Sbjct: 306 PPAPGQHTTQI 316
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 50/239 (20%)
Query: 82 TDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLE--EFINEVVILSQINH 138
D + + ++G G G V + + R+VA+KK V E ++ + E+ IL+++NH
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH 111
Query: 139 RNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEF------PLTWEMRLRIATEVA 192
+VVK+L +P V +F L+ L + +F P+ + L I T +
Sbjct: 112 DHVVKVLDIV----IPKDVEKF---DELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLY 163
Query: 193 GSL---SYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI-------------- 235
L Y+HSA I HRD+K N L+N+ + KV DFG ++ +
Sbjct: 164 NLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220
Query: 236 ------VIDQTHVTTKVQGTFGYLDPEYFRSGQ-------FTDKSDVYSFGVVLVELLT 281
++ H + G++ ++R+ + +T+ DV+S G + ELL
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 91 LGQGGQGTVYKGMLADGR----IVAVKKSKI-----VHEGKLEEFINEVVILSQINHRNV 141
LG G G V+ + + + +KK K+ + + KL + E+ ILS++ H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 142 VKLLGCCLETEVPLLVYEFISNGT-LFQYL--HDQNEEFPLTWEMRLRIATEVAGSLSYL 198
+K+L LV E +G LF ++ H + +E PL I ++ ++ YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDE-PLA----SYIFRQLVSAVGYL 146
Query: 199 HSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF 258
I HRDIK NI++ E +T K+ DFG++ + +++ + GT Y PE
Sbjct: 147 RLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY--LERGKLFYTFCGTIEYCAPEVL 201
Query: 259 RSGQFTDKS-DVYSFGVVLVELLTGQKPI 286
+ +++S GV L L+ + P
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 89 RILGQGGQGTVYKGM-LADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
+ +G G QG V G VAVKK ++ + E+V+L +NH+N++ LL
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 146 GCCL------ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
E + LV E + + L Q +H + L E + ++ + +LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME-----LDHERMSYLLYQMLCGIKHLH 141
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + T T Y PE
Sbjct: 142 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEVIL 196
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPIILTGS 291
+ + D++S G ++ EL+ G +I G+
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKGS--VIFQGT 226
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 85 FNVNRILGQGGQGT-VYKGMLADGRIVAVKKSKIVHEGKLEEFIN-EVVILSQIN-HRNV 141
F +LG G +GT VY+GM D R VAVK +I+ E F + EV +L + + H NV
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVK--RILPE--CFSFADREVQLLRESDEHPNV 80
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSA 201
++ + + + E + TL +Y+ + ++F + + + L++LH
Sbjct: 81 IRYFCTEKDRQFQYIAIELCA-ATLQEYV--EQKDFAHLGLEPITLLQQTTSGLAHLH-- 135
Query: 202 ASMPIYHRDIKSTNILL-----NEKYTAKVADFGTSKFIVIDQTHVTTK--VQGTFGYLD 254
S+ I HRD+K NIL+ + K A ++DFG K + + + + + V GT G++
Sbjct: 136 -SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 255 PEYFRSG---QFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLAAYFILSMEENRL 310
PE T D++S G V +++ G P + ++A L L
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSL------- 247
Query: 311 YDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQ- 369
D L +K E + L + + ++ ++RP+ K V ++ +L+K + Q
Sbjct: 248 -DCLHP------EKHEDVIARELIEKMIAMDPQKRPSAKHV-LKHPFFWSLEKQLQFFQD 299
Query: 370 ICDEIE 375
+ D IE
Sbjct: 300 VSDRIE 305
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 67 IDRCKLFT--TKELDKATDHFNVNRILGQGGQGTV-YKGMLADGRIVAVK---KSKIVHE 120
++ K FT KE+ + F + +++G+G G V M RI A+K K +++
Sbjct: 72 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 131
Query: 121 GKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLT 180
+ F E +L + + + L + LV ++ G L L ++ P
Sbjct: 132 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE- 190
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQT 240
+M E+ ++ +H + HRDIK N+LL+ ++ADFG+ + D T
Sbjct: 191 -DMARFYIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 246
Query: 241 HVTTKVQGTFGYLDPEYFRS-----GQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
++ GT Y+ PE ++ G++ + D +S GV + E+L G+ P E
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 306
Query: 296 G 296
G
Sbjct: 307 G 307
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 67 IDRCKLFT--TKELDKATDHFNVNRILGQGGQGTV-YKGMLADGRIVAVK---KSKIVHE 120
++ K FT KE+ + F + +++G+G G V M RI A+K K +++
Sbjct: 56 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 115
Query: 121 GKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLT 180
+ F E +L + + + L + LV ++ G L L ++ P
Sbjct: 116 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE- 174
Query: 181 WEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQT 240
+M E+ ++ +H + HRDIK N+LL+ ++ADFG+ + D T
Sbjct: 175 -DMARFYIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 230
Query: 241 HVTTKVQGTFGYLDPEYFRS-----GQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
++ GT Y+ PE ++ G++ + D +S GV + E+L G+ P E
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 290
Query: 296 G 296
G
Sbjct: 291 G 291
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEG-KLEEFI-NEVVILSQINHR 139
+D + + + +G G G ++ D + + K + G K++E + E++ + H
Sbjct: 17 SDRYELVKDIGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHP 74
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQ---NEEFPLTWEMRLRIATEVAGSLS 196
N+V+ L +V E+ S G LF+ + + +E+ E R ++G +S
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARFFFQQLISG-VS 128
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
Y H +M + HRD+K N LL+ K+ DFG SK V+ +T GT Y+
Sbjct: 129 YCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIA 183
Query: 255 PEYFRSGQFTDK-SDVYSFGVVLVELLTGQKP 285
PE ++ K +DV+S GV L +L G P
Sbjct: 184 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 91 LGQGGQGTVYKGMLADGRIVA-VKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
L + G ++KG IV V K + K +F E L +H NV+ +LG C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 150 ETEV--PLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
P L+ ++ G+L+ LH + F + ++ A ++A +++LH+ + I
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLH-EGTNFVVDQSQAVKFALDMARGMAFLHTLEPL-IP 135
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF-RSGQFTDK 266
+ S +++++E TA+++ KF + ++ PE + + T++
Sbjct: 136 RHALNSRSVMIDEDMTARIS-MADVKFSFQSPGRMYAP-----AWVAPEALQKKPEDTNR 189
Query: 267 --SDVYSFGVVLVELLTGQKPI 286
+D++SF V+L EL+T + P
Sbjct: 190 RSADMWSFAVLLWELVTREVPF 211
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 31 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 89 LLNVF----TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S G ++ E++ G
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 116/292 (39%), Gaps = 52/292 (17%)
Query: 79 DKATDHFNVNRILGQGGQGTVYKGMLADGRI---VA---VKKSKIVHEGKLEEF------ 126
D + V +++G+G G V K D ++ VA V+ K H EE
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 127 --------INEVVILSQINHRNVVKLLGCCLETEV-PLLVYEFISNGTLFQYLHDQNEEF 177
+N + +L RN + C+ E+ + +YE I Q
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHI-----CMTFELLSMNLYELIKKNKF------QGFSL 199
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFI 235
PL + A + L LH I H D+K NILL ++ + KV DFG+S +
Sbjct: 200 PLV----RKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCY- 251
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
+ V T +Q F Y PE ++ D++S G +L ELLTG +L G E
Sbjct: 252 --EHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTGYP--LLPGEDEGD 306
Query: 296 GLAAYF-ILSMEENRLYDFLDDQVLKVGQK--EEIMTIATLATRCLNLNGKR 344
LA +L M +L D V K T+ TL+ + LNG R
Sbjct: 307 QLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGR 358
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 31/220 (14%)
Query: 82 TDHFNVNRILGQGGQGTVYK------GMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQ 135
T+ + + LG+G V + G I+ KK KLE E I
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 136 INHRNVVKLLGCCLETEVPLLVYEFISNGTLFQ------YLHDQNEEFPLTWEMRLRIAT 189
+ H N+V+L E L+++ ++ G LF+ Y + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---------HCIQ 117
Query: 190 EVAGSLSYLHSAASMPIYHRDIKSTNILLNEKY---TAKVADFGTSKFIVIDQTHVTTKV 246
++ ++ + H M + HR++K N+LL K K+ADFG + + +Q
Sbjct: 118 QILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGF 173
Query: 247 QGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPI 286
GT GYL PE R + D+++ GV+L LL G P
Sbjct: 174 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 116/292 (39%), Gaps = 52/292 (17%)
Query: 79 DKATDHFNVNRILGQGGQGTVYKGMLADGRI---VA---VKKSKIVHEGKLEEF------ 126
D + V +++G+G G V K D ++ VA V+ K H EE
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 127 --------INEVVILSQINHRNVVKLLGCCLETEV-PLLVYEFISNGTLFQYLHDQNEEF 177
+N + +L RN + C+ E+ + +YE I Q
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHI-----CMTFELLSMNLYELIKKNKF------QGFSL 199
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFI 235
PL + A + L LH I H D+K NILL ++ + KV DFG+S +
Sbjct: 200 PLV----RKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCY- 251
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
+ V T +Q F Y PE ++ D++S G +L ELLTG +L G E
Sbjct: 252 --EHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTGYP--LLPGEDEGD 306
Query: 296 GLAAYF-ILSMEENRLYDFLDDQVLKVGQK--EEIMTIATLATRCLNLNGKR 344
LA +L M +L D V K T+ TL+ + LNG R
Sbjct: 307 QLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGR 358
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 68 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 126 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 182 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGCC 148
+G+G G V+ G G VAVK E E I + V++ H N++ +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLM---RHENILGFIAAD 100
Query: 149 LE-----TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH---- 199
++ T++ L+ ++ NG+L+ YL L + L++A L +LH
Sbjct: 101 IKGTGSWTQL-YLITDYHENGSLYDYLKSTT----LDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 200 SAASMP-IYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV----TTKVQGTFGYLD 254
S P I HRD+KS NIL+ + T +AD G + + D V T+V GT Y+
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMP 214
Query: 255 PEYFRSG------QFTDKSDVYSFGVVLVEL 279
PE Q +D+YSFG++L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 21/174 (12%)
Query: 129 EVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI 187
EV +L Q HRNV++L+ E + LV+E + G++ ++H + L + +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---V 116
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVI--DQTHV 242
+VA +L +LH+ I HRD+K NIL N+ K+ DFG I + D + +
Sbjct: 117 VQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPI 173
Query: 243 TTK----VQGTFGYLDPEYFRSGQ-----FTDKSDVYSFGVVLVELLTGQKPII 287
+T G+ Y+ PE + + + D++S GV+L LL+G P +
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 23 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 81 LLNVF----TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 137 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVI 237
P+T E + + +VA + +L S + HRD+ + NILL+E K+ DFG ++ I
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCI---HRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 238 DQTHVTT-KVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATG 296
+ +V + ++ PE ++ KSDV+S+GV+L E+ + G
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS-------------LG 298
Query: 297 LAAYFILSMEEN---RLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAM 353
+ Y + M+E+ RL + + + + E I + C + + K RP E+
Sbjct: 299 GSPYPGVQMDEDFCSRLREGMRMRAPEYSTPE----IYQIMLDCWHRDPKERPRFAELVE 354
Query: 354 EL 355
+L
Sbjct: 355 KL 356
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 73 FTTKELDKATDHFNVNRILGQGGQGTVYKGML------ADGRIVAVKKSKIVHEG----K 122
+ + + A + + + LG+G G V + R VAVK ++ EG +
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVK---MLKEGATASE 73
Query: 123 LEEFINEVVILSQINHR-NVVKLLGCCLETEVPLLV-YEFISNGTLFQYLHDQNEEF 177
+ + E+ IL+ I H NVV LLG C + PL+V E+ G L YL + + F
Sbjct: 74 YKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLF 130
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 29 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 87 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 143 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 197
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 198 GMGYKENVDIWSVGCIMGEMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTVYKGM-LADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVKLL 145
+ +G G QG V G VAVKK ++ + E+V+L +NH+N++ LL
Sbjct: 30 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 146 GCCL------ETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH 199
E + LV E + + L Q +H + L E + ++ + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME-----LDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ D++S G ++ EL+ G
Sbjct: 199 GMGYAANVDIWSVGCIMGELVKG 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 31 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 89 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 82 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 138 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVIL 198
Query: 260 SGQFTDKSDVYSFGVVLVELLTG 282
+ + D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 93
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 144
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT----------GYVA 191
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 23 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 81 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 137 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 31 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 89 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 82 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 138 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 68 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + L L D N + L E + ++ + +LH
Sbjct: 126 LLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 182 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 93
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 144
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT----------GYVA 191
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 28/209 (13%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKLEEFINEVVILSQI--NHRNVVKLLGCC 148
+G+G G V++G L G VAVK I + + E I + + H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK---IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 149 LETEVP----LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH----- 199
+ + L+ + +G+L+ +L Q E L LR+A A L++LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIFG 127
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHV---TTKVQGTFGYLDPE 256
+ I HRD KS N+L+ +AD G + ++ GT Y+ PE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 257 YFRSGQFTD------KSDVYSFGVVLVEL 279
TD +D+++FG+VL E+
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 93
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 144
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT----------GYVA 191
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 83 DHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQINHRNV 141
D++++ LG G G V++ + A GR+ K + NE+ I++Q++H +
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 142 VKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSA 201
+ L + +L+ EF+S G LF + E++ ++ + + L ++H
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 202 ASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQ-THVTTKVQGTFGYLDPEYF 258
+ I H DIK NI+ K + K+ DFG + + D+ VTT T + PE
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIV 222
Query: 259 RSGQFTDKSDVYSFGVVLVELLTGQKPI 286
+D+++ GV+ LL+G P
Sbjct: 223 DREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 96
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 147
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 148 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 194
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 42/213 (19%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFG 251
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ H ++ G T
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRW 187
Query: 252 YLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQ 283
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 42/213 (19%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFG 251
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ H ++ G T
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRW 187
Query: 252 YLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQ 283
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 129 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQ---NEEFPLTWEMRL 185
E++ + H N+V+ L +V E+ S G LF+ + + +E+ E R
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARF 119
Query: 186 RIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQTHVT 243
++G +SY H +M + HRD+K N LL+ K+ DFG SK V+ +
Sbjct: 120 FFQQLISG-VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 175
Query: 244 TKVQGTFGYLDPEYFRSGQFTDK-SDVYSFGVVLVELLTGQKP 285
T GT Y+ PE ++ K +DV+S GV L +L G P
Sbjct: 176 TV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 91
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 142
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYVA 189
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 42/213 (19%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 82
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 133
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFG 251
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ H ++ G T
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRW 183
Query: 252 YLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQ 283
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 42/213 (19%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 106
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 157
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFG 251
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ H ++ G T
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRW 207
Query: 252 YLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQ 283
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 52/220 (23%)
Query: 89 RILGQGGQGTVYKGMLADGRI---VAVKK-----SKIVHEGKLEEFINEVVILSQINHRN 140
R +G G G+V D R+ VAVKK ++H + E+ +L + H N
Sbjct: 34 RPVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRT---YRELRLLKHLKHEN 88
Query: 141 VVKLL-----GCCLE--TEVPL---LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
V+ LL +E +EV L L+ ++N Q L D++ +F + +
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF---------LVYQ 139
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTF 250
+ L Y+HSA I HRD+K +N+ +NE ++ DFG ++ + T
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT---------- 186
Query: 251 GYLDPEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
GY+ ++R+ + + D++S G ++ ELL G+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 106
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 157
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 204
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 105
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 156
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 157 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 203
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 97
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 148
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 149 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYVA 195
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 42/213 (19%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFG 251
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ H ++ G T
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRW 187
Query: 252 YLDPE-YFRSGQFTDKSDVYSFGVVLVELLTGQ 283
Y PE + + D++S G ++ ELLTG+
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 65 GSIDRCKL---FTTKELDKAT----DHFNVNRILGQGGQGTV---YKGMLADGRIVAVKK 114
GS+ R K F + E+ +T + + +G G QG V Y +L R VA+KK
Sbjct: 1 GSMSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKK 58
Query: 115 --SKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHD 172
++ + E+V++ +NH+N++ LL P E + + L D
Sbjct: 59 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF----TPQKSLEEFQDVYIVMELMD 114
Query: 173 QNE----EFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVAD 228
N + L E + ++ + +LHSA I HRD+K +NI++ T K+ D
Sbjct: 115 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILD 171
Query: 229 FGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTG 282
FG ++ + + T Y PE + + D++S G ++ E++ G
Sbjct: 172 FGLAR--TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 92
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 143
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 190
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 82
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 133
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 180
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 91
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 142
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYVA 189
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGC 147
+G G G+V + G VA+KK + ++ + E+++L + H NV+ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
Y+F Q + + E + ++ L Y+HSA +
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VV 148
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYLDPEYFRSGQFT 264
HRD+K N+ +NE K+ DFG ++ H ++ G T Y PE S
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILSWMHY 201
Query: 265 DKS-DVYSFGVVLVELLTGQ 283
+++ D++S G ++ E+LTG+
Sbjct: 202 NQTVDIWSVGCIMAEMLTGK 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 185 LRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTT 244
L I ++A ++ +LHS M HRD+K +NI KV DFG + D+ T
Sbjct: 167 LHIFIQIAEAVEFLHSKGLM---HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 245 KVQ-----------GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELL 280
GT Y+ PE ++ K D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 52/220 (23%)
Query: 89 RILGQGGQGTVYKGMLADGRI---VAVKK-----SKIVHEGKLEEFINEVVILSQINHRN 140
R +G G G+V D R+ VAVKK ++H + E+ +L + H N
Sbjct: 34 RPVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRT---YRELRLLKHLKHEN 88
Query: 141 VVKLL-----GCCLE--TEVPL---LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
V+ LL +E +EV L L+ ++N Q L D++ +F + +
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF---------LVYQ 139
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTF 250
+ L Y+HSA I HRD+K +N+ +NE ++ DFG ++ + T
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT---------- 186
Query: 251 GYLDPEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
GY+ ++R+ + + D++S G ++ ELL G+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 73 FTTKELDKA----TDHFNVNRILGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGK 122
F +EL+K + + +G G G+V + G +AVKK I+H +
Sbjct: 37 FYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR 96
Query: 123 LEEFINEVVILSQINHRNVVKLL-----GCCLE--TEVPLLVYEF---ISNGTLFQYLHD 172
E+ +L + H NV+ LL LE +V L+ + ++N Q L D
Sbjct: 97 T---YRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 153
Query: 173 QNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTS 232
+ +F + ++ L Y+HSA I HRD+K +N+ +NE K+ DFG +
Sbjct: 154 DHVQF---------LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 201
Query: 233 KFIVIDQTHVTTKVQGTFGYLDPEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
+ + T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 202 RHTDDEMT----------GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 92
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 143
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT----------GYVA 190
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 88
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 139
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT----------GYVA 186
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 52/220 (23%)
Query: 89 RILGQGGQGTVYKGMLADGRI---VAVKK-----SKIVHEGKLEEFINEVVILSQINHRN 140
R +G G G+V D R+ VAVKK ++H + E+ +L + H N
Sbjct: 26 RPVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRT---YRELRLLKHLKHEN 80
Query: 141 VVKLL-----GCCLE--TEVPL---LVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATE 190
V+ LL +E +EV L L+ ++N Q L D++ +F + +
Sbjct: 81 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF---------LVYQ 131
Query: 191 VAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTF 250
+ L Y+HSA I HRD+K +N+ +NE ++ DFG ++ + T
Sbjct: 132 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT---------- 178
Query: 251 GYLDPEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
GY+ ++R+ + + D++S G ++ ELL G+
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 88 NRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQIN-HRNVVKLL 145
+ +LG+G V + L +G+ AVK + EV L Q ++N+++L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 146 GCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMP 205
+ LV+E + G++ ++ Q R+ +VA +L +LH+
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKH---FNEREASRVVRDVAAALDFLHTKG--- 131
Query: 206 IYHRDIKSTNILLN--EKYTA-KVADFGTSKFIVIDQ--THVTTK----VQGTFGYLDPE 256
I HRD+K NIL EK + K+ DF + ++ T +TT G+ Y+ PE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 257 ----YFRSGQFTDKS-DVYSFGVVLVELLTGQKPII 287
+ F DK D++S GVVL +L+G P +
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV 227
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 115/239 (48%), Gaps = 22/239 (9%)
Query: 83 DHFNVNRILGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKLEEFINEVVILSQINH-RN 140
D + + R LG+G V++ + + + V VK K V + K++ E+ IL + N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPN 93
Query: 141 VVKLLGCCLE--TEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYL 198
++ L + + P LV+E ++N T F+ L+ ++ + + M E+ +L Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNN-TDFKQLYQTLTDYDIRFYM-----YEILKALDYC 147
Query: 199 HSAASMPIYHRDIKSTNILLNEKYTA-KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEY 257
HS M I HRD+K N++++ ++ ++ D+G ++F Q + +V + + PE
Sbjct: 148 HS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPEL 202
Query: 258 FRSGQFTDKS-DVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLD 315
Q D S D++S G +L ++ ++P + +L E+ LYD++D
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED--LYDYID 259
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLLGC 147
+G G G+V + G VA+KK + ++ + E+++L + H NV+ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 148 CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
Y+F Q + + E + ++ L Y+HSA +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VV 166
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGYLDPEYFRSGQFT 264
HRD+K N+ +NE K+ DFG ++ H ++ G T Y PE S
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILSWMHY 219
Query: 265 DKS-DVYSFGVVLVELLTGQ 283
+++ D++S G ++ E+LTG+
Sbjct: 220 NQTVDIWSVGCIMAEMLTGK 239
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 97
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 148
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 149 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 195
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 93
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 144
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 191
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 42/213 (19%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFG 251
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ H ++ G T
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRW 187
Query: 252 YLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQ 283
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 88
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 139
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 186
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 91
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 142
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 189
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 85
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 86 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 136
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 137 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 183
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 98
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 149
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 150 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 196
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 42/213 (19%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFG 251
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ H ++ G T
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVATRW 187
Query: 252 YLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQ 283
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRT---YRELRLLKHMKHENVIGL 98
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 149
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 150 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 196
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 98
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 149
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 150 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 196
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 88
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 139
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 186
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 88
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 139
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 186
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 83
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 134
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 135 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 181
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 91
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 142
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 189
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 44/217 (20%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVK--KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC- 147
+G+G G V++G G VAVK S+ E I + V+L H N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 105
Query: 148 ----CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH---- 199
T++ LV ++ +G+LF YL+ + +T E +++A A L++LH
Sbjct: 106 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 160
Query: 200 -SAASMPIYHRDIKSTNILLNEKYTAKVADFG-------TSKFIVIDQTHVTTKVQGTFG 251
+ I HRD+KS NIL+ + T +AD G + I I H GT
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKR 216
Query: 252 YLDPE---------YFRSGQFTDKSDVYSFGVVLVEL 279
Y+ PE +F S + ++D+Y+ G+V E+
Sbjct: 217 YMAPEVLDDSINMKHFESFK---RADIYAMGLVFWEI 250
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 83
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 134
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 135 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 181
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 109
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 160
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 161 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 207
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 44/217 (20%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVK--KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC- 147
+G+G G V++G G VAVK S+ E I + V+L H N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 67
Query: 148 ----CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH---- 199
T++ LV ++ +G+LF YL+ + +T E +++A A L++LH
Sbjct: 68 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 200 -SAASMPIYHRDIKSTNILLNEKYTAKVADFG-------TSKFIVIDQTHVTTKVQGTFG 251
+ I HRD+KS NIL+ + T +AD G + I I H GT
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKR 178
Query: 252 YLDPE---------YFRSGQFTDKSDVYSFGVVLVEL 279
Y+ PE +F S + ++D+Y+ G+V E+
Sbjct: 179 YMAPEVLDDSINMKHFESFK---RADIYAMGLVFWEI 212
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 92
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 143
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 190
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVK--KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC- 147
+G+G G V++G G VAVK S+ E I + V+L H N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 72
Query: 148 ----CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH---- 199
T++ LV ++ +G+LF YL+ + +T E +++A A L++LH
Sbjct: 73 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 200 -SAASMPIYHRDIKSTNILLNEKYTAKVADFG-------TSKFIVIDQTHVTTKVQGTFG 251
+ I HRD+KS NIL+ + T +AD G + I I H GT
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKR 183
Query: 252 YLDPEYF------RSGQFTDKSDVYSFGVVLVEL 279
Y+ PE + + ++D+Y+ G+V E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 42/213 (19%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 109
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 160
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFG 251
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ H ++ G T
Sbjct: 161 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRW 210
Query: 252 YLDPEYFRSGQFTDKS-DVYSFGVVLVELLTGQ 283
Y PE + +++ D++S G ++ ELLTG+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 105
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 156
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 157 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 203
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 106
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 157
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 204
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 82
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 133
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 180
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 44/217 (20%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVK--KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC- 147
+G+G G V++G G VAVK S+ E I + V+L H N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 66
Query: 148 ----CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH---- 199
T++ LV ++ +G+LF YL+ + +T E +++A A L++LH
Sbjct: 67 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 200 -SAASMPIYHRDIKSTNILLNEKYTAKVADFG-------TSKFIVIDQTHVTTKVQGTFG 251
+ I HRD+KS NIL+ + T +AD G + I I H GT
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKR 177
Query: 252 YLDPE---------YFRSGQFTDKSDVYSFGVVLVEL 279
Y+ PE +F S + ++D+Y+ G+V E+
Sbjct: 178 YMAPEVLDDSINMKHFESFK---RADIYAMGLVFWEI 211
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 92
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 143
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 190
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 44/217 (20%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVK--KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC- 147
+G+G G V++G G VAVK S+ E I + V+L H N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 92
Query: 148 ----CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH---- 199
T++ LV ++ +G+LF YL+ + +T E +++A A L++LH
Sbjct: 93 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 147
Query: 200 -SAASMPIYHRDIKSTNILLNEKYTAKVADFG-------TSKFIVIDQTHVTTKVQGTFG 251
+ I HRD+KS NIL+ + T +AD G + I I H GT
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKR 203
Query: 252 YLDPE---------YFRSGQFTDKSDVYSFGVVLVEL 279
Y+ PE +F S + ++D+Y+ G+V E+
Sbjct: 204 YMAPEVLDDSINMKHFESFK---RADIYAMGLVFWEI 237
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 115/292 (39%), Gaps = 52/292 (17%)
Query: 79 DKATDHFNVNRILGQGGQGTVYKGMLADGRI---VA---VKKSKIVHEGKLEEF------ 126
D + V +++G+G G V K D ++ VA V+ K H EE
Sbjct: 93 DHVAYRYEVLKVIGKGXFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 127 --------INEVVILSQINHRNVVKLLGCCLETEV-PLLVYEFISNGTLFQYLHDQNEEF 177
+N + +L RN + C+ E+ + +YE I Q
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHI-----CMTFELLSMNLYELIKKNKF------QGFSL 199
Query: 178 PLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFI 235
PL + A + L LH I H D+K NILL ++ + KV DFG+S +
Sbjct: 200 PLV----RKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCY- 251
Query: 236 VIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEAT 295
+ V +Q F Y PE ++ D++S G +L ELLTG +L G E
Sbjct: 252 --EHQRVYXXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTGYP--LLPGEDEGD 306
Query: 296 GLAAYF-ILSMEENRLYDFLDDQVLKVGQK--EEIMTIATLATRCLNLNGKR 344
LA +L M +L D V K T+ TL+ + LNG R
Sbjct: 307 QLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGR 358
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 84
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 85 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 135
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 136 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 182
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 91 LGQGGQGTVYKGMLADGRIVAVK--KSKIVHEGKLEEFINEVVILSQINHRNVVKLLGC- 147
+G+G G V++G G VAVK S+ E I + V+L H N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 69
Query: 148 ----CLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLH---- 199
T++ LV ++ +G+LF YL+ + +T E +++A A L++LH
Sbjct: 70 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 200 -SAASMPIYHRDIKSTNILLNEKYTAKVADFG-------TSKFIVIDQTHVTTKVQGTFG 251
+ I HRD+KS NIL+ + T +AD G + I I H GT
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKR 180
Query: 252 YLDPEYF------RSGQFTDKSDVYSFGVVLVEL 279
Y+ PE + + ++D+Y+ G+V E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEG-KLEEFI-NEVVILSQINHR 139
+D + + + +G G G ++ D + + K + G K++E + E++ + H
Sbjct: 18 SDRYELVKDIGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHP 75
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQ---NEEFPLTWEMRLRIATEVAGSLS 196
N+V+ L +V E+ S G LF+ + + +E+ E R ++G +S
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARFFFQQLISG-VS 129
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
Y H +M + HRD+K N LL+ K+ FG SK V+ +T GT Y+
Sbjct: 130 YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIA 184
Query: 255 PEYFRSGQFTDK-SDVYSFGVVLVELLTGQKP 285
PE ++ K +DV+S GV L +L G P
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG + + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 124 EEFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFISNGTL-FQYLHDQNEEFPLTWE 182
E+ E I + H ++V+LL + +V+EF+ L F+ + + F +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 183 MRLRIATEVAGSLSYLHSAASMPIYHRDIKSTNILLNEKYTA---KVADFGTSKFIVIDQ 239
+ ++ +L Y H I HRD+K N+LL K + K+ DFG + I + +
Sbjct: 131 VASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGE 185
Query: 240 THVTTKVQ-GTFGYLDPEYFRSGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKE 293
+ + + GT ++ PE + + DV+ GV+L LL+G P G+KE
Sbjct: 186 SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP--FYGTKE 238
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 129 EVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRI 187
EV +L Q HRNV++L+ E + LV+E + G++ ++H + L + +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---V 116
Query: 188 ATEVAGSLSYLHSAASMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVI--DQTHV 242
+VA +L +LH+ I HRD+K NIL N+ K+ DF I + D + +
Sbjct: 117 VQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI 173
Query: 243 TTK----VQGTFGYLDPEYFRSGQ-----FTDKSDVYSFGVVLVELLTGQKPII 287
+T G+ Y+ PE + + + D++S GV+L LL+G P +
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 35 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 93 LLNVF----TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 149 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 203
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 204 GMGYKENVDLWSVGCIMGEMV 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 82 LLNVF----TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
SA I HRD+K +NI++ T K+ DFG ++ + + T T Y PE
Sbjct: 138 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 260 SGQFTDKSDVYSFGVVLVELL 280
+ + D++S G ++ E++
Sbjct: 193 GMGYKENVDLWSVGCIMGEMV 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 196
Query: 215 NILLNEKYTA---KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 254
Query: 272 FGVVLVELLTGQKP 285
GV++ LL G P
Sbjct: 255 LGVIMYILLCGYPP 268
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 35/291 (12%)
Query: 84 HFNVNRILGQGGQGTVYKGMLADGRIV-AVKKSKIVHEGKLEEFINEVVILSQINHRNVV 142
++ + +G+G G V + RI A KK ++ F E+ I+ ++H N++
Sbjct: 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAA 202
+L + LV E + G LF+ + + RI +V +++Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCH--- 123
Query: 203 SMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
+ + HRD+K N L + K+ DFG + + + TKV GT Y+ P+
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-GTPYYVSPQVL- 180
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVL 319
G + + D +S GV++ LL G P E +L + E + F + L
Sbjct: 181 EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV-------MLKIREG-TFTFPEKDWL 232
Query: 320 KVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQI 370
V + E +L R L + K+R T +QAL+ + KQ+
Sbjct: 233 NVSPQAE-----SLIRRLLTKSPKQRIT---------SLQALEHEWFEKQL 269
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 215 NILLNEKYTA---KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 272 FGVVLVELLTGQKP 285
GV++ LL G P
Sbjct: 205 LGVIMYILLCGYPP 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 215 NILLNEKYTA---KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 248
Query: 272 FGVVLVELLTGQKP 285
GV++ LL G P
Sbjct: 249 LGVIMYILLCGYPP 262
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 215 NILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 202
Query: 272 FGVVLVELLTGQKPI 286
GV++ LL G P
Sbjct: 203 LGVIMYILLCGYPPF 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 160
Query: 215 NILLNEKYTA---KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 218
Query: 272 FGVVLVELLTGQKPI 286
GV++ LL G P
Sbjct: 219 LGVIMYILLCGYPPF 233
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 35/291 (12%)
Query: 84 HFNVNRILGQGGQGTVYKGMLADGRIV-AVKKSKIVHEGKLEEFINEVVILSQINHRNVV 142
++ + +G+G G V + RI A KK ++ F E+ I+ ++H N++
Sbjct: 27 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAA 202
+L + LV E + G LF+ + + RI +V +++Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCH--- 140
Query: 203 SMPIYHRDIKSTNILL---NEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFR 259
+ + HRD+K N L + K+ DFG + + + TKV GT Y+ P+
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-GTPYYVSPQVL- 197
Query: 260 SGQFTDKSDVYSFGVVLVELLTGQKPIILTGSKEATGLAAYFILSMEENRLYDFLDDQVL 319
G + + D +S GV++ LL G P E +L + E + F + L
Sbjct: 198 EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV-------MLKIREG-TFTFPEKDWL 249
Query: 320 KVGQKEEIMTIATLATRCLNLNGKRRPTMKEVAMELERIQALQKDINVKQI 370
V + E +L R L + K+R T +QAL+ + KQ+
Sbjct: 250 NVSPQAE-----SLIRRLLTKSPKQRIT---------SLQALEHEWFEKQL 286
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 34/224 (15%)
Query: 85 FNVNRILGQGGQGTVYKGML-ADGRIVAVKKSKIVHEGKLE-EFINEVVILSQINHRNVV 142
F + +LG+G G V G IVA+KK + + + E+ IL H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 143 KLLGC----CLETEVPLLVYEFISNGTLF-----QYLHDQNEEFPLTWEMRLRIATEVAG 193
+ E + + + + L Q L D + ++ + +R
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR--------- 123
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI---VIDQTHVTTKVQGTF 250
++ LH + + HRD+K +N+L+N KV DFG ++ I D + T + G
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 251 GYLDPEYFR-------SGQFTDKSDVYSFGVVLVELLTGQKPII 287
Y+ ++R S +++ DV+S G +L EL ++PI
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIF 223
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 145
Query: 215 NILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 203
Query: 272 FGVVLVELLTGQKPI 286
GV++ LL G P
Sbjct: 204 LGVIMYILLCGYPPF 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 215 NILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 272 FGVVLVELLTGQKPI 286
GV++ LL G P
Sbjct: 205 LGVIMYILLCGYPPF 219
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ D+G ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 40/211 (18%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE--- 256
SA I HRD+K +NI++ T K+ DFG + + GT ++PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMEPEVVT 188
Query: 257 -YFRSGQ------FTDKSDVYSFGVVLVELL 280
Y+R+ + + + D++S G ++ E++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 82 TDHFNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEG-KLEEFI-NEVVILSQINHR 139
+D + + + +G G G ++ D + + K + G K++E + E++ + H
Sbjct: 18 SDRYELVKDIGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHP 75
Query: 140 NVVKLLGCCLETEVPLLVYEFISNGTLFQYLHDQ---NEEFPLTWEMRLRIATEVAGSLS 196
N+V+ L +V E+ S G LF+ + + +E+ E R ++G +S
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARFFFQQLISG-VS 129
Query: 197 YLHSAASMPIYHRDIKSTNILLNEKYTA--KVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
Y H +M + HRD+K N LL+ K+ FG SK V+ T GT Y+
Sbjct: 130 YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT--VGTPAYIA 184
Query: 255 PEYFRSGQFTDK-SDVYSFGVVLVELLTGQKP 285
PE ++ K +DV+S GV L +L G P
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 152
Query: 215 NILLNEKYTA---KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 210
Query: 272 FGVVLVELLTGQKPI 286
GV++ LL G P
Sbjct: 211 LGVIMYILLCGYPPF 225
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 150
Query: 215 NILLNEKYTA---KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 208
Query: 272 FGVVLVELLTGQKPI 286
GV++ LL G P
Sbjct: 209 LGVIMYILLCGYPPF 223
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 151
Query: 215 NILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 209
Query: 272 FGVVLVELLTGQKPI 286
GV++ LL G P
Sbjct: 210 LGVIMYILLCGYPPF 224
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 82
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N L D + +F + ++
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF---------LIYQILRG 133
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DFG ++ + T GY+
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVA 180
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 40/211 (18%)
Query: 89 RILGQGGQGTV---YKGMLADGRIVAVKK--SKIVHEGKLEEFINEVVILSQINHRNVVK 143
+ +G G QG V Y +L R VA+KK ++ + E+V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 144 LLGCCLETEVPLLVYEFISNGTLFQYLHDQNE----EFPLTWEMRLRIATEVAGSLSYLH 199
LL P E + + L D N + L E + ++ + +LH
Sbjct: 88 LLNVF----TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 200 SAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPE--- 256
SA I HRD+K +NI++ T K+ DFG + + GT ++PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLA------------RTAGTSFMMEPEVVT 188
Query: 257 -YFRSGQ------FTDKSDVYSFGVVLVELL 280
Y+R+ + + + D++S G ++ E++
Sbjct: 189 RYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 34/224 (15%)
Query: 85 FNVNRILGQGGQGTVYKGML-ADGRIVAVKKSKIVHEGKLE-EFINEVVILSQINHRNVV 142
F + +LG+G G V G IVA+KK + + + E+ IL H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 143 KLLGC----CLETEVPLLVYEFISNGTLF-----QYLHDQNEEFPLTWEMRLRIATEVAG 193
+ E + + + + L Q L D + ++ + +R
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR--------- 123
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI---VIDQTHVTTKVQGTF 250
++ LH + + HRD+K +N+L+N KV DFG ++ I D + T + G
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 251 GYLDPEYFR-------SGQFTDKSDVYSFGVVLVELLTGQKPII 287
++ ++R S +++ DV+S G +L EL ++PI
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIF 223
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ DF ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 58/297 (19%)
Query: 89 RILGQGGQGT-VYKGMLADGRIVAVKKSKIVHEGKLEEF----INEVVILSQI-NHRNVV 142
+ILG G GT V++G GR VAVK+ I +F + E+ +L++ +H NV+
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVI 72
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQN---EEFPLTWEMR-LRIATEVAGSLSYL 198
+ C T+ L + + N L + +N E L E + + ++A +++L
Sbjct: 73 RYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 199 HSAASMPIYHRDIKSTNILL--NEKYTAK-----------VADFGTSKFIVIDQTHVTTK 245
H S+ I HRD+K NIL+ + ++TA ++DFG K + Q+ T
Sbjct: 132 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 246 VQ---GTFGYLDPEYFRSG-------QFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEA 294
+ GT G+ PE + T D++S G V +L+ G+ P S+E+
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248
Query: 295 TGLAAYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
+ F L D++ + + I L ++ ++ + +RPT +V
Sbjct: 249 NIIRGIFSL------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 215 NILLNEKYTA---KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K + T+ T Y+ PE ++ D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTEPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 272 FGVVLVELLTGQKPI 286
GV++ LL G P
Sbjct: 203 LGVIMYILLCGYPPF 217
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
L+V E + G LF + D+ ++ T I + ++ YLHS + I HRD+K
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQA-FTEREASEIXKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 215 NILLNEKYTA---KVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
N+L K K+ DFG +K +TT + Y+ PE ++ D +S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWS 248
Query: 272 FGVVLVELLTGQKPI 286
GV+ LL G P
Sbjct: 249 LGVIXYILLCGYPPF 263
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 40/212 (18%)
Query: 91 LGQGGQGTVYKGMLADGRI---VAVKKSKIVHEGKL--EEFINEVVILSQINHRNVVKLL 145
+G G G V + DGR VA+KK + +L + E+ +L + H NV+ LL
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 146 GCCLETEVP------LLVYEFISN--GTLFQY--LHDQNEEFPLTWEMRLRIATEVAGSL 195
E LV F+ G L ++ L + +F + ++ L
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF---------LVYQMLKGL 141
Query: 196 SYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQG---TFGY 252
Y+H+A I HRD+K N+ +NE K+ DFG ++ +++ G T Y
Sbjct: 142 RYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-------QADSEMXGXVVTRWY 191
Query: 253 LDPEYFRSG-QFTDKSDVYSFGVVLVELLTGQ 283
PE + ++T D++S G ++ E++TG+
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 100/255 (39%), Gaps = 59/255 (23%)
Query: 85 FNVNRILGQGGQGTVYKGMLADGRIVAVKKSKIVHEGKL--------EEFINEVVILSQI 136
+++ +GQG G V + R A++ KI+++ K+ E EV ++ ++
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTR--AIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 137 NHRNVVKLLGCCLETEVPLLVYEFISNGTLFQYL-------------------------- 170
+H N+ +L + + LV E G L L
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 171 ---------HDQNEEFPLTWEMRL--RIATEVAGSLSYLHSAASMPIYHRDIKSTNILL- 218
H E +L I ++ +L YLH+ I HRDIK N L
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFS 202
Query: 219 -NEKYTAKVADFGTSK-FIVIDQTH---VTTKVQGTFGYLDPEYFRSGQ--FTDKSDVYS 271
N+ + K+ DFG SK F ++ +TTK GT ++ PE + + K D +S
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 272 FGVVLVELLTGQKPI 286
GV+L LL G P
Sbjct: 262 AGVLLHLLLMGAVPF 276
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ FG ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%)
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKS 267
HRD+K NIL++ A + DFG + ++ GT Y PE F T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 268 DVYSFGVVLVELLTGQKP 285
D+Y+ VL E LTG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ D G ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ D G ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 91 LGQGGQGTVYKGMLADGRIVA-VKKSKIVHEGKLEEFINEVVILSQINHRNVVKLLGCCL 149
L + G ++KG IV V K + K +F E L +H NV+ +LG C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 150 ETEV--PLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIY 207
P L+ + G+L+ LH + F + ++ A + A ++LH+ + I
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLH-EGTNFVVDQSQAVKFALDXARGXAFLHTLEPL-IP 135
Query: 208 HRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYF-RSGQFTDK 266
+ S ++ ++E TA+++ KF + + ++ PE + + T++
Sbjct: 136 RHALNSRSVXIDEDXTARISX-ADVKF-----SFQSPGRXYAPAWVAPEALQKKPEDTNR 189
Query: 267 --SDVYSFGVVLVELLTGQKPI 286
+D +SF V+L EL+T + P
Sbjct: 190 RSADXWSFAVLLWELVTREVPF 211
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 155 LLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGSLSYLHSAASMPIYHRDIKST 214
+L+ E+ + G +F + E ++ +R+ ++ + YLH I H D+K
Sbjct: 105 ILILEYAAGGEIFSLCLPELAEM-VSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQ 160
Query: 215 NILLNEKYT---AKVADFGTSKFIVIDQTHVTTKVQGTFGYLDPEYFRSGQFTDKSDVYS 271
NILL+ Y K+ DFG S+ I ++ GT YL PE T +D+++
Sbjct: 161 NILLSSIYPLGDIKIVDFGMSR--KIGHACELREIMGTPEYLAPEILNYDPITTATDMWN 218
Query: 272 FGVVLVELLTGQKPIILTGSKE 293
G++ LLT P + ++E
Sbjct: 219 IGIIAYMLLTHTSPFVGEDNQE 240
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 34/224 (15%)
Query: 85 FNVNRILGQGGQGTVYKGML-ADGRIVAVKKSKIVHEGKLE-EFINEVVILSQINHRNVV 142
F + +LG+G G V G IVA+KK + + + E+ IL H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 143 KLLGC----CLETEVPLLVYEFISNGTLF-----QYLHDQNEEFPLTWEMRLRIATEVAG 193
+ E + + + + L Q L D + ++ + +R
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR--------- 123
Query: 194 SLSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFI---VIDQTHVTTKVQG-- 248
++ LH + + HRD+K +N+L+N KV DFG ++ I D + T + G
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 249 ----TFGYLDPE-YFRSGQFTDKSDVYSFGVVLVELLTGQKPII 287
T Y PE S +++ DV+S G +L EL ++PI
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIF 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 91 LGQGGQGTVYKGM-LADGRIVAVKK-----SKIVHEGKLEEFINEVVILSQINHRNVVKL 144
+G G G+V G VAVKK I+H + E+ +L + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMKHENVIGL 86
Query: 145 LGCCLETE----------VPLLVYEFISNGTLFQYLHDQNEEFPLTWEMRLRIATEVAGS 194
L V L+ ++N Q L D + +F + ++
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF---------LIYQILRG 137
Query: 195 LSYLHSAASMPIYHRDIKSTNILLNEKYTAKVADFGTSKFIVIDQTHVTTKVQGTFGYLD 254
L Y+HSA I HRD+K +N+ +NE K+ D G ++ + T GY+
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT----------GYVA 184
Query: 255 PEYFRSGQ-------FTDKSDVYSFGVVLVELLTGQ 283
++R+ + + D++S G ++ ELLTG+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 54/293 (18%)
Query: 89 RILGQGGQGT-VYKGMLADGRIVAVKKSKIVHEGKLEEFIN----EVVILSQI-NHRNVV 142
+ILG G GT V++G GR VAVK+ I +F + E+ +L++ +H NV+
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVI 90
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQN---EEFPLTWEMR-LRIATEVAGSLSYL 198
+ C T+ L + + N L + +N E L E + + ++A +++L
Sbjct: 91 RYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 199 HSAASMPIYHRDIKSTNILL--NEKYTAK-----------VADFGTSKFIVIDQTHVTTK 245
H S+ I HRD+K NIL+ + ++TA ++DFG K + Q
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 246 VQ---GTFGYLDPEYFRSG---QFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLA 298
+ GT G+ PE + T D++S G V +L+ G+ P S+E+ +
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 266
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
F L D++ + + I L ++ ++ + +RPT +V
Sbjct: 267 GIFSL------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 54/293 (18%)
Query: 89 RILGQGGQGT-VYKGMLADGRIVAVKKSKIVHEGKLEEFIN----EVVILSQI-NHRNVV 142
+ILG G GT V++G GR VAVK+ I +F + E+ +L++ +H NV+
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVI 90
Query: 143 KLLGCCLETEVPLLVYEFISNGTLFQYLHDQN---EEFPLTWEMR-LRIATEVAGSLSYL 198
+ C T+ L + + N L + +N E L E + + ++A +++L
Sbjct: 91 RYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 199 HSAASMPIYHRDIKSTNILL--NEKYTAK-----------VADFGTSKFIVIDQTHVTTK 245
H S+ I HRD+K NIL+ + ++TA ++DFG K + Q
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 246 VQ---GTFGYLDPEYFRSG---QFTDKSDVYSFGVVLVELLT-GQKPIILTGSKEATGLA 298
+ GT G+ PE + T D++S G V +L+ G+ P S+E+ +
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 266
Query: 299 AYFILSMEENRLYDFLDDQVLKVGQKEEIMTIATLATRCLNLNGKRRPTMKEV 351
F L D++ + + I L ++ ++ + +RPT +V
Sbjct: 267 GIFSL------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,298,385
Number of Sequences: 62578
Number of extensions: 465159
Number of successful extensions: 3937
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 219
Number of HSP's that attempted gapping in prelim test: 1266
Number of HSP's gapped (non-prelim): 1172
length of query: 400
length of database: 14,973,337
effective HSP length: 101
effective length of query: 299
effective length of database: 8,652,959
effective search space: 2587234741
effective search space used: 2587234741
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)